libmaus2 →
2.0.768+dfsg-1 →
armhf → 2021-03-19 11:05:31
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-04
+==============================================================================+
| libmaus2 2.0.768+dfsg-1 (armhf) Fri, 19 Mar 2021 06:35:07 +0000 |
+==============================================================================+
Package: libmaus2
Version: 2.0.768+dfsg-1
Source Version: 2.0.768+dfsg-1
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-c9795ec5-e797-48c2-8e27-e251ea47086b' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [12.2 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [13.2 MB]
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Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'libmaus2' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/libmaus2.git
Please use:
git clone https://salsa.debian.org/med-team/libmaus2.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 1617 kB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main libmaus2 2.0.768+dfsg-1 (dsc) [2167 B]
Get:2 http://172.17.0.1/private bullseye-staging/main libmaus2 2.0.768+dfsg-1 (tar) [1608 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main libmaus2 2.0.768+dfsg-1 (diff) [6100 B]
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Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/libmaus2-ODQDs8/libmaus2-2.0.768+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/libmaus2-ODQDs8' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-mQDa5V/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-mQDa5V/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-mQDa5V/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-mQDa5V/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-mQDa5V/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-mQDa5V/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-mQDa5V/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-mQDa5V/apt_archive ./ Packages [435 B]
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Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
bsdextrautils libnss-nis libnss-nisplus libpam-cap netbase sensible-utils
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 2 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-mQDa5V/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
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Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12557 files and directories currently installed.)
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Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), d-shlibs, libsecrecy-dev, pkg-config, zlib1g-dev
Filtered Build-Depends: debhelper-compat (= 13), d-shlibs, libsecrecy-dev, pkg-config, zlib1g-dev
dpkg-deb: building package 'sbuild-build-depends-libmaus2-dummy' in '/<<BUILDDIR>>/resolver-mQDa5V/apt_archive/sbuild-build-depends-libmaus2-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-libmaus2-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-mQDa5V/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-mQDa5V/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-mQDa5V/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-mQDa5V/apt_archive ./ Sources [525 B]
Get:5 copy:/<<BUILDDIR>>/resolver-mQDa5V/apt_archive ./ Packages [606 B]
Fetched 2464 B in 1s (3364 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install libmaus2 build dependencies (apt-based resolver)
--------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libnss-nis libnss-nisplus libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev d-shlibs debhelper dh-autoreconf
dh-strip-nondeterminism dwz file gettext gettext-base groff-base
intltool-debian libarchive-zip-perl libassuan-dev libdebhelper-perl libelf1
libfile-stripnondeterminism-perl libglib2.0-0 libgmp-dev libgmpxx4ldbl
libgpg-error-dev libgpgme-dev libgpgme11 libicu67 libmagic-mgc libmagic1
libpipeline1 libsecrecy-dev libsigsegv2 libsub-override-perl libtool
libuchardet0 libxml2 m4 man-db nettle-dev pkg-config po-debconf zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc
libasprintf-dev libgettextpo-dev groff gmp-doc libgmp10-doc libmpfr-dev
libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less
www-browser libmail-box-perl
Recommended packages:
curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
xdg-user-dirs libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev d-shlibs debhelper dh-autoreconf
dh-strip-nondeterminism dwz file gettext gettext-base groff-base
intltool-debian libarchive-zip-perl libassuan-dev libdebhelper-perl libelf1
libfile-stripnondeterminism-perl libglib2.0-0 libgmp-dev libgmpxx4ldbl
libgpg-error-dev libgpgme-dev libgpgme11 libicu67 libmagic-mgc libmagic1
libpipeline1 libsecrecy-dev libsigsegv2 libsub-override-perl libtool
libuchardet0 libxml2 m4 man-db nettle-dev pkg-config po-debconf
sbuild-build-depends-libmaus2-dummy zlib1g-dev
0 upgraded, 42 newly installed, 0 to remove and 2 not upgraded.
Need to get 22.0 MB of archives.
After this operation, 75.7 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-mQDa5V/apt_archive ./ sbuild-build-depends-libmaus2-dummy 0.invalid.0 [896 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-6 [793 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.3-1 [29.9 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.4-2 [1307 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.39-3 [273 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.39-3 [117 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.39-3 [68.0 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.21-4 [171 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.13-1 [34.3 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-5 [186 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-14 [313 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1+nmu1 [77.1 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.3-2 [814 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.21-4 [510 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf d-shlibs all 0.98 [17.9 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 13.3.4 [189 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-15 [513 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.11.0-1 [25.6 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.11.0-1 [15.3 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.183-1 [161 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13+20210201-1 [164 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf libicu67 armhf 67.1-6 [8289 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.10+dfsg-6.3 [580 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.21-4 [1215 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 13.3.4 [1049 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf libgpg-error-dev armhf 1.38-2 [121 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf libassuan-dev armhf 2.5.3-7.1 [104 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.66.7-2 [1183 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf libgmpxx4ldbl armhf 2:6.2.1+dfsg-1 [336 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf libgmp-dev armhf 2:6.2.1+dfsg-1 [583 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf libgpgme11 armhf 1.14.0-1+b1 [259 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf libgpgme-dev armhf 1.14.0-1+b1 [453 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf pkg-config armhf 0.29.2-1 [61.5 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf nettle-dev armhf 3.7-2.1 [1262 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf libsecrecy-dev armhf 0.0.2+dfsg-2 [20.5 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [184 kB]
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Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-2) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up libelf1:armhf (0.183-1) ...
Setting up libxml2:armhf (2.9.10+dfsg-6.3) ...
Setting up libfile-stripnondeterminism-perl (1.11.0-1) ...
Setting up gettext (0.21-4) ...
Setting up libgmp-dev:armhf (2:6.2.1+dfsg-1) ...
Setting up nettle-dev:armhf (3.7-2.1) ...
Setting up libtool (2.4.6-15) ...
Setting up m4 (1.4.18-5) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up autoconf (2.69-14) ...
Setting up dh-strip-nondeterminism (1.11.0-1) ...
Setting up dwz (0.13+20210201-1) ...
Setting up groff-base (1.22.4-6) ...
Setting up libsecrecy-dev:armhf (0.0.2+dfsg-2) ...
Setting up automake (1:1.16.3-2) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up po-debconf (1.0.21+nmu1) ...
Setting up man-db (2.9.4-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up dh-autoreconf (20) ...
Setting up debhelper (13.3.4) ...
Setting up sbuild-build-depends-libmaus2-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.31-9+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.4-armmp armhf (armv7l)
Toolchain package versions: binutils_2.35.2-2+rpi1 dpkg-dev_1.20.7.1+rpi1 g++-10_10.2.1-6+rpi1 gcc-10_10.2.1-6+rpi1 libc6-dev_2.31-9+rpi1 libstdc++-10-dev_10.2.1-6+rpi1 libstdc++6_10.2.1-6+rpi1 linux-libc-dev_5.10.19-1+rpi1
Package versions: adduser_3.118 apt_2.2.2 autoconf_2.69-14 automake_1:1.16.3-2 autopoint_0.21-4 autotools-dev_20180224.1+nmu1 base-files_11+rpi1 base-passwd_3.5.49 bash_5.1-2 binutils_2.35.2-2+rpi1 binutils-arm-linux-gnueabihf_2.35.2-2+rpi1 binutils-common_2.35.2-2+rpi1 bsdextrautils_2.36.1-7 bsdutils_1:2.36.1-7 build-essential_12.9 bzip2_1.0.8-4 coreutils_8.32-4 cpp_4:10.2.1-1+rpi1 cpp-10_10.2.1-6+rpi1 d-shlibs_0.98 dash_0.5.11+git20200708+dd9ef66-5 debconf_1.5.75 debhelper_13.3.4 debianutils_4.11.2 dh-autoreconf_20 dh-strip-nondeterminism_1.11.0-1 diffutils_1:3.7-5 dirmngr_2.2.27-1 dpkg_1.20.7.1+rpi1 dpkg-dev_1.20.7.1+rpi1 dwz_0.13+20210201-1 e2fsprogs_1.46.2-1 fakeroot_1.25.3-1.1 fdisk_2.36.1-7 file_1:5.39-3 findutils_4.8.0-1 g++_4:10.2.1-1+rpi1 g++-10_10.2.1-6+rpi1 gcc_4:10.2.1-1+rpi1 gcc-10_10.2.1-6+rpi1 gcc-10-base_10.2.1-6+rpi1 gettext_0.21-4 gettext-base_0.21-4 gnupg_2.2.27-1 gnupg-l10n_2.2.27-1 gnupg-utils_2.2.27-1 gpg_2.2.27-1 gpg-agent_2.2.27-1 gpg-wks-client_2.2.27-1 gpg-wks-server_2.2.27-1 gpgconf_2.2.27-1 gpgsm_2.2.27-1 gpgv_2.2.27-1 grep_3.6-1 groff-base_1.22.4-6 gzip_1.10-4 hostname_3.23 init-system-helpers_1.60 intltool-debian_0.35.0+20060710.5 iputils-ping_3:20210202-1 libacl1_2.2.53-10 libapt-pkg6.0_2.2.2 libarchive-zip-perl_1.68-1 libasan6_10.2.1-6+rpi1 libassuan-dev_2.5.3-7.1 libassuan0_2.5.3-7.1 libatomic1_10.2.1-6+rpi1 libattr1_1:2.4.48-6 libaudit-common_1:3.0-2 libaudit1_1:3.0-2 libbinutils_2.35.2-2+rpi1 libblkid1_2.36.1-7 libbz2-1.0_1.0.8-4 libc-bin_2.31-9+rpi1 libc-dev-bin_2.31-9+rpi1 libc6_2.31-9+rpi1 libc6-dev_2.31-9+rpi1 libcap-ng0_0.7.9-2.2+b1 libcap2_1:2.44-1 libcap2-bin_1:2.44-1 libcc1-0_10.2.1-6+rpi1 libcom-err2_1.46.2-1 libcrypt-dev_1:4.4.17-1 libcrypt1_1:4.4.17-1 libctf-nobfd0_2.35.2-2+rpi1 libctf0_2.35.2-2+rpi1 libdb5.3_5.3.28+dfsg1-0.8 libdebconfclient0_0.256 libdebhelper-perl_13.3.4 libdpkg-perl_1.20.7.1+rpi1 libelf1_0.183-1 libext2fs2_1.46.2-1 libfakeroot_1.25.3-1.1 libfdisk1_2.36.1-7 libffi7_3.3-6 libfile-stripnondeterminism-perl_1.11.0-1 libgcc-10-dev_10.2.1-6+rpi1 libgcc-s1_10.2.1-6+rpi1 libgcrypt20_1.8.7-3 libgdbm-compat4_1.19-2 libgdbm6_1.19-2 libglib2.0-0_2.66.7-2 libgmp-dev_2:6.2.1+dfsg-1 libgmp10_2:6.2.1+dfsg-1 libgmpxx4ldbl_2:6.2.1+dfsg-1 libgnutls30_3.7.0-7 libgomp1_10.2.1-6+rpi1 libgpg-error-dev_1.38-2 libgpg-error0_1.38-2 libgpgme-dev_1.14.0-1+b1 libgpgme11_1.14.0-1+b1 libgssapi-krb5-2_1.18.3-4 libhogweed6_3.7-2.1 libicu67_67.1-6 libidn2-0_2.3.0-5 libisl23_0.23-1 libk5crypto3_1.18.3-4 libkeyutils1_1.6.1-2 libkrb5-3_1.18.3-4 libkrb5support0_1.18.3-4 libksba8_1.5.0-3 libldap-2.4-2_2.4.57+dfsg-1 libldap-common_2.4.57+dfsg-2 liblz4-1_1.9.3-1+rpi1 liblzma5_5.2.5-1.0 libmagic-mgc_1:5.39-3 libmagic1_1:5.39-3 libmount1_2.36.1-7 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libncursesw6_6.2+20201114-2 libnettle8_3.7-2.1 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnss-nis_3.1-4 libnss-nisplus_1.3-4 libp11-kit0_0.23.22-1 libpam-cap_1:2.44-1 libpam-modules_1.4.0-6 libpam-modules-bin_1.4.0-6 libpam-runtime_1.4.0-6 libpam0g_1.4.0-6 libpcre2-8-0_10.36-2 libpcre3_2:8.39-13 libperl5.32_5.32.1-3 libpipeline1_1.5.3-1 libreadline8_8.1-1 libsasl2-2_2.1.27+dfsg-2.1 libsasl2-modules-db_2.1.27+dfsg-2.1 libseccomp2_2.5.1-1+rpi1 libsecrecy-dev_0.0.2+dfsg-2 libselinux1_3.1-3 libsemanage-common_3.1-1 libsemanage1_3.1-1+b1 libsepol1_3.1-1 libsigsegv2_2.13-1 libsmartcols1_2.36.1-7 libsqlite3-0_3.34.1-3 libss2_1.46.2-1 libssl1.1_1.1.1j-1 libstdc++-10-dev_10.2.1-6+rpi1 libstdc++6_10.2.1-6+rpi1 libsub-override-perl_0.09-2 libsystemd0_247.3-1+rpi1 libtasn1-6_4.16.0-2 libtinfo6_6.2+20201114-2 libtirpc-common_1.3.1-1 libtirpc-dev_1.3.1-1 libtirpc3_1.3.1-1 libtool_2.4.6-15 libubsan1_10.2.1-6+rpi1 libuchardet0_0.0.7-1 libudev1_247.3-1+rpi1 libunistring2_0.9.10-4 libuuid1_2.36.1-7 libxml2_2.9.10+dfsg-6.3 libxxhash0_0.8.0-2+rpi1 libzstd1_1.4.8+dfsg-2 linux-libc-dev_5.10.19-1+rpi1 login_1:4.8.1-1 logsave_1.46.2-1 lsb-base_11.1.0+rpi1 m4_1.4.18-5 make_4.3-4 man-db_2.9.4-2 mawk_1.3.4.20200120-2 mount_2.36.1-7 ncurses-base_6.2+20201114-2 ncurses-bin_6.2+20201114-2 netbase_6.2 nettle-dev_3.7-2.1 passwd_1:4.8.1-1 patch_2.7.6-7 perl_5.32.1-3 perl-base_5.32.1-3 perl-modules-5.32_5.32.1-3 pinentry-curses_1.1.0-4 pkg-config_0.29.2-1 po-debconf_1.0.21+nmu1 raspbian-archive-keyring_20120528.2 readline-common_8.1-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-libmaus2-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.14 sysvinit-utils_2.96-6 tar_1.34+dfsg-1 tzdata_2021a-1 util-linux_2.36.1-7 xz-utils_5.2.5-1.0 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.jaji4OX1/trustedkeys.kbx': General error
gpgv: Signature made Sat Jan 2 20:51:04 2021 UTC
gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./libmaus2_2.0.768+dfsg-1.dsc
dpkg-source: info: extracting libmaus2 in /<<BUILDDIR>>/libmaus2-2.0.768+dfsg
dpkg-source: info: unpacking libmaus2_2.0.768+dfsg.orig.tar.xz
dpkg-source: info: unpacking libmaus2_2.0.768+dfsg-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying spelling-error-in-header.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-c9795ec5-e797-48c2-8e27-e251ea47086b
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package libmaus2
dpkg-buildpackage: info: source version 2.0.768+dfsg-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean
dh_clean
debian/rules binary-arch
dh binary-arch
dh_update_autotools_config -a
dh_autoreconf -a
libtoolize: putting auxiliary files in '.'.
libtoolize: copying file './ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
configure.ac:6: installing './compile'
configure.ac:4: installing './config.guess'
configure.ac:4: installing './config.sub'
configure.ac:8: installing './install-sh'
configure.ac:8: installing './missing'
Makefile.am: installing './INSTALL'
src/Makefile.am: installing './depcomp'
parallel-tests: installing './test-driver'
dh_auto_configure -a
./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking
configure: Configuring for source in directory .
checking build system type... arm-unknown-linux-gnueabihf
checking host system type... arm-unknown-linux-gnueabihf
checking target system type... arm-unknown-linux-gnueabihf
checking how to print strings... printf
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop
checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking for gawk... no
checking for mawk... mawk
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... no
checking if : is a manifest tool... no
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking whether make sets $(MAKE)... yes
checking whether make supports the include directive... yes (GNU style)
checking whether make supports nested variables... yes
checking how to create a pax tar archive... gnutar
checking dependency style of gcc... none
checking whether we are cross compiling... no
checking for bash... /bin/bash
checking for base64... /usr/bin/base64
checking for gcc... (cached) gcc
checking whether we are using the GNU C compiler... (cached) yes
checking whether gcc accepts -g... (cached) yes
checking for gcc option to accept ISO C89... (cached) none needed
checking whether gcc understands -c and -o together... (cached) yes
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking how to run the C++ preprocessor... g++ -E
checking for ld used by g++... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking for g++ option to produce PIC... -fPIC -DPIC
checking if g++ PIC flag -fPIC -DPIC works... yes
checking if g++ static flag -static works... yes
checking if g++ supports -c -o file.o... yes
checking if g++ supports -c -o file.o... (cached) yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking dependency style of g++... none
checking whether host cpu is x86_64... no
checking whether host os is GNU/Linux... no
checking whether we are compiling for x86_64 CPU on GNU/Linux OS ... no
checking size of unsigned long... 4
checking winsock2.h usability... no
checking winsock2.h presence... no
checking for winsock2.h... no
checking ws2tcpip.h usability... no
checking ws2tcpip.h presence... no
checking for ws2tcpip.h... no
checking sys/wait.h usability... yes
checking sys/wait.h presence... yes
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checking sys/ioctl.h usability... yes
checking sys/ioctl.h presence... yes
checking for sys/ioctl.h... yes
checking execinfo.h usability... yes
checking execinfo.h presence... yes
checking for execinfo.h... yes
checking windows.h usability... no
checking windows.h presence... no
checking for windows.h... no
checking for unistd.h... (cached) yes
checking linux/sysctl.h usability... yes
checking linux/sysctl.h presence... yes
checking for linux/sysctl.h... yes
checking features.h usability... yes
checking features.h presence... yes
checking for features.h... yes
checking for dlfcn.h... (cached) yes
checking sys/prctl.h usability... yes
checking sys/prctl.h presence... yes
checking for sys/prctl.h... yes
checking libunwind.h usability... no
checking libunwind.h presence... no
checking for libunwind.h... no
checking for unw_backtrace in -lunwind... no
checking for pkg-config... /usr/bin/pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for zlib >= 0... yes
checking for libcurl >= 7.47.0... no
checking for zlib >= 0... yes
checking whether we can compile a zlib program... yes
checking snappy.h usability... no
checking snappy.h presence... no
checking for snappy.h... no
checking libdeflate.h usability... no
checking libdeflate.h presence... no
checking for libdeflate.h... no
checking for GetProcessMemoryInfo... no
checking for dlopen... no
checking for dlerror... no
checking for dlsym... no
checking for dlclose... no
checking for dlopen in -ldl... yes
checking for dlerror in -ldl... yes
checking for dlsym in -ldl... yes
checking for dlclose in -ldl... yes
checking whether we found the dlopen function anywhere... yes
checking whether we found the dlerror function anywhere... yes
checking whether we found the dlsym function anywhere... yes
checking whether we found the dlclose function anywhere... yes
checking whether we found all the functions required for dynamic modules somewhere... yes
checking whether we need the dl library for any of the dl functions... yes
checking for backtrace... yes
checking for gethostname... yes
checking for fsync... yes
checking for dup2... yes
checking for execv... yes
checking for mkstemp... yes
checking for fcntl... yes
checking for pipe... yes
checking for fork... yes
checking for symlink... yes
checking for waitpid... yes
checking for gethostbyname... yes
checking for gethostbyname2... yes
checking for prctl... yes
checking whether SIGPIPE exists... yes
checking whether SIGHUP exists... yes
checking whether pid_t exists... yes
checking whether getpid exists... yes
checking whether O_RDONLY... yes
checking whether O_WRONLY... yes
checking whether O_RDWR... yes
checking whether O_CREAT... yes
checking whether O_TRUNC... yes
checking whether OFF_T... yes
checking whether lseek function exists... yes
checking whether read function exists... yes
checking whether fstat function exists... yes
checking whether stat function exists... yes
checking whether fstatfs function exists... yes
checking whether sysconf function exists... yes
checking whether write function exists... yes
checking whether WIFEXITED exists... yes
checking whether WEXITSTATUS exists... yes
checking whether the C++ compiler supports the -std=c++17 flag... yes
checking whether the C++ compiler supports the -msse4 flag... no
checking whether the C++ compiler supports the -msse2 flag... no
checking whether the C++ compiler supports the -mssse3 flag... no
checking whether the C++ compiler supports the -msse4.1 flag... no
checking whether the C++ compiler supports the -mavx flag... no
checking whether the C++ compiler supports the -mavx2 flag... no
checking smmintrin.h usability... no
checking smmintrin.h presence... no
checking for smmintrin.h... no
checking immintrin.h usability... no
checking immintrin.h presence... no
checking for immintrin.h... no
checking whether the C++ compiler supports __builtin_cpu_supports... no
checking whether the C++ compiler supports all intrinsics required for SIMD global alignment (X128/8 variant)... no
checking whether the C++ compiler supports all intrinsics required for SIMD global alignment (X128/16 variant)... no
checking whether the C++ compiler supports all intrinsics required for SIMD global alignment (Y256/8 variant)... no
checking whether the C++ compiler supports all intrinsics required for SIMD global alignment (Y256/16 variant)... no
checking whether the C++ compiler supports all intrinsics required for one to many global alignment using AVX2... no
checking cstdint usability... yes
checking cstdint presence... yes
checking for cstdint... yes
checking whether the C++ compiler supports the -msse4 flag... no
checking for open with 2 arguments... yes
checking for open with 3 arguments... yes
checking for close... yes
checking for O_NONBLOCK... yes
checking for O_LARGEFILE... yes
checking for O_BINARY... no
checking for ssize_t... yes
checking for socklen_t... yes
checking whether the C++ compiler supports the -W flag... yes
checking whether the C++ compiler supports the -Wall flag... yes
checking whether the C++ compiler supports the -Wnon-virtual-dtor flag... yes
checking for OpenMP flag of C++ compiler... -fopenmp
checking whether the C++ compiler supports the -rdynamic flag... yes
checking whether std::unique_ptr exists... yes
checking whether std::shared_ptr exists... yes
checking whether std::unordered_map exists... yes
checking whether std::unordered_set exists... yes
checking whether std::move exists... yes
checking whether byte ordering is bigendian... no
checking for psapi.h... no
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking libgen.h usability... yes
checking libgen.h presence... yes
checking for libgen.h... yes
checking for sys/stat.h... (cached) yes
checking for sys/types.h... (cached) yes
checking sys/vfs.h usability... yes
checking sys/vfs.h presence... yes
checking for sys/vfs.h... yes
checking whether we can compile a program using statfs... yes
checking whether struct statfs has field f_iosize... no
checking whether struct statfs has field f_bsize... yes
checking whether the C++ compiler supports the -pthread flag... yes
checking whether getpagesize is present... yes
checking for unsigned __int128... no
checking whether we can compile a program using the gmp library... yes
checking for libsecrecy >= 0.0.0... yes
checking whether we can compile a libsecrecy program... yes
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... 64
checking for _LARGEFILE_SOURCE value needed for large files... no
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating libmaus2.pc
config.status: creating ubuntu.sh
config.status: creating src/libmaus2/LibMausConfig.hpp
config.status: creating test/Makefile
config.status: creating config.h
config.status: executing libtool commands
config.status: executing depfiles commands
dh_auto_build -a
make -j4
make[1]: Entering directory '/<<BUILDDIR>>/libmaus2-2.0.768+dfsg'
make all-recursive
make[2]: Entering directory '/<<BUILDDIR>>/libmaus2-2.0.768+dfsg'
Making all in src
make[3]: Entering directory '/<<BUILDDIR>>/libmaus2-2.0.768+dfsg/src'
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fastx/la-Phred.lo `test -f 'libmaus2/fastx/Phred.cpp' || echo './'`libmaus2/fastx/Phred.cpp
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-BamAlignmentDecoderBase.lo `test -f 'libmaus2/bambam/BamAlignmentDecoderBase.cpp' || echo './'`libmaus2/bambam/BamAlignmentDecoderBase.cpp
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-StrCmpNum.lo `test -f 'libmaus2/bambam/StrCmpNum.cpp' || echo './'`libmaus2/bambam/StrCmpNum.cpp
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-TempFileNameGenerator.lo `test -f 'libmaus2/util/TempFileNameGenerator.cpp' || echo './'`libmaus2/util/TempFileNameGenerator.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/Phred.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-Phred.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamAlignmentDecoderBase.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamAlignmentDecoderBase.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/StrCmpNum.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-StrCmpNum.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/TempFileNameGenerator.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-TempFileNameGenerator.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/Phred.cpp -o libmaus2/fastx/la-Phred.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-TempFileNameGeneratorState.lo `test -f 'libmaus2/util/TempFileNameGeneratorState.cpp' || echo './'`libmaus2/util/TempFileNameGeneratorState.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/StrCmpNum.cpp -o libmaus2/bambam/la-StrCmpNum.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/TempFileNameGeneratorState.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-TempFileNameGeneratorState.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-ArgInfo.lo `test -f 'libmaus2/util/ArgInfo.cpp' || echo './'`libmaus2/util/ArgInfo.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/ArgInfo.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-ArgInfo.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/TempFileNameGenerator.cpp -o libmaus2/util/la-TempFileNameGenerator.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-BitList.lo `test -f 'libmaus2/util/BitList.cpp' || echo './'`libmaus2/util/BitList.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/BitList.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-BitList.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/ArgInfo.cpp -o libmaus2/util/la-ArgInfo.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/BitList.cpp -o libmaus2/util/la-BitList.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-VarBitList.lo `test -f 'libmaus2/util/VarBitList.cpp' || echo './'`libmaus2/util/VarBitList.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/VarBitList.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-VarBitList.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/VarBitList.cpp -o libmaus2/util/la-VarBitList.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-Concat.lo `test -f 'libmaus2/util/Concat.cpp' || echo './'`libmaus2/util/Concat.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Concat.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Concat.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamAlignmentDecoderBase.cpp -o libmaus2/bambam/la-BamAlignmentDecoderBase.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-ConcatRequest.lo `test -f 'libmaus2/util/ConcatRequest.cpp' || echo './'`libmaus2/util/ConcatRequest.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/ConcatRequest.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-ConcatRequest.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Concat.cpp -o libmaus2/util/la-Concat.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/ConcatRequest.cpp -o libmaus2/util/la-ConcatRequest.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-ConsoleColor.lo `test -f 'libmaus2/util/ConsoleColor.cpp' || echo './'`libmaus2/util/ConsoleColor.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/ConsoleColor.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-ConsoleColor.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/TempFileNameGeneratorState.cpp -o libmaus2/util/la-TempFileNameGeneratorState.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/ConsoleColor.cpp -o libmaus2/util/la-ConsoleColor.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-DynamicLoading.lo `test -f 'libmaus2/util/DynamicLoading.cpp' || echo './'`libmaus2/util/DynamicLoading.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/DynamicLoading.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-DynamicLoading.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-GetFileSize.lo `test -f 'libmaus2/util/GetFileSize.cpp' || echo './'`libmaus2/util/GetFileSize.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/GetFileSize.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-GetFileSize.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/DynamicLoading.cpp -o libmaus2/util/la-DynamicLoading.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-Histogram.lo `test -f 'libmaus2/util/Histogram.cpp' || echo './'`libmaus2/util/Histogram.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Histogram.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Histogram.o
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/Histogram.hpp:23,
from libmaus2/util/Histogram.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/Histogram.hpp:23,
from libmaus2/util/Histogram.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-HistogramSet.lo `test -f 'libmaus2/util/HistogramSet.cpp' || echo './'`libmaus2/util/HistogramSet.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/HistogramSet.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-HistogramSet.o
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/util/Histogram.hpp:23,
from libmaus2/util/Histogram.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/util/Histogram.hpp:23,
from libmaus2/util/Histogram.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘std::vector<long long unsigned int> libmaus2::util::Histogram::getKeyVector()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/util/Histogram.hpp:23,
from libmaus2/util/Histogram.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/Histogram.hpp:23,
from libmaus2/util/Histogram.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1662 | __heap_select(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1937:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1937 | std::__heap_select(__first, __middle, __last, __comp);
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/util/Histogram.hpp:23,
from libmaus2/util/Histogram.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<std::pair<long long unsigned int, long long unsigned int> > libmaus2::util::Histogram::getFreqSymVector()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/Histogram.hpp:23,
from libmaus2/util/Histogram.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Histogram.cpp -o libmaus2/util/la-Histogram.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/HistogramSet.cpp -o libmaus2/util/la-HistogramSet.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-IncreasingList.lo `test -f 'libmaus2/util/IncreasingList.cpp' || echo './'`libmaus2/util/IncreasingList.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/IncreasingList.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-IncreasingList.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-IntervalTree.lo `test -f 'libmaus2/util/IntervalTree.cpp' || echo './'`libmaus2/util/IntervalTree.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/IntervalTree.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-IntervalTree.o
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/IncreasingList.hpp:23,
from libmaus2/util/IncreasingList.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/IncreasingList.hpp:23,
from libmaus2/util/IncreasingList.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/IntervalTree.cpp -o libmaus2/util/la-IntervalTree.o >/dev/null 2>&1
/usr/include/c++/10/bits/stl_algo.h: In static member function ‘static void libmaus2::util::IncreasingList::test(const std::vector<long long unsigned int>&)’:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/IncreasingList.cpp -o libmaus2/util/la-IncreasingList.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/GenericIntervalTree.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-GenericIntervalTree.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/LookupIntervalTree.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-LookupIntervalTree.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/md5_interface.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-md5_interface.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/GetFileSize.cpp -o libmaus2/util/la-GetFileSize.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/GenericIntervalTree.cpp -o libmaus2/util/la-GenericIntervalTree.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/LookupIntervalTree.cpp -o libmaus2/util/la-LookupIntervalTree.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/md5_interface.cpp -o libmaus2/digest/la-md5_interface.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/MemUsage.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-MemUsage.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/nstat.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-nstat.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/SaturatingCounter.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-SaturatingCounter.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/nstat.cpp -o libmaus2/util/la-nstat.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/StringSerialisation.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-StringSerialisation.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/MemUsage.cpp -o libmaus2/util/la-MemUsage.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/SaturatingCounter.cpp -o libmaus2/util/la-SaturatingCounter.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/SuccinctBorderArray.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-SuccinctBorderArray.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/StringSerialisation.cpp -o libmaus2/util/la-StringSerialisation.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/SuccinctBorderArray.cpp -o libmaus2/util/la-SuccinctBorderArray.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Terminal.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Terminal.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Terminal.cpp -o libmaus2/util/la-Terminal.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-OctetString.lo `test -f 'libmaus2/util/OctetString.cpp' || echo './'`libmaus2/util/OctetString.cpp
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-Utf8String.lo `test -f 'libmaus2/util/Utf8String.cpp' || echo './'`libmaus2/util/Utf8String.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/OctetString.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-OctetString.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Utf8String.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Utf8String.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-Utf8BlockIndexDecoder.lo `test -f 'libmaus2/util/Utf8BlockIndexDecoder.cpp' || echo './'`libmaus2/util/Utf8BlockIndexDecoder.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Utf8BlockIndexDecoder.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Utf8BlockIndexDecoder.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Utf8BlockIndexDecoder.cpp -o libmaus2/util/la-Utf8BlockIndexDecoder.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-Utf8BlockIndex.lo `test -f 'libmaus2/util/Utf8BlockIndex.cpp' || echo './'`libmaus2/util/Utf8BlockIndex.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Utf8BlockIndex.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Utf8BlockIndex.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-Utf8DecoderBuffer.lo `test -f 'libmaus2/util/Utf8DecoderBuffer.cpp' || echo './'`libmaus2/util/Utf8DecoderBuffer.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Utf8DecoderBuffer.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Utf8DecoderBuffer.o
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/GetFileSize.hpp:23,
from ./libmaus2/util/Utf8BlockIndex.hpp:22,
from libmaus2/util/Utf8BlockIndex.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/GetFileSize.hpp:23,
from ./libmaus2/util/Utf8BlockIndex.hpp:22,
from libmaus2/util/Utf8BlockIndex.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static libmaus2::util::Utf8BlockIndex::unique_ptr_type libmaus2::util::Utf8BlockIndex::constructFromUtf8File(const string&, uint64_t, uint64_t)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Utf8DecoderBuffer.cpp -o libmaus2/util/la-Utf8DecoderBuffer.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Utf8BlockIndex.cpp -o libmaus2/util/la-Utf8BlockIndex.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/OctetString.cpp -o libmaus2/util/la-OctetString.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-Utf8DecoderWrapper.lo `test -f 'libmaus2/util/Utf8DecoderWrapper.cpp' || echo './'`libmaus2/util/Utf8DecoderWrapper.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Utf8DecoderWrapper.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Utf8DecoderWrapper.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-AlignmentValidity.lo `test -f 'libmaus2/bambam/AlignmentValidity.cpp' || echo './'`libmaus2/bambam/AlignmentValidity.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/AlignmentValidity.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-AlignmentValidity.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/AlignmentValidity.cpp -o libmaus2/bambam/la-AlignmentValidity.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamFlagBase.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamFlagBase.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/Utf8DecoderWrapper.cpp -o libmaus2/util/la-Utf8DecoderWrapper.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamFlagBase.cpp -o libmaus2/bambam/la-BamFlagBase.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/DuplicationMetrics.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-DuplicationMetrics.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/ReadGroup.cpp -o libmaus2/bambam/la-ReadGroup.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/DuplicationMetrics.cpp -o libmaus2/bambam/la-DuplicationMetrics.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-BamDefaultAdapters.lo `test -f 'libmaus2/bambam/BamDefaultAdapters.cpp' || echo './'`libmaus2/bambam/BamDefaultAdapters.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamDefaultAdapters.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamDefaultAdapters.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamDefaultAdapters.cpp -o libmaus2/bambam/la-BamDefaultAdapters.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-BamRange.lo `test -f 'libmaus2/bambam/BamRange.cpp' || echo './'`libmaus2/bambam/BamRange.cpp
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-BamIndexBinChunk.lo `test -f 'libmaus2/bambam/BamIndexBinChunk.cpp' || echo './'`libmaus2/bambam/BamIndexBinChunk.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamRange.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamRange.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamIndexBinChunk.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamIndexBinChunk.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-BamIndexLinearChunk.lo `test -f 'libmaus2/bambam/BamIndexLinearChunk.cpp' || echo './'`libmaus2/bambam/BamIndexLinearChunk.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamIndexLinearChunk.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamIndexLinearChunk.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamIndexBinChunk.cpp -o libmaus2/bambam/la-BamIndexBinChunk.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamIndexLinearChunk.cpp -o libmaus2/bambam/la-BamIndexLinearChunk.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/huffman/la-HuffmanTree.lo `test -f 'libmaus2/huffman/HuffmanTree.cpp' || echo './'`libmaus2/huffman/HuffmanTree.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/huffman/HuffmanTree.cpp -fPIC -DPIC -o libmaus2/huffman/.libs/la-HuffmanTree.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-BamAlignmentDecoderInfo.lo `test -f 'libmaus2/bambam/BamAlignmentDecoderInfo.cpp' || echo './'`libmaus2/bambam/BamAlignmentDecoderInfo.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamAlignmentDecoderInfo.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamAlignmentDecoderInfo.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamAlignmentDecoderInfo.cpp -o libmaus2/bambam/la-BamAlignmentDecoderInfo.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/huffman/HuffmanTree.cpp -o libmaus2/huffman/la-HuffmanTree.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lz/la-Lz4Base.lo `test -f 'libmaus2/lz/Lz4Base.cpp' || echo './'`libmaus2/lz/Lz4Base.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lz/Lz4Base.cpp -fPIC -DPIC -o libmaus2/lz/.libs/la-Lz4Base.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lz/Lz4Base.cpp -o libmaus2/lz/la-Lz4Base.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lz/la-Lz4Compress.lo `test -f 'libmaus2/lz/Lz4Compress.cpp' || echo './'`libmaus2/lz/Lz4Compress.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lz/Lz4Compress.cpp -fPIC -DPIC -o libmaus2/lz/.libs/la-Lz4Compress.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lz/la-Lz4DecoderBuffer.lo `test -f 'libmaus2/lz/Lz4DecoderBuffer.cpp' || echo './'`libmaus2/lz/Lz4DecoderBuffer.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lz/Lz4DecoderBuffer.cpp -fPIC -DPIC -o libmaus2/lz/.libs/la-Lz4DecoderBuffer.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamRange.cpp -o libmaus2/bambam/la-BamRange.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lz/Lz4Compress.cpp -o libmaus2/lz/la-Lz4Compress.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lz/Lz4DecoderBuffer.cpp -o libmaus2/lz/la-Lz4DecoderBuffer.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -fopenmp -c -o libmaus2/lz/la-lz4.lo `test -f 'libmaus2/lz/lz4.c' || echo './'`libmaus2/lz/lz4.c
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -fopenmp -c libmaus2/lz/lz4.c -fPIC -DPIC -o libmaus2/lz/.libs/la-lz4.o
cc1: warning: command-line option ‘-std=c++17’ is valid for C++/ObjC++ but not for C
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fm/la-BidirectionalIndexInterval.lo `test -f 'libmaus2/fm/BidirectionalIndexInterval.cpp' || echo './'`libmaus2/fm/BidirectionalIndexInterval.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fm/BidirectionalIndexInterval.cpp -fPIC -DPIC -o libmaus2/fm/.libs/la-BidirectionalIndexInterval.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fm/la-BidirectionalIndexIntervalSymbol.lo `test -f 'libmaus2/fm/BidirectionalIndexIntervalSymbol.cpp' || echo './'`libmaus2/fm/BidirectionalIndexIntervalSymbol.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fm/BidirectionalIndexIntervalSymbol.cpp -fPIC -DPIC -o libmaus2/fm/.libs/la-BidirectionalIndexIntervalSymbol.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fm/BidirectionalIndexInterval.cpp -o libmaus2/fm/la-BidirectionalIndexInterval.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fm/BidirectionalIndexIntervalSymbol.cpp -o libmaus2/fm/la-BidirectionalIndexIntervalSymbol.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fastx/la-FastALineParserLineInfo.lo `test -f 'libmaus2/fastx/FastALineParserLineInfo.cpp' || echo './'`libmaus2/fastx/FastALineParserLineInfo.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/FastALineParserLineInfo.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-FastALineParserLineInfo.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fastx/la-FastAMatchTable.lo `test -f 'libmaus2/fastx/FastAMatchTable.cpp' || echo './'`libmaus2/fastx/FastAMatchTable.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/FastAMatchTable.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-FastAMatchTable.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/FastALineParserLineInfo.cpp -o libmaus2/fastx/la-FastALineParserLineInfo.o >/dev/null 2>&1
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -fopenmp -c libmaus2/lz/lz4.c -o libmaus2/lz/la-lz4.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/FastAMatchTable.cpp -o libmaus2/fastx/la-FastAMatchTable.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fastx/la-FastABgzfIndexEntry.lo `test -f 'libmaus2/fastx/FastABgzfIndexEntry.cpp' || echo './'`libmaus2/fastx/FastABgzfIndexEntry.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/FastABgzfIndexEntry.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-FastABgzfIndexEntry.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fastx/la-FastABgzfIndex.lo `test -f 'libmaus2/fastx/FastABgzfIndex.cpp' || echo './'`libmaus2/fastx/FastABgzfIndex.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/FastABgzfIndex.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-FastABgzfIndex.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fastx/la-FastAIndexEntry.lo `test -f 'libmaus2/fastx/FastAIndexEntry.cpp' || echo './'`libmaus2/fastx/FastAIndexEntry.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/FastAIndexEntry.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-FastAIndexEntry.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/FastABgzfIndexEntry.cpp -o libmaus2/fastx/la-FastABgzfIndexEntry.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/FastAIndexEntry.cpp -o libmaus2/fastx/la-FastAIndexEntry.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fastx/la-FastAIndex.lo `test -f 'libmaus2/fastx/FastAIndex.cpp' || echo './'`libmaus2/fastx/FastAIndex.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/FastAIndex.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-FastAIndex.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/la-LocalBaseConstants.lo `test -f 'libmaus2/lcs/LocalBaseConstants.cpp' || echo './'`libmaus2/lcs/LocalBaseConstants.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/LocalBaseConstants.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-LocalBaseConstants.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/FastABgzfIndex.cpp -o libmaus2/fastx/la-FastABgzfIndex.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/LocalBaseConstants.cpp -o libmaus2/lcs/la-LocalBaseConstants.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/la-LocalEditDistanceResult.lo `test -f 'libmaus2/lcs/LocalEditDistanceResult.cpp' || echo './'`libmaus2/lcs/LocalEditDistanceResult.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/LocalEditDistanceResult.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-LocalEditDistanceResult.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-BamHeaderParserStateBase.lo `test -f 'libmaus2/bambam/BamHeaderParserStateBase.cpp' || echo './'`libmaus2/bambam/BamHeaderParserStateBase.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamHeaderParserStateBase.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamHeaderParserStateBase.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/LocalEditDistanceResult.cpp -o libmaus2/lcs/la-LocalEditDistanceResult.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-GeneFlatFile.lo `test -f 'libmaus2/bambam/GeneFlatFile.cpp' || echo './'`libmaus2/bambam/GeneFlatFile.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/GeneFlatFile.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-GeneFlatFile.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-GeneFlatFileEntry.lo `test -f 'libmaus2/bambam/GeneFlatFileEntry.cpp' || echo './'`libmaus2/bambam/GeneFlatFileEntry.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/GeneFlatFileEntry.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-GeneFlatFileEntry.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/FastAIndex.cpp -o libmaus2/fastx/la-FastAIndex.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/GeneFlatFileEntry.cpp -o libmaus2/bambam/la-GeneFlatFileEntry.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-BamStreamingMarkDuplicatesSupport.lo `test -f 'libmaus2/bambam/BamStreamingMarkDuplicatesSupport.cpp' || echo './'`libmaus2/bambam/BamStreamingMarkDuplicatesSupport.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamStreamingMarkDuplicatesSupport.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamStreamingMarkDuplicatesSupport.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/GeneFlatFile.cpp -o libmaus2/bambam/la-GeneFlatFile.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-SamInfoBase.lo `test -f 'libmaus2/bambam/SamInfoBase.cpp' || echo './'`libmaus2/bambam/SamInfoBase.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/SamInfoBase.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-SamInfoBase.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamHeaderParserStateBase.cpp -o libmaus2/bambam/la-BamHeaderParserStateBase.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/SamInfoBase.cpp -o libmaus2/bambam/la-SamInfoBase.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/digest/la-SHA1.lo `test -f 'libmaus2/digest/SHA1.cpp' || echo './'`libmaus2/digest/SHA1.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/SHA1.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-SHA1.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/digest/la-SHA2_224.lo `test -f 'libmaus2/digest/SHA2_224.cpp' || echo './'`libmaus2/digest/SHA2_224.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/SHA2_224.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-SHA2_224.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/SHA1.cpp -o libmaus2/digest/la-SHA1.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/SHA2_224.cpp -o libmaus2/digest/la-SHA2_224.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/digest/la-SHA2_256.lo `test -f 'libmaus2/digest/SHA2_256.cpp' || echo './'`libmaus2/digest/SHA2_256.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/SHA2_256.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-SHA2_256.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/digest/la-SHA2_384.lo `test -f 'libmaus2/digest/SHA2_384.cpp' || echo './'`libmaus2/digest/SHA2_384.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/SHA2_384.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-SHA2_384.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/digest/la-SHA2_512.lo `test -f 'libmaus2/digest/SHA2_512.cpp' || echo './'`libmaus2/digest/SHA2_512.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/SHA2_512.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-SHA2_512.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/SHA2_256.cpp -o libmaus2/digest/la-SHA2_256.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamStreamingMarkDuplicatesSupport.cpp -o libmaus2/bambam/la-BamStreamingMarkDuplicatesSupport.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/SHA2_384.cpp -o libmaus2/digest/la-SHA2_384.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/SHA2_512.cpp -o libmaus2/digest/la-SHA2_512.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/digest/la-CRC32.lo `test -f 'libmaus2/digest/CRC32.cpp' || echo './'`libmaus2/digest/CRC32.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/CRC32.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-CRC32.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/digest/la-CRC32C_Core.lo `test -f 'libmaus2/digest/CRC32C_Core.cpp' || echo './'`libmaus2/digest/CRC32C_Core.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/CRC32C_Core.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-CRC32C_Core.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/CRC32C_Core.cpp -o libmaus2/digest/la-CRC32C_Core.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/digest/la-CRC32C.lo `test -f 'libmaus2/digest/CRC32C.cpp' || echo './'`libmaus2/digest/CRC32C.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/CRC32C.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-CRC32C.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/digest/la-CRC32_Core.lo `test -f 'libmaus2/digest/CRC32_Core.cpp' || echo './'`libmaus2/digest/CRC32_Core.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/CRC32_Core.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-CRC32_Core.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/CRC32_Core.cpp -o libmaus2/digest/la-CRC32_Core.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fastx/la-NameInfoBase.lo `test -f 'libmaus2/fastx/NameInfoBase.cpp' || echo './'`libmaus2/fastx/NameInfoBase.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/NameInfoBase.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-NameInfoBase.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/CRC32.cpp -o libmaus2/digest/la-CRC32.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/NameInfoBase.cpp -o libmaus2/fastx/la-NameInfoBase.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/CRC32C.cpp -o libmaus2/digest/la-CRC32C.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/parallel/la-RefIdInterval.lo `test -f 'libmaus2/bambam/parallel/RefIdInterval.cpp' || echo './'`libmaus2/bambam/parallel/RefIdInterval.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/parallel/RefIdInterval.cpp -fPIC -DPIC -o libmaus2/bambam/parallel/.libs/la-RefIdInterval.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/parallel/RefIdInterval.cpp -o libmaus2/bambam/parallel/la-RefIdInterval.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fastx/la-RefPathToken.lo `test -f 'libmaus2/fastx/RefPathToken.cpp' || echo './'`libmaus2/fastx/RefPathToken.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/RefPathToken.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-RefPathToken.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fastx/la-RefPathTokenVector.lo `test -f 'libmaus2/fastx/RefPathTokenVector.cpp' || echo './'`libmaus2/fastx/RefPathTokenVector.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/RefPathTokenVector.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-RefPathTokenVector.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/la-AlignmentStatistics.lo `test -f 'libmaus2/lcs/AlignmentStatistics.cpp' || echo './'`libmaus2/lcs/AlignmentStatistics.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/AlignmentStatistics.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-AlignmentStatistics.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/RefPathToken.cpp -o libmaus2/fastx/la-RefPathToken.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/RefPathTokenVector.cpp -o libmaus2/fastx/la-RefPathTokenVector.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fastx/la-SingleWordDNABitBuffer.lo `test -f 'libmaus2/fastx/SingleWordDNABitBuffer.cpp' || echo './'`libmaus2/fastx/SingleWordDNABitBuffer.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/SingleWordDNABitBuffer.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-SingleWordDNABitBuffer.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-LongestIncreasingSubsequenceExtendedResult.lo `test -f 'libmaus2/util/LongestIncreasingSubsequenceExtendedResult.cpp' || echo './'`libmaus2/util/LongestIncreasingSubsequenceExtendedResult.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/LongestIncreasingSubsequenceExtendedResult.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-LongestIncreasingSubsequenceExtendedResult.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/AlignmentStatistics.cpp -o libmaus2/lcs/la-AlignmentStatistics.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/SingleWordDNABitBuffer.cpp -o libmaus2/fastx/la-SingleWordDNABitBuffer.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/LongestIncreasingSubsequenceExtendedResult.cpp -o libmaus2/util/la-LongestIncreasingSubsequenceExtendedResult.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/la-AlignerFactory.lo `test -f 'libmaus2/lcs/AlignerFactory.cpp' || echo './'`libmaus2/lcs/AlignerFactory.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/AlignerFactory.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-AlignerFactory.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/la-BandedAlignerFactory.lo `test -f 'libmaus2/lcs/BandedAlignerFactory.cpp' || echo './'`libmaus2/lcs/BandedAlignerFactory.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/BandedAlignerFactory.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-BandedAlignerFactory.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/dazzler/align/la-TraceBlock.lo `test -f 'libmaus2/dazzler/align/TraceBlock.cpp' || echo './'`libmaus2/dazzler/align/TraceBlock.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/TraceBlock.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-TraceBlock.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/dazzler/align/la-ApproximateRun.lo `test -f 'libmaus2/dazzler/align/ApproximateRun.cpp' || echo './'`libmaus2/dazzler/align/ApproximateRun.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/ApproximateRun.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-ApproximateRun.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/TraceBlock.cpp -o libmaus2/dazzler/align/la-TraceBlock.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/ApproximateRun.cpp -o libmaus2/dazzler/align/la-ApproximateRun.o >/dev/null 2>&1
In file included from libmaus2/lcs/AlignerFactory.cpp:27:
./libmaus2/lcs/NP.hpp: In instantiation of ‘int64_t libmaus2::lcs::NP::npTemplate(iter_a, iter_a, iter_b, iter_b) [with iter_a = const unsigned char*; iter_b = const unsigned char*; bool self_check = true; int64_t = long long int]’:
./libmaus2/lcs/NP.hpp:118:43: required from ‘int64_t libmaus2::lcs::NP::np(iter_a, iter_a, iter_b, iter_b, bool) [with iter_a = const unsigned char*; iter_b = const unsigned char*; int64_t = long long int]’
./libmaus2/lcs/NP.hpp:106:23: required from here
./libmaus2/lcs/NP.hpp:912:46: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare]
912 | if ( AlignmentTraceContainer::capacity() <= std::min(an,bn)+ed )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
./libmaus2/lcs/NP.hpp: In instantiation of ‘int64_t libmaus2::lcs::NP::npTemplate(iter_a, iter_a, iter_b, iter_b) [with iter_a = const unsigned char*; iter_b = const unsigned char*; bool self_check = false; int64_t = long long int]’:
./libmaus2/lcs/NP.hpp:120:44: required from ‘int64_t libmaus2::lcs::NP::np(iter_a, iter_a, iter_b, iter_b, bool) [with iter_a = const unsigned char*; iter_b = const unsigned char*; int64_t = long long int]’
./libmaus2/lcs/NP.hpp:106:23: required from here
./libmaus2/lcs/NP.hpp:912:46: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare]
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/suffixsort/la-BwtMergeBlockSortRequest.lo `test -f 'libmaus2/suffixsort/BwtMergeBlockSortRequest.cpp' || echo './'`libmaus2/suffixsort/BwtMergeBlockSortRequest.cpp
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/dazzler/align/la-OverlapMeta.lo `test -f 'libmaus2/dazzler/align/OverlapMeta.cpp' || echo './'`libmaus2/dazzler/align/OverlapMeta.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/BwtMergeBlockSortRequest.cpp -fPIC -DPIC -o libmaus2/suffixsort/.libs/la-BwtMergeBlockSortRequest.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/OverlapMeta.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-OverlapMeta.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/BandedAlignerFactory.cpp -o libmaus2/lcs/la-BandedAlignerFactory.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/OverlapMeta.cpp -o libmaus2/dazzler/align/la-OverlapMeta.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/AlignerFactory.cpp -o libmaus2/lcs/la-AlignerFactory.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/dazzler/align/la-Tandem.lo `test -f 'libmaus2/dazzler/align/Tandem.cpp' || echo './'`libmaus2/dazzler/align/Tandem.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/Tandem.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-Tandem.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/dazzler/align/la-TandemVector.lo `test -f 'libmaus2/dazzler/align/TandemVector.cpp' || echo './'`libmaus2/dazzler/align/TandemVector.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/TandemVector.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-TandemVector.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/BwtMergeBlockSortRequest.cpp -o libmaus2/suffixsort/la-BwtMergeBlockSortRequest.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/Tandem.cpp -o libmaus2/dazzler/align/la-Tandem.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/math/la-GmpInteger.lo `test -f 'libmaus2/math/GmpInteger.cpp' || echo './'`libmaus2/math/GmpInteger.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/math/GmpInteger.cpp -fPIC -DPIC -o libmaus2/math/.libs/la-GmpInteger.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/TandemVector.cpp -o libmaus2/dazzler/align/la-TandemVector.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/math/GmpInteger.cpp -o libmaus2/math/la-GmpInteger.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/math/la-GmpFloat.lo `test -f 'libmaus2/math/GmpFloat.cpp' || echo './'`libmaus2/math/GmpFloat.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/math/GmpFloat.cpp -fPIC -DPIC -o libmaus2/math/.libs/la-GmpFloat.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/dazzler/align/la-TracePoint.lo `test -f 'libmaus2/dazzler/align/TracePoint.cpp' || echo './'`libmaus2/dazzler/align/TracePoint.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/TracePoint.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-TracePoint.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lz/la-XzDecoder.lo `test -f 'libmaus2/lz/XzDecoder.cpp' || echo './'`libmaus2/lz/XzDecoder.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lz/XzDecoder.cpp -fPIC -DPIC -o libmaus2/lz/.libs/la-XzDecoder.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/TracePoint.cpp -o libmaus2/dazzler/align/la-TracePoint.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/math/GmpFloat.cpp -o libmaus2/math/la-GmpFloat.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-ArgParser.lo `test -f 'libmaus2/util/ArgParser.cpp' || echo './'`libmaus2/util/ArgParser.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/ArgParser.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-ArgParser.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lz/XzDecoder.cpp -o libmaus2/lz/la-XzDecoder.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fastx/la-DNAIndexMetaDataSequence.lo `test -f 'libmaus2/fastx/DNAIndexMetaDataSequence.cpp' || echo './'`libmaus2/fastx/DNAIndexMetaDataSequence.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaDataSequence.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-DNAIndexMetaDataSequence.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fastx/la-DNAIndexMetaData.lo `test -f 'libmaus2/fastx/DNAIndexMetaData.cpp' || echo './'`libmaus2/fastx/DNAIndexMetaData.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaData.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-DNAIndexMetaData.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/ArgParser.cpp -o libmaus2/util/la-ArgParser.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaDataSequence.cpp -o libmaus2/fastx/la-DNAIndexMetaDataSequence.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-PileVectorElement.lo `test -f 'libmaus2/bambam/PileVectorElement.cpp' || echo './'`libmaus2/bambam/PileVectorElement.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/PileVectorElement.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-PileVectorElement.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-PileQualityVectorElement.lo `test -f 'libmaus2/bambam/PileQualityVectorElement.cpp' || echo './'`libmaus2/bambam/PileQualityVectorElement.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/PileQualityVectorElement.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-PileQualityVectorElement.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/PileVectorElement.cpp -o libmaus2/bambam/la-PileVectorElement.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaData.cpp -o libmaus2/fastx/la-DNAIndexMetaData.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/digest/la-SHA3_256.lo `test -f 'libmaus2/digest/SHA3_256.cpp' || echo './'`libmaus2/digest/SHA3_256.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/SHA3_256.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-SHA3_256.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/PileQualityVectorElement.cpp -o libmaus2/bambam/la-PileQualityVectorElement.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fastx/la-DNAIndexMetaDataBigBand.lo `test -f 'libmaus2/fastx/DNAIndexMetaDataBigBand.cpp' || echo './'`libmaus2/fastx/DNAIndexMetaDataBigBand.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaDataBigBand.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-DNAIndexMetaDataBigBand.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fastx/la-DNAIndexMetaDataBigBandBiDir.lo `test -f 'libmaus2/fastx/DNAIndexMetaDataBigBandBiDir.cpp' || echo './'`libmaus2/fastx/DNAIndexMetaDataBigBandBiDir.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaDataBigBandBiDir.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-DNAIndexMetaDataBigBandBiDir.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/rank/la-DNARankBiDirRange.lo `test -f 'libmaus2/rank/DNARankBiDirRange.cpp' || echo './'`libmaus2/rank/DNARankBiDirRange.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/rank/DNARankBiDirRange.cpp -fPIC -DPIC -o libmaus2/rank/.libs/la-DNARankBiDirRange.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/rank/DNARankBiDirRange.cpp -o libmaus2/rank/la-DNARankBiDirRange.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/SHA3_256.cpp -o libmaus2/digest/la-SHA3_256.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/la-NNPTraceElement.lo `test -f 'libmaus2/lcs/NNPTraceElement.cpp' || echo './'`libmaus2/lcs/NNPTraceElement.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/NNPTraceElement.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-NNPTraceElement.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaDataBigBand.cpp -o libmaus2/fastx/la-DNAIndexMetaDataBigBand.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaDataBigBandBiDir.cpp -o libmaus2/fastx/la-DNAIndexMetaDataBigBandBiDir.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/NNPTraceElement.cpp -o libmaus2/lcs/la-NNPTraceElement.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/la-NNPTraceContainer.lo `test -f 'libmaus2/lcs/NNPTraceContainer.cpp' || echo './'`libmaus2/lcs/NNPTraceContainer.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/NNPTraceContainer.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-NNPTraceContainer.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/la-NNPAlignResult.lo `test -f 'libmaus2/lcs/NNPAlignResult.cpp' || echo './'`libmaus2/lcs/NNPAlignResult.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/NNPAlignResult.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-NNPAlignResult.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fastx/la-FastAToCompact4BigBand.lo `test -f 'libmaus2/fastx/FastAToCompact4BigBand.cpp' || echo './'`libmaus2/fastx/FastAToCompact4BigBand.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/FastAToCompact4BigBand.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-FastAToCompact4BigBand.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/suffixsort/bwtb3m/la-BwtMergeSortResult.lo `test -f 'libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp' || echo './'`libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp -fPIC -DPIC -o libmaus2/suffixsort/bwtb3m/.libs/la-BwtMergeSortResult.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/NNPAlignResult.cpp -o libmaus2/lcs/la-NNPAlignResult.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/NNPTraceContainer.cpp -o libmaus2/lcs/la-NNPTraceContainer.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lz/la-ZlibInterface.lo `test -f 'libmaus2/lz/ZlibInterface.cpp' || echo './'`libmaus2/lz/ZlibInterface.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lz/ZlibInterface.cpp -fPIC -DPIC -o libmaus2/lz/.libs/la-ZlibInterface.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/suffixsort/bwtb3m/la-BwtSelectSSA.lo `test -f 'libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp' || echo './'`libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp -fPIC -DPIC -o libmaus2/suffixsort/bwtb3m/.libs/la-BwtSelectSSA.o
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/fastx/FastAToCompact4BigBand.hpp:21,
from libmaus2/fastx/FastAToCompact4BigBand.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lz/ZlibInterface.cpp -o libmaus2/lz/la-ZlibInterface.o >/dev/null 2>&1
In file included from /usr/include/c++/10/cassert:44,
from ./libmaus2/suffixsort/divsufsort.hpp:32,
from ./libmaus2/util/Utf8String.hpp:27,
from ./libmaus2/wavelet/Utf8ToImpCompactHuffmanWaveletTree.hpp:26,
from ./libmaus2/wavelet/RlToHwtBase.hpp:30,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:19:
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtSmallAlphabet(const string&, const libmaus2::huffman::HuffmanTree&, uint64_t) [with entity_type = unsigned char; bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1404:105: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwt(const string&, const string&, std::string, uint64_t) [with bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:136:53: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:812:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
812 | assert ( symtonodesp-symtonodes.begin() == symtonodevecoffsets[sym] );
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtSmallAlphabet(const string&, const libmaus2::huffman::HuffmanTree&, uint64_t) [with entity_type = short unsigned int; bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1413:106: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwt(const string&, const string&, std::string, uint64_t) [with bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:136:53: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:812:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtSmallAlphabet(const string&, const libmaus2::huffman::HuffmanTree&, uint64_t) [with entity_type = unsigned int; bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1422:106: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwt(const string&, const string&, std::string, uint64_t) [with bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:136:53: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:812:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtSmallAlphabet(const string&, const libmaus2::huffman::HuffmanTree&, uint64_t) [with entity_type = long long unsigned int; bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1431:106: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwt(const string&, const string&, std::string, uint64_t) [with bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:136:53: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:812:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtSmallAlphabet(const string&, const libmaus2::huffman::HuffmanTree&, uint64_t) [with entity_type = unsigned char; bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1404:105: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwt(const string&, const string&, std::string, uint64_t) [with bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:143:54: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:812:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtSmallAlphabet(const string&, const libmaus2::huffman::HuffmanTree&, uint64_t) [with entity_type = short unsigned int; bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1413:106: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwt(const string&, const string&, std::string, uint64_t) [with bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:143:54: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:812:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtSmallAlphabet(const string&, const libmaus2::huffman::HuffmanTree&, uint64_t) [with entity_type = unsigned int; bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1422:106: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwt(const string&, const string&, std::string, uint64_t) [with bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:143:54: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:812:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtSmallAlphabet(const string&, const libmaus2::huffman::HuffmanTree&, uint64_t) [with entity_type = long long unsigned int; bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1431:106: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwt(const string&, const string&, std::string, uint64_t) [with bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:143:54: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:812:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static int libmaus2::fastx::FastAToCompact4BigBand::fastaToCompact4BigBand(const std::vector<std::__cxx11::basic_string<char> >&, bool, bool, std::ostream*, std::string)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
libmaus2/fastx/FastAToCompact4BigBand.cpp:403:1: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
403 | }
| ^
libmaus2/fastx/FastAToCompact4BigBand.cpp:403:1: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/FastAToCompact4BigBand.cpp -o libmaus2/fastx/la-FastAToCompact4BigBand.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/aio/la-FileRemoval.lo `test -f 'libmaus2/aio/FileRemoval.cpp' || echo './'`libmaus2/aio/FileRemoval.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/FileRemoval.cpp -fPIC -DPIC -o libmaus2/aio/.libs/la-FileRemoval.o
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtSelectSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp:18:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<QueueElement*, std::vector<QueueElement, std::allocator<QueueElement> > >; _Distance = int; _Tp = QueueElement; _Compare = __gnu_cxx::__ops::_Iter_comp_val<std::less<QueueElement> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<QueueElement*, std::vector<QueueElement, std::allocator<QueueElement> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, IsaTriple>*, std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, IsaTriple>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::sorting::MergingReadBack<IsaTriple, std::less<IsaTriple> >::HeapOrderAdapter>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, IsaTriple>*, std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > > >’ changed in GCC 7.1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/rank/la-DNARankMEM.lo `test -f 'libmaus2/rank/DNARankMEM.cpp' || echo './'`libmaus2/rank/DNARankMEM.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/rank/DNARankMEM.cpp -fPIC -DPIC -o libmaus2/rank/.libs/la-DNARankMEM.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/rank/DNARankMEM.cpp -o libmaus2/rank/la-DNARankMEM.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/la-ChainAddQueueElement.lo `test -f 'libmaus2/lcs/ChainAddQueueElement.cpp' || echo './'`libmaus2/lcs/ChainAddQueueElement.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/ChainAddQueueElement.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-ChainAddQueueElement.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/ChainAddQueueElement.cpp -o libmaus2/lcs/la-ChainAddQueueElement.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/la-Chain.lo `test -f 'libmaus2/lcs/Chain.cpp' || echo './'`libmaus2/lcs/Chain.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/Chain.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-Chain.o
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeLeaf::symbolVector(std::vector<long long int>&) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/FileRemoval.cpp -o libmaus2/aio/la-FileRemoval.o >/dev/null 2>&1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtSelectSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::huffman::IndexEntry&}; _Tp = libmaus2::huffman::IndexEntry; _Alloc = std::allocator<libmaus2::huffman::IndexEntry>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::huffman::IndexEntry>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long int, long long unsigned int>}; _Tp = std::pair<long long int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘virtual void libmaus2::huffman::HuffmanTreeLeaf::symbolDepthVector(std::vector<std::pair<long long int, long long unsigned int> >&, uint64_t) const’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long int, long long unsigned int>*, std::vector<std::pair<long long int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {QueueElement}; _Tp = QueueElement; _Alloc = std::allocator<QueueElement>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<QueueElement, std::allocator<QueueElement> >::iterator’ changed in GCC 7.1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/Chain.cpp -o libmaus2/lcs/la-Chain.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/la-ChainNode.lo `test -f 'libmaus2/lcs/ChainNode.cpp' || echo './'`libmaus2/lcs/ChainNode.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/ChainNode.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-ChainNode.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/ChainNode.cpp -o libmaus2/lcs/la-ChainNode.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/la-ChainNodeInfo.lo `test -f 'libmaus2/lcs/ChainNodeInfo.cpp' || echo './'`libmaus2/lcs/ChainNodeInfo.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/ChainNodeInfo.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-ChainNodeInfo.o
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtSelectSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp:18:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::huffman::RLEncoderTemplate<_huffmanencoderfile_type>::concatenate(const std::vector<std::__cxx11::basic_string<char> >&, const string&, bool) [with _huffmanencoderfile_type = libmaus2::huffman::HuffmanEncoderFileTemplate<libmaus2::aio::SynchronousGenericOutput<unsigned char>, libmaus2::bitio::FastWriteBitWriterTemplate<unsigned char, libmaus2::aio::PutOutputIterator<unsigned char, libmaus2::aio::SynchronousGenericOutput<unsigned char> >, 128, 255, false> >]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtSelectSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp:18:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, IsaTriple>*, std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, IsaTriple>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::sorting::MergingReadBack<IsaTriple, std::less<IsaTriple> >::HeapOrderAdapter>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, IsaTriple>*, std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtSelectSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, IsaTriple>}; _Tp = std::pair<long long unsigned int, IsaTriple>; _Alloc = std::allocator<std::pair<long long unsigned int, IsaTriple> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>}; _Tp = libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>; _Alloc = std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In function ‘static void libmaus2::sorting::InPlaceParallelSort::mergestepRecLevel(iterator, uint64_t, uint64_t, order_type, base_sort&, int, int, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<iterator, order_type, base_sort> >&, uint64_t) [with iterator = std::pair<long long unsigned int, long long unsigned int>*; order_type = libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>; base_sort = libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/ChainNodeInfo.cpp -o libmaus2/lcs/la-ChainNodeInfo.o >/dev/null 2>&1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>}; _Tp = libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>; _Alloc = std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘static void libmaus2::sorting::InPlaceParallelSort::mergestepRecLevel(iterator, uint64_t, uint64_t, order_type, base_sort&, int, int, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<iterator, order_type, base_sort> >&, uint64_t) [with iterator = std::pair<long long unsigned int, long long unsigned int>*; order_type = libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>; base_sort = libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>&}; _Tp = libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>; _Alloc = std::allocator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::sorting::MergingReadBack<_data_type, _order_type>::MergingReadBack(const string&, const std::vector<long long unsigned int>&, uint64_t, uint64_t) [with _data_type = IsaTriple; _order_type = std::less<IsaTriple>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, IsaTriple>*, std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/la-ChainRemoveQueueElement.lo `test -f 'libmaus2/lcs/ChainRemoveQueueElement.cpp' || echo './'`libmaus2/lcs/ChainRemoveQueueElement.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/ChainRemoveQueueElement.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-ChainRemoveQueueElement.o
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtSelectSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp:18:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static uint64_t libmaus2::sorting::PairFileSorting::reduce(const string&, uint64_t, uint64_t, out_type&, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/ChainRemoveQueueElement.cpp -o libmaus2/lcs/la-ChainRemoveQueueElement.o >/dev/null 2>&1
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static uint64_t libmaus2::sorting::PairFileSorting::reduce(const string&, uint64_t, uint64_t, out_type&, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/la-ChainSplayTreeNode.lo `test -f 'libmaus2/lcs/ChainSplayTreeNode.cpp' || echo './'`libmaus2/lcs/ChainSplayTreeNode.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/ChainSplayTreeNode.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-ChainSplayTreeNode.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/ChainSplayTreeNode.cpp -o libmaus2/lcs/la-ChainSplayTreeNode.o >/dev/null 2>&1
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const libmaus2::huffman::HuffmanTreeInnerNode* const&>, std::tuple<>}; _Key = const libmaus2::huffman::HuffmanTreeInnerNode*; _Val = std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >; _Compare = std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>; _Alloc = std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeInnerNode::toDot(std::ostream&) const’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/aio/la-PosixFdOutputStreamFactory.lo `test -f 'libmaus2/aio/PosixFdOutputStreamFactory.cpp' || echo './'`libmaus2/aio/PosixFdOutputStreamFactory.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/PosixFdOutputStreamFactory.cpp -fPIC -DPIC -o libmaus2/aio/.libs/la-PosixFdOutputStreamFactory.o
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static void libmaus2::wavelet::Utf8ToImpCompactHuffmanWaveletTree::constructWaveletTreeFromRl(const string&, const string&, const string&, const libmaus2::huffman::HuffmanTree&, uint64_t, uint64_t) [with rl_decoder = libmaus2::huffman::RLDecoder; bool radixsort = true]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::MemTempFileContainer::getOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::MemTempFileContainer::openOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual void libmaus2::util::MemTempFileContainer::closeOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::istream& libmaus2::util::MemTempFileContainer::openInputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::FileTempFileContainer::getOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::FileTempFileContainer::openOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::istream& libmaus2::util::FileTempFileContainer::openInputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/dazzler/align/la-OverlapHeader.lo `test -f 'libmaus2/dazzler/align/OverlapHeader.cpp' || echo './'`libmaus2/dazzler/align/OverlapHeader.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/OverlapHeader.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-OverlapHeader.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/PosixFdOutputStreamFactory.cpp -o libmaus2/aio/la-PosixFdOutputStreamFactory.o >/dev/null 2>&1
In file included from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtSelectSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp:18:
./libmaus2/autoarray/AutoArray.hpp: In static member function ‘static std::vector<long long unsigned int> libmaus2::sorting::MergingReadBack<_data_type, _order_type>::mergeStep(const string&, const std::vector<long long unsigned int>&, uint64_t, uint64_t) [with _data_type = IsaTriple; _order_type = std::less<IsaTriple>]’:
./libmaus2/autoarray/AutoArray.hpp:1132:5: warning: ‘<anonymous>’ may be used uninitialized in this function [-Wmaybe-uninitialized]
1132 | array[i] = N();
| ^~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtSelectSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp:18:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, IsaTriple>*, std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtSelectSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp:18:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = true; bool keepsecond = true]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int>}; _Tp = std::pair<std::__cxx11::basic_string<char>, long long unsigned int>; _Alloc = std::allocator<std::pair<std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<std::__cxx11::basic_string<char>, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘_ZN8libmaus27wavelet49ImpExternalWaveletGeneratorCompactHuffmanParallel17createFinalStreamISoEEyRT_y._omp_fn.0’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long unsigned int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = true; bool keepsecond = false]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/OverlapHeader.cpp -o libmaus2/dazzler/align/la-OverlapHeader.o >/dev/null 2>&1
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = false; bool keepsecond = true]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = false; bool keepsecond = false]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = true; bool keepsecond = true]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = true; bool keepsecond = false]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-BamAlignment.lo `test -f 'libmaus2/bambam/BamAlignment.cpp' || echo './'`libmaus2/bambam/BamAlignment.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamAlignment.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamAlignment.o
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = false; bool keepsecond = true]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = false; bool keepsecond = false]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtSelectSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static void libmaus2::sorting::PairFileSorting::sortPairFileTemplate(const std::vector<std::__cxx11::basic_string<char> >&, const string&, bool, bool, bool, out_type&, uint64_t, uint64_t, bool, uint64_t, std::ostream*) [with out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static void libmaus2::suffixsort::bwtb3m::BwtSelectSSA::computeSSA(std::vector<std::__cxx11::basic_string<char> >, const string&, const string&, const string&, const std::vector<std::__cxx11::basic_string<char> >&, std::string, bool, uint64_t, uint64_t, uint64_t, uint64_t, std::ostream*)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<QueueElement*, std::vector<QueueElement, std::allocator<QueueElement> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<QueueElement*, std::vector<QueueElement, std::allocator<QueueElement> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/suffixsort/bwtb3m/la-MergeStrategyMergeInput.lo `test -f 'libmaus2/suffixsort/bwtb3m/MergeStrategyMergeInput.cpp' || echo './'`libmaus2/suffixsort/bwtb3m/MergeStrategyMergeInput.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/MergeStrategyMergeInput.cpp -fPIC -DPIC -o libmaus2/suffixsort/bwtb3m/.libs/la-MergeStrategyMergeInput.o
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::wavelet::ImpExternalWaveletGeneratorHuffman::ImpExternalWaveletGeneratorHuffman(const libmaus2::huffman::HuffmanTreeNode*, libmaus2::util::TempFileContainer&)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::wavelet::ImpHuffmanWaveletTree::init()’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘libmaus2::util::ImpCompactNumberArray::unique_ptr_type libmaus2::util::ImpCompactNumberArrayGenerator::createFinal()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘_ZN8libmaus210suffixsort6bwtb3m12BwtSelectSSA10computeSSAESt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS9_EERKS9_SD_SD_RKSB_S9_byyyyPSo._omp_fn.0’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, IsaTriple>*, std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp -o libmaus2/suffixsort/bwtb3m/la-BwtSelectSSA.o >/dev/null 2>&1
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwt(const string&, const string&, std::string, uint64_t) [with bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/BamAlignment.cpp -o libmaus2/bambam/la-BamAlignment.o >/dev/null 2>&1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/util/NumberSerialisation.hpp:28,
from ./libmaus2/suffixsort/bwtb3m/MergeStrategyMergeGapRequestQueryObject.hpp:24,
from ./libmaus2/suffixsort/bwtb3m/MergeStrategyBlock.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/MergeStrategyMergeInput.hpp:21,
from libmaus2/suffixsort/bwtb3m/MergeStrategyMergeInput.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::suffixsort::BwtMergeZBlock}; _Tp = libmaus2::suffixsort::BwtMergeZBlock; _Alloc = std::allocator<libmaus2::suffixsort::BwtMergeZBlock>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::suffixsort::BwtMergeZBlock>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘virtual void libmaus2::suffixsort::bwtb3m::MergeStrategyMergeBlock::fillGapRequestObjects(uint64_t)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::suffixsort::BwtMergeZBlock*, std::vector<libmaus2::suffixsort::BwtMergeZBlock> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/MergeStrategyMergeInput.cpp -o libmaus2/suffixsort/bwtb3m/la-MergeStrategyMergeInput.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp -o libmaus2/suffixsort/bwtb3m/la-BwtMergeSortResult.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/aio/la-InputOutputStreamInstance.lo `test -f 'libmaus2/aio/InputOutputStreamInstance.cpp' || echo './'`libmaus2/aio/InputOutputStreamInstance.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/InputOutputStreamInstance.cpp -fPIC -DPIC -o libmaus2/aio/.libs/la-InputOutputStreamInstance.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/InputOutputStreamInstance.cpp -o libmaus2/aio/la-InputOutputStreamInstance.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/dazzler/align/la-OverlapInfo.lo `test -f 'libmaus2/dazzler/align/OverlapInfo.cpp' || echo './'`libmaus2/dazzler/align/OverlapInfo.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/OverlapInfo.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-OverlapInfo.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/OverlapInfo.cpp -o libmaus2/dazzler/align/la-OverlapInfo.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/dazzler/align/la-OverlapDataInterface.lo `test -f 'libmaus2/dazzler/align/OverlapDataInterface.cpp' || echo './'`libmaus2/dazzler/align/OverlapDataInterface.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/OverlapDataInterface.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-OverlapDataInterface.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-PathTools.lo `test -f 'libmaus2/util/PathTools.cpp' || echo './'`libmaus2/util/PathTools.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/PathTools.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-PathTools.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/OverlapDataInterface.cpp -o libmaus2/dazzler/align/la-OverlapDataInterface.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/PathTools.cpp -o libmaus2/util/la-PathTools.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/OFStreamOutputStreamFactory.cpp -fPIC -DPIC -o libmaus2/aio/.libs/la-OFStreamOutputStreamFactory.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/PosixFdInput.cpp -fPIC -DPIC -o libmaus2/aio/.libs/la-PosixFdInput.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/OFStreamOutputStreamFactory.cpp -o libmaus2/aio/la-OFStreamOutputStreamFactory.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/PosixFdInput.cpp -o libmaus2/aio/la-PosixFdInput.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lz/BgzfDeflateHeaderFunctions.cpp -fPIC -DPIC -o libmaus2/lz/.libs/la-BgzfDeflateHeaderFunctions.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lz/BgzfDeflateHeaderFunctions.cpp -o libmaus2/lz/la-BgzfDeflateHeaderFunctions.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lz/BgzfDeflateZStreamBase.cpp -fPIC -DPIC -o libmaus2/lz/.libs/la-BgzfDeflateZStreamBase.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/ChecksumsFactory.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-ChecksumsFactory.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lz/BgzfDeflateZStreamBase.cpp -o libmaus2/lz/la-BgzfDeflateZStreamBase.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/SecrecyInputStreamFactory.cpp -fPIC -DPIC -o libmaus2/aio/.libs/la-SecrecyInputStreamFactory.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/SecrecyOutputStreamFactory.cpp -fPIC -DPIC -o libmaus2/aio/.libs/la-SecrecyOutputStreamFactory.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/SecrecyInputStreamFactory.cpp -o libmaus2/aio/la-SecrecyInputStreamFactory.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentConstants128.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_128_la-SimdX86GlobalAlignmentConstants128.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentConstants128.cpp -o libmaus2/lcs/simd_align_128_la-SimdX86GlobalAlignmentConstants128.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/SimdX86BandedGlobalAlignmentX128_8.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_128_la-SimdX86BandedGlobalAlignmentX128_8.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/SimdX86BandedGlobalAlignmentX128_8.cpp -o libmaus2/lcs/simd_align_128_la-SimdX86BandedGlobalAlignmentX128_8.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/SimdX86BandedGlobalAlignmentX128_16.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_128_la-SimdX86BandedGlobalAlignmentX128_16.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/SimdX86BandedGlobalAlignmentX128_16.cpp -o libmaus2/lcs/simd_align_128_la-SimdX86BandedGlobalAlignmentX128_16.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/simd_align_128_la-SimdX86GlobalAlignmentX128_8.lo `test -f 'libmaus2/lcs/SimdX86GlobalAlignmentX128_8.cpp' || echo './'`libmaus2/lcs/SimdX86GlobalAlignmentX128_8.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentX128_8.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_128_la-SimdX86GlobalAlignmentX128_8.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentX128_8.cpp -o libmaus2/lcs/simd_align_128_la-SimdX86GlobalAlignmentX128_8.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/simd_align_128_la-SimdX86GlobalAlignmentX128_16.lo `test -f 'libmaus2/lcs/SimdX86GlobalAlignmentX128_16.cpp' || echo './'`libmaus2/lcs/SimdX86GlobalAlignmentX128_16.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentX128_16.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_128_la-SimdX86GlobalAlignmentX128_16.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentX128_16.cpp -o libmaus2/lcs/simd_align_128_la-SimdX86GlobalAlignmentX128_16.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/simd_align_256_la-SimdX86GlobalAlignmentConstants256.lo `test -f 'libmaus2/lcs/SimdX86GlobalAlignmentConstants256.cpp' || echo './'`libmaus2/lcs/SimdX86GlobalAlignmentConstants256.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentConstants256.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_256_la-SimdX86GlobalAlignmentConstants256.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentConstants256.cpp -o libmaus2/lcs/simd_align_256_la-SimdX86GlobalAlignmentConstants256.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/simd_align_256_la-SimdX86BandedGlobalAlignmentY256_8.lo `test -f 'libmaus2/lcs/SimdX86BandedGlobalAlignmentY256_8.cpp' || echo './'`libmaus2/lcs/SimdX86BandedGlobalAlignmentY256_8.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/SimdX86BandedGlobalAlignmentY256_8.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_256_la-SimdX86BandedGlobalAlignmentY256_8.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/SimdX86BandedGlobalAlignmentY256_8.cpp -o libmaus2/lcs/simd_align_256_la-SimdX86BandedGlobalAlignmentY256_8.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/simd_align_256_la-SimdX86BandedGlobalAlignmentY256_16.lo `test -f 'libmaus2/lcs/SimdX86BandedGlobalAlignmentY256_16.cpp' || echo './'`libmaus2/lcs/SimdX86BandedGlobalAlignmentY256_16.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/SimdX86BandedGlobalAlignmentY256_16.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_256_la-SimdX86BandedGlobalAlignmentY256_16.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/SimdX86BandedGlobalAlignmentY256_16.cpp -o libmaus2/lcs/simd_align_256_la-SimdX86BandedGlobalAlignmentY256_16.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/simd_align_256_la-SimdX86BandedGlobalAlignmentScoreY256_16.lo `test -f 'libmaus2/lcs/SimdX86BandedGlobalAlignmentScoreY256_16.cpp' || echo './'`libmaus2/lcs/SimdX86BandedGlobalAlignmentScoreY256_16.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/SimdX86BandedGlobalAlignmentScoreY256_16.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_256_la-SimdX86BandedGlobalAlignmentScoreY256_16.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/SimdX86BandedGlobalAlignmentScoreY256_16.cpp -o libmaus2/lcs/simd_align_256_la-SimdX86BandedGlobalAlignmentScoreY256_16.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/simd_align_256_la-SimdX86GlobalAlignmentY256_8.lo `test -f 'libmaus2/lcs/SimdX86GlobalAlignmentY256_8.cpp' || echo './'`libmaus2/lcs/SimdX86GlobalAlignmentY256_8.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentY256_8.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_256_la-SimdX86GlobalAlignmentY256_8.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentY256_8.cpp -o libmaus2/lcs/simd_align_256_la-SimdX86GlobalAlignmentY256_8.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/simd_align_256_la-SimdX86GlobalAlignmentY256_16.lo `test -f 'libmaus2/lcs/SimdX86GlobalAlignmentY256_16.cpp' || echo './'`libmaus2/lcs/SimdX86GlobalAlignmentY256_16.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentY256_16.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_256_la-SimdX86GlobalAlignmentY256_16.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentY256_16.cpp -o libmaus2/lcs/simd_align_256_la-SimdX86GlobalAlignmentY256_16.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/simd_align_256_la-AlignmentOneAgainstManyAVX2.lo `test -f 'libmaus2/lcs/AlignmentOneAgainstManyAVX2.cpp' || echo './'`libmaus2/lcs/AlignmentOneAgainstManyAVX2.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/AlignmentOneAgainstManyAVX2.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_256_la-AlignmentOneAgainstManyAVX2.o
libmaus2/lcs/AlignmentOneAgainstManyAVX2.cpp: In member function ‘virtual void libmaus2::lcs::AlignmentOneAgainstManyAVX2::process(const uint8_t*, const uint8_t*, const std::pair<const unsigned char*, long long unsigned int>*, uint64_t, libmaus2::autoarray::AutoArray<long long unsigned int>&)’:
libmaus2/lcs/AlignmentOneAgainstManyAVX2.cpp:353:18: warning: unused parameter ‘qa’ [-Wunused-parameter]
353 | uint8_t const * qa,
| ~~~~~~~~~~~~~~~~^~
libmaus2/lcs/AlignmentOneAgainstManyAVX2.cpp:354:18: warning: unused parameter ‘qe’ [-Wunused-parameter]
354 | uint8_t const * qe,
| ~~~~~~~~~~~~~~~~^~
libmaus2/lcs/AlignmentOneAgainstManyAVX2.cpp:355:46: warning: unused parameter ‘MA’ [-Wunused-parameter]
355 | std::pair<uint8_t const *,uint64_t> const * MA,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
In file included from ./libmaus2/lcs/AlignmentOneAgainstManyAVX2.hpp:24,
from libmaus2/lcs/AlignmentOneAgainstManyAVX2.cpp:19:
./libmaus2/lcs/NP.hpp: In instantiation of ‘int64_t libmaus2::lcs::NP::npTemplate(iter_a, iter_a, iter_b, iter_b) [with iter_a = const unsigned char*; iter_b = const unsigned char*; bool self_check = true; int64_t = long long int]’:
./libmaus2/lcs/NP.hpp:118:43: required from ‘int64_t libmaus2::lcs::NP::np(iter_a, iter_a, iter_b, iter_b, bool) [with iter_a = const unsigned char*; iter_b = const unsigned char*; int64_t = long long int]’
./libmaus2/lcs/NP.hpp:106:23: required from here
./libmaus2/lcs/NP.hpp:912:46: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare]
912 | if ( AlignmentTraceContainer::capacity() <= std::min(an,bn)+ed )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
./libmaus2/lcs/NP.hpp: In instantiation of ‘int64_t libmaus2::lcs::NP::npTemplate(iter_a, iter_a, iter_b, iter_b) [with iter_a = const unsigned char*; iter_b = const unsigned char*; bool self_check = false; int64_t = long long int]’:
./libmaus2/lcs/NP.hpp:120:44: required from ‘int64_t libmaus2::lcs::NP::np(iter_a, iter_a, iter_b, iter_b, bool) [with iter_a = const unsigned char*; iter_b = const unsigned char*; int64_t = long long int]’
./libmaus2/lcs/NP.hpp:106:23: required from here
./libmaus2/lcs/NP.hpp:912:46: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare]
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/SecrecyOutputStreamFactory.cpp -o libmaus2/aio/la-SecrecyOutputStreamFactory.o >/dev/null 2>&1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testThreadPoolRead-testThreadPoolRead.o `test -f 'test/testThreadPoolRead.cpp' || echo './'`test/testThreadPoolRead.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/AlignmentOneAgainstManyAVX2.cpp -o libmaus2/lcs/simd_align_256_la-AlignmentOneAgainstManyAVX2.o >/dev/null 2>&1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o `test -f 'test/testThreadPoolBgzfRead.cpp' || echo './'`test/testThreadPoolBgzfRead.cpp
In file included from test/testThreadPoolBgzfRead.cpp:18:
./libmaus2/parallel/threadpool/bgzf/BGZFInputThread.hpp: In static member function ‘static int32_t libmaus2::parallel::threadpool::bgzf::BgzfHeaderDecoderBase::geti32(const char*, std::size_t)’:
./libmaus2/parallel/threadpool/bgzf/BGZFInputThread.hpp:553:16: warning: integer overflow in expression of type ‘long int’ results in ‘-2147483648’ [-Woverflow]
553 | return (-(1l << 31)) + static_cast<int32_t>(u & 0x7FFFFFFFl);
| ^~~~~~~~~~~
./libmaus2/parallel/threadpool/bgzf/BGZFInputThread.hpp: In member function ‘virtual void libmaus2::parallel::threadpool::bgzf::BgzfInputReadInterface::inputThreadCallbackInterfaceBlockRead(libmaus2::parallel::threadpool::input::ThreadPoolInputInfo*)’:
./libmaus2/parallel/threadpool/bgzf/BGZFInputThread.hpp:741:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
741 | while ( ce-cc >= BgzfHeaderDecoder::getCheckLength() )
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o `test -f 'test/testThreadPoolBgzfDecompress.cpp' || echo './'`test/testThreadPoolBgzfDecompress.cpp
In file included from ./libmaus2/parallel/threadpool/bgzf/DecompressThread.hpp:21,
from test/testThreadPoolBgzfDecompress.cpp:18:
./libmaus2/parallel/threadpool/bgzf/BGZFInputThread.hpp: In static member function ‘static int32_t libmaus2::parallel::threadpool::bgzf::BgzfHeaderDecoderBase::geti32(const char*, std::size_t)’:
./libmaus2/parallel/threadpool/bgzf/BGZFInputThread.hpp:553:16: warning: integer overflow in expression of type ‘long int’ results in ‘-2147483648’ [-Woverflow]
553 | return (-(1l << 31)) + static_cast<int32_t>(u & 0x7FFFFFFFl);
| ^~~~~~~~~~~
./libmaus2/parallel/threadpool/bgzf/BGZFInputThread.hpp: In member function ‘virtual void libmaus2::parallel::threadpool::bgzf::BgzfInputReadInterface::inputThreadCallbackInterfaceBlockRead(libmaus2::parallel::threadpool::input::ThreadPoolInputInfo*)’:
./libmaus2/parallel/threadpool/bgzf/BGZFInputThread.hpp:741:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
741 | while ( ce-cc >= BgzfHeaderDecoder::getCheckLength() )
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from test/testThreadPoolBgzfDecompress.cpp:18:
./libmaus2/parallel/threadpool/bgzf/DecompressThread.hpp: In member function ‘virtual void libmaus2::parallel::threadpool::bgzf::BgzfBlockInfoEnqueDecompressHandler::handleBgzfBlockInfo(libmaus2::parallel::threadpool::bgzf::BgzfBlockInfo::shared_ptr_type)’:
./libmaus2/parallel/threadpool/bgzf/DecompressThread.hpp:668:22: warning: unused variable ‘absid’ [-Wunused-variable]
668 | uint64_t const absid = ptr->absid.load();
| ^~~~~
test/testThreadPoolBgzfDecompress.cpp: In member function ‘virtual void libmaus2::parallel::threadpool::bgzf::BgzfDataDecompressedTrivialReturnInterface::dataDecompressed(libmaus2::parallel::threadpool::input::ThreadPoolInputInfo*, libmaus2::parallel::threadpool::bgzf::BgzfBlockInfo::shared_ptr_type, uint64_t, uint64_t, uint64_t, std::shared_ptr<char []>, uint64_t, libmaus2::parallel::threadpool::bgzf::BgzfBlockInfoEnqueDecompressHandler*, libmaus2::parallel::threadpool::bgzf::BgzfBlockInfoProcessor*)’:
test/testThreadPoolBgzfDecompress.cpp:56:19: warning: unused variable ‘blockcomplete’ [-Wunused-variable]
56 | bool const blockcomplete = decwa.incrementDone(block.blockid);
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/parallel/threadpool/input/ThreadPoolInput.hpp:22,
from ./libmaus2/parallel/threadpool/bgzf/BGZFInputThread.hpp:21,
from test/testThreadPoolBgzfRead.cpp:18:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/parallel/threadpool/input/ThreadPoolInput.hpp:22,
from ./libmaus2/parallel/threadpool/bgzf/BGZFInputThread.hpp:21,
from test/testThreadPoolBgzfRead.cpp:18:
/usr/include/c++/10/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long unsigned int; _Tp = std::shared_ptr<std::atomic<long long unsigned int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > > >]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testThreadPoolBamParse-testThreadPoolBamParse.o `test -f 'test/testThreadPoolBamParse.cpp' || echo './'`test/testThreadPoolBamParse.cpp
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::parallel::threadpool::bgzf::BgzfInputThreadControl::BgzfInputThreadControl(libmaus2::parallel::threadpool::ThreadPool&, std::vector<std::__cxx11::basic_string<char> >, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from ./libmaus2/parallel/threadpool/bgzf/DecompressThread.hpp:21,
from test/testThreadPoolBamParse.cpp:18:
./libmaus2/parallel/threadpool/bgzf/BGZFInputThread.hpp: In static member function ‘static int32_t libmaus2::parallel::threadpool::bgzf::BgzfHeaderDecoderBase::geti32(const char*, std::size_t)’:
./libmaus2/parallel/threadpool/bgzf/BGZFInputThread.hpp:553:16: warning: integer overflow in expression of type ‘long int’ results in ‘-2147483648’ [-Woverflow]
553 | return (-(1l << 31)) + static_cast<int32_t>(u & 0x7FFFFFFFl);
| ^~~~~~~~~~~
./libmaus2/parallel/threadpool/bgzf/BGZFInputThread.hpp: In member function ‘virtual void libmaus2::parallel::threadpool::bgzf::BgzfInputReadInterface::inputThreadCallbackInterfaceBlockRead(libmaus2::parallel::threadpool::input::ThreadPoolInputInfo*)’:
./libmaus2/parallel/threadpool/bgzf/BGZFInputThread.hpp:741:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
741 | while ( ce-cc >= BgzfHeaderDecoder::getCheckLength() )
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/parallel/threadpool/input/ThreadPoolInput.hpp:22,
from ./libmaus2/parallel/threadpool/bgzf/BGZFInputThread.hpp:21,
from ./libmaus2/parallel/threadpool/bgzf/DecompressThread.hpp:21,
from test/testThreadPoolBgzfDecompress.cpp:18:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock*, std::vector<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock, std::allocator<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock> > >; _Distance = int; _Tp = libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlockComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock*, std::vector<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock, std::allocator<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
In file included from test/testThreadPoolBamParse.cpp:18:
./libmaus2/parallel/threadpool/bgzf/DecompressThread.hpp: In member function ‘virtual void libmaus2::parallel::threadpool::bgzf::BgzfBlockInfoEnqueDecompressHandler::handleBgzfBlockInfo(libmaus2::parallel::threadpool::bgzf::BgzfBlockInfo::shared_ptr_type)’:
./libmaus2/parallel/threadpool/bgzf/DecompressThread.hpp:668:22: warning: unused variable ‘absid’ [-Wunused-variable]
668 | uint64_t const absid = ptr->absid.load();
| ^~~~~
test/testThreadPoolBamParse.cpp: In member function ‘void libmaus2::parallel::threadpool::bam::BamParsePackageData::dispatch()’:
test/testThreadPoolBamParse.cpp:80:19: warning: unused variable ‘blockcomplete’ [-Wunused-variable]
80 | bool const blockcomplete = decwa.incrementDone(block.blockid);
| ^~~~~~~~~~~~~
test/testThreadPoolBamParse.cpp: In member function ‘virtual void libmaus2::parallel::threadpool::bam::BgzfDataDecompressedBamParseInterface::dataDecompressed(libmaus2::parallel::threadpool::input::ThreadPoolInputInfo*, libmaus2::parallel::threadpool::bgzf::BgzfBlockInfo::shared_ptr_type, uint64_t, uint64_t, uint64_t, std::shared_ptr<char []>, uint64_t, libmaus2::parallel::threadpool::bgzf::BgzfBlockInfoEnqueDecompressHandler*, libmaus2::parallel::threadpool::bgzf::BgzfBlockInfoProcessor*)’:
test/testThreadPoolBamParse.cpp:151:22: warning: unused variable ‘streamid’ [-Wunused-variable]
151 | uint64_t const streamid = inputinfo->streamid;
| ^~~~~~~~
test/testThreadPoolBamParse.cpp:153:35: warning: unused variable ‘PC’ [-Wunused-variable]
153 | ThreadPoolBamParseControl * PC = dynamic_cast<ThreadPoolBamParseControl *>(processor);
| ^~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testAIO-testAIO.o `test -f 'test/testAIO.cpp' || echo './'`test/testAIO.cpp
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/parallel/threadpool/input/ThreadPoolInput.hpp:22,
from ./libmaus2/parallel/threadpool/bgzf/BGZFInputThread.hpp:21,
from ./libmaus2/parallel/threadpool/bgzf/DecompressThread.hpp:21,
from test/testThreadPoolBgzfDecompress.cpp:18:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/parallel/threadpool/input/ThreadPoolInput.hpp:22,
from ./libmaus2/parallel/threadpool/bgzf/BGZFInputThread.hpp:21,
from ./libmaus2/parallel/threadpool/bgzf/DecompressThread.hpp:21,
from test/testThreadPoolBgzfDecompress.cpp:18:
/usr/include/c++/10/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long unsigned int; _Tp = std::shared_ptr<std::atomic<long long unsigned int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > > >]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/parallel/threadpool/input/ThreadPoolInput.hpp:22,
from ./libmaus2/parallel/threadpool/bgzf/BGZFInputThread.hpp:21,
from ./libmaus2/parallel/threadpool/bgzf/DecompressThread.hpp:21,
from test/testThreadPoolBgzfDecompress.cpp:18:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<std::mutex> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::mutex> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::mutex> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::mutex> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::mutex> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::mutex> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/parallel/threadpool/input/ThreadPoolInput.hpp:22,
from ./libmaus2/parallel/threadpool/bgzf/BGZFInputThread.hpp:21,
from ./libmaus2/parallel/threadpool/bgzf/DecompressThread.hpp:21,
from test/testThreadPoolBgzfDecompress.cpp:18:
/usr/include/c++/10/bits/stl_map.h: In member function ‘libmaus2::parallel::threadpool::bgzf::BgzfInputThreadControl::ReadInfo libmaus2::parallel::threadpool::bgzf::BgzfInputThreadControl::getQ(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::mutex> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::mutex> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::mutex> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/parallel/threadpool/input/ThreadPoolInput.hpp:22,
from ./libmaus2/parallel/threadpool/bgzf/BGZFInputThread.hpp:21,
from ./libmaus2/parallel/threadpool/bgzf/DecompressThread.hpp:21,
from test/testThreadPoolBgzfDecompress.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock&}; _Tp = libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock; _Alloc = std::allocator<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock, std::allocator<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/parallel/threadpool/input/ThreadPoolInput.hpp:22,
from ./libmaus2/parallel/threadpool/bgzf/BGZFInputThread.hpp:21,
from ./libmaus2/parallel/threadpool/bgzf/DecompressThread.hpp:21,
from test/testThreadPoolBgzfDecompress.cpp:18:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::parallel::threadpool::bgzf::BgzfInputThreadControl::BgzfInputThreadControl(libmaus2::parallel::threadpool::ThreadPool&, std::vector<std::__cxx11::basic_string<char> >, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/parallel/threadpool/input/ThreadPoolInput.hpp:22,
from ./libmaus2/parallel/threadpool/bgzf/BGZFInputThread.hpp:21,
from ./libmaus2/parallel/threadpool/bgzf/DecompressThread.hpp:21,
from test/testThreadPoolBamParse.cpp:18:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock*, std::vector<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock, std::allocator<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock> > >; _Distance = int; _Tp = libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlockComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock*, std::vector<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock, std::allocator<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘bool libmaus2::parallel::threadpool::bgzf::BgzfBlockInfoEnqueDecompressHandler::getDecompressionBlockPair(uint64_t, libmaus2::parallel::threadpool::bgzf::BgzfBlockInfo::shared_ptr_type&, std::shared_ptr<char []>&)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::mutex> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::mutex> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::mutex> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/parallel/threadpool/input/ThreadPoolInput.hpp:22,
from ./libmaus2/parallel/threadpool/bgzf/BGZFInputThread.hpp:21,
from ./libmaus2/parallel/threadpool/bgzf/DecompressThread.hpp:21,
from test/testThreadPoolBgzfDecompress.cpp:18:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::parallel::threadpool::bgzf::BgzfDataDecompressedTrivialReturnInterface::dataDecompressed(libmaus2::parallel::threadpool::input::ThreadPoolInputInfo*, libmaus2::parallel::threadpool::bgzf::BgzfBlockInfo::shared_ptr_type, uint64_t, uint64_t, uint64_t, std::shared_ptr<char []>, uint64_t, libmaus2::parallel::threadpool::bgzf::BgzfBlockInfoEnqueDecompressHandler*, libmaus2::parallel::threadpool::bgzf::BgzfBlockInfoProcessor*)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock*, std::vector<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock, std::allocator<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock*, std::vector<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock, std::allocator<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/aio/MemoryFile.hpp:23,
from ./libmaus2/aio/MemoryFileAdapter.hpp:23,
from ./libmaus2/aio/MemoryFileContainer.hpp:22,
from ./libmaus2/aio/FileRemoval.hpp:22,
from test/testAIO.cpp:22:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<SerObject*, std::vector<SerObject> >; _Distance = int; _Tp = SerObject; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<SerObject*, std::vector<SerObject> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, SerObject>*, std::vector<std::pair<long long unsigned int, SerObject>, std::allocator<std::pair<long long unsigned int, SerObject> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, SerObject>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::sorting::SerialisingMergingReadBack<SerObject, std::less<SerObject> >::HeapOrderAdapter>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, SerObject>*, std::vector<std::pair<long long unsigned int, SerObject>, std::allocator<std::pair<long long unsigned int, SerObject> > > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/aio/MemoryFile.hpp:23,
from ./libmaus2/aio/MemoryFileAdapter.hpp:23,
from ./libmaus2/aio/MemoryFileContainer.hpp:22,
from ./libmaus2/aio/FileRemoval.hpp:22,
from test/testAIO.cpp:22:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<SerObject*, std::vector<SerObject> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<SerObject*, std::vector<SerObject> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<SerObject*, std::vector<SerObject> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<SerObject*, std::vector<SerObject> >’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testbitbtree-testbitbtree.o `test -f 'test/testbitbtree.cpp' || echo './'`test/testbitbtree.cpp
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/parallel/threadpool/input/ThreadPoolInput.hpp:22,
from ./libmaus2/parallel/threadpool/bgzf/BGZFInputThread.hpp:21,
from ./libmaus2/parallel/threadpool/bgzf/DecompressThread.hpp:21,
from test/testThreadPoolBamParse.cpp:18:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/parallel/threadpool/input/ThreadPoolInput.hpp:22,
from ./libmaus2/parallel/threadpool/bgzf/BGZFInputThread.hpp:21,
from ./libmaus2/parallel/threadpool/bgzf/DecompressThread.hpp:21,
from test/testThreadPoolBamParse.cpp:18:
/usr/include/c++/10/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long unsigned int; _Tp = std::shared_ptr<std::atomic<long long unsigned int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > > >]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/parallel/threadpool/input/ThreadPoolInput.hpp:22,
from ./libmaus2/parallel/threadpool/bgzf/BGZFInputThread.hpp:21,
from ./libmaus2/parallel/threadpool/bgzf/DecompressThread.hpp:21,
from test/testThreadPoolBamParse.cpp:18:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<std::mutex> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::mutex> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::mutex> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::mutex> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::mutex> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::mutex> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/parallel/threadpool/input/ThreadPoolInput.hpp:22,
from ./libmaus2/parallel/threadpool/bgzf/BGZFInputThread.hpp:21,
from ./libmaus2/parallel/threadpool/bgzf/DecompressThread.hpp:21,
from test/testThreadPoolBamParse.cpp:18:
/usr/include/c++/10/bits/stl_map.h: In member function ‘libmaus2::parallel::threadpool::bgzf::BgzfInputThreadControl::ReadInfo libmaus2::parallel::threadpool::bgzf::BgzfInputThreadControl::getQ(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::mutex> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::mutex> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::mutex> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/parallel/threadpool/input/ThreadPoolInput.hpp:22,
from ./libmaus2/parallel/threadpool/bgzf/BGZFInputThread.hpp:21,
from ./libmaus2/parallel/threadpool/bgzf/DecompressThread.hpp:21,
from test/testThreadPoolBamParse.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock&}; _Tp = libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock; _Alloc = std::allocator<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock, std::allocator<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/parallel/threadpool/input/ThreadPoolInput.hpp:22,
from ./libmaus2/parallel/threadpool/bgzf/BGZFInputThread.hpp:21,
from ./libmaus2/parallel/threadpool/bgzf/DecompressThread.hpp:21,
from test/testThreadPoolBamParse.cpp:18:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::parallel::threadpool::bgzf::BgzfInputThreadControl::BgzfInputThreadControl(libmaus2::parallel::threadpool::ThreadPool&, std::vector<std::__cxx11::basic_string<char> >, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::atomic<long long unsigned int> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/MemoryFile.hpp:23,
from ./libmaus2/aio/MemoryFileAdapter.hpp:23,
from ./libmaus2/aio/MemoryFileContainer.hpp:22,
from ./libmaus2/aio/FileRemoval.hpp:22,
from test/testAIO.cpp:22:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const SerObject&}; _Tp = SerObject; _Alloc = std::allocator<SerObject>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<SerObject>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘bool libmaus2::parallel::threadpool::bgzf::BgzfBlockInfoEnqueDecompressHandler::getDecompressionBlockPair(uint64_t, libmaus2::parallel::threadpool::bgzf::BgzfBlockInfo::shared_ptr_type&, std::shared_ptr<char []>&)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::mutex> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::mutex> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::mutex> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/parallel/threadpool/input/ThreadPoolInput.hpp:22,
from ./libmaus2/parallel/threadpool/bgzf/BGZFInputThread.hpp:21,
from ./libmaus2/parallel/threadpool/bgzf/DecompressThread.hpp:21,
from test/testThreadPoolBamParse.cpp:18:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::parallel::threadpool::bam::BamParsePackageData::dispatch()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock*, std::vector<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock, std::allocator<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock*, std::vector<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock, std::allocator<libmaus2::parallel::threadpool::bgzf::BgzfDecompressedBlock> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/bitbtree/bitbtree.hpp:29,
from test/testbitbtree.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bitbtree::BitBTree<1, 1>::VectorConstructionTuple}; _Tp = libmaus2::bitbtree::BitBTree<1, 1>::VectorConstructionTuple; _Alloc = std::allocator<libmaus2::bitbtree::BitBTree<1, 1>::VectorConstructionTuple>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bitbtree::BitBTree<1, 1>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<1, 1>::VectorConstructionTuple> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/ChecksumsFactory.cpp -o libmaus2/bambam/la-ChecksumsFactory.o >/dev/null 2>&1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/aio/MemoryFile.hpp:23,
from ./libmaus2/aio/MemoryFileAdapter.hpp:23,
from ./libmaus2/aio/MemoryFileContainer.hpp:22,
from ./libmaus2/aio/FileRemoval.hpp:22,
from test/testAIO.cpp:22:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<SerObject*, std::vector<SerObject> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<SerObject*, std::vector<SerObject> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<SerObject*, std::vector<SerObject> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<SerObject*, std::vector<SerObject> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/MemoryFile.hpp:23,
from ./libmaus2/aio/MemoryFileAdapter.hpp:23,
from ./libmaus2/aio/MemoryFileContainer.hpp:22,
from ./libmaus2/aio/FileRemoval.hpp:22,
from test/testAIO.cpp:22:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::aio::SerialisingSortingBufferedOutput<SerObject, std::less<SerObject> >::BlockDescriptor}; _Tp = libmaus2::aio::SerialisingSortingBufferedOutput<SerObject, std::less<SerObject> >::BlockDescriptor; _Alloc = std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<SerObject, std::less<SerObject> >::BlockDescriptor>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::aio::SerialisingSortingBufferedOutput<SerObject, std::less<SerObject> >::BlockDescriptor, std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<SerObject, std::less<SerObject> >::BlockDescriptor> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/aio/MemoryFile.hpp:23,
from ./libmaus2/aio/MemoryFileAdapter.hpp:23,
from ./libmaus2/aio/MemoryFileContainer.hpp:22,
from ./libmaus2/aio/FileRemoval.hpp:22,
from test/testAIO.cpp:22:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, SerObject>*, std::vector<std::pair<long long unsigned int, SerObject>, std::allocator<std::pair<long long unsigned int, SerObject> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, SerObject>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::sorting::SerialisingMergingReadBack<SerObject, std::less<SerObject> >::HeapOrderAdapter>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, SerObject>*, std::vector<std::pair<long long unsigned int, SerObject>, std::allocator<std::pair<long long unsigned int, SerObject> > > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/MemoryFile.hpp:23,
from ./libmaus2/aio/MemoryFileAdapter.hpp:23,
from ./libmaus2/aio/MemoryFileContainer.hpp:22,
from ./libmaus2/aio/FileRemoval.hpp:22,
from test/testAIO.cpp:22:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, SerObject>}; _Tp = std::pair<long long unsigned int, SerObject>; _Alloc = std::allocator<std::pair<long long unsigned int, SerObject> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, SerObject>, std::allocator<std::pair<long long unsigned int, SerObject> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, SerObject>, std::allocator<std::pair<long long unsigned int, SerObject> > >::iterator’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testBitIO-testBitIO.o `test -f 'test/testBitIO.cpp' || echo './'`test/testBitIO.cpp
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::sorting::SerialisingMergingReadBack<_data_type, _order_type>::SerialisingMergingReadBack(const string&, const std::vector<typename libmaus2::aio::SerialisingSortingBufferedOutput<_data_type, _order_type>::BlockDescriptor>&, libmaus2::sorting::SerialisingMergingReadBack<_data_type, _order_type>::order_type&, uint64_t) [with _data_type = SerObject; _order_type = std::less<SerObject>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, SerObject>*, std::vector<std::pair<long long unsigned int, SerObject>, std::allocator<std::pair<long long unsigned int, SerObject> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘int main()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bitbtree::BitBTree<1, 1>::VectorConstructionTuple*, std::vector<libmaus2::bitbtree::BitBTree<1, 1>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<1, 1>::VectorConstructionTuple> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bitbtree::BitBTree<1, 1>::VectorConstructionTuple*, std::vector<libmaus2::bitbtree::BitBTree<1, 1>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<1, 1>::VectorConstructionTuple> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<SerObject, std::less<SerObject> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>}; _Tp = libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<SerObject, std::less<SerObject> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>; _Alloc = std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<SerObject, std::less<SerObject> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<SerObject, std::less<SerObject> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<SerObject, std::less<SerObject> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static void libmaus2::sorting::InPlaceParallelSort::mergestepRecLevel(iterator, uint64_t, uint64_t, order_type, base_sort&, int, int, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<iterator, order_type, base_sort> >&, uint64_t) [with iterator = char**; order_type = libmaus2::aio::SerialisingBuffer<SerObject, std::less<SerObject> >::Comparator; base_sort = libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<SerObject, std::less<SerObject> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<SerObject, std::less<SerObject> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<SerObject, std::less<SerObject> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testbtree-testbtree.o `test -f 'test/testbtree.cpp' || echo './'`test/testbtree.cpp
/usr/include/c++/10/bits/vector.tcc: In destructor ‘libmaus2::sorting::SerialisingSortingBufferedOutputFile<SerObject>::~SerialisingSortingBufferedOutputFile()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::aio::SerialisingSortingBufferedOutput<SerObject, std::less<SerObject> >::BlockDescriptor*, std::vector<libmaus2::aio::SerialisingSortingBufferedOutput<SerObject, std::less<SerObject> >::BlockDescriptor, std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<SerObject, std::less<SerObject> >::BlockDescriptor> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In destructor ‘std::unique_ptr<_Tp, _Dp>::~unique_ptr() [with _Tp = libmaus2::sorting::SerialisingSortingBufferedOutputFile<SerObject>; _Dp = std::default_delete<libmaus2::sorting::SerialisingSortingBufferedOutputFile<SerObject> >]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::aio::SerialisingSortingBufferedOutput<SerObject, std::less<SerObject> >::BlockDescriptor*, std::vector<libmaus2::aio::SerialisingSortingBufferedOutput<SerObject, std::less<SerObject> >::BlockDescriptor, std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<SerObject, std::less<SerObject> >::BlockDescriptor> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/GetFileSize.hpp:24,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/bitio/BitVectorInput.hpp:22,
from test/testBitIO.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/GetFileSize.hpp:24,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/bitio/BitVectorInput.hpp:22,
from test/testBitIO.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/GetFileSize.hpp:23,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/bitio/BitVectorInput.hpp:22,
from test/testBitIO.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/GetFileSize.hpp:23,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/bitio/BitVectorInput.hpp:22,
from test/testBitIO.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In function ‘void bubbleSortCheck()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/GetFileSize.hpp:24,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/bitio/BitVectorInput.hpp:22,
from test/testBitIO.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
test/testBitIO.cpp:280:1: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
280 | }
| ^
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static std::vector<typename libmaus2::aio::SerialisingSortingBufferedOutput<_data_type, _order_type>::BlockDescriptor> libmaus2::sorting::SerialisingMergingReadBack<_data_type, _order_type>::mergeStep(const string&, const std::vector<typename libmaus2::aio::SerialisingSortingBufferedOutput<_data_type, _order_type>::BlockDescriptor>&, libmaus2::sorting::SerialisingMergingReadBack<_data_type, _order_type>::order_type&, uint64_t, uint64_t) [with _data_type = SerObject; _order_type = std::less<SerObject>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, SerObject>*, std::vector<std::pair<long long unsigned int, SerObject>, std::allocator<std::pair<long long unsigned int, SerObject> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testBWTDyn-testBWTDyn.o `test -f 'test/testBWTDyn.cpp' || echo './'`test/testBWTDyn.cpp
/usr/include/c++/10/bits/vector.tcc: In member function ‘libmaus2::sorting::SerialisingSortingBufferedOutputFile<_data_type, _order_type>::merger_ptr_type libmaus2::sorting::SerialisingSortingBufferedOutputFile<_data_type, _order_type>::getMerger(uint64_t, uint64_t, int, std::ostream*) [with _data_type = SerObject; _order_type = std::less<SerObject>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::aio::SerialisingSortingBufferedOutput<SerObject, std::less<SerObject> >::BlockDescriptor*, std::vector<libmaus2::aio::SerialisingSortingBufferedOutput<SerObject, std::less<SerObject> >::BlockDescriptor, std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<SerObject, std::less<SerObject> >::BlockDescriptor> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::aio::SerialisingSortingBufferedOutput<SerObject, std::less<SerObject> >::BlockDescriptor*, std::vector<libmaus2::aio::SerialisingSortingBufferedOutput<SerObject, std::less<SerObject> >::BlockDescriptor, std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<SerObject, std::less<SerObject> >::BlockDescriptor> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static void libmaus2::sorting::SerialisingSortingBufferedOutputFile<_data_type, _order_type>::reduce(const std::vector<std::__cxx11::basic_string<char> >&, const string&, uint64_t, uint64_t, uint64_t, uint64_t, int, std::ostream*) [with _data_type = SerObject; _order_type = std::less<SerObject>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::aio::SerialisingSortingBufferedOutput<SerObject, std::less<SerObject> >::BlockDescriptor*, std::vector<libmaus2::aio::SerialisingSortingBufferedOutput<SerObject, std::less<SerObject> >::BlockDescriptor, std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<SerObject, std::less<SerObject> >::BlockDescriptor> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, SerObject>*, std::vector<std::pair<long long unsigned int, SerObject>, std::allocator<std::pair<long long unsigned int, SerObject> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/MemoryFile.hpp:23,
from ./libmaus2/aio/MemoryFileAdapter.hpp:23,
from ./libmaus2/aio/MemoryFileContainer.hpp:22,
from ./libmaus2/aio/FileRemoval.hpp:22,
from test/testAIO.cpp:22:
/usr/include/c++/10/bits/stl_vector.h: In function ‘void testSerialisingSorting()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<SerObject*, std::vector<SerObject> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/aio/MemoryFile.hpp:23,
from ./libmaus2/aio/MemoryFileAdapter.hpp:23,
from ./libmaus2/aio/MemoryFileContainer.hpp:22,
from ./libmaus2/aio/FileRemoval.hpp:22,
from test/testAIO.cpp:22:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<SerObject*, std::vector<SerObject> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<SerObject*, std::vector<SerObject> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<SerObject*, std::vector<SerObject> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testBWTHufDyn-testBWTHufDyn.o `test -f 'test/testBWTHufDyn.cpp' || echo './'`test/testBWTHufDyn.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testDivSufSort-testDivSufSort.o `test -f 'test/testDivSufSort.cpp' || echo './'`test/testDivSufSort.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/bitbtree/bitbtree.hpp:29,
from ./libmaus2/wavelet/DynamicWaveletTree.hpp:25,
from test/testBWTDyn.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/bitbtree/bitbtree.hpp:29,
from ./libmaus2/wavelet/DynamicWaveletTree.hpp:25,
from test/testBWTDyn.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeLeaf::symbolVector(std::vector<long long int>&) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/bitbtree/bitbtree.hpp:29,
from ./libmaus2/wavelet/DynamicHuffmanWaveletTree.hpp:23,
from test/testBWTHufDyn.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/bitbtree/bitbtree.hpp:29,
from ./libmaus2/wavelet/DynamicHuffmanWaveletTree.hpp:23,
from test/testBWTHufDyn.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeLeaf::symbolVector(std::vector<long long int>&) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bitio/CompactArray.hpp:23,
from test/testDivSufSort.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bitio/CompactArray.hpp:23,
from test/testDivSufSort.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::MemTempFileContainer::getOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::MemTempFileContainer::openOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bitio/CompactArray.hpp:23,
from test/testDivSufSort.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bitio/CompactArray.hpp:23,
from test/testDivSufSort.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual void libmaus2::util::MemTempFileContainer::closeOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bitio/CompactArray.hpp:23,
from test/testDivSufSort.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bitio/CompactArray.hpp:23,
from test/testDivSufSort.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::istream& libmaus2::util::MemTempFileContainer::openInputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bitio/CompactArray.hpp:23,
from test/testDivSufSort.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bitio/CompactArray.hpp:23,
from test/testDivSufSort.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::FileTempFileContainer::getOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::FileTempFileContainer::openOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bitio/CompactArray.hpp:23,
from test/testDivSufSort.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bitio/CompactArray.hpp:23,
from test/testDivSufSort.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::istream& libmaus2::util::FileTempFileContainer::openInputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In function ‘void testTempFileContainer()’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In function ‘static void libmaus2::lcp::SuccinctLCP<_lf_type, _sampled_sa_type, _sampled_isa_type>::writeSuccinctLCP(lf_type&, isa_type&, lcp_type&, std::ostream&, libmaus2::util::TempFileContainer&, uint64_t, std::ostream*) [with lf_type = libmaus2::lf::LF; isa_type = libmaus2::fm::SampledISA<libmaus2::lf::LF>; lcp_type = libmaus2::autoarray::AutoArray<long long int>; _lf_type = libmaus2::lf::LF; _sampled_sa_type = libmaus2::fm::SimpleSampledSA<libmaus2::lf::LF>; _sampled_isa_type = libmaus2::fm::SampledISA<libmaus2::lf::LF>]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testDNABitWords-testDNABitWords.o `test -f 'test/testDNABitWords.cpp' || echo './'`test/testDNABitWords.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testFastRead-testFastRead.o `test -f 'test/testFastRead.cpp' || echo './'`test/testFastRead.cpp
In file included from /usr/include/c++/10/vector:72,
from /usr/include/c++/10/functional:62,
from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
from /usr/include/c++/10/algorithm:74,
from ./libmaus2/fastx/acgtnMap.hpp:26,
from ./libmaus2/fastx/Pattern.hpp:26,
from test/testFastRead.cpp:22:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::fastx::FastInterval}; _Tp = libmaus2::fastx::FastInterval; _Alloc = std::allocator<libmaus2::fastx::FastInterval>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::fastx::FastInterval>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testHuffman-testHuffman.o `test -f 'test/testHuffman.cpp' || echo './'`test/testHuffman.cpp
In file included from /usr/include/c++/10/vector:67,
from /usr/include/c++/10/functional:62,
from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
from /usr/include/c++/10/algorithm:74,
from ./libmaus2/fastx/acgtnMap.hpp:26,
from ./libmaus2/fastx/Pattern.hpp:26,
from test/testFastRead.cpp:22:
/usr/include/c++/10/bits/stl_vector.h: In function ‘int main(int, char**)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from /usr/include/c++/10/functional:62,
from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
from /usr/include/c++/10/algorithm:74,
from ./libmaus2/fastx/acgtnMap.hpp:26,
from ./libmaus2/fastx/Pattern.hpp:26,
from test/testFastRead.cpp:22:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::fastx::FastInterval*, std::vector<libmaus2::fastx::FastInterval> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
test/testFastRead.cpp:127:1: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
127 | }
| ^
test/testFastRead.cpp:127:1: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testIsa-testIsa.o `test -f 'test/testIsa.cpp' || echo './'`test/testIsa.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testkmp-testkmp.o `test -f 'test/testkmp.cpp' || echo './'`test/testkmp.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testlz-testlz.o `test -f 'test/testlz.cpp' || echo './'`test/testlz.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from test/testHuffman.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from test/testHuffman.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/util/BorderArray.hpp:22,
from test/testkmp.cpp:21:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/util/BorderArray.hpp:22,
from test/testkmp.cpp:21:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static bool libmaus2::util::SuccinctBorderArray::check(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/util/BorderArray.hpp:22,
from test/testkmp.cpp:21:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/util/BorderArray.hpp:22,
from test/testkmp.cpp:21:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/util/BorderArray.hpp:22,
from test/testkmp.cpp:21:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/util/BorderArray.hpp:22,
from test/testkmp.cpp:21:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/util/BorderArray.hpp:22,
from test/testkmp.cpp:21:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long int}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In function ‘void findSplitCommon(const string&, uint64_t, uint64_t, int64_t)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/util/BorderArray.hpp:22,
from test/testkmp.cpp:21:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
test/testkmp.cpp:126:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
126 | }
| ^
test/testkmp.cpp:126:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:126:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:126:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:126:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:126:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:126:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:126:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:126:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:126:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/util/BorderArray.hpp:22,
from test/testkmp.cpp:21:
/usr/include/c++/10/bits/vector.tcc: In function ‘void testSimpleDynamic()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/util/BorderArray.hpp:22,
from test/testkmp.cpp:21:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
test/testkmp.cpp:94:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
94 | }
| ^
test/testkmp.cpp:94:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:94:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:94:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:94:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:94:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:94:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:94:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:94:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:94:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:94:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:94:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:94:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/util/BorderArray.hpp:22,
from test/testkmp.cpp:21:
/usr/include/c++/10/bits/vector.tcc: In function ‘void testLazyFailureFunctionRandom(const string&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/util/BorderArray.hpp:22,
from test/testkmp.cpp:21:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testRank-testRank.o `test -f 'test/testRank.cpp' || echo './'`test/testRank.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:23,
from test/testHuffman.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:23,
from test/testHuffman.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeLeaf::symbolVector(std::vector<long long int>&) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:23,
from test/testHuffman.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:23,
from test/testHuffman.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::wavelet::HuffmanWaveletTree::HuffmanWaveletTreeNavigationNode::offsetVector(std::vector<long long unsigned int>&) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:23,
from test/testHuffman.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:23,
from test/testHuffman.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In function ‘uint64_t libmaus2::wavelet::HuffmanWaveletTree::serialize(std::ostream&) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/GzipOutputStreamBuffer.hpp:24,
from ./libmaus2/lz/GzipOutputStream.hpp:22,
from test/testlz.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/GzipOutputStreamBuffer.hpp:24,
from ./libmaus2/lz/GzipOutputStream.hpp:22,
from test/testlz.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/lz/GzipOutputStreamBuffer.hpp:24,
from ./libmaus2/lz/GzipOutputStream.hpp:22,
from test/testlz.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘std::pair<std::vector<long long unsigned int>, std::vector<long long unsigned int> > libmaus2::huffman::EncodeTable<words>::symsOrderedByCode() const [with unsigned int words = 1]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/huffman/huffman.hpp:183,
from test/testHuffman.cpp:23:
./libmaus2/huffman/EncodeTable.hpp:148:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
148 | }
| ^
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from test/testHuffman.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1662 | __heap_select(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1937:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1937 | std::__heap_select(__first, __middle, __last, __comp);
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
In file included from test/testHuffman.cpp:27:
./libmaus2/huffman/HuffmanTree.hpp: In constructor ‘libmaus2::huffman::HuffmanTree::HuffmanTree(iterator, uint64_t, bool, bool, bool) [with iterator = std::_Rb_tree_iterator<std::pair<const long long int, long long unsigned int> >]’:
./libmaus2/huffman/HuffmanTree.hpp:643:4: note: parameter passing for argument of type ‘std::_Rb_tree_iterator<std::pair<const long long int, long long unsigned int> >’ changed in GCC 7.1
643 | HuffmanTree(iterator F, uint64_t const s, bool const sortbydepth = false, bool const rsetcode = false, bool const rdfsorder = false)
| ^~~~~~~~~~~
test/testHuffman.cpp: In function ‘void testHuffmanTree()’:
test/testHuffman.cpp:585:63: note: parameter passing for argument of type ‘std::_Rb_tree_iterator<std::pair<const long long int, long long unsigned int> >’ changed in GCC 7.1
585 | libmaus2::huffman::HuffmanTree H(M.begin(),M.size(),true,true);
| ^
test/testHuffman.cpp:601:148: note: parameter passing for argument of type ‘std::_Rb_tree_iterator<std::pair<const long long int, long long unsigned int> >’ changed in GCC 7.1
601 | libmaus2::huffman::HuffmanTree H3(M.begin(),M.size(),true /* sort leafs by depth */,true /* assign codes */,true /* order by inner nodes by dfs */);
| ^
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from test/testRank.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:23,
from test/testHuffman.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In function ‘void testRangeQuantile()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from test/testHuffman.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:23,
from test/testHuffman.cpp:20:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from test/testHuffman.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from test/testRank.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bitio::FastWriteBitWriterTemplate<_data_type, _data_iterator, basemask, fullmask, _write_safe>::writeInternal(N, unsigned int) [with N = long long unsigned int; _data_type = long long unsigned int; _data_iterator = std::back_insert_iterator<std::vector<long long unsigned int> >; _data_type basemask = 9223372036854775808; _data_type fullmask = 18446744073709551615; bool _write_safe = true]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/lz/GzipOutputStreamBuffer.hpp:24,
from ./libmaus2/lz/GzipOutputStream.hpp:22,
from test/testlz.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from test/testRank.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/lz/GzipOutputStreamBuffer.hpp:24,
from ./libmaus2/lz/GzipOutputStream.hpp:22,
from test/testlz.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/lz/GzipOutputStreamBuffer.hpp:24,
from ./libmaus2/lz/GzipOutputStream.hpp:22,
from test/testlz.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/lz/GzipOutputStreamBuffer.hpp:24,
from ./libmaus2/lz/GzipOutputStream.hpp:22,
from test/testlz.cpp:20:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/GzipOutputStreamBuffer.hpp:24,
from ./libmaus2/lz/GzipOutputStream.hpp:22,
from test/testlz.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from test/testlz.cpp:96:
./libmaus2/trie/TrieState.hpp:768:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
768 | }
| ^
./libmaus2/trie/TrieState.hpp:768:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from test/testlz.cpp:96:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In function ‘void checkStreams64(unsigned int)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from test/testRank.cpp:20:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/lz/GzipOutputStreamBuffer.hpp:24,
from ./libmaus2/lz/GzipOutputStream.hpp:22,
from test/testlz.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::util::ContainerGetObject<std::vector<unsigned char> >]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testToWaveletTreeBits-testToWaveletTreeBits.o `test -f 'test/testToWaveletTreeBits.cpp' || echo './'`test/testToWaveletTreeBits.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testWaveletExternal-testWaveletExternal.o `test -f 'test/testWaveletExternal.cpp' || echo './'`test/testWaveletExternal.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testTrie-testTrie.o `test -f 'test/testTrie.cpp' || echo './'`test/testTrie.cpp
/usr/include/c++/10/bits/stl_vector.h: In function ‘bool checkE2Append(unsigned int)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from test/testRank.cpp:20:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testbandedlcs-testbandedlcs.o `test -f 'test/testbandedlcs.cpp' || echo './'`test/testbandedlcs.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bitio/BitIOOutput.hpp:27,
from ./libmaus2/uint/uint.hpp:32,
from ./libmaus2/util/SimpleHashMapKeyPrint.hpp:24,
from ./libmaus2/util/SimpleHashMap.hpp:24,
from ./libmaus2/trie/TrieState.hpp:22,
from test/testTrie.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bitio/BitIOOutput.hpp:27,
from ./libmaus2/uint/uint.hpp:32,
from ./libmaus2/util/SimpleHashMapKeyPrint.hpp:24,
from ./libmaus2/util/SimpleHashMap.hpp:24,
from ./libmaus2/trie/TrieState.hpp:22,
from test/testTrie.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bitio/BitIOOutput.hpp:27,
from ./libmaus2/uint/uint.hpp:32,
from ./libmaus2/util/SimpleHashMapKeyPrint.hpp:24,
from ./libmaus2/util/SimpleHashMap.hpp:24,
from ./libmaus2/trie/TrieState.hpp:22,
from test/testTrie.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const libmaus2::trie::TrieState<char>* const&>, std::tuple<>}; _Key = const libmaus2::trie::TrieState<char>*; _Val = std::pair<const libmaus2::trie::TrieState<char>* const, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const libmaus2::trie::TrieState<char>* const, long long unsigned int> >; _Compare = std::less<const libmaus2::trie::TrieState<char>*>; _Alloc = std::allocator<std::pair<const libmaus2::trie::TrieState<char>* const, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::trie::TrieState<char>*, std::pair<const libmaus2::trie::TrieState<char>* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::trie::TrieState<char>* const, long long unsigned int> >, std::less<const libmaus2::trie::TrieState<char>*>, std::allocator<std::pair<const libmaus2::trie::TrieState<char>* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/bitio/BitIOOutput.hpp:24,
from ./libmaus2/uint/uint.hpp:32,
from ./libmaus2/util/SimpleHashMapKeyPrint.hpp:24,
from ./libmaus2/util/SimpleHashMap.hpp:24,
from ./libmaus2/trie/TrieState.hpp:22,
from test/testTrie.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bitio/BitIOOutput.hpp:27,
from ./libmaus2/uint/uint.hpp:32,
from ./libmaus2/util/SimpleHashMapKeyPrint.hpp:24,
from ./libmaus2/util/SimpleHashMap.hpp:24,
from ./libmaus2/trie/TrieState.hpp:22,
from test/testTrie.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘std::vector<libmaus2::trie::LinearTrieState<_char_type> > libmaus2::trie::Trie<_char_type>::toLinearStateVector() const [with _char_type = char]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::trie::TrieState<char>*, std::pair<const libmaus2::trie::TrieState<char>* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::trie::TrieState<char>* const, long long unsigned int> >, std::less<const libmaus2::trie::TrieState<char>*>, std::allocator<std::pair<const libmaus2::trie::TrieState<char>* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/bitio/BitIOOutput.hpp:24,
from ./libmaus2/uint/uint.hpp:32,
from ./libmaus2/util/SimpleHashMapKeyPrint.hpp:24,
from ./libmaus2/util/SimpleHashMap.hpp:24,
from ./libmaus2/trie/TrieState.hpp:22,
from test/testTrie.cpp:20:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from test/testTrie.cpp:20:
./libmaus2/trie/TrieState.hpp:705:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
705 | }
| ^
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/bitio/BitIOOutput.hpp:24,
from ./libmaus2/uint/uint.hpp:32,
from ./libmaus2/util/SimpleHashMapKeyPrint.hpp:24,
from ./libmaus2/util/SimpleHashMap.hpp:24,
from ./libmaus2/trie/TrieState.hpp:22,
from test/testTrie.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bitio/BitIOOutput.hpp:27,
from ./libmaus2/uint/uint.hpp:32,
from ./libmaus2/util/SimpleHashMapKeyPrint.hpp:24,
from ./libmaus2/util/SimpleHashMap.hpp:24,
from ./libmaus2/trie/TrieState.hpp:22,
from test/testTrie.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::trie::TrieState<char>*, std::pair<const libmaus2::trie::TrieState<char>* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::trie::TrieState<char>* const, long long unsigned int> >, std::less<const libmaus2::trie::TrieState<char>*>, std::allocator<std::pair<const libmaus2::trie::TrieState<char>* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/bitio/BitIOOutput.hpp:24,
from ./libmaus2/uint/uint.hpp:32,
from ./libmaus2/util/SimpleHashMapKeyPrint.hpp:24,
from ./libmaus2/util/SimpleHashMap.hpp:24,
from ./libmaus2/trie/TrieState.hpp:22,
from test/testTrie.cpp:20:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/bitio/BitIOOutput.hpp:24,
from ./libmaus2/uint/uint.hpp:32,
from ./libmaus2/util/SimpleHashMapKeyPrint.hpp:24,
from ./libmaus2/util/SimpleHashMap.hpp:24,
from ./libmaus2/trie/TrieState.hpp:22,
from test/testTrie.cpp:20:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bitio/BitIOOutput.hpp:27,
from ./libmaus2/uint/uint.hpp:32,
from ./libmaus2/util/SimpleHashMapKeyPrint.hpp:24,
from ./libmaus2/util/SimpleHashMap.hpp:24,
from ./libmaus2/trie/TrieState.hpp:22,
from test/testTrie.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from test/testTrie.cpp:20:
./libmaus2/trie/TrieState.hpp:768:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
768 | }
| ^
./libmaus2/trie/TrieState.hpp:768:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testbamwriter-testbamwriter.o `test -f 'test/testbamwriter.cpp' || echo './'`test/testbamwriter.cpp
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<unsigned int, long long unsigned int>}; _Tp = std::pair<unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<unsigned int, long long unsigned int>, std::allocator<std::pair<unsigned int, long long unsigned int> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<unsigned int, long long unsigned int>, std::allocator<std::pair<unsigned int, long long unsigned int> > >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::wavelet::WaveletTree<libmaus2::rank::ERank222BTemplate<long long unsigned int>, unsigned int>::RangeCountStackElement&}; _Tp = libmaus2::wavelet::WaveletTree<libmaus2::rank::ERank222BTemplate<long long unsigned int>, unsigned int>::RangeCountStackElement; _Alloc = std::allocator<libmaus2::wavelet::WaveletTree<libmaus2::rank::ERank222BTemplate<long long unsigned int>, unsigned int>::RangeCountStackElement>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::wavelet::WaveletTree<libmaus2::rank::ERank222BTemplate<long long unsigned int>, unsigned int>::RangeCountStackElement, std::allocator<libmaus2::wavelet::WaveletTree<libmaus2::rank::ERank222BTemplate<long long unsigned int>, unsigned int>::RangeCountStackElement> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<std::pair<_symbol_type, long long unsigned int> > libmaus2::wavelet::WaveletTree<_rank_type, _symbol_type>::rangeCountMax(uint64_t, uint64_t, uint64_t) const [with _rank_type = libmaus2::rank::ERank222BTemplate<long long unsigned int>; _symbol_type = unsigned int]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<unsigned int, long long unsigned int>*, std::vector<std::pair<unsigned int, long long unsigned int>, std::allocator<std::pair<unsigned int, long long unsigned int> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from test/testRank.cpp:20:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::wavelet::WaveletTree<libmaus2::rank::ERank222BTemplate<long long unsigned int>, unsigned int>::RangeCountStackElement*, std::vector<libmaus2::wavelet::WaveletTree<libmaus2::rank::ERank222BTemplate<long long unsigned int>, unsigned int>::RangeCountStackElement, std::allocator<libmaus2::wavelet::WaveletTree<libmaus2::rank::ERank222BTemplate<long long unsigned int>, unsigned int>::RangeCountStackElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::wavelet::WaveletTree<libmaus2::rank::ERank222BTemplate<long long unsigned int>, unsigned int>::RangeCountStackElement*, std::vector<libmaus2::wavelet::WaveletTree<libmaus2::rank::ERank222BTemplate<long long unsigned int>, unsigned int>::RangeCountStackElement, std::allocator<libmaus2::wavelet::WaveletTree<libmaus2::rank::ERank222BTemplate<long long unsigned int>, unsigned int>::RangeCountStackElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testarraydecode-testarraydecode.o `test -f 'test/testarraydecode.cpp' || echo './'`test/testarraydecode.cpp
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from test/testRank.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = unsigned int; _Val = std::pair<const unsigned int, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const unsigned int, long long unsigned int> >; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type ‘std::_Rb_tree<unsigned int, std::pair<const unsigned int, long long unsigned int>, std::_Select1st<std::pair<const unsigned int, long long unsigned int> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2193 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testsnappy-testsnappy.o `test -f 'test/testsnappy.cpp' || echo './'`test/testsnappy.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/GetFileSize.hpp:23,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/bitio/BitVectorConcat.hpp:24,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/GetFileSize.hpp:23,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/bitio/BitVectorConcat.hpp:24,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeLeaf::symbolVector(std::vector<long long int>&) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/GetFileSize.hpp:23,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/bitio/BitVectorConcat.hpp:24,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int>}; _Tp = std::pair<std::__cxx11::basic_string<char>, long long unsigned int>; _Alloc = std::allocator<std::pair<std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<std::__cxx11::basic_string<char>, long long unsigned int> >::iterator’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testsnappyconcat-testsnappyconcat.o `test -f 'test/testsnappyconcat.cpp' || echo './'`test/testsnappyconcat.cpp
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/GetFileSize.hpp:23,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/bitio/BitVectorConcat.hpp:24,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In function ‘uint64_t libmaus2::wavelet::ImpExternalWaveletGeneratorHuffmanParallel::createFinalStreamTemplate(ostream_type&, uint64_t) [with ostream_type = std::basic_ostream<char>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/GetFileSize.hpp:23,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from test/testsnappy.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/GetFileSize.hpp:23,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/bitio/BitVectorConcat.hpp:24,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In function ‘_ZN8libmaus27wavelet42ImpExternalWaveletGeneratorHuffmanParallel25createFinalStreamTemplateISoEEyRT_y._omp_fn.0’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long unsigned int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘_ZN8libmaus27wavelet49ImpExternalWaveletGeneratorCompactHuffmanParallel17createFinalStreamINS_3aio20OutputStreamInstanceEEEyRT_y._omp_fn.0’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long unsigned int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const libmaus2::huffman::HuffmanTreeInnerNode* const&>, std::tuple<>}; _Key = const libmaus2::huffman::HuffmanTreeInnerNode*; _Val = std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >; _Compare = std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>; _Alloc = std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeInnerNode::toDot(std::ostream&) const’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from test/testsnappy.cpp:25:
./libmaus2/lz/SnappyInputStreamArray.hpp: In constructor ‘libmaus2::lz::SnappyInputStreamArray::SnappyInputStreamArray(std::istream&, iterator, iterator) [with iterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >]’:
./libmaus2/lz/SnappyInputStreamArray.hpp:33:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
33 | SnappyInputStreamArray(std::istream & in, iterator offa, iterator offe)
| ^~~~~~~~~~~~~~~~~~~~~~
./libmaus2/lz/SnappyInputStreamArray.hpp:33:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
./libmaus2/lz/SnappyInputStreamArray.hpp:33:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/lz/CompressorObject.hpp:22,
from ./libmaus2/lz/SnappyCompressorObject.hpp:22,
from ./libmaus2/lz/SnappyCompressorObjectFactory.hpp:22,
from test/testsnappyconcat.cpp:22:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char, std::char_traits<char> > >&}; _Tp = libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >; _Alloc = std::allocator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> > >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >, std::allocator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> > > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/GetFileSize.hpp:23,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from test/testsnappy.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In function ‘void testSnappyStreamDual()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
test/testsnappy.cpp:109:80: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
109 | ::libmaus2::lz::SnappyInputStreamArray SISA(istr,offsets.begin(),offsets.end());
| ^
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/lz/CompressorObject.hpp:22,
from ./libmaus2/lz/SnappyCompressorObject.hpp:22,
from ./libmaus2/lz/SnappyCompressorObjectFactory.hpp:22,
from test/testsnappyconcat.cpp:22:
/usr/include/c++/10/bits/stl_vector.h: In function ‘void testConcat(const string&, const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >*, std::vector<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >, std::allocator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> > > > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >*, std::vector<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >, std::allocator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> > > > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >*, std::vector<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >, std::allocator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> > > > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testgunzip-testgunzip.o `test -f 'test/testgunzip.cpp' || echo './'`test/testgunzip.cpp
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/GetFileSize.hpp:23,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/bitio/BitVectorConcat.hpp:24,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In function ‘void testImpExternalWaveletGenerator()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from test/testbamwriter.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from test/testbamwriter.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from test/testbamwriter.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::aio::SingleFileFragmentMerge<libmaus2::bambam::BamIndexLinearChunk>::SingleFileFragmentMergeHeapComparator<libmaus2::bambam::BamIndexLinearChunk> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> > > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = long long int; _Val = std::pair<const long long int, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const long long int, long long unsigned int> >; _Compare = std::less<long long int>; _Alloc = std::allocator<std::pair<const long long int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2193 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<long long int&&>, std::tuple<>}; _Key = long long int; _Val = std::pair<const long long int, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const long long int, long long unsigned int> >; _Compare = std::less<long long int>; _Alloc = std::allocator<std::pair<const long long int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘std::map<long long int, long long unsigned int> libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<_rank_type>::enumerateSymbolsInRange(uint64_t, uint64_t) const [with _rank_type = libmaus2::rank::ImpCacheLineRank]’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2193 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<long long unsigned int&&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::aio::SingleFileFragmentMerge<libmaus2::bambam::BamIndexBinChunk>::SingleFileFragmentMergeHeapComparator<libmaus2::bambam::BamIndexBinChunk> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> > > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::MemTempFileContainer::getOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::MemTempFileContainer::openOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::wavelet::ImpExternalWaveletGeneratorCompactHuffman::ImpExternalWaveletGeneratorCompactHuffman(const libmaus2::huffman::HuffmanTree&, libmaus2::util::TempFileContainer&)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::istream& libmaus2::util::MemTempFileContainer::openInputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testhashcollisions-testhashcollisions.o `test -f 'test/testhashcollisions.cpp' || echo './'`test/testhashcollisions.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from test/testbamwriter.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::wavelet::ImpExternalWaveletGeneratorHuffmanParallel::ImpExternalWaveletGeneratorHuffmanParallel(const libmaus2::huffman::HuffmanTreeNode*, libmaus2::util::TempFileNameGenerator&, uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testsimplebloomcollisions-testsimplebloomcollisions.o `test -f 'test/testsimplebloomcollisions.cpp' || echo './'`test/testsimplebloomcollisions.cpp
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::wavelet::ImpHuffmanWaveletTree::init()’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::math::IntegerInterval<long long int>&}; _Tp = libmaus2::math::IntegerInterval<long long int>; _Alloc = std::allocator<libmaus2::math::IntegerInterval<long long int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::math::IntegerInterval<long long int>, std::allocator<libmaus2::math::IntegerInterval<long long int> > >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::math::IntegerInterval<long long int>, std::allocator<libmaus2::math::IntegerInterval<long long int> > >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘uint64_t libmaus2::bambam::BamHeader::addChromosome(const string&, uint64_t)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from test/testhashcollisions.cpp:23:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from test/testhashcollisions.cpp:23:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/wavelet/ImpExternalWaveletGeneratorCompactHuffman.hpp:33,
from test/testWaveletExternal.cpp:28:
./libmaus2/huffman/HuffmanTree.hpp: In constructor ‘libmaus2::huffman::HuffmanTree::HuffmanTree(iterator, uint64_t, bool, bool, bool) [with iterator = std::_Rb_tree_iterator<std::pair<const long long int, long long unsigned int> >]’:
./libmaus2/huffman/HuffmanTree.hpp:643:4: note: parameter passing for argument of type ‘std::_Rb_tree_iterator<std::pair<const long long int, long long unsigned int> >’ changed in GCC 7.1
643 | HuffmanTree(iterator F, uint64_t const s, bool const sortbydepth = false, bool const rsetcode = false, bool const rdfsorder = false)
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void testHashCollisions()’:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from test/testbamwriter.cpp:19:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In function ‘void testCompactHuffman()’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
test/testWaveletExternal.cpp:307:64: note: parameter passing for argument of type ‘std::_Rb_tree_iterator<std::pair<const long long int, long long unsigned int> >’ changed in GCC 7.1
307 | libmaus2::huffman::HuffmanTree H(F.begin(),F.size(),false,true);
| ^
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/GetFileSize.hpp:23,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/bitio/BitVectorConcat.hpp:24,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testsimplehash-testsimplehash.o `test -f 'test/testsimplehash.cpp' || echo './'`test/testsimplehash.cpp
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from test/testbamwriter.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In function ‘void testCompactHuffmanPar()’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
test/testWaveletExternal.cpp:372:64: note: parameter passing for argument of type ‘std::_Rb_tree_iterator<std::pair<const long long int, long long unsigned int> >’ changed in GCC 7.1
372 | libmaus2::huffman::HuffmanTree H(F.begin(),F.size(),false,true);
| ^
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/GetFileSize.hpp:23,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/bitio/BitVectorConcat.hpp:24,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testsimplecountinghash-testsimplecountinghash.o `test -f 'test/testsimplecountinghash.cpp' || echo './'`test/testsimplecountinghash.cpp
/usr/include/c++/10/bits/stl_map.h: In function ‘void testHuffmanWavelet()’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In function ‘void testHuffmanWaveletSer()’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from test/testbamwriter.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testcachealignedalloc-testcachealignedalloc.o `test -f 'test/testcachealignedalloc.cpp' || echo './'`test/testcachealignedalloc.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testsyncfastreaderbase-testsyncfastreaderbase.o `test -f 'test/testsyncfastreaderbase.cpp' || echo './'`test/testsyncfastreaderbase.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testdl-testdl.o `test -f 'test/testdl.cpp' || echo './'`test/testdl.cpp
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from test/testbamwriter.cpp:19:
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testdifenc-testdifenc.o `test -f 'test/testdifenc.cpp' || echo './'`test/testdifenc.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testbwtmergeinternal-testbwtmergeinternal.o `test -f 'test/testbwtmergeinternal.cpp' || echo './'`test/testbwtmergeinternal.cpp
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from test/testbamwriter.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::BamIndexGenerator::addBlock(const uint8_t*, uint64_t, uint64_t)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::math::IntegerInterval<long long int>*, std::vector<libmaus2::math::IntegerInterval<long long int>, std::allocator<libmaus2::math::IntegerInterval<long long int> > > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from test/testbamwriter.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>}; _Tp = std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>; _Alloc = std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from test/testbamwriter.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::aio::SingleFileFragmentMerge<libmaus2::bambam::BamIndexBinChunk>::SingleFileFragmentMergeHeapComparator<libmaus2::bambam::BamIndexBinChunk> >]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> > > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from test/testbamwriter.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static std::string libmaus2::aio::SingleFileFragmentMerge<_element_type>::merge(const string&, const std::vector<std::pair<long long unsigned int, long long unsigned int> >&) [with _element_type = libmaus2::bambam::BamIndexBinChunk]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testfastarewrite-testfastarewrite.o `test -f 'test/testfastarewrite.cpp' || echo './'`test/testfastarewrite.cpp
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>}; _Tp = std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>; _Alloc = std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from test/testbamwriter.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::aio::SingleFileFragmentMerge<libmaus2::bambam::BamIndexLinearChunk>::SingleFileFragmentMergeHeapComparator<libmaus2::bambam::BamIndexLinearChunk> >]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> > > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from test/testbamwriter.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static std::string libmaus2::aio::SingleFileFragmentMerge<_element_type>::merge(const string&, const std::vector<std::pair<long long unsigned int, long long unsigned int> >&) [with _element_type = libmaus2::bambam::BamIndexLinearChunk]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testfastarecode-testfastarecode.o `test -f 'test/testfastarecode.cpp' || echo './'`test/testfastarecode.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testfastarewrite.cpp:3:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::fastx::FastAReaderTemplate<libmaus2::aio::SynchronousFastReaderBase>::RewriteInfo&}; _Tp = libmaus2::fastx::FastAReaderTemplate<libmaus2::aio::SynchronousFastReaderBase>::RewriteInfo; _Alloc = std::allocator<libmaus2::fastx::FastAReaderTemplate<libmaus2::aio::SynchronousFastReaderBase>::RewriteInfo>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::fastx::FastAReaderTemplate<libmaus2::aio::SynchronousFastReaderBase>::RewriteInfo, std::allocator<libmaus2::fastx::FastAReaderTemplate<libmaus2::aio::SynchronousFastReaderBase>::RewriteInfo> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::fastx::FastAReaderTemplate<libmaus2::aio::SynchronousFastReaderBase>::RewriteInfo, std::allocator<libmaus2::fastx::FastAReaderTemplate<libmaus2::aio::SynchronousFastReaderBase>::RewriteInfo> >::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testfastarewrite.cpp:3:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::fastx::FastAReaderTemplate<_reader_base_type>::RewriteInfo> libmaus2::fastx::FastAReaderTemplate<_reader_base_type>::rewriteFilesToBuffer(const std::vector<std::__cxx11::basic_string<char> >&, buffer_type&) [with buffer_type = libmaus2::aio::SynchronousGenericOutput<char>; _reader_base_type = libmaus2::aio::SynchronousFastReaderBase]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::fastx::FastAReaderTemplate<libmaus2::aio::SynchronousFastReaderBase>::RewriteInfo*, std::vector<libmaus2::fastx::FastAReaderTemplate<libmaus2::aio::SynchronousFastReaderBase>::RewriteInfo, std::allocator<libmaus2::fastx::FastAReaderTemplate<libmaus2::aio::SynchronousFastReaderBase>::RewriteInfo> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testbamtofastq-testbamtofastq.o `test -f 'test/testbamtofastq.cpp' || echo './'`test/testbamtofastq.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testbamrange-testbamrange.o `test -f 'test/testbamrange.cpp' || echo './'`test/testbamrange.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testbamdamage-testbamdamage.o `test -f 'test/testbamdamage.cpp' || echo './'`test/testbamdamage.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testgamma-testgamma.o `test -f 'test/testgamma.cpp' || echo './'`test/testgamma.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/lz/GzipHeader.hpp:22,
from ./libmaus2/lz/GzipSingleStream.hpp:22,
from ./libmaus2/lz/GzipStream.hpp:22,
from ./libmaus2/lz/GzipStreamWrapper.hpp:22,
from ./libmaus2/lz/BufferedGzipStream.hpp:22,
from test/testbamdamage.cpp:1:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/lz/GzipHeader.hpp:22,
from ./libmaus2/lz/GzipSingleStream.hpp:22,
from ./libmaus2/lz/GzipStream.hpp:22,
from ./libmaus2/lz/GzipStreamWrapper.hpp:22,
from ./libmaus2/lz/BufferedGzipStream.hpp:22,
from test/testbamdamage.cpp:1:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamRangeDecoder.hpp:22,
from test/testbamrange.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamRangeDecoder.hpp:22,
from test/testbamrange.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/lz/GzipHeader.hpp:22,
from ./libmaus2/lz/GzipSingleStream.hpp:22,
from ./libmaus2/lz/GzipStream.hpp:22,
from ./libmaus2/lz/GzipStreamWrapper.hpp:22,
from ./libmaus2/lz/BufferedGzipStream.hpp:22,
from test/testbamdamage.cpp:1:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamRangeDecoder.hpp:22,
from test/testbamrange.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamdamage.cpp:3:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<long long unsigned int, long long unsigned int>&}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/lz/GzipHeader.hpp:22,
from ./libmaus2/lz/GzipSingleStream.hpp:22,
from ./libmaus2/lz/GzipStream.hpp:22,
from ./libmaus2/lz/GzipStreamWrapper.hpp:22,
from ./libmaus2/lz/BufferedGzipStream.hpp:22,
from test/testbamdamage.cpp:1:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamRangeDecoder.hpp:22,
from test/testbamrange.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/lz/GzipHeader.hpp:22,
from ./libmaus2/lz/GzipSingleStream.hpp:22,
from ./libmaus2/lz/GzipStream.hpp:22,
from ./libmaus2/lz/GzipStreamWrapper.hpp:22,
from ./libmaus2/lz/BufferedGzipStream.hpp:22,
from test/testbamdamage.cpp:1:
/usr/include/c++/10/bits/stl_algo.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >; _Distance = int; _Tp = libmaus2::gamma::SparseGammaGapMultiFile; _Compare = __gnu_cxx::__ops::_Iter_comp_val<std::less<libmaus2::gamma::SparseGammaGapMultiFile> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamRangeDecoder.hpp:22,
from test/testbamrange.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘void testLow()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘void testRandom(unsigned int)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::huffman::IndexEntry&}; _Tp = libmaus2::huffman::IndexEntry; _Alloc = std::allocator<libmaus2::huffman::IndexEntry>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::huffman::IndexEntry>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamdamage.cpp:3:
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::gamma::GammaRLEncoder::implicitFlush()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/lz/GzipHeader.hpp:22,
from ./libmaus2/lz/GzipSingleStream.hpp:22,
from ./libmaus2/lz/GzipStream.hpp:22,
from ./libmaus2/lz/GzipStreamWrapper.hpp:22,
from ./libmaus2/lz/BufferedGzipStream.hpp:22,
from test/testbamdamage.cpp:1:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::huffman::IndexEntry}; _Tp = libmaus2::huffman::IndexEntry; _Alloc = std::allocator<libmaus2::huffman::IndexEntry>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::huffman::IndexEntry>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {libmaus2::huffman::IndexEntry}; _Tp = libmaus2::huffman::IndexEntry; _Alloc = std::allocator<libmaus2::huffman::IndexEntry>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamRangeDecoder.hpp:22,
from test/testbamrange.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1662 | __heap_select(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1937:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1937 | std::__heap_select(__first, __middle, __last, __comp);
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamRangeDecoder.hpp:22,
from test/testbamrange.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘std::vector<std::pair<long long unsigned int, long long unsigned int> > libmaus2::bambam::BamIndex::reg2chunks(uint64_t, uint64_t, uint64_t) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamRangeDecoder.hpp:22,
from test/testbamrange.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::gamma::Interval}; _Tp = libmaus2::gamma::Interval; _Alloc = std::allocator<libmaus2::gamma::Interval>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::gamma::Interval>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::gamma::Interval>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::gamma::FlaggedInterval}; _Tp = libmaus2::gamma::FlaggedInterval; _Alloc = std::allocator<libmaus2::gamma::FlaggedInterval>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::gamma::FlaggedInterval>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamRangeDecoder.hpp:22,
from test/testbamrange.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamRangeDecoder.hpp:22,
from test/testbamrange.cpp:20:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamRangeDecoder.hpp:22,
from test/testbamrange.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static void libmaus2::gamma::GammaRLEncoder::concatenate(const std::vector<std::__cxx11::basic_string<char> >&, const string&, bool)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/gamma/SparseGammaGapFileSet.hpp:25,
from test/testgamma.cpp:44:
./libmaus2/gamma/GammaGapEncoder.hpp: In member function ‘void libmaus2::gamma::GammaGapEncoder::encode(iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >]’:
./libmaus2/gamma/GammaGapEncoder.hpp:154:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
154 | void encode(iterator ita, uint64_t const n)
| ^~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testcompact-testcompact.o `test -f 'test/testcompact.cpp' || echo './'`test/testcompact.cpp
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamRangeDecoder.hpp:22,
from test/testbamrange.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
./libmaus2/autoarray/AutoArray.hpp: In function ‘void testpartitionsingle()’:
./libmaus2/autoarray/AutoArray.hpp:1132:5: warning: ‘<anonymous>’ may be used uninitialized in this function [-Wmaybe-uninitialized]
1132 | array[i] = N();
| ^~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::Interval*, std::vector<libmaus2::gamma::Interval> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In function ‘void testgammarl()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamRangeDecoder.hpp:22,
from test/testbamrange.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In function ‘void testintervalsingle()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<long long unsigned int> libmaus2::gamma::SparseGammaGapFileIndexMultiDecoder::getSplitKeys(libmaus2::gamma::SparseGammaGapFileIndexMultiDecoder::this_type&, libmaus2::gamma::SparseGammaGapFileIndexMultiDecoder::this_type&, uint64_t, uint64_t&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘_ZN8libmaus25gamma39SparseGammaGapMultiFileLevelSetTemplateIyE12mergeToDenseERNS_4util21TempFileNameGeneratorEyy._omp_fn.0’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘static std::vector<long long unsigned int> libmaus2::gamma::SparseGammaGapFileIndexMultiDecoder::getSplitKeys(const std::vector<std::__cxx11::basic_string<char> >&, const std::vector<std::__cxx11::basic_string<char> >&, uint64_t, uint64_t&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::gamma::GammaGapEncoder::merge(const std::vector<std::vector<std::__cxx11::basic_string<char> > >&, const string&, uint64_t)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/gamma/SparseGammaGapFileSet.hpp:25,
from test/testgamma.cpp:44:
./libmaus2/gamma/GammaGapEncoder.hpp: In function ‘void testgammagap()’:
./libmaus2/gamma/GammaGapEncoder.hpp:168:11: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
168 | encode(ita,n);
| ~~~~~~^~~~~~~
./libmaus2/gamma/GammaGapEncoder.hpp:168:11: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
168 | encode(ita,n);
| ~~~~~~^~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testbytetocompact-testbytetocompact.o `test -f 'test/testbytetocompact.cpp' || echo './'`test/testbytetocompact.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::gamma::SparseGammaGapFile&}; _Tp = libmaus2::gamma::SparseGammaGapFile; _Alloc = std::allocator<libmaus2::gamma::SparseGammaGapFile>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::gamma::SparseGammaGapFile, std::allocator<libmaus2::gamma::SparseGammaGapFile> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::gamma::SparseGammaGapFile, std::allocator<libmaus2::gamma::SparseGammaGapFile> >::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void std::priority_queue<_Tp, _Sequence, _Compare>::push(const value_type&) [with _Tp = libmaus2::gamma::SparseGammaGapFile; _Sequence = std::vector<libmaus2::gamma::SparseGammaGapFile, std::allocator<libmaus2::gamma::SparseGammaGapFile> >; _Compare = std::less<libmaus2::gamma::SparseGammaGapFile>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapFile*, std::vector<libmaus2::gamma::SparseGammaGapFile, std::allocator<libmaus2::gamma::SparseGammaGapFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::gamma::SparseGammaGapMultiFile&}; _Tp = libmaus2::gamma::SparseGammaGapMultiFile; _Alloc = std::allocator<libmaus2::gamma::SparseGammaGapMultiFile>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void std::priority_queue<_Tp, _Sequence, _Compare>::push(const value_type&) [with _Tp = libmaus2::gamma::SparseGammaGapMultiFile; _Sequence = std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> >; _Compare = std::less<libmaus2::gamma::SparseGammaGapMultiFile>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘void testflaggedpartitionsingle()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::FlaggedInterval*, std::vector<libmaus2::gamma::FlaggedInterval> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::gamma::GammaFlaggedIntervalDecoder::GammaFlaggedIntervalDecoder(const std::vector<std::__cxx11::basic_string<char> >&, uint64_t, libmaus2::gamma::GammaFlaggedIntervalDecoder::init_mode)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In function ‘void testflaggedintervalsingle()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::FlaggedInterval*, std::vector<libmaus2::gamma::FlaggedInterval> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<long long unsigned int, long long unsigned int>&}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In function ‘_ZN8libmaus25gamma39SparseGammaGapMultiFileLevelSetTemplateINS_4math15UnsignedIntegerILj4EEEE12mergeToDenseERNS_4util21TempFileNameGeneratorEyy._omp_fn.0’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::Chromosome&}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘std::pair<string_type, string_type> std::__equal_range(_ForwardIterator, _ForwardIterator, const _Tp&, _CompareItTp, _CompareTpIt) [with _ForwardIterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >; _Tp = libmaus2::bambam::Chromosome; _CompareItTp = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::ChromosomeVectorMerge::ChromosomeIndexComparator>; _CompareTpIt = __gnu_cxx::__ops::_Val_comp_iter<libmaus2::bambam::ChromosomeVectorMerge::ChromosomeIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2136 | __equal_range(_ForwardIterator __first, _ForwardIterator __last,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > > >::const_iterator’ changed in GCC 7.1
2193 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testscramtosam-testscramtosam.o `test -f 'test/testscramtosam.cpp' || echo './'`test/testscramtosam.cpp
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::BamAlignmentDecoderInfo}; _Tp = libmaus2::bambam::BamAlignmentDecoderInfo; _Alloc = std::allocator<libmaus2::bambam::BamAlignmentDecoderInfo>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::BamAlignmentDecoderInfo>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In function ‘_ZN8libmaus25gamma39SparseGammaGapMultiFileLevelSetTemplateIyE5mergeERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEy._omp_fn.0’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::BamAlignmentHeapComparator<libmaus2::bambam::BamAlignmentNameComparator> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testpacdecode-testpacdecode.o `test -f 'test/testpacdecode.cpp' || echo './'`test/testpacdecode.cpp
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In function ‘_ZN8libmaus25gamma39SparseGammaGapMultiFileLevelSetTemplateINS_4math15UnsignedIntegerILj4EEEE5mergeERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEy._omp_fn.0’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<long long unsigned int&&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::gamma::SparseGammaGapFileLevelSetTemplate<_data_type>::addFile(const string&) [with _data_type = libmaus2::math::UnsignedInteger<4>]’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::gamma::SparseGammaGapFileLevelSetTemplate<_data_type>::addFile(const string&) [with _data_type = long long unsigned int]’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘typename libmaus2::gamma::SparseGammaGapMergeTemplate<_data_type>::SparseGammaGapMergeInfo* libmaus2::gamma::SparseGammaGapMultiFileLevelSetTemplate<_data_type>::queueMergeInfo(const libmaus2::gamma::SparseGammaGapMultiFile&, const libmaus2::gamma::SparseGammaGapMultiFile&) [with _data_type = long long unsigned int]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘typename libmaus2::gamma::SparseGammaGapMergeTemplate<_data_type>::SparseGammaGapMergeInfo* libmaus2::gamma::SparseGammaGapMultiFileLevelSetTemplate<_data_type>::queueMergeInfo(const libmaus2::gamma::SparseGammaGapMultiFile&, const libmaus2::gamma::SparseGammaGapMultiFile&) [with _data_type = libmaus2::math::UnsignedInteger<4>]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testutf8split-testutf8split.o `test -f 'test/testutf8split.cpp' || echo './'`test/testutf8split.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testcirchash-testcirchash.o `test -f 'test/testcirchash.cpp' || echo './'`test/testcirchash.cpp
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::gamma::SparseGammaGapMultiFileLevelSetTemplate<_data_type>::checkMerge() [with _data_type = long long unsigned int]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::gamma::SparseGammaGapMultiFileLevelSetTemplate<_data_type>::checkMerge() [with _data_type = libmaus2::math::UnsignedInteger<4>]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<long long unsigned int&&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2193 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::set<long long unsigned int> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::bambam::ChromosomeVectorMerge::ChromosomeVectorMerge(const std::vector<const std::vector<libmaus2::bambam::Chromosome>*>&, bool)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamCatHeader.hpp:26,
from ./libmaus2/bambam/BamMergeCoordinate.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:26,
from test/testbamtofastq.cpp:19:
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
279 | }
| ^
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
test/testutf8split.cpp: In function ‘void testUtf8Seek(const string&)’:
test/testutf8split.cpp:149:26: warning: comparison of unsigned expression in ‘>= 0’ is always true [-Wtype-limits]
149 | while ( (w=decwr.get()) >= 0 )
| ~~~~~~~~~~~~~~~~^~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In function ‘void testsparsegammamerge()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapFile*, std::vector<libmaus2::gamma::SparseGammaGapFile, std::allocator<libmaus2::gamma::SparseGammaGapFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::BamAlignmentHeapComparator<libmaus2::bambam::BamAlignmentNameComparator> >]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapFile*, std::vector<libmaus2::gamma::SparseGammaGapFile, std::allocator<libmaus2::gamma::SparseGammaGapFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::bambam::SnappyAlignmentMergeInput::SnappyAlignmentMergeInput(const std::vector<std::pair<long long unsigned int, long long unsigned int> >&, const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘void testsparsegammamerge2()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapFile*, std::vector<libmaus2::gamma::SparseGammaGapFile, std::allocator<libmaus2::gamma::SparseGammaGapFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapFile*, std::vector<libmaus2::gamma::SparseGammaGapFile, std::allocator<libmaus2::gamma::SparseGammaGapFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapFile*, std::vector<libmaus2::gamma::SparseGammaGapFile, std::allocator<libmaus2::gamma::SparseGammaGapFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘void testsparsegammamultimerge()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::bambam::ProgramHeaderLineSet::ProgramHeaderLineSet(const string&)’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘void testsparsegammamultimerge2()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
79 | __move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b,
| ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1819:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1819 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_vector.h: In member function ‘std::vector<std::__cxx11::basic_string<char> > libmaus2::gamma::SparseGammaGapMultiFileLevelSetTemplate<_data_type>::merge(const string&, uint64_t) [with _data_type = long long unsigned int]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In function ‘void testsparsegammamultifilesetmerge()’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In function ‘void testsparsegammamultifilesetmergedense()’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘std::vector<std::__cxx11::basic_string<char> > libmaus2::gamma::SparseGammaGapMultiFileLevelSetTemplate<_data_type>::merge(const string&, uint64_t) [with _data_type = libmaus2::math::UnsignedInteger<4>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In function ‘void testsparsegammamultifilesetmerge2()’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In function ‘void testsparsegammamultifilesetmergedense2()’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/gamma/GammaGenericBase.hpp:21,
from ./libmaus2/gamma/GammaGenericEncoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In function ‘void testsparsegammalevelmerge2()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapFile*, std::vector<libmaus2::gamma::SparseGammaGapFile, std::allocator<libmaus2::gamma::SparseGammaGapFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1662 | __heap_select(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1937:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1937 | std::__heap_select(__first, __middle, __last, __comp);
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘std::vector<std::pair<long long unsigned int, long long unsigned int> > libmaus2::bambam::BamIndex::reg2chunks(uint64_t, uint64_t, uint64_t) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘void testsparsegammalevelmerge()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapFile*, std::vector<libmaus2::gamma::SparseGammaGapFile, std::allocator<libmaus2::gamma::SparseGammaGapFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
./libmaus2/trie/TrieState.hpp:768:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
768 | }
| ^
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testutf8split.cpp:21:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testutf8split.cpp:21:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeLeaf::symbolVector(std::vector<long long int>&) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testutf8split.cpp:21:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testcirchash.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testcirchash.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::bambam::ProgramHeaderLinesMerge::ProgramHeaderLinesMerge(const std::vector<const std::__cxx11::basic_string<char>*>&)’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testutf8split.cpp:21:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const libmaus2::huffman::HuffmanTreeInnerNode* const&>, std::tuple<>}; _Key = const libmaus2::huffman::HuffmanTreeInnerNode*; _Val = std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >; _Compare = std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>; _Alloc = std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testutf8split.cpp:21:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeInnerNode::toDot(std::ostream&) const’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testutf8split.cpp:21:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = long long int; _Val = std::pair<const long long int, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const long long int, long long unsigned int> >; _Compare = std::less<long long int>; _Alloc = std::allocator<std::pair<const long long int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2193 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testutf8split.cpp:21:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<_rank_type>::unique_ptr_type libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<_rank_type>::load(const string&, uint64_t) [with _rank_type = libmaus2::rank::ImpCacheLineRank]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testutf8split.cpp:21:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testutf8split.cpp:21:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::FileTempFileContainer::getOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::FileTempFileContainer::openOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testutf8split.cpp:21:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testutf8split.cpp:21:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::istream& libmaus2::util::FileTempFileContainer::openInputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::wavelet::ImpExternalWaveletGeneratorHuffman::ImpExternalWaveletGeneratorHuffman(const libmaus2::huffman::HuffmanTreeNode*, libmaus2::util::TempFileContainer&)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::wavelet::ImpHuffmanWaveletTree::init()’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testcirchash.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::BamMergeCoordinateHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testutf8split.cpp:21:
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static libmaus2::wavelet::ImpHuffmanWaveletTree::unique_ptr_type libmaus2::wavelet::ImpHuffmanWaveletTree::load(const string&, uint64_t)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::BamMergeCoordinateHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘bool libmaus2::bambam::BamMergeTemplate<_heap_comparator_type, _sort_check_type>::readAlignmentInternal(bool) [with _heap_comparator_type = libmaus2::bambam::BamMergeCoordinateHeapComparator; _sort_check_type = libmaus2::bambam::BamCatHeader::IsCoordinateSorted]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::BamMergeTemplate<_heap_comparator_type, _sort_check_type>::init() [with _heap_comparator_type = libmaus2::bambam::BamMergeCoordinateHeapComparator; _sort_check_type = libmaus2::bambam::BamCatHeader::IsCoordinateSorted]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple}; _Tp = libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple; _Alloc = std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1924:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1924 | std::__move_median_to_first(__first, __first + 1, __mid, __last - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1925 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1924:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testcirchash.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::BamAlignmentHeapComparator<libmaus2::bambam::BamAlignmentNameComparator> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::bambam::ReadGroupVectorMerge::ReadGroupVectorMerge(const std::vector<const std::vector<libmaus2::bambam::ReadGroup>*>&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static void libmaus2::wavelet::Utf8ToImpCompactHuffmanWaveletTree::constructWaveletTree(const string&, const string&, const libmaus2::huffman::HuffmanTree*, uint64_t) [with bool radixsort = true]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static void libmaus2::wavelet::Utf8ToImpHuffmanWaveletTree::constructWaveletTree(const string&, const string&, libmaus2::huffman::HuffmanTreeNode::shared_ptr_type, uint64_t) [with bool radixsort = true]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testcirchash.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testcirchash.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::BamAlignmentHeapComparator<libmaus2::bambam::BamAlignmentNameComparator> >]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testcirchash.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::bambam::SnappyAlignmentMergeInput::SnappyAlignmentMergeInput(const std::vector<std::pair<long long unsigned int, long long unsigned int> >&, const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testutf8split.cpp:21:
/usr/include/c++/10/bits/stl_vector.h: In function ‘void testUtf8Bwt(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
test/testutf8split.cpp:131:1: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
131 | }
| ^
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::bambam::ProgramHeaderLineSet::ProgramHeaderLineSet(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateThreadPoolReader]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = std::__cxx11::basic_istringstream<char>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testcirchash.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testrmmtree-testrmmtree.o `test -f 'test/testrmmtree.cpp' || echo './'`test/testrmmtree.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testcirchash.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple}; _Tp = libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple; _Alloc = std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testcst-testcst.o `test -f 'test/testcst.cpp' || echo './'`test/testcst.cpp
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testcirchash.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testcirchash.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = std::__cxx11::basic_istringstream<char>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamAlignmentSortingCircularHashEntryOverflow::flush()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testcirchash.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘libmaus2::bambam::CircularHashCollatingBamDecoder::OutputBufferEntry* libmaus2::bambam::CircularHashCollatingBamDecoder::process()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamAlignmentSortingCircularHashEntryOverflow::flush()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testcirchash.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bitbtree::BitBTree<k, w>::mergeConstructionTuples(std::vector<libmaus2::bitbtree::BitBTree<k, w>::VectorConstructionTuple>&) [with unsigned int k = 8; unsigned int w = 8]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple*, std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::bambam::CircularHashCollatingBamDecoder::CircularHashCollatingBamDecoder(libmaus2::bambam::BamAlignmentDecoder&, const string&, uint32_t, unsigned int, uint64_t)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple*, std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple*, std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bitbtree::BitBTree<k, w>::mergeConstructionTuples(std::vector<libmaus2::bitbtree::BitBTree<k, w>::VectorConstructionTuple>&) [with unsigned int k = 8; unsigned int w = 8]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple*, std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::bambam::CircularHashCollatingBamDecoder::CircularHashCollatingBamDecoder(libmaus2::bambam::BamAlignmentDecoder&, const string&, uint32_t, unsigned int, uint64_t)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple*, std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple*, std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testbamcmp-testbamcmp.o `test -f 'test/testbamcmp.cpp' || echo './'`test/testbamcmp.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/bitio/CompactArray.hpp:23,
from ./libmaus2/util/ImpCompactNumberArray.hpp:24,
from ./libmaus2/rmq/RMMTree.hpp:22,
from test/testrmmtree.cpp:25:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/bitio/CompactArray.hpp:23,
from ./libmaus2/util/ImpCompactNumberArray.hpp:24,
from ./libmaus2/rmq/RMMTree.hpp:22,
from test/testrmmtree.cpp:25:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeLeaf::symbolVector(std::vector<long long int>&) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/bitio/CompactArray.hpp:23,
from ./libmaus2/util/ImpCompactNumberArray.hpp:24,
from ./libmaus2/rmq/RMMTree.hpp:22,
from test/testrmmtree.cpp:25:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testcst.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testcst.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeLeaf::symbolVector(std::vector<long long int>&) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testcst.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::suffixtree::CompressedSuffixTree::Node&}; _Tp = libmaus2::suffixtree::CompressedSuffixTree::Node; _Alloc = std::allocator<libmaus2::suffixtree::CompressedSuffixTree::Node>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::suffixtree::CompressedSuffixTree::Node>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testcst.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘libmaus2::suffixtree::CompressedSuffixTree::Node libmaus2::suffixtree::CompressedSuffixTree::child(const libmaus2::suffixtree::CompressedSuffixTree::Node&, int64_t)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::suffixtree::CompressedSuffixTree::Node*, std::vector<libmaus2::suffixtree::CompressedSuffixTree::Node> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bitio/CompactArray.hpp:23,
from ./libmaus2/util/ImpCompactNumberArray.hpp:24,
from ./libmaus2/rmq/RMMTree.hpp:22,
from test/testrmmtree.cpp:25:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const libmaus2::huffman::HuffmanTreeInnerNode* const&>, std::tuple<>}; _Key = const libmaus2::huffman::HuffmanTreeInnerNode*; _Val = std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >; _Compare = std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>; _Alloc = std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testcst.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long int, long long unsigned int>}; _Tp = std::pair<long long int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘virtual void libmaus2::huffman::HuffmanTreeLeaf::symbolDepthVector(std::vector<std::pair<long long int, long long unsigned int> >&, uint64_t) const’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long int, long long unsigned int>*, std::vector<std::pair<long long int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bitio/CompactArray.hpp:23,
from ./libmaus2/util/ImpCompactNumberArray.hpp:24,
from ./libmaus2/rmq/RMMTree.hpp:22,
from test/testrmmtree.cpp:25:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeInnerNode::toDot(std::ostream&) const’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bitio/CompactArray.hpp:23,
from ./libmaus2/util/ImpCompactNumberArray.hpp:24,
from ./libmaus2/rmq/RMMTree.hpp:22,
from test/testrmmtree.cpp:25:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bitio/CompactArray.hpp:23,
from ./libmaus2/util/ImpCompactNumberArray.hpp:24,
from ./libmaus2/rmq/RMMTree.hpp:22,
from test/testrmmtree.cpp:25:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::MemTempFileContainer::getOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::MemTempFileContainer::openOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bitio/CompactArray.hpp:23,
from ./libmaus2/util/ImpCompactNumberArray.hpp:24,
from ./libmaus2/rmq/RMMTree.hpp:22,
from test/testrmmtree.cpp:25:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bitio/CompactArray.hpp:23,
from ./libmaus2/util/ImpCompactNumberArray.hpp:24,
from ./libmaus2/rmq/RMMTree.hpp:22,
from test/testrmmtree.cpp:25:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::istream& libmaus2::util::MemTempFileContainer::openInputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bitio/CompactArray.hpp:23,
from ./libmaus2/util/ImpCompactNumberArray.hpp:24,
from ./libmaus2/rmq/RMMTree.hpp:22,
from test/testrmmtree.cpp:25:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = long long int; _Val = std::pair<const long long int, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const long long int, long long unsigned int> >; _Compare = std::less<long long int>; _Alloc = std::allocator<std::pair<const long long int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2193 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testcst.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const libmaus2::huffman::HuffmanTreeInnerNode* const&>, std::tuple<>}; _Key = const libmaus2::huffman::HuffmanTreeInnerNode*; _Val = std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >; _Compare = std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>; _Alloc = std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testcst.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeInnerNode::toDot(std::ostream&) const’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bitio/CompactArray.hpp:23,
from ./libmaus2/util/ImpCompactNumberArray.hpp:24,
from ./libmaus2/rmq/RMMTree.hpp:22,
from test/testrmmtree.cpp:25:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::wavelet::ImpExternalWaveletGeneratorHuffman::ImpExternalWaveletGeneratorHuffman(const libmaus2::huffman::HuffmanTreeNode*, libmaus2::util::TempFileContainer&)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testcst.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::wavelet::ImpHuffmanWaveletTree::init()’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<_rank_type>::unique_ptr_type libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<_rank_type>::load(const string&, uint64_t) [with _rank_type = libmaus2::rank::ImpCacheLineRank]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/bitio/CompactArray.hpp:23,
from ./libmaus2/util/ImpCompactNumberArray.hpp:24,
from ./libmaus2/rmq/RMMTree.hpp:22,
from test/testrmmtree.cpp:25:
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::wavelet::ImpHuffmanWaveletTree::ImpHuffmanWaveletTree(stream_type&) [with stream_type = std::__cxx11::basic_istringstream<char>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/bitio/CompactArray.hpp:23,
from ./libmaus2/util/ImpCompactNumberArray.hpp:24,
from ./libmaus2/rmq/RMMTree.hpp:22,
from test/testrmmtree.cpp:25:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘libmaus2::util::ImpCompactNumberArray::unique_ptr_type libmaus2::util::ImpCompactNumberArrayGenerator::createFinal()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testcst.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::wavelet::ImpHuffmanWaveletTree::init()’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testcst.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::wavelet::ImpHuffmanWaveletTree::ImpHuffmanWaveletTree(stream_type&) [with stream_type = libmaus2::aio::InputStreamInstance]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/bitio/CompactArray.hpp:23,
from ./libmaus2/util/ImpCompactNumberArray.hpp:24,
from ./libmaus2/rmq/RMMTree.hpp:22,
from test/testrmmtree.cpp:25:
/usr/include/c++/10/bits/vector.tcc: In function ‘int testImpCompactArray()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘int main(int, char**)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamAlignmentDecoderInfo*, std::vector<libmaus2::bambam::BamAlignmentDecoderInfo> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamAlignmentDecoderInfo*, std::vector<libmaus2::bambam::BamAlignmentDecoderInfo> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘int testRMMTree()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
test/testrmmtree.cpp:86:1: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
86 | }
| ^
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testbamdif-testbamdif.o `test -f 'test/testbamdif.cpp' || echo './'`test/testbamdif.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testqreorder-testqreorder.o `test -f 'test/testqreorder.cpp' || echo './'`test/testqreorder.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamcmp.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamcmp.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamcmp.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testqreorder.cpp:21:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testqreorder.cpp:21:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testqreorder.cpp:21:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testqreorder.cpp:21:
/usr/include/c++/10/bits/stl_vector.h: In function ‘std::vector<long long unsigned int> filter(const std::vector<long long unsigned int>&, uint64_t, unsigned int, unsigned int, unsigned int)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testqreorder.cpp:21:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testqreorder.cpp:21:
/usr/include/c++/10/bits/stl_vector.h: In function ‘std::vector<long long unsigned int> filter(const std::vector<long long unsigned int>&, uint64_t, unsigned int, unsigned int, unsigned int)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testqreorder.cpp:21:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testqreorder.cpp:21:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamcmp.cpp:19:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
In file included from test/testqreorder.cpp:22:
./libmaus2/fastx/QReorder.hpp: In constructor ‘libmaus2::fastx::QReorder4Set<_k, _value_type>::QReorder4Set(unsigned int, iterator, iterator, unsigned int) [with iterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; unsigned int _k = 2; _value_type = long long unsigned int]’:
./libmaus2/fastx/QReorder.hpp:868:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
868 | QReorder4Set(unsigned int l, iterator ita, iterator ite, unsigned int const rlookupbits)
| ^~~~~~~~~~~~
./libmaus2/fastx/QReorder.hpp:868:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamcmp.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testqreorder.cpp:21:
/usr/include/c++/10/bits/vector.tcc: In function ‘void testQReorder4Set()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
test/testqreorder.cpp:102:68: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
102 | libmaus2::fastx::QReorder4Set<k,uint64_t> QR(l,V.begin(),V.end(),2);
| ^
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamcmp.cpp:19:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamcmp.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamcmp.cpp:19:
./libmaus2/trie/TrieState.hpp:768:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
768 | }
| ^
./libmaus2/trie/TrieState.hpp:768:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testfqbgzf-testfqbgzf.o `test -f 'test/testfqbgzf.cpp' || echo './'`test/testfqbgzf.cpp
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamcmp.cpp:19:
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamcmp.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamdif.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamdif.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testcompactfastrandom-testcompactfastrandom.o `test -f 'test/testcompactfastrandom.cpp' || echo './'`test/testcompactfastrandom.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testfqbgzf.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testfqbgzf.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testfqbgzf.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >; _Distance = int; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::lz::BgzfThreadQueueElementHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
In file included from ./libmaus2/fastx/FastQReader.hpp:27,
from ./libmaus2/fastx/StreamFastQReader.hpp:23,
from test/testfqbgzf.cpp:23:
./libmaus2/fastx/FastInterval.hpp: In static member function ‘static libmaus2::fastx::FastInterval libmaus2::fastx::FastInterval::merge(iterator, iterator) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::fastx::FastInterval*, std::vector<libmaus2::fastx::FastInterval> >]’:
./libmaus2/fastx/FastInterval.hpp:85:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::fastx::FastInterval*, std::vector<libmaus2::fastx::FastInterval> >’ changed in GCC 7.1
85 | static FastInterval merge(iterator a, iterator e)
| ^~~~~
./libmaus2/fastx/FastInterval.hpp:85:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::fastx::FastInterval*, std::vector<libmaus2::fastx::FastInterval> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testfqbgzf.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::fastx::FastInterval&}; _Tp = libmaus2::fastx::FastInterval; _Alloc = std::allocator<libmaus2::fastx::FastInterval>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::fastx::FastInterval>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamdif.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::lz::BgzfThreadQueueElement&}; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Alloc = std::allocator<libmaus2::lz::BgzfThreadQueueElement>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testfqbgzf.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >; _Distance = int; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::lz::BgzfDeflateBlockIdComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >; _Distance = int; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::lz::BgzfDeflateBlockIdComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testfqbgzf.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::parallel::StdSynchronousConsecutiveHeap<value_type, info_type, compare>::drainPreQueue(glob_queue_type*) [with glob_queue_type = libmaus2::parallel::StdTerminatableSynchronousHeap<libmaus2::lz::BgzfThreadQueueElement, libmaus2::lz::BgzfThreadQueueElementHeapComparator>; value_type = libmaus2::lz::BgzfThreadQueueElement; info_type = libmaus2::lz::BgzfDeflateBlockIdInfo; compare = libmaus2::lz::BgzfDeflateBlockIdComparator]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::lz::BgzfDeflateParallel::drain()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::lz::BgzfDeflateParallel::flushInternal()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamdif.cpp:19:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::lz::BgzfDeflateParallelThreadCallable::run()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StringSerialisation.hpp:27,
from ./libmaus2/aio/FileFragment.hpp:25,
from ./libmaus2/aio/ReorderConcatGenericInput.hpp:24,
from ./libmaus2/fastx/CompactFastDecoder.hpp:22,
from test/testcompactfastrandom.cpp:1:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::fastx::FastInterval&}; _Tp = libmaus2::fastx::FastInterval; _Alloc = std::allocator<libmaus2::fastx::FastInterval>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::fastx::FastInterval>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::aio::FileFragment}; _Tp = libmaus2::aio::FileFragment; _Alloc = std::allocator<libmaus2::aio::FileFragment>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::aio::FileFragment>::iterator’ changed in GCC 7.1
In file included from test/testfqbgzf.cpp:38:
./libmaus2/clustering/KMeans.hpp: In function ‘static std::vector<double> libmaus2::clustering::KMeans::kmeansCore(iterator, uint64_t, uint64_t, bool, uint64_t, double, const dissimilarity_type&) [with iterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; dissimilarity_type = libmaus2::clustering::KMeans::SquareDissimilary]’:
./libmaus2/clustering/KMeans.hpp:371:31: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
371 | static std::vector<double> kmeansCore(
| ^~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testfqbgzf.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static std::vector<libmaus2::aio::FileFragment> libmaus2::fastx::CompactFastDecoder::getDataFragments(const std::vector<std::__cxx11::basic_string<char> >&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::aio::FileFragment*, std::vector<libmaus2::aio::FileFragment> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamdif.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::fastx::FastInterval}; _Tp = libmaus2::fastx::FastInterval; _Alloc = std::allocator<libmaus2::fastx::FastInterval>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::fastx::FastInterval>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from test/testfqbgzf.cpp:38:
./libmaus2/clustering/KMeans.hpp: In function ‘int main(int, char**)’:
./libmaus2/clustering/KMeans.hpp:527:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
527 | std::vector<double> R = kmeansCore(V,n,k,pp,maxloops,ethres,dissimilarity);
| ^
./libmaus2/clustering/KMeans.hpp:532:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
532 | std::vector<double> RC = kmeansCore(V,n,k,pp,maxloops,ethres,dissimilarity);
| ^~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testfqbgzf.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::fastx::FastInterval*, std::vector<libmaus2::fastx::FastInterval> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
test/testfqbgzf.cpp:288:75: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::fastx::FastInterval*, std::vector<libmaus2::fastx::FastInterval> >’ changed in GCC 7.1
288 | indexCOS << libmaus2::fastx::FastInterval::merge(FIV.begin(),FIV.end()).serialise();
| ^
test/testfqbgzf.cpp:298:74: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::fastx::FastInterval*, std::vector<libmaus2::fastx::FastInterval> >’ changed in GCC 7.1
298 | indexCOS << libmaus2::fastx::FastInterval::merge(FIV.begin(),FIV.end()).serialise();
| ^
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testbamindex-testbamindex.o `test -f 'test/testbamindex.cpp' || echo './'`test/testbamindex.cpp
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::fastx::CompactFastConcatRandomAccessAdapter::CompactFastConcatRandomAccessAdapter(const std::vector<std::__cxx11::basic_string<char> >&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::fastx::FastInterval*, std::vector<libmaus2::fastx::FastInterval> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StringSerialisation.hpp:27,
from ./libmaus2/aio/FileFragment.hpp:25,
from ./libmaus2/aio/ReorderConcatGenericInput.hpp:24,
from ./libmaus2/fastx/CompactFastDecoder.hpp:22,
from test/testcompactfastrandom.cpp:1:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::fastx::FastInterval*, std::vector<libmaus2::fastx::FastInterval> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamdif.cpp:19:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamdif.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamdif.cpp:19:
./libmaus2/trie/TrieState.hpp:768:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
768 | }
| ^
./libmaus2/trie/TrieState.hpp:768:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testbamrewrite-testbamrewrite.o `test -f 'test/testbamrewrite.cpp' || echo './'`test/testbamrewrite.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testfastqstream-testfastqstream.o `test -f 'test/testfastqstream.cpp' || echo './'`test/testfastqstream.cpp
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamdif.cpp:19:
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamdif.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testsort-testsort.o `test -f 'test/testsort.cpp' || echo './'`test/testsort.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/fastx/CharBuffer.hpp:22,
from ./libmaus2/aio/SynchronousFastReaderBase.hpp:24,
from ./libmaus2/fastx/FastQReader.hpp:23,
from ./libmaus2/fastx/StreamFastQReader.hpp:23,
from test/testfastqstream.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::fastx::FastInterval}; _Tp = libmaus2::fastx::FastInterval; _Alloc = std::allocator<libmaus2::fastx::FastInterval>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::fastx::FastInterval>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘void countReadsGzipFastqBlocks(const string&, const string&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::fastx::FastInterval*, std::vector<libmaus2::fastx::FastInterval> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘void decodeGzipFastqBlocks(const string&, const string&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::fastx::FastInterval*, std::vector<libmaus2::fastx::FastInterval> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testexternalsort-testexternalsort.o `test -f 'test/testexternalsort.cpp' || echo './'`test/testexternalsort.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testbamindex.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testbamindex.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testbamindex.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::aio::SingleFileFragmentMerge<libmaus2::bambam::BamIndexLinearChunk>::SingleFileFragmentMergeHeapComparator<libmaus2::bambam::BamIndexLinearChunk> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> > > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::aio::SingleFileFragmentMerge<libmaus2::bambam::BamIndexBinChunk>::SingleFileFragmentMergeHeapComparator<libmaus2::bambam::BamIndexBinChunk> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> > > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >; _Distance = int; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::lz::BgzfThreadQueueElementHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamrewrite.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testbamindex.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::math::IntegerInterval<long long int>&}; _Tp = libmaus2::math::IntegerInterval<long long int>; _Alloc = std::allocator<libmaus2::math::IntegerInterval<long long int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::math::IntegerInterval<long long int>, std::allocator<libmaus2::math::IntegerInterval<long long int> > >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::lz::BgzfThreadQueueElement&}; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Alloc = std::allocator<libmaus2::lz::BgzfThreadQueueElement>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> >::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::parallel::StdTerminatableSynchronousHeap<_value_type, _compare>::enque(libmaus2::parallel::StdTerminatableSynchronousHeap<_value_type, _compare>::value_type) [with _value_type = libmaus2::lz::BgzfThreadQueueElement; _compare = libmaus2::lz::BgzfThreadQueueElementHeapComparator]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::lz::BgzfInflateParallelContext::init()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::lz::BgzfInflateDeflateParallel::drain()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::lz::BgzfInflateDeflateParallel::write(const char*, uint64_t)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >; _Distance = int; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::lz::BgzfDeflateBlockIdComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamIndexGenerator.hpp:31,
from test/testbamindex.cpp:21:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamParallelRewrite.hpp:23,
from test/testbamrewrite.cpp:21:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/aio/BufferedOutput.hpp:23,
from ./libmaus2/sorting/MergingReadBack.hpp:23,
from ./libmaus2/sorting/SortingBufferedOutputFile.hpp:22,
from test/testexternalsort.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::sorting::MergingReadBack<long long unsigned int, std::less<long long unsigned int> >::HeapOrderAdapter>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/BufferedOutput.hpp:23,
from ./libmaus2/sorting/MergingReadBack.hpp:23,
from ./libmaus2/sorting/SortingBufferedOutputFile.hpp:22,
from test/testexternalsort.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testbamindex.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >; _Distance = int; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::lz::BgzfInflateBlockIdComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >; _Distance = int; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::lz::BgzfInflateBlockIdComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::sorting::MergingReadBack<_data_type, _order_type>::MergingReadBack(const string&, const std::vector<long long unsigned int>&, uint64_t, uint64_t) [with _data_type = long long unsigned int; _order_type = std::less<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::lz::BgzfDispatchDecompressBlock::decompressBlock(libmaus2::lz::BgzfInflateParallelContext&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >; _Distance = int; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::lz::BgzfDeflateBlockIdComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::lz::BgzfDispatchCompressBlock::compressBlock(libmaus2::lz::BgzfDeflateParallelContext&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::lz::BgzfDispatchWriteBlock::writeBlock(libmaus2::lz::BgzfDeflateParallelContext&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/GetFileSize.hpp:24,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/huffman/LFSupportBitDecoder.hpp:21,
from ./libmaus2/huffman/LFSupportDecoder.hpp:21,
from test/testsort.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<PSC>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/GetFileSize.hpp:24,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/huffman/LFSupportBitDecoder.hpp:21,
from ./libmaus2/huffman/LFSupportDecoder.hpp:21,
from test/testsort.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<PSC>]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testbamindex.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamParallelRewrite.hpp:23,
from test/testbamrewrite.cpp:21:
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamrewrite.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateDeflateParallelInputStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::bambam::BamParallelRewrite::BamParallelRewrite(std::istream&, std::ostream&, int, uint64_t, uint64_t, const std::vector<libmaus2::lz::BgzfDeflateOutputCallback*>*)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘int main(int, char**)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/GetFileSize.hpp:23,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/huffman/LFSupportBitDecoder.hpp:21,
from ./libmaus2/huffman/LFSupportDecoder.hpp:21,
from test/testsort.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/GetFileSize.hpp:23,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/huffman/LFSupportBitDecoder.hpp:21,
from ./libmaus2/huffman/LFSupportDecoder.hpp:21,
from test/testsort.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeLeaf::symbolVector(std::vector<long long int>&) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/GetFileSize.hpp:23,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/huffman/LFSupportBitDecoder.hpp:21,
from ./libmaus2/huffman/LFSupportDecoder.hpp:21,
from test/testsort.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static std::vector<long long unsigned int> libmaus2::sorting::MergingReadBack<_data_type, _order_type>::mergeStep(const string&, const std::vector<long long unsigned int>&, uint64_t, uint64_t) [with _data_type = long long unsigned int; _order_type = std::less<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘static std::vector<std::pair<long long unsigned int, long long unsigned int> > libmaus2::sorting::MergeStepBinSearchResult::mergeSplitVector(iterator, iterator, iterator, iterator, order_type, uint64_t) [with iterator = long long unsigned int*; order_type = std::less<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/GetFileSize.hpp:24,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/huffman/LFSupportBitDecoder.hpp:21,
from ./libmaus2/huffman/LFSupportDecoder.hpp:21,
from test/testsort.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<PSC>]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamIndexGenerator.hpp:31,
from test/testbamindex.cpp:21:
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/GetFileSize.hpp:23,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/huffman/LFSupportBitDecoder.hpp:21,
from ./libmaus2/huffman/LFSupportDecoder.hpp:21,
from test/testsort.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::gamma::GammaPDIndexDecoder::GammaPDIndexDecoder(const std::vector<std::__cxx11::basic_string<char> >&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/GetFileSize.hpp:23,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/huffman/LFSupportBitDecoder.hpp:21,
from ./libmaus2/huffman/LFSupportDecoder.hpp:21,
from test/testsort.cpp:20:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::aio::SortingBufferedOutput<_data_type, _order_type>::writeBuffer() [with _data_type = long long unsigned int; _order_type = std::less<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/GetFileSize.hpp:23,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/huffman/LFSupportBitDecoder.hpp:21,
from ./libmaus2/huffman/LFSupportDecoder.hpp:21,
from test/testsort.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::huffman::LFRankPosIndexDecoder::LFRankPosIndexDecoder(const std::vector<std::__cxx11::basic_string<char> >&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/GetFileSize.hpp:23,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/huffman/LFSupportBitDecoder.hpp:21,
from ./libmaus2/huffman/LFSupportDecoder.hpp:21,
from test/testsort.cpp:20:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘int main()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
test/testexternalsort.cpp:47:1: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
47 | }
| ^
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testbamindex.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::BamIndexGenerator::addBlock.constprop(const uint8_t*, uint64_t, uint64_t)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::math::IntegerInterval<long long int>*, std::vector<libmaus2::math::IntegerInterval<long long int>, std::allocator<libmaus2::math::IntegerInterval<long long int> > > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testcollatespeed-testcollatespeed.o `test -f 'test/testcollatespeed.cpp' || echo './'`test/testcollatespeed.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testbamindex.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>}; _Tp = std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>; _Alloc = std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testbamindex.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::aio::SingleFileFragmentMerge<libmaus2::bambam::BamIndexBinChunk>::SingleFileFragmentMergeHeapComparator<libmaus2::bambam::BamIndexBinChunk> >]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> > > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testbamheaderparser-testbamheaderparser.o `test -f 'test/testbamheaderparser.cpp' || echo './'`test/testbamheaderparser.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testbamindex.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static std::string libmaus2::aio::SingleFileFragmentMerge<_element_type>::merge(const string&, const std::vector<std::pair<long long unsigned int, long long unsigned int> >&) [with _element_type = libmaus2::bambam::BamIndexBinChunk]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>}; _Tp = std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>; _Alloc = std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testbamindex.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::aio::SingleFileFragmentMerge<libmaus2::bambam::BamIndexLinearChunk>::SingleFileFragmentMergeHeapComparator<libmaus2::bambam::BamIndexLinearChunk> >]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> > > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testbamindex.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static std::string libmaus2::aio::SingleFileFragmentMerge<_element_type>::merge(const string&, const std::vector<std::pair<long long unsigned int, long long unsigned int> >&) [with _element_type = libmaus2::bambam::BamIndexLinearChunk]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘void testMultiSort()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/GetFileSize.hpp:24,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/huffman/LFSupportBitDecoder.hpp:21,
from ./libmaus2/huffman/LFSupportDecoder.hpp:21,
from test/testsort.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1662 | __heap_select(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1937:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1937 | std::__heap_select(__first, __middle, __last, __comp);
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/GetFileSize.hpp:23,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/huffman/LFSupportBitDecoder.hpp:21,
from ./libmaus2/huffman/LFSupportDecoder.hpp:21,
from test/testsort.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<unsigned int*, std::less<unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>}; _Tp = libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<unsigned int*, std::less<unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>; _Alloc = std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<unsigned int*, std::less<unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<unsigned int*, std::less<unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<unsigned int*, std::less<unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘static void libmaus2::sorting::InPlaceParallelSort::mergestepRecLevel(iterator, uint64_t, uint64_t, order_type, base_sort&, int, int, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<iterator, order_type, base_sort> >&, uint64_t) [with iterator = unsigned int*; order_type = std::less<unsigned int>; base_sort = libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<unsigned int*, std::less<unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<unsigned int*, std::less<unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<unsigned int*, std::less<unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>}; _Tp = libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>; _Alloc = std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘static void libmaus2::sorting::InPlaceParallelSort::mergestepRecLevel(iterator, uint64_t, uint64_t, order_type, base_sort&, int, int, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<iterator, order_type, base_sort> >&, uint64_t) [with iterator = std::pair<long long unsigned int, long long unsigned int>*; order_type = libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>; base_sort = libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>}; _Tp = libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>; _Alloc = std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘static void libmaus2::sorting::InPlaceParallelSort::mergestepRecLevel(iterator, uint64_t, uint64_t, order_type, base_sort&, int, int, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<iterator, order_type, base_sort> >&, uint64_t) [with iterator = std::pair<long long unsigned int, long long unsigned int>*; order_type = libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>; base_sort = libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>&}; _Tp = libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>; _Alloc = std::allocator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/GetFileSize.hpp:23,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/huffman/LFSupportBitDecoder.hpp:21,
from ./libmaus2/huffman/LFSupportDecoder.hpp:21,
from test/testsort.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static uint64_t libmaus2::sorting::PairFileSorting::reduce(const string&, uint64_t, uint64_t, out_type&, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static uint64_t libmaus2::sorting::PairFileSorting::reduce(const string&, uint64_t, uint64_t, out_type&, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testbammergecoordinate-testbammergecoordinate.o `test -f 'test/testbammergecoordinate.cpp' || echo './'`test/testbammergecoordinate.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testbammergecollate-testbammergecollate.o `test -f 'test/testbammergecollate.cpp' || echo './'`test/testbammergecollate.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testcollatespeed.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testcollatespeed.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = true; bool keepsecond = true]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = true; bool keepsecond = true]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/GetFileSize.hpp:24,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/huffman/LFSupportBitDecoder.hpp:21,
from ./libmaus2/huffman/LFSupportDecoder.hpp:21,
from test/testsort.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void testpairfilesortingSecond(uint64_t)’:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void testpairfilesorting(uint64_t)’:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testcollatespeed.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testcollatespeed.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::BamAlignmentHeapComparator<libmaus2::bambam::BamAlignmentNameComparator> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testcollatespeed.cpp:21:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testcollatespeed.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::BamAlignmentHeapComparator<libmaus2::bambam::BamAlignmentNameComparator> >]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testcollatespeed.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::bambam::SnappyAlignmentMergeInput::SnappyAlignmentMergeInput(const std::vector<std::pair<long long unsigned int, long long unsigned int> >&, const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testbammergequeryname-testbammergequeryname.o `test -f 'test/testbammergequeryname.cpp' || echo './'`test/testbammergequeryname.cpp
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testcollatespeed.cpp:20:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testcollatespeed.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testcollatespeed.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple}; _Tp = libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple; _Alloc = std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple}; _Tp = libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple; _Alloc = std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple*, std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testcollatespeed.cpp:21:
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testcollatespeed.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamAlignmentSortingCircularHashEntryOverflow::flush()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testcollatespeed.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘libmaus2::bambam::CircularHashCollatingBamDecoder::OutputBufferEntry* libmaus2::bambam::CircularHashCollatingBamDecoder::process()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testcollatespeed.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bitbtree::BitBTree<k, w>::mergeConstructionTuples(std::vector<libmaus2::bitbtree::BitBTree<k, w>::VectorConstructionTuple>&) [with unsigned int k = 8; unsigned int w = 8]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple*, std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘int main(int, char**)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple*, std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<long long unsigned int, long long unsigned int>&}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::Chromosome&}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘std::pair<_FIter, _FIter> std::__equal_range(_ForwardIterator, _ForwardIterator, const _Tp&, _CompareItTp, _CompareTpIt) [with _ForwardIterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >; _Tp = libmaus2::bambam::Chromosome; _CompareItTp = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::ChromosomeVectorMerge::ChromosomeIndexComparator>; _CompareTpIt = __gnu_cxx::__ops::_Val_comp_iter<libmaus2::bambam::ChromosomeVectorMerge::ChromosomeIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2136 | __equal_range(_ForwardIterator __first, _ForwardIterator __last,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::BamAlignmentDecoderInfo}; _Tp = libmaus2::bambam::BamAlignmentDecoderInfo; _Alloc = std::allocator<libmaus2::bambam::BamAlignmentDecoderInfo>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::BamAlignmentDecoderInfo>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static std::vector<libmaus2::bambam::BamAlignmentDecoderInfo> libmaus2::bambam::BamAlignmentDecoderInfo::filenameToInfo(const std::vector<std::__cxx11::basic_string<char> >&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamAlignmentDecoderInfo*, std::vector<libmaus2::bambam::BamAlignmentDecoderInfo> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<long long unsigned int, long long unsigned int>&}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::Chromosome&}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘std::pair<string_type, string_type> std::__equal_range(_ForwardIterator, _ForwardIterator, const _Tp&, _CompareItTp, _CompareTpIt) [with _ForwardIterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >; _Tp = libmaus2::bambam::Chromosome; _CompareItTp = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::ChromosomeVectorMerge::ChromosomeIndexComparator>; _CompareTpIt = __gnu_cxx::__ops::_Val_comp_iter<libmaus2::bambam::ChromosomeVectorMerge::ChromosomeIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2136 | __equal_range(_ForwardIterator __first, _ForwardIterator __last,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::BamAlignmentDecoderInfo}; _Tp = libmaus2::bambam::BamAlignmentDecoderInfo; _Alloc = std::allocator<libmaus2::bambam::BamAlignmentDecoderInfo>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::BamAlignmentDecoderInfo>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static std::vector<libmaus2::bambam::BamAlignmentDecoderInfo> libmaus2::bambam::BamAlignmentDecoderInfo::filenameToInfo(const std::vector<std::__cxx11::basic_string<char> >&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamAlignmentDecoderInfo*, std::vector<libmaus2::bambam::BamAlignmentDecoderInfo> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::BamAlignmentHeapComparator<libmaus2::bambam::BamAlignmentNameComparator> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<long long unsigned int, long long unsigned int>&}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::Chromosome&}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘std::pair<_FIter, _FIter> std::__equal_range(_ForwardIterator, _ForwardIterator, const _Tp&, _CompareItTp, _CompareTpIt) [with _ForwardIterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >; _Tp = libmaus2::bambam::Chromosome; _CompareItTp = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::ChromosomeVectorMerge::ChromosomeIndexComparator>; _CompareTpIt = __gnu_cxx::__ops::_Val_comp_iter<libmaus2::bambam::ChromosomeVectorMerge::ChromosomeIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2136 | __equal_range(_ForwardIterator __first, _ForwardIterator __last,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::BamAlignmentDecoderInfo}; _Tp = libmaus2::bambam::BamAlignmentDecoderInfo; _Alloc = std::allocator<libmaus2::bambam::BamAlignmentDecoderInfo>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::BamAlignmentDecoderInfo>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static std::vector<libmaus2::bambam::BamAlignmentDecoderInfo> libmaus2::bambam::BamAlignmentDecoderInfo::filenameToInfo(const std::vector<std::__cxx11::basic_string<char> >&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamAlignmentDecoderInfo*, std::vector<libmaus2::bambam::BamAlignmentDecoderInfo> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testbamcat-testbamcat.o `test -f 'test/testbamcat.cpp' || echo './'`test/testbamcat.cpp
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2193 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::set<long long unsigned int> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamCatHeader.hpp:22,
from ./libmaus2/bambam/BamMergeQueryName.hpp:22,
from test/testbammergequeryname.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::bambam::ChromosomeVectorMerge::ChromosomeVectorMerge(const std::vector<const std::vector<libmaus2::bambam::Chromosome>*>&, bool)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2193 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
In file included from ./libmaus2/bambam/BamCatHeader.hpp:26,
from ./libmaus2/bambam/BamMergeCoordinate.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:26,
from test/testbammergecollate.cpp:19:
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
279 | }
| ^
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::BamAlignmentHeapComparator<libmaus2::bambam::BamAlignmentNameComparator> >]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::set<long long unsigned int> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::bambam::SnappyAlignmentMergeInput::SnappyAlignmentMergeInput(const std::vector<std::pair<long long unsigned int, long long unsigned int> >&, const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::bambam::ChromosomeVectorMerge::ChromosomeVectorMerge(const std::vector<const std::vector<libmaus2::bambam::Chromosome>*>&, bool)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamCatHeader.hpp:26,
from ./libmaus2/bambam/BamMergeQueryName.hpp:22,
from test/testbammergequeryname.cpp:20:
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
279 | }
| ^
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::bambam::ProgramHeaderLineSet::ProgramHeaderLineSet(const string&)’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::bambam::ProgramHeaderLineSet::ProgramHeaderLineSet(const string&)’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
79 | __move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b,
| ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1819:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1819 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
79 | __move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b,
| ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1819:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1819 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1662 | __heap_select(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1937:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1937 | std::__heap_select(__first, __middle, __last, __comp);
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1662 | __heap_select(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1937:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1937 | std::__heap_select(__first, __middle, __last, __comp);
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘std::vector<std::pair<long long unsigned int, long long unsigned int> > libmaus2::bambam::BamIndex::reg2chunks(uint64_t, uint64_t, uint64_t) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘std::vector<std::pair<long long unsigned int, long long unsigned int> > libmaus2::bambam::BamIndex::reg2chunks(uint64_t, uint64_t, uint64_t) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamCatHeader.hpp:22,
from ./libmaus2/bambam/BamMergeQueryName.hpp:22,
from test/testbammergequeryname.cpp:20:
./libmaus2/trie/TrieState.hpp:768:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
768 | }
| ^
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::bambam::ProgramHeaderLinesMerge::ProgramHeaderLinesMerge(const std::vector<const std::__cxx11::basic_string<char>*>&)’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
./libmaus2/trie/TrieState.hpp:768:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
768 | }
| ^
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::bambam::ProgramHeaderLinesMerge::ProgramHeaderLinesMerge(const std::vector<const std::__cxx11::basic_string<char>*>&)’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::BamMergeQueyNameHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::BamMergeQueyNameHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘bool libmaus2::bambam::BamMergeTemplate<_heap_comparator_type, _sort_check_type>::readAlignmentInternal(bool) [with _heap_comparator_type = libmaus2::bambam::BamMergeQueyNameHeapComparator; _sort_check_type = libmaus2::bambam::BamCatHeader::IsQueryNameSorted]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1924:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1924 | std::__move_median_to_first(__first, __first + 1, __mid, __last - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1925 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1924:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::bambam::ReadGroupVectorMerge::ReadGroupVectorMerge(const std::vector<const std::vector<libmaus2::bambam::ReadGroup>*>&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::BamMergeCoordinateHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::BamMergeCoordinateHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘bool libmaus2::bambam::BamMergeTemplate<_heap_comparator_type, _sort_check_type>::readAlignmentInternal(bool) [with _heap_comparator_type = libmaus2::bambam::BamMergeCoordinateHeapComparator; _sort_check_type = libmaus2::bambam::BamCatHeader::IsCoordinateSorted]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::BamMergeTemplate<_heap_comparator_type, _sort_check_type>::init() [with _heap_comparator_type = libmaus2::bambam::BamMergeCoordinateHeapComparator; _sort_check_type = libmaus2::bambam::BamCatHeader::IsCoordinateSorted]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple}; _Tp = libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple; _Alloc = std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1924:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1924 | std::__move_median_to_first(__first, __first + 1, __mid, __last - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1925 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1924:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::bambam::ReadGroupVectorMerge::ReadGroupVectorMerge(const std::vector<const std::vector<libmaus2::bambam::ReadGroup>*>&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateThreadPoolReader]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = std::__cxx11::basic_istringstream<char>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamCatHeader.hpp:22,
from ./libmaus2/bambam/BamMergeQueryName.hpp:22,
from test/testbammergequeryname.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = std::__cxx11::basic_istringstream<char>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamAlignmentSortingCircularHashEntryOverflow::flush()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bitbtree::BitBTree<k, w>::mergeConstructionTuples(std::vector<libmaus2::bitbtree::BitBTree<k, w>::VectorConstructionTuple>&) [with unsigned int k = 8; unsigned int w = 8]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple*, std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<long long unsigned int, long long unsigned int>&}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::Chromosome&}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::bambam::CircularHashCollatingBamDecoder::CircularHashCollatingBamDecoder(libmaus2::bambam::BamAlignmentDecoder&, const string&, uint32_t, unsigned int, uint64_t)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple*, std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple*, std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateThreadPoolReader]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘std::pair<_FIter, _FIter> std::__equal_range(_ForwardIterator, _ForwardIterator, const _Tp&, _CompareItTp, _CompareTpIt) [with _ForwardIterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >; _Tp = libmaus2::bambam::Chromosome; _CompareItTp = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::ChromosomeVectorMerge::ChromosomeIndexComparator>; _CompareTpIt = __gnu_cxx::__ops::_Val_comp_iter<libmaus2::bambam::ChromosomeVectorMerge::ChromosomeIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2136 | __equal_range(_ForwardIterator __first, _ForwardIterator __last,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::BamAlignmentDecoderInfo}; _Tp = libmaus2::bambam::BamAlignmentDecoderInfo; _Alloc = std::allocator<libmaus2::bambam::BamAlignmentDecoderInfo>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::BamAlignmentDecoderInfo>::iterator’ changed in GCC 7.1
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamCatHeader.hpp:22,
from ./libmaus2/bambam/BamCat.hpp:22,
from test/testbamcat.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2193 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::set<long long unsigned int> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::bambam::ChromosomeVectorMerge::ChromosomeVectorMerge(const std::vector<const std::vector<libmaus2::bambam::Chromosome>*>&, bool)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamCatHeader.hpp:26,
from ./libmaus2/bambam/BamCat.hpp:22,
from test/testbamcat.cpp:20:
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
279 | }
| ^
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::bambam::ProgramHeaderLineSet::ProgramHeaderLineSet(const string&)’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
79 | __move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b,
| ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1819:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1819 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1662 | __heap_select(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1937:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1937 | std::__heap_select(__first, __middle, __last, __comp);
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘std::vector<std::pair<long long unsigned int, long long unsigned int> > libmaus2::bambam::BamIndex::reg2chunks(uint64_t, uint64_t, uint64_t) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamCatHeader.hpp:22,
from ./libmaus2/bambam/BamCat.hpp:22,
from test/testbamcat.cpp:20:
./libmaus2/trie/TrieState.hpp:768:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
768 | }
| ^
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::bambam::ProgramHeaderLinesMerge::ProgramHeaderLinesMerge(const std::vector<const std::__cxx11::basic_string<char>*>&)’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1924:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1924 | std::__move_median_to_first(__first, __first + 1, __mid, __last - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1925 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1924:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::bambam::ReadGroupVectorMerge::ReadGroupVectorMerge(const std::vector<const std::vector<libmaus2::bambam::ReadGroup>*>&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamCatHeader.hpp:22,
from ./libmaus2/bambam/BamCat.hpp:22,
from test/testbamcat.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = std::__cxx11::basic_istringstream<char>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateThreadPoolReader]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘int main(int, char**)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamAlignmentDecoderInfo*, std::vector<libmaus2::bambam::BamAlignmentDecoderInfo> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::bambam::BamMergeTemplate<_heap_comparator_type, _sort_check_type>::BamMergeTemplate(const std::vector<std::__cxx11::basic_string<char> >&, bool) [with _heap_comparator_type = libmaus2::bambam::BamMergeQueyNameHeapComparator; _sort_check_type = libmaus2::bambam::BamCatHeader::IsQueryNameSorted]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamMergeQueryName.hpp:23,
from test/testbammergequeryname.cpp:20:
./libmaus2/bambam/BamMergeTemplate.hpp:163:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
163 | }
| ^
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In function ‘int main(int, char**)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
test/testbammergequeryname.cpp:68:1: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
68 | }
| ^
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamCatHeader.hpp:22,
from ./libmaus2/bambam/BamMergeCoordinate.hpp:22,
from test/testbammergecoordinate.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2193 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::set<long long unsigned int> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::bambam::ChromosomeVectorMerge::ChromosomeVectorMerge(const std::vector<const std::vector<libmaus2::bambam::Chromosome>*>&, bool)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamCatHeader.hpp:26,
from ./libmaus2/bambam/BamMergeCoordinate.hpp:22,
from test/testbammergecoordinate.cpp:20:
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
279 | }
| ^
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::bambam::ProgramHeaderLineSet::ProgramHeaderLineSet(const string&)’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testautoarray2d-testautoarray2d.o `test -f 'test/testautoarray2d.cpp' || echo './'`test/testautoarray2d.cpp
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
79 | __move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b,
| ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1819:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1819 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testhist-testhist.o `test -f 'test/testhist.cpp' || echo './'`test/testhist.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testfastaparse-testfastaparse.o `test -f 'test/testfastaparse.cpp' || echo './'`test/testfastaparse.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testvalidatebamindex-testvalidatebamindex.o `test -f 'test/testvalidatebamindex.cpp' || echo './'`test/testvalidatebamindex.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testeditdistance-testeditdistance.o `test -f 'test/testeditdistance.cpp' || echo './'`test/testeditdistance.cpp
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1662 | __heap_select(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1937:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1937 | std::__heap_select(__first, __middle, __last, __comp);
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘std::vector<std::pair<long long unsigned int, long long unsigned int> > libmaus2::bambam::BamIndex::reg2chunks(uint64_t, uint64_t, uint64_t) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamCatHeader.hpp:22,
from ./libmaus2/bambam/BamMergeCoordinate.hpp:22,
from test/testbammergecoordinate.cpp:20:
./libmaus2/trie/TrieState.hpp:768:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
768 | }
| ^
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::bambam::ProgramHeaderLinesMerge::ProgramHeaderLinesMerge(const std::vector<const std::__cxx11::basic_string<char>*>&)’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testsimplethreadpool-testsimplethreadpool.o `test -f 'test/testsimplethreadpool.cpp' || echo './'`test/testsimplethreadpool.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::BamMergeCoordinateHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::BamMergeCoordinateHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘bool libmaus2::bambam::BamMergeTemplate<_heap_comparator_type, _sort_check_type>::readAlignmentInternal(bool) [with _heap_comparator_type = libmaus2::bambam::BamMergeCoordinateHeapComparator; _sort_check_type = libmaus2::bambam::BamCatHeader::IsCoordinateSorted]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::BamMergeTemplate<_heap_comparator_type, _sort_check_type>::init() [with _heap_comparator_type = libmaus2::bambam::BamMergeCoordinateHeapComparator; _sort_check_type = libmaus2::bambam::BamCatHeader::IsCoordinateSorted]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1924:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1924 | std::__move_median_to_first(__first, __first + 1, __mid, __last - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1925 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1924:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::bambam::ReadGroupVectorMerge::ReadGroupVectorMerge(const std::vector<const std::vector<libmaus2::bambam::ReadGroup>*>&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamCatHeader.hpp:22,
from ./libmaus2/bambam/BamMergeCoordinate.hpp:22,
from test/testbammergecoordinate.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testsimplethreadpoolbamdecode-testsimplethreadpoolbamdecode.o `test -f 'test/testsimplethreadpoolbamdecode.cpp' || echo './'`test/testsimplethreadpoolbamdecode.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = std::__cxx11::basic_istringstream<char>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testvalidatebamindex.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testvalidatebamindex.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateThreadPoolReader]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testgaparraybyte-testgaparraybyte.o `test -f 'test/testgaparraybyte.cpp' || echo './'`test/testgaparraybyte.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testvalidatebamindex.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamIndexGenerator.hpp:31,
from test/testvalidatebamindex.cpp:21:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testvalidatebamindex.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testvalidatebamindex.cpp:20:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testvalidatebamindex.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamIndexGenerator.hpp:31,
from test/testvalidatebamindex.cpp:21:
./libmaus2/trie/TrieState.hpp:768:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
768 | }
| ^
./libmaus2/trie/TrieState.hpp:768:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamIndexGenerator.hpp:31,
from test/testvalidatebamindex.cpp:21:
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In function ‘int main(int, char**)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testvalidatebamindex.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
test/testbammergecoordinate.cpp:68:1: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
68 | }
| ^
test/testsimplethreadpoolbamdecode.cpp: In instantiation of ‘void BamThreadPoolDecodeBamParsePackageDispatcher<_order_type>::dispatch(libmaus2::parallel::SimpleThreadWorkPackage*, libmaus2::parallel::SimpleThreadPoolInterfaceEnqueTermInterface&) [with _order_type = libmaus2::bambam::BamAlignmentNameComparator]’:
test/testsimplethreadpoolbamdecode.cpp:920:15: required from here
test/testsimplethreadpoolbamdecode.cpp:977:40: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
977 | while ( (pc-pa >= 4) && ((pc-pa) >= (4+(lblocksize=decodeLittleEndianInteger<4>(pa)) )) )
| ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
test/testsimplethreadpoolbamdecode.cpp: In instantiation of ‘void BamThreadPoolDecodeBamParsePackageDispatcher<_order_type>::dispatch(libmaus2::parallel::SimpleThreadWorkPackage*, libmaus2::parallel::SimpleThreadPoolInterfaceEnqueTermInterface&) [with _order_type = libmaus2::bambam::BamAlignmentPosComparator]’:
test/testsimplethreadpoolbamdecode.cpp:920:15: required from here
test/testsimplethreadpoolbamdecode.cpp:977:40: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
test/testsimplethreadpoolbamdecode.cpp: In instantiation of ‘void BamThreadPoolMergeProcessPackageDispatcher<_order_type>::dispatch(libmaus2::parallel::SimpleThreadWorkPackage*, libmaus2::parallel::SimpleThreadPoolInterfaceEnqueTermInterface&) [with _order_type = libmaus2::bambam::BamAlignmentNameComparator]’:
test/testsimplethreadpoolbamdecode.cpp:2727:15: required from here
test/testsimplethreadpoolbamdecode.cpp:2786:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2786 | (pe-pc) >= (4+(parserState.blocklen=decodeLEInteger4(pc)))
| ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
test/testsimplethreadpoolbamdecode.cpp:2794:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2794 | (pe-pc) >= (4+(parserState.blocklen=decodeLEInteger4(pc)))
| ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
test/testsimplethreadpoolbamdecode.cpp: In instantiation of ‘void BamThreadPoolMergeProcessPackageDispatcher<_order_type>::dispatch(libmaus2::parallel::SimpleThreadWorkPackage*, libmaus2::parallel::SimpleThreadPoolInterfaceEnqueTermInterface&) [with _order_type = libmaus2::bambam::BamAlignmentPosComparator]’:
test/testsimplethreadpoolbamdecode.cpp:2727:15: required from here
test/testsimplethreadpoolbamdecode.cpp:2786:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2786 | (pe-pc) >= (4+(parserState.blocklen=decodeLEInteger4(pc)))
| ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
test/testsimplethreadpoolbamdecode.cpp:2794:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2794 | (pe-pc) >= (4+(parserState.blocklen=decodeLEInteger4(pc)))
| ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from test/testgaparraybyte.cpp:21:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In function ‘_Z16testGapArrayBytev._omp_fn.0’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/GetFileSize.hpp:24,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/suffixsort/GapArrayByteDecoder.hpp:24,
from ./libmaus2/suffixsort/GapArrayByteDecoderBuffer.hpp:22,
from ./libmaus2/suffixsort/GapArrayByte.hpp:22,
from test/testgaparraybyte.cpp:24:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::sorting::MergingReadBack<long long unsigned int>::HeapOrderAdapter>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from test/testgaparraybyte.cpp:21:
/usr/include/c++/10/bits/vector.tcc: In member function ‘bool libmaus2::sorting::MergingReadBack<_data_type, _order_type>::getNext(libmaus2::sorting::MergingReadBack<_data_type, _order_type>::data_type&) [with _data_type = long long unsigned int; _order_type = std::less<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::sorting::MergingReadBack<_data_type, _order_type>::MergingReadBack(const string&, const std::vector<long long unsigned int>&, uint64_t, uint64_t) [with _data_type = long long unsigned int; _order_type = std::less<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from test/testsimplethreadpoolbamdecode.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<BamThreadPoolMergeWritePendingInfo*, std::vector<BamThreadPoolMergeWritePendingInfo> >; _Distance = int; _Tp = BamThreadPoolMergeWritePendingInfo; _Compare = __gnu_cxx::__ops::_Iter_comp_val<BamThreadPoolMergeWritePendingInfoHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<BamThreadPoolMergeWritePendingInfo*, std::vector<BamThreadPoolMergeWritePendingInfo> >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from test/testsimplethreadpoolbamdecode.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::suffixsort::GapArrayByte::flush()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testzlibconcat-testzlibconcat.o `test -f 'test/testzlibconcat.cpp' || echo './'`test/testzlibconcat.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testsimplecompressblock-testsimplecompressblock.o `test -f 'test/testsimplecompressblock.cpp' || echo './'`test/testsimplecompressblock.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from test/testsimplethreadpoolbamdecode.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/lz/CompressorObject.hpp:22,
from ./libmaus2/lz/ZlibCompressorObject.hpp:22,
from ./libmaus2/lz/ZlibCompressorObjectFactory.hpp:22,
from test/testzlibconcat.cpp:22:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char, std::char_traits<char> > >&}; _Tp = libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >; _Alloc = std::allocator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> > >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >, std::allocator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> > > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/lz/CompressorObject.hpp:22,
from ./libmaus2/lz/ZlibCompressorObject.hpp:22,
from ./libmaus2/lz/ZlibCompressorObjectFactory.hpp:22,
from test/testzlibconcat.cpp:22:
/usr/include/c++/10/bits/stl_vector.h: In function ‘void testConcat(const string&, const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >*, std::vector<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >, std::allocator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> > > > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >*, std::vector<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >, std::allocator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> > > > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >*, std::vector<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >, std::allocator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> > > > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from test/testsimplethreadpoolbamdecode.cpp:19:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/lz/SimpleCompressedInputBlockConcat.hpp:22,
from test/testsimplecompressblock.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::lz::SimpleCompressedStreamNamedInterval}; _Tp = libmaus2::lz::SimpleCompressedStreamNamedInterval; _Alloc = std::allocator<libmaus2::lz::SimpleCompressedStreamNamedInterval>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::lz::SimpleCompressedStreamNamedInterval>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::lz::SimpleCompressedStreamNamedInterval>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In function ‘void testConcatInputBlock()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::SimpleCompressedStreamNamedInterval*, std::vector<libmaus2::lz::SimpleCompressedStreamNamedInterval> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::SimpleCompressedStreamNamedInterval*, std::vector<libmaus2::lz::SimpleCompressedStreamNamedInterval> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::SimpleCompressedStreamNamedInterval*, std::vector<libmaus2::lz::SimpleCompressedStreamNamedInterval> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::SimpleCompressedStreamNamedInterval*, std::vector<libmaus2::lz::SimpleCompressedStreamNamedInterval> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from test/testsimplethreadpoolbamdecode.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testfaindex-testfaindex.o `test -f 'test/testfaindex.cpp' || echo './'`test/testfaindex.cpp
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from test/testsimplethreadpoolbamdecode.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testfastablockrecode-testfastablockrecode.o `test -f 'test/testfastablockrecode.cpp' || echo './'`test/testfastablockrecode.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/fastx/FastAIndex.hpp:22,
from test/testfaindex.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::fastx::FastAIndexEntry}; _Tp = libmaus2::fastx::FastAIndexEntry; _Alloc = std::allocator<libmaus2::fastx::FastAIndexEntry>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::fastx::FastAIndexEntry>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from test/testsimplethreadpoolbamdecode.cpp:19:
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::fastx::FastAIndex::FastAIndex(std::istream&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::fastx::FastAIndexEntry*, std::vector<libmaus2::fastx::FastAIndexEntry> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testrlhist-testrlhist.o `test -f 'test/testrlhist.cpp' || echo './'`test/testrlhist.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testnumcpus-testnumcpus.o `test -f 'test/testnumcpus.cpp' || echo './'`test/testnumcpus.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testdiag-testdiag.o `test -f 'test/testdiag.cpp' || echo './'`test/testdiag.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testlowmembamheaderparser-testlowmembamheaderparser.o `test -f 'test/testlowmembamheaderparser.cpp' || echo './'`test/testlowmembamheaderparser.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/bambam/BamSeqEncodeTable.hpp:22,
from ./libmaus2/fastx/FastABPGenerator.hpp:22,
from test/testfastablockrecode.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/bambam/BamSeqEncodeTable.hpp:22,
from ./libmaus2/fastx/FastABPGenerator.hpp:22,
from test/testfastablockrecode.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In function ‘static uint64_t libmaus2::fastx::FastABPGenerator::fastAToFastaBP(std::istream&, std::ostream&, std::ostream*, uint64_t)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from test/testfastablockrecode.cpp:20:
./libmaus2/fastx/FastABPGenerator.hpp:321:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
321 | }
| ^
./libmaus2/fastx/FastABPGenerator.hpp:321:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/bambam/BamSeqEncodeTable.hpp:22,
from ./libmaus2/fastx/FastABPGenerator.hpp:22,
from test/testfastablockrecode.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In function ‘int main(int, char**)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from test/testsimplethreadpoolbamdecode.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const BamThreadPoolDecodeBamParseQueueInfo&}; _Tp = BamThreadPoolDecodeBamParseQueueInfo; _Alloc = std::allocator<BamThreadPoolDecodeBamParseQueueInfo>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<BamThreadPoolDecodeBamParseQueueInfo, std::allocator<BamThreadPoolDecodeBamParseQueueInfo> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const BamThreadPoolMergeProcessBufferInfo&}; _Tp = BamThreadPoolMergeProcessBufferInfo; _Alloc = std::allocator<BamThreadPoolMergeProcessBufferInfo>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<BamThreadPoolMergeProcessBufferInfo>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, const unsigned char*>}; _Tp = std::pair<long long unsigned int, const unsigned char*>; _Alloc = std::allocator<std::pair<long long unsigned int, const unsigned char*> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, const unsigned char*> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::priority_queue<_Tp, _Sequence, _Compare>::push(std::priority_queue<_Tp, _Sequence, _Compare>::value_type&&) [with _Tp = std::pair<long long unsigned int, const unsigned char*>; _Sequence = std::vector<std::pair<long long unsigned int, const unsigned char*> >; _Compare = BamThreadPoolMergeHeapComparator<libmaus2::bambam::BamAlignmentNameComparator>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, const unsigned char*>*, std::vector<std::pair<long long unsigned int, const unsigned char*> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testgeneflatfile-testgeneflatfile.o `test -f 'test/testgeneflatfile.cpp' || echo './'`test/testgeneflatfile.cpp
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::priority_queue<_Tp, _Sequence, _Compare>::push(std::priority_queue<_Tp, _Sequence, _Compare>::value_type&&) [with _Tp = std::pair<long long unsigned int, const unsigned char*>; _Sequence = std::vector<std::pair<long long unsigned int, const unsigned char*> >; _Compare = BamThreadPoolMergeHeapComparator<libmaus2::bambam::BamAlignmentPosComparator>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, const unsigned char*>*, std::vector<std::pair<long long unsigned int, const unsigned char*> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from test/testsimplethreadpoolbamdecode.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void BamThreadPoolDecodeDecompressPackageDispatcher<_order_type>::dispatch(libmaus2::parallel::SimpleThreadWorkPackage*, libmaus2::parallel::SimpleThreadPoolInterfaceEnqueTermInterface&) [with _order_type = libmaus2::bambam::BamAlignmentNameComparator]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<BamThreadPoolDecodeBamParseQueueInfo*, std::vector<BamThreadPoolDecodeBamParseQueueInfo, std::allocator<BamThreadPoolDecodeBamParseQueueInfo> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void BamThreadPoolDecodeBamParsePackageDispatcher<_order_type>::dispatch(libmaus2::parallel::SimpleThreadWorkPackage*, libmaus2::parallel::SimpleThreadPoolInterfaceEnqueTermInterface&) [with _order_type = libmaus2::bambam::BamAlignmentNameComparator]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<BamThreadPoolDecodeBamParseQueueInfo*, std::vector<BamThreadPoolDecodeBamParseQueueInfo, std::allocator<BamThreadPoolDecodeBamParseQueueInfo> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void BamThreadPoolDecodeDecompressPackageDispatcher<_order_type>::dispatch(libmaus2::parallel::SimpleThreadWorkPackage*, libmaus2::parallel::SimpleThreadPoolInterfaceEnqueTermInterface&) [with _order_type = libmaus2::bambam::BamAlignmentPosComparator]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<BamThreadPoolDecodeBamParseQueueInfo*, std::vector<BamThreadPoolDecodeBamParseQueueInfo, std::allocator<BamThreadPoolDecodeBamParseQueueInfo> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void BamThreadPoolDecodeBamParsePackageDispatcher<_order_type>::dispatch(libmaus2::parallel::SimpleThreadWorkPackage*, libmaus2::parallel::SimpleThreadPoolInterfaceEnqueTermInterface&) [with _order_type = libmaus2::bambam::BamAlignmentPosComparator]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<BamThreadPoolDecodeBamParseQueueInfo*, std::vector<BamThreadPoolDecodeBamParseQueueInfo, std::allocator<BamThreadPoolDecodeBamParseQueueInfo> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testlowmembamheaderparser.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testlowmembamheaderparser.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testurlinputstream-testurlinputstream.o `test -f 'test/testurlinputstream.cpp' || echo './'`test/testurlinputstream.cpp
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void BamThreadPoolMergeProcessPackageDispatcher<_order_type>::dispatch(libmaus2::parallel::SimpleThreadWorkPackage*, libmaus2::parallel::SimpleThreadPoolInterfaceEnqueTermInterface&) [with _order_type = libmaus2::bambam::BamAlignmentNameComparator]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<BamThreadPoolMergeProcessBufferInfo*, std::vector<BamThreadPoolMergeProcessBufferInfo> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testlowmembamheaderparser.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void BamThreadPoolMergeProcessPackageDispatcher<_order_type>::dispatch(libmaus2::parallel::SimpleThreadWorkPackage*, libmaus2::parallel::SimpleThreadPoolInterfaceEnqueTermInterface&) [with _order_type = libmaus2::bambam::BamAlignmentPosComparator]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<BamThreadPoolMergeProcessBufferInfo*, std::vector<BamThreadPoolMergeProcessBufferInfo> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from test/testsimplethreadpoolbamdecode.cpp:19:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, const unsigned char*>*, std::vector<std::pair<long long unsigned int, const unsigned char*> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testsimpletrie-testsimpletrie.o `test -f 'test/testsimpletrie.cpp' || echo './'`test/testsimpletrie.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testlru-testlru.o `test -f 'test/testlru.cpp' || echo './'`test/testlru.cpp
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from test/testlowmembamheaderparser.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy*, std::vector<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy*, std::vector<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy*, std::vector<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy> >’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::sorting::ParallelStableSort::MergeLevel<_iterator, _order_type>::dispatch() [with _iterator = long long unsigned int*; _order_type = libmaus2::bambam::BamAlignmentNameComparator]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::sorting::ParallelStableSort::MergeLevel<_iterator, _order_type>::dispatch() [with _iterator = long long unsigned int*; _order_type = libmaus2::bambam::BamAlignmentPosComparator]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testlowmembamheaderparser.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testlowmembamheaderparser.cpp:19:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testlowmembamheaderparser.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testlowmembamheaderparser.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::BamHeaderLowMem::setupFromText()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testlowmembamheaderparser.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from test/testlowmembamheaderparser.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp:71:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy*, std::vector<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy> >’ changed in GCC 7.1
71 | unique_ptr_type u(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testbytecnt-testbytecnt.o `test -f 'test/testbytecnt.cpp' || echo './'`test/testbytecnt.cpp
/usr/include/c++/10/bits/vector.tcc: In member function ‘void BamThreadPoolMergeMergePackageDispatcher<_order_type>::dispatch(libmaus2::parallel::SimpleThreadWorkPackage*, libmaus2::parallel::SimpleThreadPoolInterfaceEnqueTermInterface&) [with _order_type = libmaus2::bambam::BamAlignmentPosComparator]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, const unsigned char*>*, std::vector<std::pair<long long unsigned int, const unsigned char*> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, const unsigned char*>*, std::vector<std::pair<long long unsigned int, const unsigned char*> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamAlignmentDecoder.hpp:24,
from test/testlowmembamheaderparser.cpp:20:
./libmaus2/bambam/BamHeaderLowMem.hpp:804:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
804 | }
| ^
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/teststronglyconnectedcomponents-teststronglyconnectedcomponents.o `test -f 'test/teststronglyconnectedcomponents.cpp' || echo './'`test/teststronglyconnectedcomponents.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testtopologicalsorting-testtopologicalsorting.o `test -f 'test/testtopologicalsorting.cpp' || echo './'`test/testtopologicalsorting.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/graph/StronglyConnectedComponents.hpp:26,
from test/teststronglyconnectedcomponents.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/graph/StronglyConnectedComponents.hpp:26,
from test/teststronglyconnectedcomponents.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/graph/StronglyConnectedComponents.hpp:23,
from test/teststronglyconnectedcomponents.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::vector<long long unsigned int> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<long long unsigned int&&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::vector<long long unsigned int> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/graph/StronglyConnectedComponents.hpp:22,
from test/teststronglyconnectedcomponents.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/unordered_map:46,
from /usr/include/c++/10/functional:61,
from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
from /usr/include/c++/10/algorithm:74,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/aio/PosixFdInputOutputStreamBuffer.hpp:26,
from ./libmaus2/aio/PosixFdInputOutputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputOutputStreamFactory.hpp:23,
from ./libmaus2/aio/InputOutputStreamFactoryContainer.hpp:23,
from ./libmaus2/lru/SparseLRUFileBunch.hpp:22,
from test/testlru.cpp:19:
/usr/include/c++/10/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = long long unsigned int; _Value = std::pair<const long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, long long unsigned int> >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to<long long unsigned int>; _H1 = std::hash<long long unsigned int>; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits<false, false, true>]’:
/usr/include/c++/10/bits/hashtable.h:1851:5: note: parameter passing for argument of type ‘std::_Hashtable<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> >, std::__detail::_Select1st, std::equal_to<long long unsigned int>, std::hash<long long unsigned int>, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits<false, false, true> >::const_iterator’ {aka ‘std::__detail::_Hashtable_base<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::__detail::_Select1st, std::equal_to<long long unsigned int>, std::hash<long long unsigned int>, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Hashtable_traits<false, false, true> >::const_iterator’} changed in GCC 7.1
1851 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1852 | _H1, _H2, _Hash, _RehashPolicy, _Traits>::
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/hashtable.h: In member function ‘void libmaus2::lru::SparseLRUFileBunch::remove(uint64_t)’:
/usr/include/c++/10/bits/hashtable.h:807:21: note: parameter passing for argument of type ‘std::_Hashtable<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> >, std::__detail::_Select1st, std::equal_to<long long unsigned int>, std::hash<long long unsigned int>, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits<false, false, true> >::const_iterator’ {aka ‘std::__detail::_Hashtable_base<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::__detail::_Select1st, std::equal_to<long long unsigned int>, std::hash<long long unsigned int>, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Hashtable_traits<false, false, true> >::const_iterator’} changed in GCC 7.1
807 | { return erase(const_iterator(__it)); }
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/graph/StronglyConnectedComponents.hpp:23,
from test/teststronglyconnectedcomponents.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In function ‘void testStronglyConnectedComponents()’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/graph/StronglyConnectedComponents.hpp:26,
from test/teststronglyconnectedcomponents.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/graph/StronglyConnectedComponents.hpp:23,
from test/teststronglyconnectedcomponents.cpp:19:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/graph/StronglyConnectedComponents.hpp:22,
from test/teststronglyconnectedcomponents.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/graph/StronglyConnectedComponents.hpp:23,
from test/teststronglyconnectedcomponents.cpp:19:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/graph/StronglyConnectedComponents.hpp:22,
from test/teststronglyconnectedcomponents.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/graph/StronglyConnectedComponents.hpp:26,
from test/teststronglyconnectedcomponents.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/graph/StronglyConnectedComponents.hpp:22,
from test/teststronglyconnectedcomponents.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/aio/PosixFdInputOutputStreamBuffer.hpp:26,
from ./libmaus2/aio/PosixFdInputOutputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputOutputStreamFactory.hpp:23,
from ./libmaus2/aio/InputOutputStreamFactoryContainer.hpp:23,
from ./libmaus2/lru/SparseLRUFileBunch.hpp:22,
from test/testlru.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/aio/PosixFdInputOutputStreamBuffer.hpp:26,
from ./libmaus2/aio/PosixFdInputOutputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputOutputStreamFactory.hpp:23,
from ./libmaus2/aio/InputOutputStreamFactoryContainer.hpp:23,
from ./libmaus2/lru/SparseLRUFileBunch.hpp:22,
from test/testlru.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In member function ‘int64_t libmaus2::lru::SparseLRU::get(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/unordered_map:46,
from /usr/include/c++/10/functional:61,
from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
from /usr/include/c++/10/algorithm:74,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/aio/PosixFdInputOutputStreamBuffer.hpp:26,
from ./libmaus2/aio/PosixFdInputOutputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputOutputStreamFactory.hpp:23,
from ./libmaus2/aio/InputOutputStreamFactoryContainer.hpp:23,
from ./libmaus2/lru/SparseLRUFileBunch.hpp:22,
from test/testlru.cpp:19:
/usr/include/c++/10/bits/hashtable.h:807:21: note: parameter passing for argument of type ‘std::_Hashtable<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> >, std::__detail::_Select1st, std::equal_to<long long unsigned int>, std::hash<long long unsigned int>, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits<false, false, true> >::const_iterator’ {aka ‘std::__detail::_Hashtable_base<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::__detail::_Select1st, std::equal_to<long long unsigned int>, std::hash<long long unsigned int>, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Hashtable_traits<false, false, true> >::const_iterator’} changed in GCC 7.1
807 | { return erase(const_iterator(__it)); }
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/aio/PosixFdInputOutputStreamBuffer.hpp:26,
from ./libmaus2/aio/PosixFdInputOutputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputOutputStreamFactory.hpp:23,
from ./libmaus2/aio/InputOutputStreamFactoryContainer.hpp:23,
from ./libmaus2/lru/SparseLRUFileBunch.hpp:22,
from test/testlru.cpp:19:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/unordered_map:46,
from /usr/include/c++/10/functional:61,
from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
from /usr/include/c++/10/algorithm:74,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/aio/PosixFdInputOutputStreamBuffer.hpp:26,
from ./libmaus2/aio/PosixFdInputOutputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputOutputStreamFactory.hpp:23,
from ./libmaus2/aio/InputOutputStreamFactoryContainer.hpp:23,
from ./libmaus2/lru/SparseLRUFileBunch.hpp:22,
from test/testlru.cpp:19:
/usr/include/c++/10/bits/hashtable.h:807:21: note: parameter passing for argument of type ‘std::_Hashtable<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> >, std::__detail::_Select1st, std::equal_to<long long unsigned int>, std::hash<long long unsigned int>, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits<false, false, true> >::const_iterator’ {aka ‘std::__detail::_Hashtable_base<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::__detail::_Select1st, std::equal_to<long long unsigned int>, std::hash<long long unsigned int>, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Hashtable_traits<false, false, true> >::const_iterator’} changed in GCC 7.1
807 | { return erase(const_iterator(__it)); }
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/aio/PosixFdInputOutputStreamBuffer.hpp:26,
from ./libmaus2/aio/PosixFdInputOutputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputOutputStreamFactory.hpp:23,
from ./libmaus2/aio/InputOutputStreamFactoryContainer.hpp:23,
from ./libmaus2/lru/SparseLRUFileBunch.hpp:22,
from test/testlru.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputOutputStream> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputOutputStream> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputOutputStream> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputOutputStream> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputOutputStream> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputOutputStream> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/set:60,
from ./libmaus2/graph/ReachableVertices.hpp:22,
from ./libmaus2/graph/TopologicalSorting.hpp:22,
from test/testtopologicalsorting.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::set<long long unsigned int> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/graph/ReachableVertices.hpp:24,
from ./libmaus2/graph/TopologicalSorting.hpp:22,
from test/testtopologicalsorting.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/graph/ReachableVertices.hpp:23,
from ./libmaus2/graph/TopologicalSorting.hpp:22,
from test/testtopologicalsorting.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In function ‘static std::pair<bool, std::map<long long unsigned int, long long unsigned int> > libmaus2::graph::TopologicalSorting::topologicalSorting(const std::map<long long unsigned int, std::vector<edge_type> >&, uint64_t, projector_type) [with edge_type = long long unsigned int; projector_type = libmaus2::graph::IdentityTargetProjector]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/graph/ReachableVertices.hpp:24,
from ./libmaus2/graph/TopologicalSorting.hpp:22,
from test/testtopologicalsorting.cpp:20:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/graph/ReachableVertices.hpp:23,
from ./libmaus2/graph/TopologicalSorting.hpp:22,
from test/testtopologicalsorting.cpp:20:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/graph/ReachableVertices.hpp:24,
from ./libmaus2/graph/TopologicalSorting.hpp:22,
from test/testtopologicalsorting.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘void testTopologicalSortingAcyclic()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testlinebuffer-testlinebuffer.o `test -f 'test/testlinebuffer.cpp' || echo './'`test/testlinebuffer.cpp
/usr/include/c++/10/bits/vector.tcc: In function ‘void testTopologicalSortingCyclic()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testsamdecoder-testsamdecoder.o `test -f 'test/testsamdecoder.cpp' || echo './'`test/testsamdecoder.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testdecimalnumberparser-testdecimalnumberparser.o `test -f 'test/testdecimalnumberparser.cpp' || echo './'`test/testdecimalnumberparser.cpp
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/aio/PosixFdInputOutputStreamBuffer.hpp:26,
from ./libmaus2/aio/PosixFdInputOutputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputOutputStreamFactory.hpp:23,
from ./libmaus2/aio/InputOutputStreamFactoryContainer.hpp:23,
from ./libmaus2/lru/SparseLRUFileBunch.hpp:22,
from test/testlru.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In member function ‘libmaus2::aio::InputOutputStream& libmaus2::lru::SparseLRUFileBunch::operator[](uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputOutputStream> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputOutputStream> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputOutputStream> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputOutputStream> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputOutputStream> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputOutputStream> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testunsignedinteger-testunsignedinteger.o `test -f 'test/testunsignedinteger.cpp' || echo './'`test/testunsignedinteger.cpp
/usr/include/c++/10/bits/stl_map.h: In function ‘int main()’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/unordered_map:46,
from /usr/include/c++/10/functional:61,
from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
from /usr/include/c++/10/algorithm:74,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/aio/PosixFdInputOutputStreamBuffer.hpp:26,
from ./libmaus2/aio/PosixFdInputOutputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputOutputStreamFactory.hpp:23,
from ./libmaus2/aio/InputOutputStreamFactoryContainer.hpp:23,
from ./libmaus2/lru/SparseLRUFileBunch.hpp:22,
from test/testlru.cpp:19:
/usr/include/c++/10/bits/hashtable.h:807:21: note: parameter passing for argument of type ‘std::_Hashtable<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> >, std::__detail::_Select1st, std::equal_to<long long unsigned int>, std::hash<long long unsigned int>, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits<false, false, true> >::const_iterator’ {aka ‘std::__detail::_Hashtable_base<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::__detail::_Select1st, std::equal_to<long long unsigned int>, std::hash<long long unsigned int>, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Hashtable_traits<false, false, true> >::const_iterator’} changed in GCC 7.1
807 | { return erase(const_iterator(__it)); }
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/aio/PosixFdInputOutputStreamBuffer.hpp:26,
from ./libmaus2/aio/PosixFdInputOutputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputOutputStreamFactory.hpp:23,
from ./libmaus2/aio/InputOutputStreamFactoryContainer.hpp:23,
from ./libmaus2/lru/SparseLRUFileBunch.hpp:22,
from test/testlru.cpp:19:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/unordered_map:46,
from /usr/include/c++/10/functional:61,
from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
from /usr/include/c++/10/algorithm:74,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/aio/PosixFdInputOutputStreamBuffer.hpp:26,
from ./libmaus2/aio/PosixFdInputOutputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputOutputStreamFactory.hpp:23,
from ./libmaus2/aio/InputOutputStreamFactoryContainer.hpp:23,
from ./libmaus2/lru/SparseLRUFileBunch.hpp:22,
from test/testlru.cpp:19:
/usr/include/c++/10/bits/hashtable.h:807:21: note: parameter passing for argument of type ‘std::_Hashtable<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> >, std::__detail::_Select1st, std::equal_to<long long unsigned int>, std::hash<long long unsigned int>, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits<false, false, true> >::const_iterator’ {aka ‘std::__detail::_Hashtable_base<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::__detail::_Select1st, std::equal_to<long long unsigned int>, std::hash<long long unsigned int>, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Hashtable_traits<false, false, true> >::const_iterator’} changed in GCC 7.1
807 | { return erase(const_iterator(__it)); }
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/math/DecimalNumberParser.hpp:22,
from test/testdecimalnumberparser.cpp:21:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testmd5-testmd5.o `test -f 'test/testmd5.cpp' || echo './'`test/testmd5.cpp
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long int}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testsha-testsha.o `test -f 'test/testsha.cpp' || echo './'`test/testsha.cpp
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::math::DecimalNumberParser::DecimalNumberParser()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/math/DecimalNumberParser.hpp:22,
from test/testdecimalnumberparser.cpp:21:
/usr/include/c++/10/bits/stl_vector.h: In function ‘int main()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testparallelbamvalidation-testparallelbamvalidation.o `test -f 'test/testparallelbamvalidation.cpp' || echo './'`test/testparallelbamvalidation.cpp
In file included from ./libmaus2/digest/md5.hpp:25,
from ./libmaus2/digest/Digests.hpp:22,
from ./libmaus2/digest/DigestFactoryInterface.hpp:22,
from ./libmaus2/digest/DigestFactory.hpp:22,
from test/testsha.cpp:19:
./libmaus2/math/UnsignedInteger.hpp: In instantiation of ‘std::ostream& libmaus2::math::operator<<(std::ostream&, const libmaus2::math::UnsignedInteger<k>&) [with unsigned int k = 0; std::ostream = std::basic_ostream<char>]’:
test/testsha.cpp:43:75: required from ‘void printCRC(const uint8_t*, uint64_t, std::ostream&) [with crc = libmaus2::digest::Null; uint8_t = unsigned char; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
test/testsha.cpp:310:59: required from here
./libmaus2/math/UnsignedInteger.hpp:688:33: warning: comparison of unsigned expression in ‘< 0’ is always false [-Wtype-limits]
688 | for ( unsigned int i = 0; i < k; ++i )
| ~~^~~
./libmaus2/math/UnsignedInteger.hpp: In instantiation of ‘libmaus2::math::UnsignedInteger<k>::UnsignedInteger(const libmaus2::math::UnsignedInteger<k>&) [with unsigned int k = 0]’:
./libmaus2/math/UnsignedInteger.hpp:697:24: required from ‘std::ostream& libmaus2::math::operator<<(std::ostream&, const libmaus2::math::UnsignedInteger<k>&) [with unsigned int k = 0; std::ostream = std::basic_ostream<char>]’
test/testsha.cpp:43:75: required from ‘void printCRC(const uint8_t*, uint64_t, std::ostream&) [with crc = libmaus2::digest::Null; uint8_t = unsigned char; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
test/testsha.cpp:310:59: required from here
./libmaus2/math/UnsignedInteger.hpp:162:27: warning: comparison of unsigned expression in ‘< 0’ is always false [-Wtype-limits]
162 | for ( size_t i = 0; i < k; ++i )
| ~~^~~
./libmaus2/math/UnsignedInteger.hpp: In instantiation of ‘libmaus2::math::UnsignedInteger<k>::UnsignedInteger(uint64_t) [with unsigned int k = 0; uint64_t = long long unsigned int]’:
./libmaus2/math/UnsignedInteger.hpp:698:24: required from ‘std::ostream& libmaus2::math::operator<<(std::ostream&, const libmaus2::math::UnsignedInteger<k>&) [with unsigned int k = 0; std::ostream = std::basic_ostream<char>]’
test/testsha.cpp:43:75: required from ‘void printCRC(const uint8_t*, uint64_t, std::ostream&) [with crc = libmaus2::digest::Null; uint8_t = unsigned char; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
test/testsha.cpp:310:59: required from here
./libmaus2/math/UnsignedInteger.hpp:172:28: warning: comparison of unsigned expression in ‘< 0’ is always false [-Wtype-limits]
172 | for ( size_t i = 2; i < k; ++i )
| ~~^~~
./libmaus2/math/UnsignedInteger.hpp: In instantiation of ‘bool libmaus2::math::UnsignedInteger<k>::operator==(const libmaus2::math::UnsignedInteger<k>&) const [with unsigned int k = 0]’:
./libmaus2/math/UnsignedInteger.hpp:203:14: required from ‘bool libmaus2::math::UnsignedInteger<k>::operator!=(const libmaus2::math::UnsignedInteger<k>&) const [with unsigned int k = 0]’
./libmaus2/math/UnsignedInteger.hpp:701:15: required from ‘std::ostream& libmaus2::math::operator<<(std::ostream&, const libmaus2::math::UnsignedInteger<k>&) [with unsigned int k = 0; std::ostream = std::basic_ostream<char>]’
test/testsha.cpp:43:75: required from ‘void printCRC(const uint8_t*, uint64_t, std::ostream&) [with crc = libmaus2::digest::Null; uint8_t = unsigned char; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
test/testsha.cpp:310:59: required from here
./libmaus2/math/UnsignedInteger.hpp:196:27: warning: comparison of unsigned expression in ‘< 0’ is always false [-Wtype-limits]
196 | for ( size_t i = 0; i < k; ++i )
| ~~^~~
./libmaus2/math/UnsignedInteger.hpp: In instantiation of ‘bool libmaus2::math::UnsignedInteger<k>::operator>(const libmaus2::math::UnsignedInteger<k>&) const [with unsigned int k = 0]’:
./libmaus2/math/UnsignedInteger.hpp:589:12: required from ‘std::pair<libmaus2::math::UnsignedInteger<k>, libmaus2::math::UnsignedInteger<k> > libmaus2::math::divmod(const libmaus2::math::UnsignedInteger<k>&, const libmaus2::math::UnsignedInteger<k>&) [with unsigned int k = 0]’
./libmaus2/math/UnsignedInteger.hpp:703:67: required from ‘std::ostream& libmaus2::math::operator<<(std::ostream&, const libmaus2::math::UnsignedInteger<k>&) [with unsigned int k = 0; std::ostream = std::basic_ostream<char>]’
test/testsha.cpp:43:75: required from ‘void printCRC(const uint8_t*, uint64_t, std::ostream&) [with crc = libmaus2::digest::Null; uint8_t = unsigned char; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
test/testsha.cpp:310:59: required from here
./libmaus2/math/UnsignedInteger.hpp:222:27: warning: comparison of unsigned expression in ‘< 0’ is always false [-Wtype-limits]
222 | for ( size_t i = 0; i < k; ++i )
| ~~^~~
./libmaus2/math/UnsignedInteger.hpp: In instantiation of ‘libmaus2::math::UnsignedInteger<k>::UnsignedInteger(const libmaus2::math::UnsignedInteger<l>&) [with unsigned int l = 1; unsigned int k = 0]’:
./libmaus2/math/UnsignedInteger.hpp:625:5: required from ‘std::pair<libmaus2::math::UnsignedInteger<k>, libmaus2::math::UnsignedInteger<k> > libmaus2::math::divmod(const libmaus2::math::UnsignedInteger<k>&, const libmaus2::math::UnsignedInteger<k>&) [with unsigned int k = 0]’
./libmaus2/math/UnsignedInteger.hpp:703:67: required from ‘std::ostream& libmaus2::math::operator<<(std::ostream&, const libmaus2::math::UnsignedInteger<k>&) [with unsigned int k = 0; std::ostream = std::basic_ostream<char>]’
test/testsha.cpp:43:75: required from ‘void printCRC(const uint8_t*, uint64_t, std::ostream&) [with crc = libmaus2::digest::Null; uint8_t = unsigned char; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
test/testsha.cpp:310:59: required from here
./libmaus2/math/UnsignedInteger.hpp:156:27: warning: comparison of unsigned expression in ‘< 0’ is always false [-Wtype-limits]
156 | for ( size_t i = l; i < k; ++i )
| ~~^~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testparallelbamrewrite-testparallelbamrewrite.o `test -f 'test/testparallelbamrewrite.cpp' || echo './'`test/testparallelbamrewrite.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testbammateerase-testbammateerase.o `test -f 'test/testbammateerase.cpp' || echo './'`test/testbammateerase.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testsamdecoder.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testsamdecoder.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testsamdecoder.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >; _Distance = int; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::lz::BgzfThreadQueueElementHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testsamdecoder.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::lz::BgzfThreadQueueElement&}; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Alloc = std::allocator<libmaus2::lz::BgzfThreadQueueElement>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> >::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testsamdecoder.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::lz::BgzfDeflateParallel::drain()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::lz::BgzfDeflateParallel::flushInternal()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::BamWriterTemplate<_base_type>::writeBamBlock(const uint8_t*, uint64_t) [with _base_type = libmaus2::bambam::BamWriterParallelStreamBase]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testsamdecoder.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >; _Distance = int; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::lz::BgzfDeflateBlockIdComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from ./libmaus2/bambam/BamBlockWriterBaseFactory.hpp:22,
from test/testsamdecoder.cpp:21:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbammateerase.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbammateerase.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/BgzfInflateHeaderBase.hpp:25,
from ./libmaus2/bambam/parallel/InputBlock.hpp:22,
from ./libmaus2/bambam/parallel/ControlInputInfo.hpp:22,
from test/testparallelbamvalidation.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/BgzfInflateHeaderBase.hpp:25,
from ./libmaus2/bambam/parallel/InputBlock.hpp:22,
from ./libmaus2/bambam/parallel/ControlInputInfo.hpp:22,
from test/testparallelbamvalidation.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testsamdecoder.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testsamdecoder.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >; _Distance = int; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::lz::BgzfDeflateBlockIdComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbammateerase.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testsamdecoder.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::lz::BgzfDeflateParallelThreadCallable::run()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testsamdecoder.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbammateerase.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/BgzfInflateHeaderBase.hpp:25,
from ./libmaus2/bambam/parallel/InputBlock.hpp:22,
from ./libmaus2/bambam/parallel/ControlInputInfo.hpp:22,
from test/testparallelbamvalidation.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::DecompressedPendingObject*, std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> > >; _Distance = int; _Tp = libmaus2::bambam::parallel::DecompressedPendingObject; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::parallel::DecompressedPendingObjectHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::DecompressedPendingObject*, std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbammateerase.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testsamdecoder.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::bambam::BamWriterTemplate<_base_type>::BamWriterTemplate(libmaus2::bambam::BamWriterTemplate<_base_type>::base_type&, const libmaus2::bambam::BamHeader&, const std::vector<libmaus2::lz::BgzfDeflateOutputCallback*>*) [with _base_type = libmaus2::bambam::BamWriterParallelStreamBase]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/lz/BgzfInflateHeaderBase.hpp:25,
from ./libmaus2/bambam/parallel/InputBlock.hpp:22,
from ./libmaus2/bambam/parallel/ControlInputInfo.hpp:22,
from test/testparallelbamvalidation.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbammateerase.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::DecompressedPendingObject*, std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> > >; _Distance = int; _Tp = libmaus2::bambam::parallel::DecompressedPendingObject; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::parallel::DecompressedPendingObjectHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::DecompressedPendingObject*, std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::WritePendingObject*, std::vector<libmaus2::bambam::parallel::WritePendingObject> >; _Distance = int; _Tp = libmaus2::bambam::parallel::WritePendingObject; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::parallel::WritePendingObjectHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::WritePendingObject*, std::vector<libmaus2::bambam::parallel::WritePendingObject> >’ changed in GCC 7.1
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from ./libmaus2/bambam/BamBlockWriterBaseFactory.hpp:22,
from test/testsamdecoder.cpp:21:
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbammateerase.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testsamdecoder.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = std::__cxx11::basic_istringstream<char>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbammateerase.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from ./libmaus2/bambam/BamHeaderLowMem.hpp:26,
from ./libmaus2/bambam/parallel/ParseInfo.hpp:22,
from test/testparallelbamvalidation.cpp:40:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy*, std::vector<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy*, std::vector<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy*, std::vector<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/lz/BgzfInflateHeaderBase.hpp:25,
from ./libmaus2/bambam/parallel/InputBlock.hpp:22,
from ./libmaus2/bambam/parallel/ControlInputInfo.hpp:22,
from test/testparallelbamvalidation.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, bool>; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, bool> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, bool> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, bool>, std::_Select1st<std::pair<const long long unsigned int, bool> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, bool> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/lz/BgzfInflateHeaderBase.hpp:25,
from ./libmaus2/bambam/parallel/InputBlock.hpp:22,
from ./libmaus2/bambam/parallel/ControlInputInfo.hpp:22,
from test/testparallelbamvalidation.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::parallel::DecompressedPendingObject&}; _Tp = libmaus2::bambam::parallel::DecompressedPendingObject; _Alloc = std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> >::iterator’ changed in GCC 7.1
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy*, std::vector<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy*, std::vector<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy*, std::vector<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy> >’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testparallelbamblocksort-testparallelbamblocksort.o `test -f 'test/testparallelbamblocksort.cpp' || echo './'`test/testparallelbamblocksort.cpp
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/lz/BgzfInflateHeaderBase.hpp:25,
from ./libmaus2/bambam/parallel/InputBlock.hpp:22,
from ./libmaus2/bambam/parallel/ControlInputInfo.hpp:22,
from test/testparallelbamvalidation.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual void libmaus2::bambam::parallel::ValidationControl::validateBlockFragmentFinished(libmaus2::bambam::parallel::ValidationFragment&, bool)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, bool>, std::_Select1st<std::pair<const long long unsigned int, bool> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, bool> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, bool>, std::_Select1st<std::pair<const long long unsigned int, bool> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, bool> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/lz/BgzfInflateHeaderBase.hpp:25,
from ./libmaus2/bambam/parallel/InputBlock.hpp:22,
from ./libmaus2/bambam/parallel/ControlInputInfo.hpp:22,
from test/testparallelbamvalidation.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::bambam::parallel::ValidationControl::putDecompressedBlockAddPending(libmaus2::bambam::parallel::DecompressedBlock::shared_ptr_type)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::DecompressedPendingObject*, std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::parallel::SmallLinearBlockCompressionPendingObject}; _Tp = libmaus2::bambam::parallel::SmallLinearBlockCompressionPendingObject; _Alloc = std::allocator<libmaus2::bambam::parallel::SmallLinearBlockCompressionPendingObject>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::parallel::SmallLinearBlockCompressionPendingObject>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::bambam::parallel::ValidationControl::_ZThn16_N8libmaus26bambam8parallel17ValidationControl30putDecompressedBlockAddPendingESt10shared_ptrINS1_17DecompressedBlockEE(libmaus2::bambam::parallel::DecompressedBlock::shared_ptr_type)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::DecompressedPendingObject*, std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘virtual void libmaus2::bambam::parallel::RewriteControl::bamHeaderComplete(const libmaus2::bambam::BamHeaderParserState&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::SmallLinearBlockCompressionPendingObject*, std::vector<libmaus2::bambam::parallel::SmallLinearBlockCompressionPendingObject> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/lz/BgzfInflateHeaderBase.hpp:25,
from ./libmaus2/bambam/parallel/InputBlock.hpp:22,
from ./libmaus2/bambam/parallel/ControlInputInfo.hpp:22,
from test/testparallelbamvalidation.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual void libmaus2::bambam::parallel::ValidationControl::putParsedBlockAddPending(libmaus2::bambam::parallel::AlignmentBuffer::shared_ptr_type)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, bool>, std::_Select1st<std::pair<const long long unsigned int, bool> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, bool> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, bool>; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, bool> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, bool> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, bool>, std::_Select1st<std::pair<const long long unsigned int, bool> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, bool> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::parallel::DecompressedPendingObject&}; _Tp = libmaus2::bambam::parallel::DecompressedPendingObject; _Alloc = std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::parallel::WritePendingObject}; _Tp = libmaus2::bambam::parallel::WritePendingObject; _Alloc = std::allocator<libmaus2::bambam::parallel::WritePendingObject>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::parallel::WritePendingObject>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/lz/BgzfInflateHeaderBase.hpp:25,
from ./libmaus2/bambam/parallel/InputBlock.hpp:22,
from ./libmaus2/bambam/parallel/ControlInputInfo.hpp:22,
from test/testparallelbamvalidation.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/lz/BgzfInflateHeaderBase.hpp:25,
from ./libmaus2/bambam/parallel/InputBlock.hpp:22,
from ./libmaus2/bambam/parallel/ControlInputInfo.hpp:22,
from test/testparallelbamvalidation.cpp:20:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/BgzfInflateHeaderBase.hpp:25,
from ./libmaus2/bambam/parallel/InputBlock.hpp:22,
from ./libmaus2/bambam/parallel/ControlInputInfo.hpp:22,
from test/testparallelbamvalidation.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testmapperm-testmapperm.o `test -f 'test/testmapperm.cpp' || echo './'`test/testmapperm.cpp
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/lz/BgzfInflateHeaderBase.hpp:25,
from ./libmaus2/bambam/parallel/InputBlock.hpp:22,
from ./libmaus2/bambam/parallel/ControlInputInfo.hpp:22,
from test/testparallelbamvalidation.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::BamHeaderLowMem::setupFromText()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/BgzfInflateHeaderBase.hpp:25,
from ./libmaus2/bambam/parallel/InputBlock.hpp:22,
from ./libmaus2/bambam/parallel/ControlInputInfo.hpp:22,
from test/testparallelbamvalidation.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeaderLowMem.hpp:26,
from ./libmaus2/bambam/parallel/ParseInfo.hpp:22,
from test/testparallelbamvalidation.cpp:40:
./libmaus2/hashing/ConstantStringHash.hpp:71:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy*, std::vector<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy> >’ changed in GCC 7.1
71 | unique_ptr_type u(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::bambam::parallel::RewriteControl::putDecompressedBlockAddPending(libmaus2::bambam::parallel::DecompressedBlock::shared_ptr_type)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::DecompressedPendingObject*, std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/bambam/parallel/ParseInfo.hpp:22,
from test/testparallelbamvalidation.cpp:40:
./libmaus2/bambam/BamHeaderLowMem.hpp:804:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
804 | }
| ^
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual void libmaus2::bambam::parallel::RewriteControl::putParsedBlockAddPending(libmaus2::bambam::parallel::AlignmentBuffer::shared_ptr_type)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, bool>, std::_Select1st<std::pair<const long long unsigned int, bool> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, bool> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘virtual void libmaus2::bambam::parallel::RewriteControl::addWritePendingBgzfBlock(int64_t, int64_t, libmaus2::lz::BgzfDeflateOutputBufferBase::shared_ptr_type, const libmaus2::lz::BgzfDeflateZStreamBaseFlushInfo&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::WritePendingObject*, std::vector<libmaus2::bambam::parallel::WritePendingObject> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘virtual void libmaus2::bambam::parallel::RewriteControl::_ZThn72_N8libmaus26bambam8parallel14RewriteControl24addWritePendingBgzfBlockExxSt10shared_ptrINS_2lz27BgzfDeflateOutputBufferBaseEERKNS4_31BgzfDeflateZStreamBaseFlushInfoE(int64_t, int64_t, libmaus2::lz::BgzfDeflateOutputBufferBase::shared_ptr_type, const libmaus2::lz::BgzfDeflateZStreamBaseFlushInfo&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::WritePendingObject*, std::vector<libmaus2::bambam::parallel::WritePendingObject> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::bambam::parallel::RewriteControl::checkLargeBlockCompressionPending()’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::SmallLinearBlockCompressionPendingObject*, std::vector<libmaus2::bambam::parallel::SmallLinearBlockCompressionPendingObject> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::bambam::parallel::RewriteControl::checkValidatedRewritePending()’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from test/testparallelbamblocksort.cpp:19:
./libmaus2/bambam/parallel/BlockMergeControl.hpp: In member function ‘void libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::samCheckWritePendingQueue()’:
./libmaus2/bambam/parallel/BlockMergeControl.hpp:1197:46: warning: left shift count >= width of type [-Wshift-count-overflow]
1197 | package->subid = ((block->blockid + 1) << 32) | block->subblockid;
| ~~~~~~~~~~~~~~~~~~~~~^~~~~
./libmaus2/bambam/parallel/BlockMergeControl.hpp:1202:47: warning: left shift count >= width of type [-Wshift-count-overflow]
1202 | cpackage->subid = ((block->blockid + 1) << 32) | block->subblockid;
| ~~~~~~~~~~~~~~~~~~~~~^~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual void libmaus2::bambam::parallel::RewriteControl::validateBlockFragmentFinished(libmaus2::bambam::parallel::ValidationFragment&, bool)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, bool>, std::_Select1st<std::pair<const long long unsigned int, bool> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, bool> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, bool>, std::_Select1st<std::pair<const long long unsigned int, bool> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, bool> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
./libmaus2/trie/TrieState.hpp:768:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
768 | }
| ^
./libmaus2/trie/TrieState.hpp:768:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testexternalmemoryindex-testexternalmemoryindex.o `test -f 'test/testexternalmemoryindex.cpp' || echo './'`test/testexternalmemoryindex.cpp
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::BamHeaderLowMem::setupFromText()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp:71:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy*, std::vector<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy> >’ changed in GCC 7.1
71 | unique_ptr_type u(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/parallel/ParseInfo.hpp:22,
from test/testparallelbamrewrite.cpp:54:
./libmaus2/bambam/BamHeaderLowMem.hpp:804:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
804 | }
| ^
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testmapperm.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
./libmaus2/bambam/parallel/BlockMergeControl.hpp: In instantiation of ‘void libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::samCheckWritePendingQueue() [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryQueryName]’:
./libmaus2/bambam/parallel/BlockMergeControl.hpp:1268:6: required from ‘void libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::sam_data_write_function(libmaus2::ssize_t, size_t, const char*, size_t, cram_data_write_block_type) [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryQueryName; libmaus2::ssize_t = int; size_t = unsigned int; cram_data_write_block_type = _cram_data_write_block_type]’
./libmaus2/bambam/parallel/BlockMergeControl.hpp:1324:32: required from ‘static void libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::sam_data_write_function(void*, libmaus2::ssize_t, size_t, const char*, size_t, cram_data_write_block_type) [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryQueryName; libmaus2::ssize_t = int; size_t = unsigned int; cram_data_write_block_type = _cram_data_write_block_type]’
./libmaus2/bambam/parallel/BlockMergeControl.hpp:348:49: required from ‘void libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::enqueHeader() [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryQueryName]’
./libmaus2/bambam/parallel/BlockMergeControl.hpp:582:6: required from ‘libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::BlockMergeControl(libmaus2::parallel::SimpleThreadPool&, std::ostream&, libmaus2::autoarray::AutoArray<char>&, const std::vector<libmaus2::bambam::parallel::GenericInputControlStreamInfo>&, libmaus2::bitio::BitVector*, int, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t, const string&, const string&, libmaus2::digest::DigestInterface*, libmaus2::bambam::parallel::BlockMergeControlTypeBase::block_merge_output_format_t, bool, bool, bool, uint64_t, const string&) [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryQueryName; std::ostream = std::basic_ostream<char>; libmaus2::bitio::BitVector = libmaus2::bitio::BitVectorTemplate<long long unsigned int, false>; uint64_t = long long unsigned int; std::string = std::__cxx11::basic_string<char>]’
test/testparallelbamblocksort.cpp:217:68: required from ‘int parallelbamblocksort(const libmaus2::util::ArgInfo&, bool, bool, const string&, bool) [with order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferQueryNameComparator; heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryQueryName; bool create_dup_mark_info = false; std::string = std::__cxx11::basic_string<char>]’
test/testparallelbamblocksort.cpp:260:4: required from here
./libmaus2/bambam/parallel/BlockMergeControl.hpp:1197:46: warning: left shift count >= width of type [-Wshift-count-overflow]
1197 | package->subid = ((block->blockid + 1) << 32) | block->subblockid;
| ~~~~~~~~~~~~~~~~~~~~~~^~~~~~
./libmaus2/bambam/parallel/BlockMergeControl.hpp:1202:47: warning: left shift count >= width of type [-Wshift-count-overflow]
1202 | cpackage->subid = ((block->blockid + 1) << 32) | block->subblockid;
| ~~~~~~~~~~~~~~~~~~~~~~^~~~~~
./libmaus2/bambam/parallel/BlockMergeControl.hpp: In instantiation of ‘void libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::samCheckWritePendingQueue() [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryCoordinate]’:
./libmaus2/bambam/parallel/BlockMergeControl.hpp:1268:6: required from ‘void libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::sam_data_write_function(libmaus2::ssize_t, size_t, const char*, size_t, cram_data_write_block_type) [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryCoordinate; libmaus2::ssize_t = int; size_t = unsigned int; cram_data_write_block_type = _cram_data_write_block_type]’
./libmaus2/bambam/parallel/BlockMergeControl.hpp:1324:32: required from ‘static void libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::sam_data_write_function(void*, libmaus2::ssize_t, size_t, const char*, size_t, cram_data_write_block_type) [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryCoordinate; libmaus2::ssize_t = int; size_t = unsigned int; cram_data_write_block_type = _cram_data_write_block_type]’
./libmaus2/bambam/parallel/BlockMergeControl.hpp:348:49: required from ‘void libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::enqueHeader() [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryCoordinate]’
./libmaus2/bambam/parallel/BlockMergeControl.hpp:582:6: required from ‘libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::BlockMergeControl(libmaus2::parallel::SimpleThreadPool&, std::ostream&, libmaus2::autoarray::AutoArray<char>&, const std::vector<libmaus2::bambam::parallel::GenericInputControlStreamInfo>&, libmaus2::bitio::BitVector*, int, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t, const string&, const string&, libmaus2::digest::DigestInterface*, libmaus2::bambam::parallel::BlockMergeControlTypeBase::block_merge_output_format_t, bool, bool, bool, uint64_t, const string&) [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryCoordinate; std::ostream = std::basic_ostream<char>; libmaus2::bitio::BitVector = libmaus2::bitio::BitVectorTemplate<long long unsigned int, false>; uint64_t = long long unsigned int; std::string = std::__cxx11::basic_string<char>]’
test/testparallelbamblocksort.cpp:217:68: required from ‘int parallelbamblocksort(const libmaus2::util::ArgInfo&, bool, bool, const string&, bool) [with order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferPosComparator; heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryCoordinate; bool create_dup_mark_info = true; std::string = std::__cxx11::basic_string<char>]’
test/testparallelbamblocksort.cpp:270:4: required from here
./libmaus2/bambam/parallel/BlockMergeControl.hpp:1197:46: warning: left shift count >= width of type [-Wshift-count-overflow]
1197 | package->subid = ((block->blockid + 1) << 32) | block->subblockid;
| ~~~~~~~~~~~~~~~~~~~~~~^~~~~~
./libmaus2/bambam/parallel/BlockMergeControl.hpp:1202:47: warning: left shift count >= width of type [-Wshift-count-overflow]
1202 | cpackage->subid = ((block->blockid + 1) << 32) | block->subblockid;
| ~~~~~~~~~~~~~~~~~~~~~~^~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testfastqtobam-testfastqtobam.o `test -f 'test/testfastqtobam.cpp' || echo './'`test/testfastqtobam.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/index/ExternalMemoryIndexDecoder.hpp:23,
from test/testexternalmemoryindex.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘int main(int, char**)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testmapperm.cpp:20:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/index/ExternalMemoryIndexDecoder.hpp:23,
from test/testexternalmemoryindex.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘uint64_t libmaus2::index::ExternalMemoryIndexGenerator<_data_type, _base_level_log, _inner_level_log>::flush() [with _data_type = SerialisableUint64; unsigned int _base_level_log = 10; unsigned int _inner_level_log = 2]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/index/ExternalMemoryIndexDecoder.hpp:23,
from test/testexternalmemoryindex.cpp:20:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::index::ExternalMemoryIndexDecoder<_data_type, _base_level_log, _inner_level_log, _comparator>::setup(uint64_t) [with _data_type = SerialisableUint64; unsigned int _base_level_log = 10; unsigned int _inner_level_log = 2; _comparator = std::less<SerialisableUint64>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testsamrecoding-testsamrecoding.o `test -f 'test/testsamrecoding.cpp' || echo './'`test/testsamrecoding.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testdazzlerdb-testdazzlerdb.o `test -f 'test/testdazzlerdb.cpp' || echo './'`test/testdazzlerdb.cpp
In file included from test/testdazzlerdb.cpp:28:
./libmaus2/lcs/NP.hpp: In instantiation of ‘int64_t libmaus2::lcs::NP::npTemplate(iter_a, iter_a, iter_b, iter_b) [with iter_a = const unsigned char*; iter_b = const unsigned char*; bool self_check = true; int64_t = long long int]’:
./libmaus2/lcs/NP.hpp:118:43: required from ‘int64_t libmaus2::lcs::NP::np(iter_a, iter_a, iter_b, iter_b, bool) [with iter_a = const unsigned char*; iter_b = const unsigned char*; int64_t = long long int]’
./libmaus2/lcs/NP.hpp:106:23: required from here
./libmaus2/lcs/NP.hpp:912:46: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare]
912 | if ( AlignmentTraceContainer::capacity() <= std::min(an,bn)+ed )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
./libmaus2/lcs/NP.hpp: In instantiation of ‘int64_t libmaus2::lcs::NP::npTemplate(iter_a, iter_a, iter_b, iter_b) [with iter_a = const unsigned char*; iter_b = const unsigned char*; bool self_check = false; int64_t = long long int]’:
./libmaus2/lcs/NP.hpp:120:44: required from ‘int64_t libmaus2::lcs::NP::np(iter_a, iter_a, iter_b, iter_b, bool) [with iter_a = const unsigned char*; iter_b = const unsigned char*; int64_t = long long int]’
./libmaus2/lcs/NP.hpp:106:23: required from here
./libmaus2/lcs/NP.hpp:912:46: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare]
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testfastqtobam.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::FastqToBamControlSubReadPending*, std::vector<libmaus2::bambam::parallel::FastqToBamControlSubReadPending> >; _Distance = int; _Tp = libmaus2::bambam::parallel::FastqToBamControlSubReadPending; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::parallel::FastqToBamControlSubReadPendingHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::FastqToBamControlSubReadPending*, std::vector<libmaus2::bambam::parallel::FastqToBamControlSubReadPending> >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testfastqtobam.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::parallel::GenericInputControlCompressionPending&}; _Tp = libmaus2::bambam::parallel::GenericInputControlCompressionPending; _Alloc = std::allocator<libmaus2::bambam::parallel::GenericInputControlCompressionPending>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::parallel::GenericInputControlCompressionPending>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::parallel::GenericInputControlCompressionPending>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::parallel::FastqToBamControlSubReadPending&}; _Tp = libmaus2::bambam::parallel::FastqToBamControlSubReadPending; _Alloc = std::allocator<libmaus2::bambam::parallel::FastqToBamControlSubReadPending>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::parallel::FastqToBamControlSubReadPending>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testfastqtobam.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::FastqToBamControlSubReadPending*, std::vector<libmaus2::bambam::parallel::FastqToBamControlSubReadPending> >; _Distance = int; _Tp = libmaus2::bambam::parallel::FastqToBamControlSubReadPending; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::parallel::FastqToBamControlSubReadPendingHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::FastqToBamControlSubReadPending*, std::vector<libmaus2::bambam::parallel::FastqToBamControlSubReadPending> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testfastqtobam.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::parallel::FastqToBamControlSubReadPending}; _Tp = libmaus2::bambam::parallel::FastqToBamControlSubReadPending; _Alloc = std::allocator<libmaus2::bambam::parallel::FastqToBamControlSubReadPending>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::parallel::FastqToBamControlSubReadPending>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/dazzler/db/InputBase.hpp:21,
from ./libmaus2/dazzler/db/IndexBase.hpp:21,
from ./libmaus2/dazzler/db/DatabaseFile.hpp:22,
from ./libmaus2/dazzler/db/PartTrackContainer.hpp:21,
from ./libmaus2/dazzler/align/TandemVectorPartContainer.hpp:21,
from test/testdazzlerdb.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::dazzler::db::FastaInfo}; _Tp = libmaus2::dazzler::db::FastaInfo; _Alloc = std::allocator<libmaus2::dazzler::db::FastaInfo>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::dazzler::db::FastaInfo>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testfastqtobam.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::parallel::FastqToBamControl::checkWritePendingQueue()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::GenericInputControlCompressionPending*, std::vector<libmaus2::bambam::parallel::GenericInputControlCompressionPending> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::parallel::FastqToBamControl::checkCompressionPendingQueue()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::GenericInputControlCompressionPending*, std::vector<libmaus2::bambam::parallel::GenericInputControlCompressionPending> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::parallel::FastqToBamControl::checkSubReadPendingQueue()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::FastqToBamControlSubReadPending*, std::vector<libmaus2::bambam::parallel::FastqToBamControlSubReadPending> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testfastqtobam.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::parallel::FastqToBamControl::checkReadPendingQueue()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::FastqToBamControlSubReadPending*, std::vector<libmaus2::bambam::parallel::FastqToBamControlSubReadPending> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testfastqtobam.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::bambam::parallel::FastqToBamControl::genericInputControlBlockCompressionFinished(libmaus2::bambam::parallel::GenericInputControlCompressionPending)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::GenericInputControlCompressionPending*, std::vector<libmaus2::bambam::parallel::GenericInputControlCompressionPending> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testfastashred-testfastashred.o `test -f 'test/testfastashred.cpp' || echo './'`test/testfastashred.cpp
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::dazzler::db::DatabaseFile::DatabaseFile(const string&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::dazzler::db::FastaInfo*, std::vector<libmaus2::dazzler::db::FastaInfo> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/dazzler/db/InputBase.hpp:21,
from ./libmaus2/dazzler/db/IndexBase.hpp:21,
from ./libmaus2/dazzler/db/DatabaseFile.hpp:22,
from ./libmaus2/dazzler/db/PartTrackContainer.hpp:21,
from ./libmaus2/dazzler/align/TandemVectorPartContainer.hpp:21,
from test/testdazzlerdb.cpp:18:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<long long unsigned int, long long unsigned int>&}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testalignerspeed-testalignerspeed.o `test -f 'test/testalignerspeed.cpp' || echo './'`test/testalignerspeed.cpp
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::Chromosome&}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘std::pair<_FIter, _FIter> std::__equal_range(_ForwardIterator, _ForwardIterator, const _Tp&, _CompareItTp, _CompareTpIt) [with _ForwardIterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >; _Tp = libmaus2::bambam::Chromosome; _CompareItTp = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::ChromosomeVectorMerge::ChromosomeIndexComparator>; _CompareTpIt = __gnu_cxx::__ops::_Val_comp_iter<libmaus2::bambam::ChromosomeVectorMerge::ChromosomeIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2136 | __equal_range(_ForwardIterator __first, _ForwardIterator __last,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::BamAlignmentDecoderInfo}; _Tp = libmaus2::bambam::BamAlignmentDecoderInfo; _Alloc = std::allocator<libmaus2::bambam::BamAlignmentDecoderInfo>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::BamAlignmentDecoderInfo>::iterator’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testfastasingleline-testfastasingleline.o `test -f 'test/testfastasingleline.cpp' || echo './'`test/testfastasingleline.cpp
In file included from ./libmaus2/lcs/NPLinMem.hpp:22,
from ./libmaus2/lcs/NNPCor.hpp:24,
from test/testalignerspeed.cpp:18:
./libmaus2/lcs/NP.hpp: In instantiation of ‘int64_t libmaus2::lcs::NP::npTemplate(iter_a, iter_a, iter_b, iter_b) [with iter_a = const unsigned char*; iter_b = const unsigned char*; bool self_check = true; int64_t = long long int]’:
./libmaus2/lcs/NP.hpp:118:43: required from ‘int64_t libmaus2::lcs::NP::np(iter_a, iter_a, iter_b, iter_b, bool) [with iter_a = const unsigned char*; iter_b = const unsigned char*; int64_t = long long int]’
./libmaus2/lcs/NP.hpp:106:23: required from here
./libmaus2/lcs/NP.hpp:912:46: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare]
912 | if ( AlignmentTraceContainer::capacity() <= std::min(an,bn)+ed )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
./libmaus2/lcs/NP.hpp: In instantiation of ‘int64_t libmaus2::lcs::NP::npTemplate(iter_a, iter_a, iter_b, iter_b) [with iter_a = const unsigned char*; iter_b = const unsigned char*; bool self_check = false; int64_t = long long int]’:
./libmaus2/lcs/NP.hpp:120:44: required from ‘int64_t libmaus2::lcs::NP::np(iter_a, iter_a, iter_b, iter_b, bool) [with iter_a = const unsigned char*; iter_b = const unsigned char*; int64_t = long long int]’
./libmaus2/lcs/NP.hpp:106:23: required from here
./libmaus2/lcs/NP.hpp:912:46: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare]
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamAlignmentDecoderFactory.hpp:23,
from ./libmaus2/bambam/BamMultiAlignmentDecoderFactory.hpp:22,
from test/testsamrecoding.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long int}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long int}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testdazzleralignmentrewrite-testdazzleralignmentrewrite.o `test -f 'test/testdazzleralignmentrewrite.cpp' || echo './'`test/testdazzleralignmentrewrite.cpp
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2193 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::set<long long unsigned int> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::bambam::ChromosomeVectorMerge::ChromosomeVectorMerge(const std::vector<const std::vector<libmaus2::bambam::Chromosome>*>&, bool)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamCatHeader.hpp:26,
from ./libmaus2/bambam/BamMergeCoordinate.hpp:22,
from ./libmaus2/bambam/BamMultiAlignmentDecoderFactory.hpp:23,
from test/testsamrecoding.cpp:20:
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
279 | }
| ^
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::bambam::ProgramHeaderLineSet::ProgramHeaderLineSet(const string&)’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testxz-testxz.o `test -f 'test/testxz.cpp' || echo './'`test/testxz.cpp
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
79 | __move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b,
| ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1819:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1819 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testdazzlerindex-testdazzlerindex.o `test -f 'test/testdazzlerindex.cpp' || echo './'`test/testdazzlerindex.cpp
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1662 | __heap_select(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1937:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1937 | std::__heap_select(__first, __middle, __last, __comp);
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘std::vector<std::pair<long long unsigned int, long long unsigned int> > libmaus2::bambam::BamIndex::reg2chunks(uint64_t, uint64_t, uint64_t) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamAlignmentDecoderFactory.hpp:23,
from ./libmaus2/bambam/BamMultiAlignmentDecoderFactory.hpp:22,
from test/testsamrecoding.cpp:20:
./libmaus2/trie/TrieState.hpp:768:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
768 | }
| ^
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testargparser-testargparser.o `test -f 'test/testargparser.cpp' || echo './'`test/testargparser.cpp
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::bambam::ProgramHeaderLinesMerge::ProgramHeaderLinesMerge(const std::vector<const std::__cxx11::basic_string<char>*>&)’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::BamMergeCoordinateHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::BamMergeCoordinateHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘bool libmaus2::bambam::BamMergeTemplate<_heap_comparator_type, _sort_check_type>::readAlignmentInternal(bool) [with _heap_comparator_type = libmaus2::bambam::BamMergeCoordinateHeapComparator; _sort_check_type = libmaus2::bambam::BamCatHeader::IsCoordinateSorted]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::BamMergeTemplate<_heap_comparator_type, _sort_check_type>::init() [with _heap_comparator_type = libmaus2::bambam::BamMergeCoordinateHeapComparator; _sort_check_type = libmaus2::bambam::BamCatHeader::IsCoordinateSorted]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1924:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1924 | std::__move_median_to_first(__first, __first + 1, __mid, __last - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1925 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1924:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::bambam::ReadGroupVectorMerge::ReadGroupVectorMerge(const std::vector<const std::vector<libmaus2::bambam::ReadGroup>*>&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testdnarank-testdnarank.o `test -f 'test/testdnarank.cpp' || echo './'`test/testdnarank.cpp
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamAlignmentDecoderFactory.hpp:23,
from ./libmaus2/bambam/BamMultiAlignmentDecoderFactory.hpp:22,
from test/testsamrecoding.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testdazzlerindex.cpp:18:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<long long unsigned int&&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateThreadPoolReader]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = std::__cxx11::basic_istringstream<char>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testdazzlerindex.cpp:18:
/usr/include/c++/10/bits/stl_map.h: In function ‘int main(int, char**)’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testlowbits-testlowbits.o `test -f 'test/testlowbits.cpp' || echo './'`test/testlowbits.cpp
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testfastaexplode-testfastaexplode.o `test -f 'test/testfastaexplode.cpp' || echo './'`test/testfastaexplode.cpp
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/cassert:44,
from ./libmaus2/util/IntervalTree.hpp:27,
from ./libmaus2/gamma/GammaRLDecoder.hpp:28,
from ./libmaus2/wavelet/Utf8ToImpCompactHuffmanWaveletTree.hpp:29,
from ./libmaus2/wavelet/RlToHwtBase.hpp:30,
from test/testdnarank.cpp:29:
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtSmallAlphabet(const string&, const libmaus2::huffman::HuffmanTree&, uint64_t) [with entity_type = unsigned char; bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
test/testdnarank.cpp:76:169: required from ‘void testLong(const string&, uint64_t) [with rank_type = libmaus2::rank::DNARankTemplate<64>; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
test/testdnarank.cpp:213:51: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:812:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
812 | assert ( symtonodesp-symtonodes.begin() == symtonodevecoffsets[sym] );
/usr/include/c++/10/bits/vector.tcc: In function ‘int main(int, char**)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamAlignmentDecoderInfo*, std::vector<libmaus2::bambam::BamAlignmentDecoderInfo> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamAlignmentDecoderInfo*, std::vector<libmaus2::bambam::BamAlignmentDecoderInfo> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testfaextract-testfaextract.o `test -f 'test/testfaextract.cpp' || echo './'`test/testfaextract.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/rank/DNARankSMEMContext.hpp:22,
from ./libmaus2/rank/DNARank.hpp:21,
from ./libmaus2/rank/DNARankSuffixTreeNodeEnumerator.hpp:22,
from test/testdnarank.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >; _Distance = int; _Tp = libmaus2::rank::DNARankMEM; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::rank::DNARankTemplate<256>::DNARankMEMContComp>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >; _Distance = int; _Tp = libmaus2::rank::DNARankMEM; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::rank::DNARankTemplate<128>::DNARankMEMContComp>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >; _Distance = int; _Tp = libmaus2::rank::DNARankMEM; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::rank::DNARankTemplate<64>::DNARankMEMContComp>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/rank/DNARankSMEMContext.hpp:22,
from ./libmaus2/rank/DNARank.hpp:21,
from ./libmaus2/rank/DNARankSuffixTreeNodeEnumerator.hpp:22,
from test/testdnarank.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<libmaus2::rank::DNARankTemplate<256>::DNARankMEMContComp>]’:
/usr/include/c++/10/bits/stl_algo.h:1819:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
1819 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<libmaus2::rank::DNARankTemplate<128>::DNARankMEMContComp>]’:
/usr/include/c++/10/bits/stl_algo.h:1819:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<libmaus2::rank::DNARankTemplate<64>::DNARankMEMContComp>]’:
/usr/include/c++/10/bits/stl_algo.h:1819:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::rank::DNARankTemplate<256>::DNARankMEMContComp>]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::rank::DNARankTemplate<128>::DNARankMEMContComp>]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::rank::DNARankTemplate<64>::DNARankMEMContComp>]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testmurmur3-testmurmur3.o `test -f 'test/testmurmur3.cpp' || echo './'`test/testmurmur3.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/rank/DNARankSMEMContext.hpp:22,
from ./libmaus2/rank/DNARank.hpp:21,
from ./libmaus2/rank/DNARankSuffixTreeNodeEnumerator.hpp:22,
from test/testdnarank.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/rank/DNARankSMEMContext.hpp:22,
from ./libmaus2/rank/DNARank.hpp:21,
from ./libmaus2/rank/DNARankSuffixTreeNodeEnumerator.hpp:22,
from test/testdnarank.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeLeaf::symbolVector(std::vector<long long int>&) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testpairalign-testpairalign.o `test -f 'test/testpairalign.cpp' || echo './'`test/testpairalign.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/fastx/FastAIndex.hpp:22,
from test/testfaextract.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::fastx::FastAIndexEntry}; _Tp = libmaus2::fastx::FastAIndexEntry; _Alloc = std::allocator<libmaus2::fastx::FastAIndexEntry>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::fastx::FastAIndexEntry>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::fastx::FastAIndex::FastAIndex(std::istream&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::fastx::FastAIndexEntry*, std::vector<libmaus2::fastx::FastAIndexEntry> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from test/testpairalign.cpp:20:
./libmaus2/lcs/NP.hpp: In instantiation of ‘int64_t libmaus2::lcs::NP::npTemplate(iter_a, iter_a, iter_b, iter_b) [with iter_a = const unsigned char*; iter_b = const unsigned char*; bool self_check = true; int64_t = long long int]’:
./libmaus2/lcs/NP.hpp:118:43: required from ‘int64_t libmaus2::lcs::NP::np(iter_a, iter_a, iter_b, iter_b, bool) [with iter_a = const unsigned char*; iter_b = const unsigned char*; int64_t = long long int]’
./libmaus2/lcs/NP.hpp:106:23: required from here
./libmaus2/lcs/NP.hpp:912:46: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare]
912 | if ( AlignmentTraceContainer::capacity() <= std::min(an,bn)+ed )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
./libmaus2/lcs/NP.hpp: In instantiation of ‘int64_t libmaus2::lcs::NP::npTemplate(iter_a, iter_a, iter_b, iter_b) [with iter_a = const unsigned char*; iter_b = const unsigned char*; bool self_check = false; int64_t = long long int]’:
./libmaus2/lcs/NP.hpp:120:44: required from ‘int64_t libmaus2::lcs::NP::np(iter_a, iter_a, iter_b, iter_b, bool) [with iter_a = const unsigned char*; iter_b = const unsigned char*; int64_t = long long int]’
./libmaus2/lcs/NP.hpp:106:23: required from here
./libmaus2/lcs/NP.hpp:912:46: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare]
./libmaus2/lcs/NP.hpp: In instantiation of ‘int64_t libmaus2::lcs::NP::npTemplate(iter_a, iter_a, iter_b, iter_b) [with iter_a = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >; iter_b = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >; bool self_check = true; int64_t = long long int]’:
./libmaus2/lcs/NP.hpp:118:43: required from ‘int64_t libmaus2::lcs::NP::np(iter_a, iter_a, iter_b, iter_b, bool) [with iter_a = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >; iter_b = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >; int64_t = long long int]’
test/testpairalign.cpp:124:7: required from here
./libmaus2/lcs/NP.hpp:912:46: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare]
./libmaus2/lcs/NP.hpp: In instantiation of ‘int64_t libmaus2::lcs::NP::npTemplate(iter_a, iter_a, iter_b, iter_b) [with iter_a = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >; iter_b = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >; bool self_check = false; int64_t = long long int]’:
./libmaus2/lcs/NP.hpp:120:44: required from ‘int64_t libmaus2::lcs::NP::np(iter_a, iter_a, iter_b, iter_b, bool) [with iter_a = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >; iter_b = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >; int64_t = long long int]’
test/testpairalign.cpp:124:7: required from here
./libmaus2/lcs/NP.hpp:912:46: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare]
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/rank/DNARankSMEMContext.hpp:22,
from ./libmaus2/rank/DNARank.hpp:21,
from ./libmaus2/rank/DNARankSuffixTreeNodeEnumerator.hpp:22,
from test/testdnarank.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::rank::DNARankMEM&}; _Tp = libmaus2::rank::DNARankMEM; _Alloc = std::allocator<libmaus2::rank::DNARankMEM>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::rank::DNARankMEM>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testsplaytree-testsplaytree.o `test -f 'test/testsplaytree.cpp' || echo './'`test/testsplaytree.cpp
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::rank::DNARankTemplate<cachelinesize>::testFromRunLength(const std::vector<std::__cxx11::basic_string<char> >&, uint64_t) const [with unsigned int cachelinesize = 64]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::rank::DNARankTemplate<cachelinesize>::testFromRunLength(const std::vector<std::__cxx11::basic_string<char> >&, uint64_t) const [with unsigned int cachelinesize = 128]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::rank::DNARankTemplate<cachelinesize>::testFromRunLength(const std::vector<std::__cxx11::basic_string<char> >&, uint64_t) const [with unsigned int cachelinesize = 256]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::huffman::IndexEntry}; _Tp = libmaus2::huffman::IndexEntry; _Alloc = std::allocator<libmaus2::huffman::IndexEntry>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::huffman::IndexEntry>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/ContainerElementFreeList.hpp:21,
from ./libmaus2/util/SplayTree.hpp:23,
from test/testsplaytree.cpp:18:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int, std::allocator<long long unsigned int> > >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int, std::allocator<long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/ContainerElementFreeList.hpp:21,
from ./libmaus2/util/SplayTree.hpp:23,
from test/testsplaytree.cpp:18:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int, std::allocator<long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int, std::allocator<long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int, std::allocator<long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int, std::allocator<long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int, std::allocator<long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int, std::allocator<long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int, std::allocator<long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int, std::allocator<long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/util/ContainerElementFreeList.hpp:21,
from ./libmaus2/util/SplayTree.hpp:23,
from test/testsplaytree.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int, std::allocator<long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int, std::allocator<long long unsigned int> >::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/fastx/CharBuffer.hpp:22,
from ./libmaus2/aio/SynchronousFastReaderBase.hpp:24,
from ./libmaus2/fastx/FastAReader.hpp:24,
from test/testpairalign.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int, std::allocator<long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/fastx/CharBuffer.hpp:22,
from ./libmaus2/aio/SynchronousFastReaderBase.hpp:24,
from ./libmaus2/fastx/FastAReader.hpp:24,
from test/testpairalign.cpp:18:
/usr/include/c++/10/bits/stl_vector.h: In function ‘uint64_t libmaus2::index::ExternalMemoryIndexGenerator<_data_type, _base_level_log, _inner_level_log>::flush() [with _data_type = libmaus2::dazzler::align::OverlapMeta; unsigned int _base_level_log = 8; unsigned int _inner_level_log = 3]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/fastx/CharBuffer.hpp:22,
from ./libmaus2/aio/SynchronousFastReaderBase.hpp:24,
from ./libmaus2/fastx/FastAReader.hpp:24,
from test/testpairalign.cpp:18:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<libmaus2::rank::DNARankBiDirRange, long long unsigned int>}; _Tp = std::pair<libmaus2::rank::DNARankBiDirRange, long long unsigned int>; _Alloc = std::allocator<std::pair<libmaus2::rank::DNARankBiDirRange, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<libmaus2::rank::DNARankBiDirRange, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<libmaus2::rank::DNARankBiDirRange, long long unsigned int>}; _Tp = std::pair<libmaus2::rank::DNARankBiDirRange, long long unsigned int>; _Alloc = std::allocator<std::pair<libmaus2::rank::DNARankBiDirRange, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<libmaus2::rank::DNARankBiDirRange, long long unsigned int>*, std::vector<std::pair<libmaus2::rank::DNARankBiDirRange, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::rank::DNARankMEM}; _Tp = libmaus2::rank::DNARankMEM; _Alloc = std::allocator<libmaus2::rank::DNARankMEM>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::rank::DNARankMEM>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {libmaus2::rank::DNARankMEM}; _Tp = libmaus2::rank::DNARankMEM; _Alloc = std::allocator<libmaus2::rank::DNARankMEM>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::rank::DNARankTemplate<cachelinesize>::mem(iterator, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t, std::vector<libmaus2::rank::DNARankMEM>&) const [with iterator = char*; unsigned int cachelinesize = 128]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<libmaus2::rank::DNARankBiDirRange, long long unsigned int>*, std::vector<std::pair<libmaus2::rank::DNARankBiDirRange, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/util/ContainerElementFreeList.hpp:21,
from ./libmaus2/util/SplayTree.hpp:23,
from test/testsplaytree.cpp:18:
/usr/include/c++/10/bits/stl_vector.h: In function ‘bool addElement(libmaus2::util::SplayTree<value_type>&, std::set<value_type>&, const value_type&) [with value_type = long long unsigned int]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int, std::allocator<long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::rank::DNARankTemplate<cachelinesize>::mem(iterator, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t, std::vector<libmaus2::rank::DNARankMEM>&) const [with iterator = char*; unsigned int cachelinesize = 256]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<libmaus2::rank::DNARankBiDirRange, long long unsigned int>*, std::vector<std::pair<libmaus2::rank::DNARankBiDirRange, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
test/testsplaytree.cpp:49:1: note: parameter passing for argument of type ‘std::vector<long long unsigned int, std::allocator<long long unsigned int> >::iterator’ changed in GCC 7.1
49 | }
| ^
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::rank::DNARankTemplate<cachelinesize>::mem(iterator, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t, std::vector<libmaus2::rank::DNARankMEM>&) const [with iterator = char*; unsigned int cachelinesize = 64]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<libmaus2::rank::DNARankBiDirRange, long long unsigned int>*, std::vector<std::pair<libmaus2::rank::DNARankBiDirRange, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/util/ContainerElementFreeList.hpp:21,
from ./libmaus2/util/SplayTree.hpp:23,
from test/testsplaytree.cpp:18:
/usr/include/c++/10/bits/stl_vector.h: In function ‘bool eraseElement(libmaus2::util::SplayTree<value_type>&, std::set<value_type>&, const value_type&) [with value_type = long long unsigned int]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int, std::allocator<long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
test/testsplaytree.cpp:80:1: note: parameter passing for argument of type ‘std::vector<long long unsigned int, std::allocator<long long unsigned int> >::iterator’ changed in GCC 7.1
80 | }
| ^
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/util/ContainerElementFreeList.hpp:21,
from ./libmaus2/util/SplayTree.hpp:23,
from test/testsplaytree.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In function ‘void test2()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int, std::allocator<long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/util/ContainerElementFreeList.hpp:21,
from ./libmaus2/util/SplayTree.hpp:23,
from test/testsplaytree.cpp:18:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int, std::allocator<long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/ContainerElementFreeList.hpp:21,
from ./libmaus2/util/SplayTree.hpp:23,
from test/testsplaytree.cpp:18:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int, std::allocator<long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int, std::allocator<long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int, std::allocator<long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testbwtconstruction-testbwtconstruction.o `test -f 'test/testbwtconstruction.cpp' || echo './'`test/testbwtconstruction.cpp
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/rank/DNARankSMEMContext.hpp:22,
from ./libmaus2/rank/DNARank.hpp:21,
from ./libmaus2/rank/DNARankSuffixTreeNodeEnumerator.hpp:22,
from test/testdnarank.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::rank::DNARankTemplate<64>::DNARankMEMContComp>]’:
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
1662 | __heap_select(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::rank::DNARankTemplate<64>::DNARankMEMContComp>]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1937:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
1937 | std::__heap_select(__first, __middle, __last, __comp);
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘_ZNK8libmaus24rank15DNARankTemplateILj64EE10testSearchEjy._omp_fn.0’:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/rank/DNARankSMEMContext.hpp:22,
from ./libmaus2/rank/DNARank.hpp:21,
from ./libmaus2/rank/DNARankSuffixTreeNodeEnumerator.hpp:22,
from test/testdnarank.cpp:20:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/rank/DNARankSMEMContext.hpp:22,
from ./libmaus2/rank/DNARank.hpp:21,
from ./libmaus2/rank/DNARankSuffixTreeNodeEnumerator.hpp:22,
from test/testdnarank.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::rank::DNARankTemplate<128>::DNARankMEMContComp>]’:
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
1662 | __heap_select(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::rank::DNARankTemplate<128>::DNARankMEMContComp>]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1937:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
1937 | std::__heap_select(__first, __middle, __last, __comp);
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘_ZNK8libmaus24rank15DNARankTemplateILj128EE10testSearchEjy._omp_fn.0’:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/rank/DNARankSMEMContext.hpp:22,
from ./libmaus2/rank/DNARank.hpp:21,
from ./libmaus2/rank/DNARankSuffixTreeNodeEnumerator.hpp:22,
from test/testdnarank.cpp:20:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testbwtconstructionfasta-testbwtconstructionfasta.o `test -f 'test/testbwtconstructionfasta.cpp' || echo './'`test/testbwtconstructionfasta.cpp
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/rank/DNARankSMEMContext.hpp:22,
from ./libmaus2/rank/DNARank.hpp:21,
from ./libmaus2/rank/DNARankSuffixTreeNodeEnumerator.hpp:22,
from test/testdnarank.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::rank::DNARankTemplate<256>::DNARankMEMContComp>]’:
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
1662 | __heap_select(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::rank::DNARankTemplate<256>::DNARankMEMContComp>]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1937:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
1937 | std::__heap_select(__first, __middle, __last, __comp);
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘_ZNK8libmaus24rank15DNARankTemplateILj256EE10testSearchEjy._omp_fn.0’:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/rank/DNARankSMEMContext.hpp:22,
from ./libmaus2/rank/DNARank.hpp:21,
from ./libmaus2/rank/DNARankSuffixTreeNodeEnumerator.hpp:22,
from test/testdnarank.cpp:20:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::rank::DNARankMEM*, std::vector<libmaus2::rank::DNARankMEM> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/rank/DNARankSMEMContext.hpp:22,
from ./libmaus2/rank/DNARank.hpp:21,
from ./libmaus2/rank/DNARankSuffixTreeNodeEnumerator.hpp:22,
from test/testdnarank.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::huffman::RLEncoderBaseTemplate<_bit_writer_type>::implicitFlush() [with _bit_writer_type = libmaus2::huffman::HuffmanEncoderFileTemplate<libmaus2::aio::SynchronousGenericOutput<unsigned char>, libmaus2::bitio::FastWriteBitWriterTemplate<unsigned char, libmaus2::aio::PutOutputIterator<unsigned char, libmaus2::aio::SynchronousGenericOutput<unsigned char> >, 128, 255, false> >]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testarrayinput-testarrayinput.o `test -f 'test/testarrayinput.cpp' || echo './'`test/testarrayinput.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testsymcnt-testsymcnt.o `test -f 'test/testsymcnt.cpp' || echo './'`test/testsymcnt.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/ArrayInputStreamBuffer.hpp:24,
from ./libmaus2/aio/ArrayInputStream.hpp:22,
from test/testbwtconstructionfasta.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::fastx::DNAIndexMetaDataSequence}; _Tp = libmaus2::fastx::DNAIndexMetaDataSequence; _Alloc = std::allocator<libmaus2::fastx::DNAIndexMetaDataSequence>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::fastx::DNAIndexMetaDataSequence>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/ArrayInputStreamBuffer.hpp:24,
from ./libmaus2/aio/ArrayInputStream.hpp:22,
from test/testbwtconstructionfasta.cpp:18:
/usr/include/c++/10/bits/stl_vector.h: In function ‘static int libmaus2::fastx::FastAToCompact4BigBandBiDir::fastaToCompact4BigBandBiDir(const std::vector<std::__cxx11::basic_string<char> >&, std::ostream*, bool, std::string)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/ArrayInputStreamBuffer.hpp:24,
from ./libmaus2/aio/ArrayInputStream.hpp:22,
from test/testbwtconstructionfasta.cpp:18:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::fastx::DNAIndexMetaDataSequence*, std::vector<libmaus2::fastx::DNAIndexMetaDataSequence> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from test/testbwtconstructionfasta.cpp:24:
./libmaus2/fastx/FastAToCompact4BigBandBiDir.hpp:577:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
577 | }
| ^
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testgammapd-testgammapd.o `test -f 'test/testgammapd.cpp' || echo './'`test/testgammapd.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testdnasuffixtrav-testdnasuffixtrav.o `test -f 'test/testdnasuffixtrav.cpp' || echo './'`test/testdnasuffixtrav.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/util/NumberSerialisation.hpp:28,
from ./libmaus2/gamma/GammaPDIndexDecoderBase.hpp:22,
from ./libmaus2/gamma/GammaPDIndexDecoder.hpp:21,
from ./libmaus2/gamma/GammaPDDecoder.hpp:21,
from test/testgammapd.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/util/NumberSerialisation.hpp:28,
from ./libmaus2/gamma/GammaPDIndexDecoderBase.hpp:22,
from ./libmaus2/gamma/GammaPDIndexDecoder.hpp:21,
from ./libmaus2/gamma/GammaPDDecoder.hpp:21,
from test/testgammapd.cpp:18:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::gamma::GammaPDIndexDecoder::GammaPDIndexDecoder(const std::vector<std::__cxx11::basic_string<char> >&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/util/NumberSerialisation.hpp:28,
from ./libmaus2/gamma/GammaPDIndexDecoderBase.hpp:22,
from ./libmaus2/gamma/GammaPDIndexDecoder.hpp:21,
from ./libmaus2/gamma/GammaPDDecoder.hpp:21,
from test/testgammapd.cpp:18:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/SymCountEncoder.hpp:23,
from test/testsymcnt.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/SymCountEncoder.hpp:23,
from test/testsymcnt.cpp:18:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeLeaf::symbolVector(std::vector<long long int>&) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘int main()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testserialisedsorting-testserialisedsorting.o `test -f 'test/testserialisedsorting.cpp' || echo './'`test/testserialisedsorting.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/SymCountEncoder.hpp:23,
from test/testsymcnt.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::huffman::IndexEntry}; _Tp = libmaus2::huffman::IndexEntry; _Alloc = std::allocator<libmaus2::huffman::IndexEntry>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::huffman::IndexEntry>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::huffman::SymCountEncoderBaseTemplate<_bit_writer_type>::implicitFlush() [with _bit_writer_type = libmaus2::huffman::HuffmanEncoderFileTemplate<libmaus2::aio::SynchronousGenericOutput<unsigned char>, libmaus2::bitio::FastWriteBitWriterTemplate<unsigned char, libmaus2::aio::PutOutputIterator<unsigned char, libmaus2::aio::SynchronousGenericOutput<unsigned char> >, 128, 255, false> >]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘void testsymcnt()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::huffman::SymBitEncoderBaseTemplate<_bit_writer_type>::flush() [with _bit_writer_type = libmaus2::huffman::HuffmanEncoderFileTemplate<libmaus2::aio::SynchronousGenericOutput<unsigned char>, libmaus2::bitio::FastWriteBitWriterTemplate<unsigned char, libmaus2::aio::PutOutputIterator<unsigned char, libmaus2::aio::SynchronousGenericOutput<unsigned char> >, 128, 255, false> >]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘void testsymbit()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testbamnumericalindex-testbamnumericalindex.o `test -f 'test/testbamnumericalindex.cpp' || echo './'`test/testbamnumericalindex.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/aio/BufferedOutput.hpp:23,
from ./libmaus2/sorting/MergingReadBack.hpp:23,
from ./libmaus2/sorting/SortingBufferedOutputFile.hpp:22,
from test/testserialisedsorting.cpp:18:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Obj*, std::vector<Obj> >; _Distance = int; _Tp = Obj; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Obj*, std::vector<Obj> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/aio/BufferedOutput.hpp:23,
from ./libmaus2/sorting/MergingReadBack.hpp:23,
from ./libmaus2/sorting/SortingBufferedOutputFile.hpp:22,
from test/testserialisedsorting.cpp:18:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Obj*, std::vector<Obj> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Obj*, std::vector<Obj> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Obj*, std::vector<Obj> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Obj*, std::vector<Obj> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Obj*, std::vector<Obj> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Obj*, std::vector<Obj> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Obj*, std::vector<Obj> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/BufferedOutput.hpp:23,
from ./libmaus2/sorting/MergingReadBack.hpp:23,
from ./libmaus2/sorting/SortingBufferedOutputFile.hpp:22,
from test/testserialisedsorting.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Obj&}; _Tp = Obj; _Alloc = std::allocator<Obj>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<Obj>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::aio::SerialisingSortingBufferedOutput<Obj, std::less<Obj> >::BlockDescriptor}; _Tp = libmaus2::aio::SerialisingSortingBufferedOutput<Obj, std::less<Obj> >::BlockDescriptor; _Alloc = std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<Obj, std::less<Obj> >::BlockDescriptor>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::aio::SerialisingSortingBufferedOutput<Obj, std::less<Obj> >::BlockDescriptor, std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<Obj, std::less<Obj> >::BlockDescriptor> >::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/aio/BufferedOutput.hpp:23,
from ./libmaus2/sorting/MergingReadBack.hpp:23,
from ./libmaus2/sorting/SortingBufferedOutputFile.hpp:22,
from test/testserialisedsorting.cpp:18:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, Obj>*, std::vector<std::pair<long long unsigned int, Obj>, std::allocator<std::pair<long long unsigned int, Obj> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, Obj>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::sorting::SerialisingMergingReadBack<Obj, std::less<Obj> >::HeapOrderAdapter>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, Obj>*, std::vector<std::pair<long long unsigned int, Obj>, std::allocator<std::pair<long long unsigned int, Obj> > > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/BufferedOutput.hpp:23,
from ./libmaus2/sorting/MergingReadBack.hpp:23,
from ./libmaus2/sorting/SortingBufferedOutputFile.hpp:22,
from test/testserialisedsorting.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, Obj>}; _Tp = std::pair<long long unsigned int, Obj>; _Alloc = std::allocator<std::pair<long long unsigned int, Obj> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, Obj>, std::allocator<std::pair<long long unsigned int, Obj> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::sorting::SerialisingMergingReadBack<_data_type, _order_type>::SerialisingMergingReadBack(const string&, const std::vector<typename libmaus2::aio::SerialisingSortingBufferedOutput<_data_type, _order_type>::BlockDescriptor>&, libmaus2::sorting::SerialisingMergingReadBack<_data_type, _order_type>::order_type&, uint64_t) [with _data_type = Obj; _order_type = std::less<Obj>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, Obj>*, std::vector<std::pair<long long unsigned int, Obj>, std::allocator<std::pair<long long unsigned int, Obj> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<Obj, std::less<Obj> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>}; _Tp = libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<Obj, std::less<Obj> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>; _Alloc = std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<Obj, std::less<Obj> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<Obj, std::less<Obj> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<Obj, std::less<Obj> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static void libmaus2::sorting::InPlaceParallelSort::mergestepRecLevel(iterator, uint64_t, uint64_t, order_type, base_sort&, int, int, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<iterator, order_type, base_sort> >&, uint64_t) [with iterator = char**; order_type = libmaus2::aio::SerialisingBuffer<Obj, std::less<Obj> >::Comparator; base_sort = libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<Obj, std::less<Obj> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<Obj, std::less<Obj> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<Obj, std::less<Obj> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘std::pair<long long unsigned int, long long unsigned int> libmaus2::aio::SerialisingBuffer<_data_type, _order_type>::flush() [with _data_type = Obj; _order_type = std::less<Obj>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<Obj, std::less<Obj> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<Obj, std::less<Obj> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<Obj, std::less<Obj> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In destructor ‘std::unique_ptr<_Tp, _Dp>::~unique_ptr() [with _Tp = libmaus2::sorting::SerialisingSortingBufferedOutputFile<Obj>; _Dp = std::default_delete<libmaus2::sorting::SerialisingSortingBufferedOutputFile<Obj> >]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::aio::SerialisingSortingBufferedOutput<Obj, std::less<Obj> >::BlockDescriptor*, std::vector<libmaus2::aio::SerialisingSortingBufferedOutput<Obj, std::less<Obj> >::BlockDescriptor, std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<Obj, std::less<Obj> >::BlockDescriptor> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static std::vector<typename libmaus2::aio::SerialisingSortingBufferedOutput<_data_type, _order_type>::BlockDescriptor> libmaus2::sorting::SerialisingMergingReadBack<_data_type, _order_type>::mergeStep(const string&, const std::vector<typename libmaus2::aio::SerialisingSortingBufferedOutput<_data_type, _order_type>::BlockDescriptor>&, libmaus2::sorting::SerialisingMergingReadBack<_data_type, _order_type>::order_type&, uint64_t, uint64_t) [with _data_type = Obj; _order_type = std::less<Obj>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, Obj>*, std::vector<std::pair<long long unsigned int, Obj>, std::allocator<std::pair<long long unsigned int, Obj> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/BufferedOutput.hpp:23,
from ./libmaus2/sorting/MergingReadBack.hpp:23,
from ./libmaus2/sorting/SortingBufferedOutputFile.hpp:22,
from test/testserialisedsorting.cpp:18:
/usr/include/c++/10/bits/stl_vector.h: In function ‘void checkSortingSerialised()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Obj*, std::vector<Obj> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/BufferedOutput.hpp:23,
from ./libmaus2/sorting/MergingReadBack.hpp:23,
from ./libmaus2/sorting/SortingBufferedOutputFile.hpp:22,
from test/testserialisedsorting.cpp:18:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::aio::SerialisingSortingBufferedOutput<Obj, std::less<Obj> >::BlockDescriptor*, std::vector<libmaus2::aio::SerialisingSortingBufferedOutput<Obj, std::less<Obj> >::BlockDescriptor, std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<Obj, std::less<Obj> >::BlockDescriptor> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/aio/BufferedOutput.hpp:23,
from ./libmaus2/sorting/MergingReadBack.hpp:23,
from ./libmaus2/sorting/SortingBufferedOutputFile.hpp:22,
from test/testserialisedsorting.cpp:18:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Obj*, std::vector<Obj> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Obj*, std::vector<Obj> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<Obj*, std::vector<Obj> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/BufferedOutput.hpp:23,
from ./libmaus2/sorting/MergingReadBack.hpp:23,
from ./libmaus2/sorting/SortingBufferedOutputFile.hpp:22,
from test/testserialisedsorting.cpp:18:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::aio::SerialisingSortingBufferedOutput<Obj, std::less<Obj> >::BlockDescriptor*, std::vector<libmaus2::aio::SerialisingSortingBufferedOutput<Obj, std::less<Obj> >::BlockDescriptor, std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<Obj, std::less<Obj> >::BlockDescriptor> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::aio::SerialisingSortingBufferedOutput<Obj, std::less<Obj> >::BlockDescriptor*, std::vector<libmaus2::aio::SerialisingSortingBufferedOutput<Obj, std::less<Obj> >::BlockDescriptor, std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<Obj, std::less<Obj> >::BlockDescriptor> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, Obj>*, std::vector<std::pair<long long unsigned int, Obj>, std::allocator<std::pair<long long unsigned int, Obj> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::aio::SerialisingSortingBufferedOutput<Obj, std::less<Obj> >::BlockDescriptor*, std::vector<libmaus2::aio::SerialisingSortingBufferedOutput<Obj, std::less<Obj> >::BlockDescriptor, std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<Obj, std::less<Obj> >::BlockDescriptor> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/ArrayInputStreamBuffer.hpp:24,
from ./libmaus2/aio/ArrayInputStream.hpp:22,
from test/testdnasuffixtrav.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::fastx::DNAIndexMetaDataSequence}; _Tp = libmaus2::fastx::DNAIndexMetaDataSequence; _Alloc = std::allocator<libmaus2::fastx::DNAIndexMetaDataSequence>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::fastx::DNAIndexMetaDataSequence>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testnpl-testnpl.o `test -f 'test/testnpl.cpp' || echo './'`test/testnpl.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamnumericalindex.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamnumericalindex.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamnumericalindex.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >; _Distance = int; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::lz::BgzfThreadQueueElementHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/ArrayInputStreamBuffer.hpp:24,
from ./libmaus2/aio/ArrayInputStream.hpp:22,
from test/testdnasuffixtrav.cpp:18:
/usr/include/c++/10/bits/stl_vector.h: In function ‘static int libmaus2::fastx::FastAToCompact4BigBandBiDir::fastaToCompact4BigBandBiDir(const std::vector<std::__cxx11::basic_string<char> >&, std::ostream*, bool, std::string)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/ArrayInputStreamBuffer.hpp:24,
from ./libmaus2/aio/ArrayInputStream.hpp:22,
from test/testdnasuffixtrav.cpp:18:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::fastx::DNAIndexMetaDataSequence*, std::vector<libmaus2::fastx::DNAIndexMetaDataSequence> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from test/testdnasuffixtrav.cpp:24:
./libmaus2/fastx/FastAToCompact4BigBandBiDir.hpp:577:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
577 | }
| ^
In file included from ./libmaus2/aio/ArrayInputStreamBuffer.hpp:24,
from ./libmaus2/aio/ArrayInputStream.hpp:22,
from test/testdnasuffixtrav.cpp:18:
./libmaus2/autoarray/AutoArray.hpp: In function ‘void transform(const string&)’:
./libmaus2/autoarray/AutoArray.hpp:1132:5: warning: ‘<anonymous>’ may be used uninitialized in this function [-Wmaybe-uninitialized]
1132 | array[i] = N();
| ^~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamnumericalindex.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from test/testnpl.cpp:19:
./libmaus2/lcs/NPL.hpp: In instantiation of ‘libmaus2::lcs::NPL::index_type libmaus2::lcs::NPL::np(iter_a, iter_a, iter_b, iter_b, libmaus2::lcs::NPL::index_type) [with iter_a = const unsigned char*; iter_b = const unsigned char*; libmaus2::lcs::NPL::index_type = long long int]’:
./libmaus2/lcs/NPL.hpp:90:23: required from here
./libmaus2/lcs/NPL.hpp:514:46: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare]
514 | if ( AlignmentTraceContainer::capacity() <= std::min(an,bn)+ed )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/lcs/NPLinMem.hpp:22,
from test/testnpl.cpp:18:
./libmaus2/lcs/NP.hpp: In instantiation of ‘int64_t libmaus2::lcs::NP::npTemplate(iter_a, iter_a, iter_b, iter_b) [with iter_a = const unsigned char*; iter_b = const unsigned char*; bool self_check = true; int64_t = long long int]’:
./libmaus2/lcs/NP.hpp:118:43: required from ‘int64_t libmaus2::lcs::NP::np(iter_a, iter_a, iter_b, iter_b, bool) [with iter_a = const unsigned char*; iter_b = const unsigned char*; int64_t = long long int]’
./libmaus2/lcs/NP.hpp:106:23: required from here
./libmaus2/lcs/NP.hpp:912:46: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare]
912 | if ( AlignmentTraceContainer::capacity() <= std::min(an,bn)+ed )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
./libmaus2/lcs/NP.hpp: In instantiation of ‘int64_t libmaus2::lcs::NP::npTemplate(iter_a, iter_a, iter_b, iter_b) [with iter_a = const unsigned char*; iter_b = const unsigned char*; bool self_check = false; int64_t = long long int]’:
./libmaus2/lcs/NP.hpp:120:44: required from ‘int64_t libmaus2::lcs::NP::np(iter_a, iter_a, iter_b, iter_b, bool) [with iter_a = const unsigned char*; iter_b = const unsigned char*; int64_t = long long int]’
./libmaus2/lcs/NP.hpp:106:23: required from here
./libmaus2/lcs/NP.hpp:912:46: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare]
./libmaus2/lcs/NP.hpp: In instantiation of ‘int64_t libmaus2::lcs::NP::npTemplate(iter_a, iter_a, iter_b, iter_b) [with iter_a = __gnu_cxx::__normal_iterator<const char*, std::__cxx11::basic_string<char> >; iter_b = __gnu_cxx::__normal_iterator<const char*, std::__cxx11::basic_string<char> >; bool self_check = true; int64_t = long long int]’:
./libmaus2/lcs/NP.hpp:118:43: required from ‘int64_t libmaus2::lcs::NP::np(iter_a, iter_a, iter_b, iter_b, bool) [with iter_a = __gnu_cxx::__normal_iterator<const char*, std::__cxx11::basic_string<char> >; iter_b = __gnu_cxx::__normal_iterator<const char*, std::__cxx11::basic_string<char> >; int64_t = long long int]’
test/testnpl.cpp:53:4: required from here
./libmaus2/lcs/NP.hpp:912:46: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare]
./libmaus2/lcs/NP.hpp: In instantiation of ‘int64_t libmaus2::lcs::NP::npTemplate(iter_a, iter_a, iter_b, iter_b) [with iter_a = __gnu_cxx::__normal_iterator<const char*, std::__cxx11::basic_string<char> >; iter_b = __gnu_cxx::__normal_iterator<const char*, std::__cxx11::basic_string<char> >; bool self_check = false; int64_t = long long int]’:
./libmaus2/lcs/NP.hpp:120:44: required from ‘int64_t libmaus2::lcs::NP::np(iter_a, iter_a, iter_b, iter_b, bool) [with iter_a = __gnu_cxx::__normal_iterator<const char*, std::__cxx11::basic_string<char> >; iter_b = __gnu_cxx::__normal_iterator<const char*, std::__cxx11::basic_string<char> >; int64_t = long long int]’
test/testnpl.cpp:53:4: required from here
./libmaus2/lcs/NP.hpp:912:46: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare]
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::lz::BgzfThreadQueueElement&}; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Alloc = std::allocator<libmaus2::lz::BgzfThreadQueueElement>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> >::iterator’ changed in GCC 7.1
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamnumericalindex.cpp:19:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamnumericalindex.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testkcnt-testkcnt.o `test -f 'test/testkcnt.cpp' || echo './'`test/testkcnt.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamnumericalindex.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >; _Distance = int; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::lz::BgzfInflateBlockIdComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >; _Distance = int; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::lz::BgzfInflateBlockIdComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamnumericalindex.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::lz::BgzfInflateParallel::BgzfInflateParallel(std::istream&, uint64_t)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘libmaus2::lz::BgzfInflateInfo libmaus2::lz::BgzfInflateParallel::readAndInfo(char*, uint64_t)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::lz::BgzfInflateParallelThreadCallable::run()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamnumericalindex.cpp:19:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamnumericalindex.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamnumericalindex.cpp:19:
./libmaus2/trie/TrieState.hpp:768:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
768 | }
| ^
./libmaus2/trie/TrieState.hpp:768:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamnumericalindex.cpp:19:
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamnumericalindex.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from /usr/include/c++/10/functional:62,
from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
from /usr/include/c++/10/algorithm:74,
from ./libmaus2/fastx/acgtnMap.hpp:26,
from ./libmaus2/fastx/LineBufferFastAReader.hpp:22,
from ./libmaus2/fastx/KmerCount.hpp:23,
from test/testkcnt.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from /usr/include/c++/10/functional:62,
from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
from /usr/include/c++/10/algorithm:74,
from ./libmaus2/fastx/acgtnMap.hpp:26,
from ./libmaus2/fastx/LineBufferFastAReader.hpp:22,
from ./libmaus2/fastx/KmerCount.hpp:23,
from test/testkcnt.cpp:18:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testintervaltree-testintervaltree.o `test -f 'test/testintervaltree.cpp' || echo './'`test/testintervaltree.cpp
In file included from /usr/include/c++/10/vector:72,
from /usr/include/c++/10/functional:62,
from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
from /usr/include/c++/10/algorithm:74,
from ./libmaus2/fastx/acgtnMap.hpp:26,
from ./libmaus2/fastx/LineBufferFastAReader.hpp:22,
from ./libmaus2/fastx/KmerCount.hpp:23,
from test/testkcnt.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::BlockDescriptor}; _Tp = libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::BlockDescriptor; _Alloc = std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::BlockDescriptor>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::BlockDescriptor, std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::BlockDescriptor> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/fastx/acgtnMap.hpp:26,
from ./libmaus2/fastx/LineBufferFastAReader.hpp:22,
from ./libmaus2/fastx/KmerCount.hpp:23,
from test/testkcnt.cpp:18:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::fastx::KmerCount::KmerObject>*, std::vector<std::pair<long long unsigned int, libmaus2::fastx::KmerCount::KmerObject>, std::allocator<std::pair<long long unsigned int, libmaus2::fastx::KmerCount::KmerObject> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, libmaus2::fastx::KmerCount::KmerObject>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::sorting::SerialisingMergingReadBack<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::HeapOrderAdapter>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::fastx::KmerCount::KmerObject>*, std::vector<std::pair<long long unsigned int, libmaus2::fastx::KmerCount::KmerObject>, std::allocator<std::pair<long long unsigned int, libmaus2::fastx::KmerCount::KmerObject> > > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from /usr/include/c++/10/functional:62,
from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
from /usr/include/c++/10/algorithm:74,
from ./libmaus2/fastx/acgtnMap.hpp:26,
from ./libmaus2/fastx/LineBufferFastAReader.hpp:22,
from ./libmaus2/fastx/KmerCount.hpp:23,
from test/testkcnt.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, libmaus2::fastx::KmerCount::KmerObject>}; _Tp = std::pair<long long unsigned int, libmaus2::fastx::KmerCount::KmerObject>; _Alloc = std::allocator<std::pair<long long unsigned int, libmaus2::fastx::KmerCount::KmerObject> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, libmaus2::fastx::KmerCount::KmerObject>, std::allocator<std::pair<long long unsigned int, libmaus2::fastx::KmerCount::KmerObject> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testbamgetrefreg-testbamgetrefreg.o `test -f 'test/testbamgetrefreg.cpp' || echo './'`test/testbamgetrefreg.cpp
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::sorting::SerialisingMergingReadBack<_data_type, _order_type>::SerialisingMergingReadBack(const string&, const std::vector<typename libmaus2::aio::SerialisingSortingBufferedOutput<_data_type, _order_type>::BlockDescriptor>&, libmaus2::sorting::SerialisingMergingReadBack<_data_type, _order_type>::order_type&, uint64_t) [with _data_type = libmaus2::fastx::KmerCount::KmerObject; _order_type = std::less<libmaus2::fastx::KmerCount::KmerObject>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::fastx::KmerCount::KmerObject>*, std::vector<std::pair<long long unsigned int, libmaus2::fastx::KmerCount::KmerObject>, std::allocator<std::pair<long long unsigned int, libmaus2::fastx::KmerCount::KmerObject> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>}; _Tp = libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>; _Alloc = std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static void libmaus2::sorting::InPlaceParallelSort::mergestepRecLevel(iterator, uint64_t, uint64_t, order_type, base_sort&, int, int, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<iterator, order_type, base_sort> >&, uint64_t) [with iterator = char**; order_type = libmaus2::aio::SerialisingBuffer<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::Comparator; base_sort = libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/teststringgraph-teststringgraph.o `test -f 'test/teststringgraph.cpp' || echo './'`test/teststringgraph.cpp
/usr/include/c++/10/bits/vector.tcc: In member function ‘std::pair<long long unsigned int, long long unsigned int> libmaus2::aio::SerialisingBuffer<_data_type, _order_type>::flush() [with _data_type = libmaus2::fastx::KmerCount::KmerObject; _order_type = std::less<libmaus2::fastx::KmerCount::KmerObject>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In destructor ‘libmaus2::sorting::SerialisingSortingBufferedOutputFile<libmaus2::fastx::KmerCount::KmerObject>::~SerialisingSortingBufferedOutputFile()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::BlockDescriptor*, std::vector<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::BlockDescriptor, std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::BlockDescriptor> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In destructor ‘std::unique_ptr<_Tp, _Dp>::~unique_ptr() [with _Tp = libmaus2::sorting::SerialisingSortingBufferedOutputFile<libmaus2::fastx::KmerCount::KmerObject>; _Dp = std::default_delete<libmaus2::sorting::SerialisingSortingBufferedOutputFile<libmaus2::fastx::KmerCount::KmerObject> >]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::BlockDescriptor*, std::vector<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::BlockDescriptor, std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::BlockDescriptor> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static std::vector<typename libmaus2::aio::SerialisingSortingBufferedOutput<_data_type, _order_type>::BlockDescriptor> libmaus2::sorting::SerialisingMergingReadBack<_data_type, _order_type>::mergeStep(const string&, const std::vector<typename libmaus2::aio::SerialisingSortingBufferedOutput<_data_type, _order_type>::BlockDescriptor>&, libmaus2::sorting::SerialisingMergingReadBack<_data_type, _order_type>::order_type&, uint64_t, uint64_t) [with _data_type = libmaus2::fastx::KmerCount::KmerObject; _order_type = std::less<libmaus2::fastx::KmerCount::KmerObject>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::fastx::KmerCount::KmerObject>*, std::vector<std::pair<long long unsigned int, libmaus2::fastx::KmerCount::KmerObject>, std::allocator<std::pair<long long unsigned int, libmaus2::fastx::KmerCount::KmerObject> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘libmaus2::sorting::SerialisingSortingBufferedOutputFile<_data_type, _order_type>::merger_ptr_type libmaus2::sorting::SerialisingSortingBufferedOutputFile<_data_type, _order_type>::getMerger(uint64_t, uint64_t, int, std::ostream*) [with _data_type = libmaus2::fastx::KmerCount::KmerObject; _order_type = std::less<libmaus2::fastx::KmerCount::KmerObject>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::BlockDescriptor*, std::vector<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::BlockDescriptor, std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::BlockDescriptor> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::BlockDescriptor*, std::vector<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::BlockDescriptor, std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::BlockDescriptor> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static void libmaus2::sorting::SerialisingSortingBufferedOutputFile<_data_type, _order_type>::reduce(const std::vector<std::__cxx11::basic_string<char> >&, const string&, uint64_t, uint64_t, uint64_t, uint64_t, int, std::ostream*) [with _data_type = libmaus2::fastx::KmerCount::KmerObject; _order_type = std::less<libmaus2::fastx::KmerCount::KmerObject>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<char**, libmaus2::aio::SerialisingBuffer<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::Comparator, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::BlockDescriptor*, std::vector<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::BlockDescriptor, std::allocator<libmaus2::aio::SerialisingSortingBufferedOutput<libmaus2::fastx::KmerCount::KmerObject, std::less<libmaus2::fastx::KmerCount::KmerObject> >::BlockDescriptor> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::fastx::KmerCount::KmerObject>*, std::vector<std::pair<long long unsigned int, libmaus2::fastx::KmerCount::KmerObject>, std::allocator<std::pair<long long unsigned int, libmaus2::fastx::KmerCount::KmerObject> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/dazzler/db/TrackAnno.hpp:22,
from ./libmaus2/dazzler/db/Track.hpp:21,
from ./libmaus2/dazzler/db/DatabaseFile.hpp:23,
from ./libmaus2/dazzler/stringgraph/StringGraph.hpp:22,
from test/teststringgraph.cpp:18:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int>*, std::vector<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1819:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int>*, std::vector<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int> > >’ changed in GCC 7.1
1819 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int>*, std::vector<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int>*, std::vector<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int>*, std::vector<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int>*, std::vector<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int> > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/dazzler/db/TrackAnno.hpp:22,
from ./libmaus2/dazzler/db/Track.hpp:21,
from ./libmaus2/dazzler/db/DatabaseFile.hpp:23,
from ./libmaus2/dazzler/stringgraph/StringGraph.hpp:22,
from test/teststringgraph.cpp:18:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int>*, std::vector<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int> > >; _Distance = int; _Tp = std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int>*, std::vector<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/util/NumberSerialisation.hpp:28,
from ./libmaus2/dazzler/stringgraph/OverlapNode.hpp:21,
from ./libmaus2/dazzler/stringgraph/Edge.hpp:21,
from ./libmaus2/dazzler/stringgraph/StringGraph.hpp:21,
from test/teststringgraph.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::dazzler::stringgraph::OverlapNode}; _Tp = libmaus2::dazzler::stringgraph::OverlapNode; _Alloc = std::allocator<libmaus2::dazzler::stringgraph::OverlapNode>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::dazzler::stringgraph::OverlapNode>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::dazzler::db::FastaInfo}; _Tp = libmaus2::dazzler::db::FastaInfo; _Alloc = std::allocator<libmaus2::dazzler::db::FastaInfo>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::dazzler::db::FastaInfo>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbamgetrefreg.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::dazzler::stringgraph::Edge}; _Tp = libmaus2::dazzler::stringgraph::Edge; _Alloc = std::allocator<libmaus2::dazzler::stringgraph::Edge>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::dazzler::stringgraph::Edge>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbamgetrefreg.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int>}; _Tp = std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int>; _Alloc = std::allocator<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testlognormal-testlognormal.o `test -f 'test/testlognormal.cpp' || echo './'`test/testlognormal.cpp
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/dazzler/db/TrackAnno.hpp:22,
from ./libmaus2/dazzler/db/Track.hpp:21,
from ./libmaus2/dazzler/db/DatabaseFile.hpp:23,
from ./libmaus2/dazzler/stringgraph/StringGraph.hpp:22,
from test/teststringgraph.cpp:18:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int>*, std::vector<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int>*, std::vector<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int>*, std::vector<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int>*, std::vector<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int>*, std::vector<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/util/NumberSerialisation.hpp:28,
from ./libmaus2/dazzler/stringgraph/OverlapNode.hpp:21,
from ./libmaus2/dazzler/stringgraph/Edge.hpp:21,
from ./libmaus2/dazzler/stringgraph/StringGraph.hpp:21,
from test/teststringgraph.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::dazzler::stringgraph::StringGraph::StringGraph(std::istream&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::dazzler::stringgraph::OverlapNode*, std::vector<libmaus2::dazzler::stringgraph::OverlapNode> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::dazzler::stringgraph::Edge*, std::vector<libmaus2::dazzler::stringgraph::Edge> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int>*, std::vector<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int>*, std::vector<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/dazzler/db/TrackAnno.hpp:22,
from ./libmaus2/dazzler/db/Track.hpp:21,
from ./libmaus2/dazzler/db/DatabaseFile.hpp:23,
from ./libmaus2/dazzler/stringgraph/StringGraph.hpp:22,
from test/teststringgraph.cpp:18:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int>*, std::vector<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int>*, std::vector<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int>*, std::vector<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int>*, std::vector<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int>*, std::vector<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int>*, std::vector<std::pair<libmaus2::dazzler::stringgraph::OverlapNodeBase, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamgetrefreg.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from test/testlognormal.cpp:19:
./libmaus2/random/LogNormalRandom.hpp: In static member function ‘static std::pair<double, double> libmaus2::random::LogNormalRandom::estimateParameters(const std::vector<double>&)’:
./libmaus2/random/LogNormalRandom.hpp:132:4: note: parameter passing for argument of type ‘std::pair<double, double>’ when C++17 is enabled changed to match C++14 in GCC 10.1
132 | {
| ^
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamgetrefreg.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamgetrefreg.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/random/LogNormalRandom.hpp:25,
from test/testlognormal.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamgetrefreg.cpp:19:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:31,
from test/testbamgetrefreg.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamgetrefreg.cpp:20:
./libmaus2/trie/TrieState.hpp:768:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
768 | }
| ^
./libmaus2/trie/TrieState.hpp:768:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In function ‘int main()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testConstantSumCombinatorics-testConstantSumCombinatorics.o `test -f 'test/testConstantSumCombinatorics.cpp' || echo './'`test/testConstantSumCombinatorics.cpp
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamgetrefreg.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/util/NumberSerialisation.hpp:28,
from ./libmaus2/dazzler/stringgraph/OverlapNode.hpp:21,
from ./libmaus2/dazzler/stringgraph/Edge.hpp:21,
from ./libmaus2/dazzler/stringgraph/StringGraph.hpp:21,
from test/teststringgraph.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::dazzler::db::DatabaseFile::DatabaseFile(const string&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::dazzler::db::FastaInfo*, std::vector<libmaus2::dazzler::db::FastaInfo> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/util/NumberSerialisation.hpp:28,
from ./libmaus2/dazzler/stringgraph/OverlapNode.hpp:21,
from ./libmaus2/dazzler/stringgraph/Edge.hpp:21,
from ./libmaus2/dazzler/stringgraph/StringGraph.hpp:21,
from test/teststringgraph.cpp:18:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamgetrefreg.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testmatrix-testmatrix.o `test -f 'test/testmatrix.cpp' || echo './'`test/testmatrix.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testconvpowercache-testconvpowercache.o `test -f 'test/testconvpowercache.cpp' || echo './'`test/testconvpowercache.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testlassort-testlassort.o `test -f 'test/testlassort.cpp' || echo './'`test/testlassort.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testnnplocalaligner-testnnplocalaligner.o `test -f 'test/testnnplocalaligner.cpp' || echo './'`test/testnnplocalaligner.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::DecompressedPendingObject*, std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> > >; _Distance = int; _Tp = libmaus2::bambam::parallel::DecompressedPendingObject; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::parallel::DecompressedPendingObjectHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::DecompressedPendingObject*, std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
In file included from test/testconvpowercache.cpp:19:
./libmaus2/math/Convolution.hpp: In static member function ‘static void libmaus2::math::Convolution::fft(iterator, uint64_t, bool) [with iterator = __gnu_cxx::__normal_iterator<std::complex<double>*, std::vector<std::complex<double> > >]’:
./libmaus2/math/Convolution.hpp:90:16: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::complex<double>*, std::vector<std::complex<double> > >’ changed in GCC 7.1
90 | static void fft(iterator A, uint64_t const n, bool const reverse = false)
| ^~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::ReadEnds>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::ReadEnds> > >; _Distance = int; _Tp = std::pair<long long unsigned int, libmaus2::bambam::ReadEnds>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::ReadEndsHeapPairComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::ReadEnds>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::ReadEnds> > >’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testBamRawDecoder-testBamRawDecoder.o `test -f 'test/testBamRawDecoder.cpp' || echo './'`test/testBamRawDecoder.cpp
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::WritePendingObject*, std::vector<libmaus2::bambam::parallel::WritePendingObject> >; _Distance = int; _Tp = libmaus2::bambam::parallel::WritePendingObject; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::parallel::WritePendingObjectHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::WritePendingObject*, std::vector<libmaus2::bambam::parallel::WritePendingObject> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::GenericInputControlSubBlockPending*, std::vector<libmaus2::bambam::parallel::GenericInputControlSubBlockPending> >; _Distance = int; _Tp = libmaus2::bambam::parallel::GenericInputControlSubBlockPending; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::parallel::GenericInputControlSubBlockPendingHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::GenericInputControlSubBlockPending*, std::vector<libmaus2::bambam::parallel::GenericInputControlSubBlockPending> >’ changed in GCC 7.1
In file included from ./libmaus2/lcs/NPLinMem.hpp:22,
from ./libmaus2/lcs/NNPCor.hpp:24,
from ./libmaus2/lcs/NNPCorLocalAligner.hpp:21,
from test/testnnplocalaligner.cpp:22:
./libmaus2/lcs/NP.hpp: In instantiation of ‘int64_t libmaus2::lcs::NP::npTemplate(iter_a, iter_a, iter_b, iter_b) [with iter_a = const unsigned char*; iter_b = const unsigned char*; bool self_check = true; int64_t = long long int]’:
./libmaus2/lcs/NP.hpp:118:43: required from ‘int64_t libmaus2::lcs::NP::np(iter_a, iter_a, iter_b, iter_b, bool) [with iter_a = const unsigned char*; iter_b = const unsigned char*; int64_t = long long int]’
./libmaus2/lcs/NP.hpp:106:23: required from here
./libmaus2/lcs/NP.hpp:912:46: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare]
912 | if ( AlignmentTraceContainer::capacity() <= std::min(an,bn)+ed )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
./libmaus2/lcs/NP.hpp: In instantiation of ‘int64_t libmaus2::lcs::NP::npTemplate(iter_a, iter_a, iter_b, iter_b) [with iter_a = const unsigned char*; iter_b = const unsigned char*; bool self_check = false; int64_t = long long int]’:
./libmaus2/lcs/NP.hpp:120:44: required from ‘int64_t libmaus2::lcs::NP::np(iter_a, iter_a, iter_b, iter_b, bool) [with iter_a = const unsigned char*; iter_b = const unsigned char*; int64_t = long long int]’
./libmaus2/lcs/NP.hpp:106:23: required from here
./libmaus2/lcs/NP.hpp:912:46: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare]
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from test/testnnplocalaligner.cpp:22:
./libmaus2/lcs/NNPCorLocalAligner.hpp: In instantiation of ‘static libmaus2::lcs::NNPCorLocalAligner::NNPCorLocalAlignerKmer* libmaus2::lcs::NNPCorLocalAligner::extractKmers(iterator, iterator, libmaus2::lcs::NNPCorLocalAligner::NNPCorLocalAlignerKmer*, unsigned int, uint64_t, int64_t, int64_t) [with iterator = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >; uint64_t = long long unsigned int; int64_t = long long int]’:
./libmaus2/lcs/NNPCorLocalAligner.hpp:304:49: required from ‘static void libmaus2::lcs::NNPCorLocalAligner::extractKmers(iterator, iterator, int64_t, int64_t, iterator, iterator, int64_t, int64_t, unsigned int, uint64_t, libmaus2::autoarray::AutoArray<libmaus2::lcs::NNPCorLocalAligner::NNPCorLocalAlignerKmer>&, uint64_t, libmaus2::autoarray::AutoArray<long long unsigned int>&, uint64_t, libmaus2::lcs::NNPCorLocalAligner::NNPCorLocalAlignerKmerMatches*&) [with iterator = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >; int64_t = long long int; uint64_t = long long unsigned int]’
./libmaus2/lcs/NNPCorLocalAligner.hpp:865:17: required from ‘std::vector<std::pair<libmaus2::lcs::NNPAlignResult, std::shared_ptr<libmaus2::lcs::NNPTraceContainer> > > libmaus2::lcs::NNPCorLocalAligner::align(iterator, iterator, iterator, iterator, int64_t, int64_t, int64_t, int64_t) [with iterator = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >; int64_t = long long int]’
test/testnnplocalaligner.cpp:122:26: required from here
./libmaus2/lcs/NNPCorLocalAligner.hpp:227:16: warning: comparison of integer expressions of different signedness: ‘__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >::difference_type’ {aka ‘int’} and ‘const unsigned int’ [-Wsign-compare]
227 | if ( ae-aa >= anak )
| ~~~~~~^~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::math::IntegerInterval<long long int>&}; _Tp = libmaus2::math::IntegerInterval<long long int>; _Alloc = std::allocator<libmaus2::math::IntegerInterval<long long int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::math::IntegerInterval<long long int>, std::allocator<libmaus2::math::IntegerInterval<long long int> > >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::parallel::FragmentAlignmentBuffer::FragmentAlignmentBufferCopyRequest&}; _Tp = libmaus2::bambam::parallel::FragmentAlignmentBuffer::FragmentAlignmentBufferCopyRequest; _Alloc = std::allocator<libmaus2::bambam::parallel::FragmentAlignmentBuffer::FragmentAlignmentBufferCopyRequest>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::parallel::FragmentAlignmentBuffer::FragmentAlignmentBufferCopyRequest>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘std::vector<libmaus2::bambam::parallel::FragmentAlignmentBuffer::FragmentAlignmentBufferCopyRequest> libmaus2::bambam::parallel::FragmentAlignmentBuffer::setupCopy(libmaus2::bambam::parallel::FragmentAlignmentBuffer&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::FragmentAlignmentBuffer::FragmentAlignmentBufferCopyRequest*, std::vector<libmaus2::bambam::parallel::FragmentAlignmentBuffer::FragmentAlignmentBufferCopyRequest> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/util/ArgInfoParseBase.hpp:23,
from ./libmaus2/util/ArgParser.hpp:21,
from test/testlassort.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/util/ArgInfoParseBase.hpp:23,
from ./libmaus2/util/ArgParser.hpp:21,
from test/testlassort.cpp:18:
/usr/include/c++/10/bits/stl_vector.h: In function ‘uint64_t libmaus2::index::ExternalMemoryIndexGenerator<_data_type, _base_level_log, _inner_level_log>::flush() [with _data_type = libmaus2::dazzler::align::OverlapMeta; unsigned int _base_level_log = 8; unsigned int _inner_level_log = 3]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/util/ArgInfoParseBase.hpp:23,
from ./libmaus2/util/ArgParser.hpp:21,
from test/testlassort.cpp:18:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadEnds&}; _Tp = libmaus2::bambam::ReadEnds; _Alloc = std::allocator<libmaus2::bambam::ReadEnds>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadEnds>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadEnds>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::dazzler::align::LasSort2<>::BlockInfo}; _Tp = libmaus2::dazzler::align::LasSort2<>::BlockInfo; _Alloc = std::allocator<libmaus2::dazzler::align::LasSort2<>::BlockInfo>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::dazzler::align::LasSort2<>::BlockInfo, std::allocator<libmaus2::dazzler::align::LasSort2<>::BlockInfo> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/util/ArgParser.hpp:24,
from test/testBamRawDecoder.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/util/ArgParser.hpp:24,
from test/testBamRawDecoder.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/util/ArgInfoParseBase.hpp:23,
from ./libmaus2/util/ArgParser.hpp:21,
from test/testBamRawDecoder.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/util/ArgInfoParseBase.hpp:23,
from ./libmaus2/util/ArgParser.hpp:21,
from test/testnnplocalaligner.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/util/ArgInfoParseBase.hpp:23,
from ./libmaus2/util/ArgParser.hpp:21,
from test/testnnplocalaligner.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In function ‘uint64_t libmaus2::index::ExternalMemoryIndexGenerator<_data_type, _base_level_log, _inner_level_log>::flush() [with _data_type = libmaus2::dazzler::align::OverlapMeta; unsigned int _base_level_log = 8; unsigned int _inner_level_log = 3]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/util/ArgInfoParseBase.hpp:23,
from ./libmaus2/util/ArgParser.hpp:21,
from test/testnnplocalaligner.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::dazzler::db::FastaInfo}; _Tp = libmaus2::dazzler::db::FastaInfo; _Alloc = std::allocator<libmaus2::dazzler::db::FastaInfo>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::dazzler::db::FastaInfo>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamRawDecoder.hpp:21,
from test/testBamRawDecoder.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<libmaus2::lcs::NNPAlignResult, std::shared_ptr<libmaus2::lcs::NNPTraceContainer> >&}; _Tp = std::pair<libmaus2::lcs::NNPAlignResult, std::shared_ptr<libmaus2::lcs::NNPTraceContainer> >; _Alloc = std::allocator<std::pair<libmaus2::lcs::NNPAlignResult, std::shared_ptr<libmaus2::lcs::NNPTraceContainer> > >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<libmaus2::lcs::NNPAlignResult, std::shared_ptr<libmaus2::lcs::NNPTraceContainer> > >::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/util/ArgInfoParseBase.hpp:23,
from ./libmaus2/util/ArgParser.hpp:21,
from test/testBamRawDecoder.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘static int libmaus2::dazzler::align::LasSort2<comparator_type>::lassort2(const string&, const std::vector<std::__cxx11::basic_string<char> >&, uint64_t, uint64_t, const string&, bool, std::ostream*) [with comparator_type = libmaus2::dazzler::align::OverlapDataInterfaceFullComparator]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::dazzler::align::LasSort2<>::BlockInfo*, std::vector<libmaus2::dazzler::align::LasSort2<>::BlockInfo, std::allocator<libmaus2::dazzler::align::LasSort2<>::BlockInfo> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::dazzler::align::LasSort2<>::BlockInfo*, std::vector<libmaus2::dazzler::align::LasSort2<>::BlockInfo, std::allocator<libmaus2::dazzler::align::LasSort2<>::BlockInfo> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/util/ArgInfoParseBase.hpp:23,
from ./libmaus2/util/ArgParser.hpp:21,
from test/testBamRawDecoder.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/util/ArgInfoParseBase.hpp:23,
from ./libmaus2/util/ArgParser.hpp:21,
from test/testBamRawDecoder.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/util/ArgInfoParseBase.hpp:23,
from ./libmaus2/util/ArgParser.hpp:21,
from test/testBamRawDecoder.cpp:19:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/util/ArgParser.hpp:24,
from test/testBamRawDecoder.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from ./libmaus2/bambam/BamRawDecoder.hpp:21,
from test/testBamRawDecoder.cpp:20:
./libmaus2/trie/TrieState.hpp:768:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
768 | }
| ^
./libmaus2/trie/TrieState.hpp:768:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from ./libmaus2/dazzler/db/TrackAnno.hpp:22,
from ./libmaus2/dazzler/db/Track.hpp:21,
from ./libmaus2/dazzler/db/DatabaseFile.hpp:23,
from test/testnnplocalaligner.cpp:20:
./libmaus2/autoarray/AutoArray.hpp: In constructor ‘libmaus2::lcs::NNPCorLocalAligner::NNPCorLocalAligner(unsigned int, unsigned int, uint64_t, int64_t, int64_t, uint64_t, double, double, int64_t, bool, bool)’:
./libmaus2/autoarray/AutoArray.hpp:1132:5: warning: ‘<anonymous>’ may be used uninitialized in this function [-Wmaybe-uninitialized]
1132 | array[i] = N();
| ^~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamRawDecoder.hpp:21,
from test/testBamRawDecoder.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testpanic-testpanic.o `test -f 'test/testpanic.cpp' || echo './'`test/testpanic.cpp
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_erase_aux(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator) [with _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2510:5: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2510 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testavlset-testavlset.o `test -f 'test/testavlset.cpp' || echo './'`test/testavlset.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from test/testavlset.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from test/testavlset.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/set:61,
from test/testavlset.cpp:23:
/usr/include/c++/10/bits/stl_set.h: In constructor ‘std::set<_Key, _Compare, _Alloc>::set(_InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Key = long long unsigned int; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/stl_set.h:191:2: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
191 | set(_InputIterator __first, _InputIterator __last)
| ^~~
/usr/include/c++/10/bits/stl_set.h:191:2: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from /usr/include/c++/10/functional:62,
from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
from /usr/include/c++/10/algorithm:74,
from test/testavlset.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::avl::AVLSet<long long unsigned int>::AVLSetNode}; _Tp = libmaus2::avl::AVLSet<long long unsigned int>::AVLSetNode; _Alloc = std::allocator<libmaus2::avl::AVLSet<long long unsigned int>::AVLSetNode>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::avl::AVLSet<long long unsigned int>::AVLSetNode>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In function ‘bool libmaus2::avl::AVLSet<_value_type, _index_type, _order_type, container_type_template, freelist_type_template>::insert(const value_type&) [with _value_type = long long unsigned int; _index_type = unsigned int; _order_type = std::less<long long unsigned int>; container_type_template = std::vector; freelist_type_template = std::vector]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::avl::AVLSet<long long unsigned int>::AVLSetNode*, std::vector<libmaus2::avl::AVLSet<long long unsigned int>::AVLSetNode> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::avl::AVLSet<long long unsigned int>::AVLSetNode*, std::vector<libmaus2::avl::AVLSet<long long unsigned int>::AVLSetNode> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::avl::AVLSet<long long unsigned int>::AVLSetNode*, std::vector<libmaus2::avl::AVLSet<long long unsigned int>::AVLSetNode> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘int main()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::avl::AVLSet<long long unsigned int>::AVLSetNode*, std::vector<libmaus2::avl::AVLSet<long long unsigned int>::AVLSetNode> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from /usr/include/c++/10/functional:62,
from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
from /usr/include/c++/10/algorithm:74,
from test/testavlset.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
test/testavlset.cpp:50:44: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
50 | std::set<uint64_t> ST(VT.begin(),VT.end());
| ^
In file included from /usr/include/c++/10/vector:67,
from /usr/include/c++/10/functional:62,
from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
from /usr/include/c++/10/algorithm:74,
from test/testavlset.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from test/testavlset.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from /usr/include/c++/10/functional:62,
from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
from /usr/include/c++/10/algorithm:74,
from test/testavlset.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testlibcurl-testlibcurl.o `test -f 'test/testlibcurl.cpp' || echo './'`test/testlibcurl.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testRunLengthBitVector-testRunLengthBitVector.o `test -f 'test/testRunLengthBitVector.cpp' || echo './'`test/testRunLengthBitVector.cpp
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/util/ArgInfoParseBase.hpp:23,
from ./libmaus2/util/ArgParser.hpp:21,
from test/testnnplocalaligner.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘std::vector<std::pair<libmaus2::lcs::NNPAlignResult, std::shared_ptr<libmaus2::lcs::NNPTraceContainer> > > libmaus2::lcs::NNPCorLocalAligner::align(iterator, iterator, iterator, iterator, int64_t, int64_t, int64_t, int64_t) [with iterator = __gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char> >]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<libmaus2::lcs::NNPAlignResult, std::shared_ptr<libmaus2::lcs::NNPTraceContainer> >*, std::vector<std::pair<libmaus2::lcs::NNPAlignResult, std::shared_ptr<libmaus2::lcs::NNPTraceContainer> > > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testCopy-testCopy.o `test -f 'test/testCopy.cpp' || echo './'`test/testCopy.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/util/ArgInfoParseBase.hpp:23,
from ./libmaus2/util/ArgParser.hpp:21,
from test/testnnplocalaligner.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::dazzler::db::DatabaseFile::DatabaseFile(const string&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::dazzler::db::FastaInfo*, std::vector<libmaus2::dazzler::db::FastaInfo> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/util/ArgInfoParseBase.hpp:23,
from ./libmaus2/util/ArgParser.hpp:21,
from test/testnnplocalaligner.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -fopenmp -c -o libmaus2/bambam/scram_mod_la-Scram.lo `test -f 'libmaus2/bambam/Scram.c' || echo './'`libmaus2/bambam/Scram.c
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -fopenmp -c libmaus2/bambam/Scram.c -fPIC -DPIC -o libmaus2/bambam/.libs/scram_mod_la-Scram.o
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -fopenmp -c libmaus2/bambam/Scram.c -o libmaus2/bambam/scram_mod_la-Scram.o >/dev/null 2>&1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o test/testThreadPool-testThreadPool.o `test -f 'test/testThreadPool.cpp' || echo './'`test/testThreadPool.cpp
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/la-StaticInitialization.lo `test -f 'libmaus2/StaticInitialization.cpp' || echo './'`libmaus2/StaticInitialization.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/StaticInitialization.cpp -fPIC -DPIC -o libmaus2/.libs/la-StaticInitialization.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bitio/la-CompactArray.lo `test -f 'libmaus2/bitio/CompactArray.cpp' || echo './'`libmaus2/bitio/CompactArray.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bitio/CompactArray.cpp -fPIC -DPIC -o libmaus2/bitio/.libs/la-CompactArray.o
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:24,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy*, std::vector<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy*, std::vector<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy*, std::vector<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy> >’ changed in GCC 7.1
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bitio/CompactArray.cpp -o libmaus2/bitio/la-CompactArray.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/rank/la-RankTable.lo `test -f 'libmaus2/rank/RankTable.cpp' || echo './'`libmaus2/rank/RankTable.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/rank/RankTable.cpp -fPIC -DPIC -o libmaus2/rank/.libs/la-RankTable.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/rank/la-log2table.lo `test -f 'libmaus2/rank/log2table.cpp' || echo './'`libmaus2/rank/log2table.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/rank/log2table.cpp -fPIC -DPIC -o libmaus2/rank/.libs/la-log2table.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/rank/RankTable.cpp -o libmaus2/rank/la-RankTable.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/rank/log2table.cpp -o libmaus2/rank/la-log2table.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fastx/la-isFastQ.lo `test -f 'libmaus2/fastx/isFastQ.cpp' || echo './'`libmaus2/fastx/isFastQ.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/isFastQ.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-isFastQ.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/wavelet/la-toWaveletTreeBits.lo `test -f 'libmaus2/wavelet/toWaveletTreeBits.cpp' || echo './'`libmaus2/wavelet/toWaveletTreeBits.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/wavelet/toWaveletTreeBits.cpp -fPIC -DPIC -o libmaus2/wavelet/.libs/la-toWaveletTreeBits.o
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, libmaus2::bambam::ReadEnds>}; _Tp = std::pair<long long unsigned int, libmaus2::bambam::ReadEnds>; _Alloc = std::allocator<std::pair<long long unsigned int, libmaus2::bambam::ReadEnds> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, libmaus2::bambam::ReadEnds> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fastx/isFastQ.cpp -o libmaus2/fastx/la-isFastQ.o >/dev/null 2>&1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::ReadEnds>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::ReadEnds> > >; _Distance = int; _Tp = std::pair<long long unsigned int, libmaus2::bambam::ReadEnds>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadEndsHeapPairComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::ReadEnds>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::ReadEnds> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/suffixsort/la-divsufsort.lo `test -f 'libmaus2/suffixsort/divsufsort.cpp' || echo './'`libmaus2/suffixsort/divsufsort.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/divsufsort.cpp -fPIC -DPIC -o libmaus2/suffixsort/.libs/la-divsufsort.o
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/wavelet/toWaveletTreeBits.hpp:23,
from libmaus2/wavelet/toWaveletTreeBits.cpp:21:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::wavelet::CopyBackPacket&}; _Tp = libmaus2::wavelet::CopyBackPacket; _Alloc = std::allocator<libmaus2::wavelet::CopyBackPacket>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::wavelet::CopyBackPacket>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::wavelet::CopyBackPacket}; _Tp = libmaus2::wavelet::CopyBackPacket; _Alloc = std::allocator<libmaus2::wavelet::CopyBackPacket>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::wavelet::CopyBackPacket>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘std::pair<long long unsigned int, long long unsigned int> libmaus2::bambam::ReadEndsBlockIndexSet::merge(std::vector<std::pair<long long unsigned int, long long unsigned int> >, bool (*)(const libmaus2::bambam::ReadEndsBase&, const libmaus2::bambam::ReadEndsBase&), uint64_t (*)(const std::vector<libmaus2::bambam::ReadEnds>&, libmaus2::bambam::DupSetCallback&), libmaus2::bambam::DupSetCallback&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::ReadEnds>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::ReadEnds> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadEnds*, std::vector<libmaus2::bambam::ReadEnds> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::ReadEnds>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::ReadEnds> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/divsufsort.cpp -o libmaus2/suffixsort/la-divsufsort.o >/dev/null 2>&1
/usr/include/c++/10/bits/vector.tcc: In function ‘libmaus2::autoarray::AutoArray<long long unsigned int> libmaus2::wavelet::toWaveletTreeBitsParallel(libmaus2::bitio::CompactArray*, bool, uint64_t)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::wavelet::CopyBackPacket*, std::vector<libmaus2::wavelet::CopyBackPacket> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::wavelet::CopyBackPacket*, std::vector<libmaus2::wavelet::CopyBackPacket> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/wavelet/toWaveletTreeBits.hpp:23,
from libmaus2/wavelet/toWaveletTreeBits.cpp:21:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::wavelet::CopyBackPacket*, std::vector<libmaus2::wavelet::CopyBackPacket> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::wavelet::CopyBackPacket*, std::vector<libmaus2::wavelet::CopyBackPacket> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::wavelet::CopyBackPacket*, std::vector<libmaus2::wavelet::CopyBackPacket> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::wavelet::CopyBackPacket*, std::vector<libmaus2::wavelet::CopyBackPacket> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::wavelet::CopyBackPacket*, std::vector<libmaus2::wavelet::CopyBackPacket> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::wavelet::CopyBackPacket*, std::vector<libmaus2::wavelet::CopyBackPacket> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/wavelet/toWaveletTreeBits.hpp:23,
from libmaus2/wavelet/toWaveletTreeBits.cpp:21:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::wavelet::CopyBackPacket*, std::vector<libmaus2::wavelet::CopyBackPacket> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/wavelet/toWaveletTreeBits.hpp:23,
from libmaus2/wavelet/toWaveletTreeBits.cpp:21:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::wavelet::CopyBackPacket*, std::vector<libmaus2::wavelet::CopyBackPacket> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::wavelet::CopyBackPacket*, std::vector<libmaus2::wavelet::CopyBackPacket> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::wavelet::CopyBackPacket*, std::vector<libmaus2::wavelet::CopyBackPacket> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘std::pair<long long unsigned int, long long unsigned int> libmaus2::bambam::ReadEndsBlockIndexSet::mergePairs(std::vector<std::pair<long long unsigned int, long long unsigned int> >, bool (*)(const libmaus2::bambam::ReadEndsBase&, const libmaus2::bambam::ReadEndsBase&), uint64_t (*)(std::vector<libmaus2::bambam::ReadEnds>&, libmaus2::bambam::DupSetCallback&, unsigned int), libmaus2::bambam::DupSetCallback&, unsigned int)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::ReadEnds>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::ReadEnds> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadEnds*, std::vector<libmaus2::bambam::ReadEnds> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::ReadEnds>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::ReadEnds> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/digest/la-md5.lo `test -f 'libmaus2/digest/md5.cpp' || echo './'`libmaus2/digest/md5.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/md5.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-md5.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/digest/md5.cpp -o libmaus2/digest/la-md5.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/math/la-primes16.lo `test -f 'libmaus2/math/primes16.cpp' || echo './'`libmaus2/math/primes16.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/math/primes16.cpp -fPIC -DPIC -o libmaus2/math/.libs/la-primes16.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/math/primes16.cpp -o libmaus2/math/la-primes16.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/util/la-OutputFileNameTools.lo `test -f 'libmaus2/util/OutputFileNameTools.cpp' || echo './'`libmaus2/util/OutputFileNameTools.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/OutputFileNameTools.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-OutputFileNameTools.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/util/OutputFileNameTools.cpp -o libmaus2/util/la-OutputFileNameTools.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/wavelet/toWaveletTreeBits.cpp -o libmaus2/wavelet/la-toWaveletTreeBits.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/select/la-ESelectBase.lo `test -f 'libmaus2/select/ESelectBase.cpp' || echo './'`libmaus2/select/ESelectBase.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/select/ESelectBase.cpp -fPIC -DPIC -o libmaus2/select/.libs/la-ESelectBase.o
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::bambam::ProgramHeaderLineSet::ProgramHeaderLineSet(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/select/ESelectBase.cpp -o libmaus2/select/la-ESelectBase.o >/dev/null 2>&1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from libmaus2/StaticInitialization.cpp:81:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long int}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long int}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-CigarStringParser.lo `test -f 'libmaus2/bambam/CigarStringParser.cpp' || echo './'`libmaus2/bambam/CigarStringParser.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/CigarStringParser.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-CigarStringParser.o
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::parallel::RefIdInterval}; _Tp = libmaus2::bambam::parallel::RefIdInterval; _Alloc = std::allocator<libmaus2::bambam::parallel::RefIdInterval>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::parallel::RefIdInterval>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::parallel::RefIdInterval>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘virtual void libmaus2::bambam::parallel::GenericInputControlReorderWorkPackageDispatcher::dispatch(libmaus2::parallel::SimpleThreadWorkPackage*, libmaus2::parallel::SimpleThreadPoolInterfaceEnqueTermInterface&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::RefIdInterval*, std::vector<libmaus2::bambam::parallel::RefIdInterval> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::RefIdInterval*, std::vector<libmaus2::bambam::parallel::RefIdInterval> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lz/la-SnappyCompress.lo `test -f 'libmaus2/lz/SnappyCompress.cpp' || echo './'`libmaus2/lz/SnappyCompress.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lz/SnappyCompress.cpp -fPIC -DPIC -o libmaus2/lz/.libs/la-SnappyCompress.o
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::parallel::GenericInputControlStreamInfo}; _Tp = libmaus2::bambam::parallel::GenericInputControlStreamInfo; _Alloc = std::allocator<libmaus2::bambam::parallel::GenericInputControlStreamInfo>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::parallel::GenericInputControlStreamInfo>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/CigarStringParser.cpp -o libmaus2/bambam/la-CigarStringParser.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lz/SnappyCompress.cpp -o libmaus2/lz/la-SnappyCompress.o >/dev/null 2>&1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:24,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
./libmaus2/trie/TrieState.hpp:768:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
768 | }
| ^
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/StaticInitialization.cpp -o libmaus2/la-StaticInitialization.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-ReadEndsContainer.lo `test -f 'libmaus2/bambam/ReadEndsContainer.cpp' || echo './'`libmaus2/bambam/ReadEndsContainer.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/ReadEndsContainer.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-ReadEndsContainer.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/la-ReadEnds.lo `test -f 'libmaus2/bambam/ReadEnds.cpp' || echo './'`libmaus2/bambam/ReadEnds.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/ReadEnds.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-ReadEnds.o
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:24,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = std::__cxx11::basic_istringstream<char>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/ReadEnds.cpp -o libmaus2/bambam/la-ReadEnds.o >/dev/null 2>&1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::BamIndexGenerator::addBlock(const uint8_t*, uint64_t, uint64_t)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::math::IntegerInterval<long long int>*, std::vector<libmaus2::math::IntegerInterval<long long int>, std::allocator<libmaus2::math::IntegerInterval<long long int> > > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/ReadEndsContainer.cpp -o libmaus2/bambam/la-ReadEndsContainer.o >/dev/null 2>&1
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::BamHeaderLowMem::setupFromText()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:24,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
./libmaus2/hashing/ConstantStringHash.hpp:71:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy*, std::vector<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy> >’ changed in GCC 7.1
71 | unique_ptr_type u(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/parallel/GenericInputSingleDataBamParseInfo.hpp:23,
from ./libmaus2/bambam/parallel/GenericInputSingleData.hpp:30,
from ./libmaus2/bambam/parallel/GenericInputControlReadWorkPackage.hpp:22,
from ./libmaus2/bambam/parallel/GenericInputControlReadWorkPackageReturnInterface.hpp:22,
from ./libmaus2/bambam/parallel/GenericInputControlReadWorkPackageDispatcher.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:36,
from test/testparallelbamblocksort.cpp:19:
./libmaus2/bambam/BamHeaderLowMem.hpp:804:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
804 | }
| ^
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::ReadEndsContainer::flush()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadEnds*, std::vector<libmaus2::bambam::ReadEnds> >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<libmaus2::bambam::OpticalComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1819:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadEnds*, std::vector<libmaus2::bambam::ReadEnds> >’ changed in GCC 7.1
1819 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadEnds*, std::vector<libmaus2::bambam::ReadEnds> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::OpticalComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadEnds*, std::vector<libmaus2::bambam::ReadEnds> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadEnds*, std::vector<libmaus2::bambam::ReadEnds> >’ changed in GCC 7.1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/huffman/la-IndexLoaderBase.lo `test -f 'libmaus2/huffman/IndexLoaderBase.cpp' || echo './'`libmaus2/huffman/IndexLoaderBase.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/huffman/IndexLoaderBase.cpp -fPIC -DPIC -o libmaus2/huffman/.libs/la-IndexLoaderBase.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/huffman/la-KvInitResult.lo `test -f 'libmaus2/huffman/KvInitResult.cpp' || echo './'`libmaus2/huffman/KvInitResult.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/huffman/KvInitResult.cpp -fPIC -DPIC -o libmaus2/huffman/.libs/la-KvInitResult.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/huffman/KvInitResult.cpp -o libmaus2/huffman/la-KvInitResult.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/fm/la-MausFmToBwaConversion.lo `test -f 'libmaus2/fm/MausFmToBwaConversion.cpp' || echo './'`libmaus2/fm/MausFmToBwaConversion.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fm/MausFmToBwaConversion.cpp -fPIC -DPIC -o libmaus2/fm/.libs/la-MausFmToBwaConversion.o
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<libmaus2::bambam::parallel::GenericInputControlStreamInfo> libmaus2::bambam::parallel::BlockSortControl<_order_type, _create_dup_mark_info>::getBlockInfo() [with _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferQueryNameComparator; bool _create_dup_mark_info = false]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::GenericInputControlStreamInfo*, std::vector<libmaus2::bambam::parallel::GenericInputControlStreamInfo> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<libmaus2::bambam::parallel::GenericInputControlStreamInfo> libmaus2::bambam::parallel::BlockSortControl<_order_type, _create_dup_mark_info>::getBlockInfo() [with _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferPosComparator; bool _create_dup_mark_info = true]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::GenericInputControlStreamInfo*, std::vector<libmaus2::bambam::parallel::GenericInputControlStreamInfo> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::parallel::BlockSortControl<_order_type, _create_dup_mark_info>::addTempFile() [with _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferPosComparator; bool _create_dup_mark_info = true]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::parallel::BlockSortControl<_order_type, _create_dup_mark_info>::addTempFile() [with _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferQueryNameComparator; bool _create_dup_mark_info = false]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/suffixtree/la-CompressedSuffixTree.lo `test -f 'libmaus2/suffixtree/CompressedSuffixTree.cpp' || echo './'`libmaus2/suffixtree/CompressedSuffixTree.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixtree/CompressedSuffixTree.cpp -fPIC -DPIC -o libmaus2/suffixtree/.libs/la-CompressedSuffixTree.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/huffman/IndexLoaderBase.cpp -o libmaus2/huffman/la-IndexLoaderBase.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/gamma/la-SparseGammaGapFileIndexDecoderEntry.lo `test -f 'libmaus2/gamma/SparseGammaGapFileIndexDecoderEntry.cpp' || echo './'`libmaus2/gamma/SparseGammaGapFileIndexDecoderEntry.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/gamma/SparseGammaGapFileIndexDecoderEntry.cpp -fPIC -DPIC -o libmaus2/gamma/.libs/la-SparseGammaGapFileIndexDecoderEntry.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/gamma/SparseGammaGapFileIndexDecoderEntry.cpp -o libmaus2/gamma/la-SparseGammaGapFileIndexDecoderEntry.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/lcs/la-EditDistanceResult.lo `test -f 'libmaus2/lcs/EditDistanceResult.cpp' || echo './'`libmaus2/lcs/EditDistanceResult.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/EditDistanceResult.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-EditDistanceResult.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/lcs/EditDistanceResult.cpp -o libmaus2/lcs/la-EditDistanceResult.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixtree/CompressedSuffixTree.cpp -o libmaus2/suffixtree/la-CompressedSuffixTree.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/hashing/la-Crc32.lo `test -f 'libmaus2/hashing/Crc32.cpp' || echo './'`libmaus2/hashing/Crc32.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/hashing/Crc32.cpp -fPIC -DPIC -o libmaus2/hashing/.libs/la-Crc32.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/hashing/Crc32.cpp -o libmaus2/hashing/la-Crc32.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/hashing/la-MurmurHash3.lo `test -f 'libmaus2/hashing/MurmurHash3.cpp' || echo './'`libmaus2/hashing/MurmurHash3.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/hashing/MurmurHash3.cpp -fPIC -DPIC -o libmaus2/hashing/.libs/la-MurmurHash3.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/hashing/MurmurHash3.cpp -o libmaus2/hashing/la-MurmurHash3.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/trie/la-SimpleTrie.lo `test -f 'libmaus2/trie/SimpleTrie.cpp' || echo './'`libmaus2/trie/SimpleTrie.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/trie/SimpleTrie.cpp -fPIC -DPIC -o libmaus2/trie/.libs/la-SimpleTrie.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/trie/SimpleTrie.cpp -o libmaus2/trie/la-SimpleTrie.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/alignment/la-FactorMatchInfo.lo `test -f 'libmaus2/alignment/FactorMatchInfo.cpp' || echo './'`libmaus2/alignment/FactorMatchInfo.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/alignment/FactorMatchInfo.cpp -fPIC -DPIC -o libmaus2/alignment/.libs/la-FactorMatchInfo.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/alignment/FactorMatchInfo.cpp -o libmaus2/alignment/la-FactorMatchInfo.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/fm/MausFmToBwaConversion.cpp -o libmaus2/fm/la-MausFmToBwaConversion.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/alignment/la-KmerInfo.lo `test -f 'libmaus2/alignment/KmerInfo.cpp' || echo './'`libmaus2/alignment/KmerInfo.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/alignment/KmerInfo.cpp -fPIC -DPIC -o libmaus2/alignment/.libs/la-KmerInfo.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/alignment/KmerInfo.cpp -o libmaus2/alignment/la-KmerInfo.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/parallel/la-ValidationFragment.lo `test -f 'libmaus2/bambam/parallel/ValidationFragment.cpp' || echo './'`libmaus2/bambam/parallel/ValidationFragment.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/parallel/ValidationFragment.cpp -fPIC -DPIC -o libmaus2/bambam/parallel/.libs/la-ValidationFragment.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/bambam/parallel/la-GenericInputControlStreamInfo.lo `test -f 'libmaus2/bambam/parallel/GenericInputControlStreamInfo.cpp' || echo './'`libmaus2/bambam/parallel/GenericInputControlStreamInfo.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/parallel/GenericInputControlStreamInfo.cpp -fPIC -DPIC -o libmaus2/bambam/parallel/.libs/la-GenericInputControlStreamInfo.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/parallel/GenericInputControlStreamInfo.cpp -o libmaus2/bambam/parallel/la-GenericInputControlStreamInfo.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/dazzler/db/la-FastaInfo.lo `test -f 'libmaus2/dazzler/db/FastaInfo.cpp' || echo './'`libmaus2/dazzler/db/FastaInfo.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/db/FastaInfo.cpp -fPIC -DPIC -o libmaus2/dazzler/db/.libs/la-FastaInfo.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/db/FastaInfo.cpp -o libmaus2/dazzler/db/la-FastaInfo.o >/dev/null 2>&1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadEnds*, std::vector<libmaus2::bambam::ReadEnds> >; _Distance = int; _Tp = libmaus2::bambam::ReadEnds; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::OpticalComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadEnds*, std::vector<libmaus2::bambam::ReadEnds> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadEnds*, std::vector<libmaus2::bambam::ReadEnds> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::OpticalComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:339:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadEnds*, std::vector<libmaus2::bambam::ReadEnds> >’ changed in GCC 7.1
339 | __make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h:339:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadEnds*, std::vector<libmaus2::bambam::ReadEnds> >’ changed in GCC 7.1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/dazzler/db/la-IndexBase.lo `test -f 'libmaus2/dazzler/db/IndexBase.cpp' || echo './'`libmaus2/dazzler/db/IndexBase.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/db/IndexBase.cpp -fPIC -DPIC -o libmaus2/dazzler/db/.libs/la-IndexBase.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/bambam/parallel/ValidationFragment.cpp -o libmaus2/bambam/parallel/la-ValidationFragment.o >/dev/null 2>&1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadEnds*, std::vector<libmaus2::bambam::ReadEnds> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::OpticalComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadEnds*, std::vector<libmaus2::bambam::ReadEnds> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadEnds*, std::vector<libmaus2::bambam::ReadEnds> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadEnds*, std::vector<libmaus2::bambam::ReadEnds> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1666:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadEnds*, std::vector<libmaus2::bambam::ReadEnds> >’ changed in GCC 7.1
1666 | std::__make_heap(__first, __middle, __comp);
| ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In static member function ‘static uint64_t libmaus2::bambam::DupMarkBase::markDuplicatePairs(std::vector<libmaus2::bambam::ReadEnds>&, libmaus2::bambam::DupSetCallback&, unsigned int)’:
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadEnds*, std::vector<libmaus2::bambam::ReadEnds> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadEnds*, std::vector<libmaus2::bambam::ReadEnds> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadEnds*, std::vector<libmaus2::bambam::ReadEnds> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/db/IndexBase.cpp -o libmaus2/dazzler/db/la-IndexBase.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/dazzler/db/la-DatabaseFile.lo `test -f 'libmaus2/dazzler/db/DatabaseFile.cpp' || echo './'`libmaus2/dazzler/db/DatabaseFile.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/db/DatabaseFile.cpp -fPIC -DPIC -o libmaus2/dazzler/db/.libs/la-DatabaseFile.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/dazzler/db/la-Read.lo `test -f 'libmaus2/dazzler/db/Read.cpp' || echo './'`libmaus2/dazzler/db/Read.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/db/Read.cpp -fPIC -DPIC -o libmaus2/dazzler/db/.libs/la-Read.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/db/Read.cpp -o libmaus2/dazzler/db/la-Read.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/db/DatabaseFile.cpp -o libmaus2/dazzler/db/la-DatabaseFile.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/dazzler/align/la-Path.lo `test -f 'libmaus2/dazzler/align/Path.cpp' || echo './'`libmaus2/dazzler/align/Path.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/Path.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-Path.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/dazzler/align/la-Overlap.lo `test -f 'libmaus2/dazzler/align/Overlap.cpp' || echo './'`libmaus2/dazzler/align/Overlap.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/Overlap.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-Overlap.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/Path.cpp -o libmaus2/dazzler/align/la-Path.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/aio/la-InputStreamInstance.lo `test -f 'libmaus2/aio/InputStreamInstance.cpp' || echo './'`libmaus2/aio/InputStreamInstance.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/InputStreamInstance.cpp -fPIC -DPIC -o libmaus2/aio/.libs/la-InputStreamInstance.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/dazzler/align/Overlap.cpp -o libmaus2/dazzler/align/la-Overlap.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/aio/la-OutputStreamInstance.lo `test -f 'libmaus2/aio/OutputStreamInstance.cpp' || echo './'`libmaus2/aio/OutputStreamInstance.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/OutputStreamInstance.cpp -fPIC -DPIC -o libmaus2/aio/.libs/la-OutputStreamInstance.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/aio/la-OutputStreamFactoryContainer.lo `test -f 'libmaus2/aio/OutputStreamFactoryContainer.cpp' || echo './'`libmaus2/aio/OutputStreamFactoryContainer.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/OutputStreamFactoryContainer.cpp -fPIC -DPIC -o libmaus2/aio/.libs/la-OutputStreamFactoryContainer.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/OutputStreamFactoryContainer.cpp -o libmaus2/aio/la-OutputStreamFactoryContainer.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/InputStreamInstance.cpp -o libmaus2/aio/la-InputStreamInstance.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/aio/OutputStreamInstance.cpp -o libmaus2/aio/la-OutputStreamInstance.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/suffixsort/bwtb3m/la-MergeStrategyMergeGapRequest.lo `test -f 'libmaus2/suffixsort/bwtb3m/MergeStrategyMergeGapRequest.cpp' || echo './'`libmaus2/suffixsort/bwtb3m/MergeStrategyMergeGapRequest.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/MergeStrategyMergeGapRequest.cpp -fPIC -DPIC -o libmaus2/suffixsort/bwtb3m/.libs/la-MergeStrategyMergeGapRequest.o
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::parallel::GenericInputControlCompressionPending&}; _Tp = libmaus2::bambam::parallel::GenericInputControlCompressionPending; _Alloc = std::allocator<libmaus2::bambam::parallel::GenericInputControlCompressionPending>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::parallel::GenericInputControlCompressionPending>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_erase_aux(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator) [with _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2510:5: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > > >::const_iterator’ changed in GCC 7.1
2510 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::parallel::DecompressedPendingObject&}; _Tp = libmaus2::bambam::parallel::DecompressedPendingObject; _Alloc = std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::parallel::SmallLinearBlockCompressionPendingObject}; _Tp = libmaus2::bambam::parallel::SmallLinearBlockCompressionPendingObject; _Alloc = std::allocator<libmaus2::bambam::parallel::SmallLinearBlockCompressionPendingObject>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::parallel::SmallLinearBlockCompressionPendingObject>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::parallel::BlockSortControl<_order_type, _create_dup_mark_info>::bamHeaderComplete(const libmaus2::bambam::BamHeaderParserState&) [with _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferPosComparator; bool _create_dup_mark_info = true]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::SmallLinearBlockCompressionPendingObject*, std::vector<libmaus2::bambam::parallel::SmallLinearBlockCompressionPendingObject> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::parallel::BlockSortControl<_order_type, _create_dup_mark_info>::bamHeaderComplete(const libmaus2::bambam::BamHeaderParserState&) [with _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferQueryNameComparator; bool _create_dup_mark_info = false]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::SmallLinearBlockCompressionPendingObject*, std::vector<libmaus2::bambam::parallel::SmallLinearBlockCompressionPendingObject> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, bool>; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, bool> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, bool> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, bool>, std::_Select1st<std::pair<const long long unsigned int, bool> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, bool> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long unsigned int; _Tp = bool; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, bool> >]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, bool>, std::_Select1st<std::pair<const long long unsigned int, bool> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, bool> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::parallel::WritePendingObject}; _Tp = libmaus2::bambam::parallel::WritePendingObject; _Alloc = std::allocator<libmaus2::bambam::parallel::WritePendingObject>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::parallel::WritePendingObject>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::CramPassPointerObject> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::CramPassPointerObject> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::CramPassPointerObject> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::CramPassPointerObject> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::CramPassPointerObject> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::CramPassPointerObject> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<long long int&&>, std::tuple<>}; _Key = long long int; _Val = std::pair<const long long int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >; _KeyOfValue = std::_Select1st<std::pair<const long long int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >; _Compare = std::less<long long int>; _Alloc = std::allocator<std::pair<const long long int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >, std::_Select1st<std::pair<const long long int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >, std::less<long long int>, std::allocator<std::pair<const long long int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > > >::const_iterator’ changed in GCC 7.1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/MergeStrategyMergeGapRequest.cpp -o libmaus2/suffixsort/bwtb3m/la-MergeStrategyMergeGapRequest.o >/dev/null 2>&1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::parallel::GenericInputControlSubBlockPending}; _Tp = libmaus2::bambam::parallel::GenericInputControlSubBlockPending; _Alloc = std::allocator<libmaus2::bambam::parallel::GenericInputControlSubBlockPending>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::parallel::GenericInputControlSubBlockPending>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long unsigned int; _Tp = std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer>; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/suffixsort/bwtb3m/la-BwtMergeSort.lo `test -f 'libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp' || echo './'`libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp -fPIC -DPIC -o libmaus2/suffixsort/bwtb3m/.libs/la-BwtMergeSort.o
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::checkInputBlockPending(uint64_t) [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryCoordinate]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::GenericInputControlSubBlockPending*, std::vector<libmaus2::bambam::parallel::GenericInputControlSubBlockPending> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::checkInputBlockPending(uint64_t) [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryQueryName]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::GenericInputControlSubBlockPending*, std::vector<libmaus2::bambam::parallel::GenericInputControlSubBlockPending> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::checkRewritePendingQueue() [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryCoordinate]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::checkRewritePendingQueue() [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryQueryName]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/suffixsort/bwtb3m/la-BwtComputeSSA.lo `test -f 'libmaus2/suffixsort/bwtb3m/BwtComputeSSA.cpp' || echo './'`libmaus2/suffixsort/bwtb3m/BwtComputeSSA.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtComputeSSA.cpp -fPIC -DPIC -o libmaus2/suffixsort/bwtb3m/.libs/la-BwtComputeSSA.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/timing/la-RealTimeClock.lo `test -f 'libmaus2/timing/RealTimeClock.cpp' || echo './'`libmaus2/timing/RealTimeClock.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/timing/RealTimeClock.cpp -fPIC -DPIC -o libmaus2/timing/.libs/la-RealTimeClock.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/timing/RealTimeClock.cpp -o libmaus2/timing/la-RealTimeClock.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/gtf/la-CDS.lo `test -f 'libmaus2/gtf/CDS.cpp' || echo './'`libmaus2/gtf/CDS.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/gtf/CDS.cpp -fPIC -DPIC -o libmaus2/gtf/.libs/la-CDS.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/gtf/CDS.cpp -o libmaus2/gtf/la-CDS.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/gtf/la-Exon.lo `test -f 'libmaus2/gtf/Exon.cpp' || echo './'`libmaus2/gtf/Exon.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/gtf/Exon.cpp -fPIC -DPIC -o libmaus2/gtf/.libs/la-Exon.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/gtf/Exon.cpp -o libmaus2/gtf/la-Exon.o >/dev/null 2>&1
In file included from /usr/include/c++/10/cassert:44,
from ./libmaus2/suffixsort/divsufsort.hpp:32,
from ./libmaus2/util/Utf8String.hpp:27,
from ./libmaus2/wavelet/Utf8ToImpCompactHuffmanWaveletTree.hpp:26,
from ./libmaus2/wavelet/RlToHwtBase.hpp:30,
from ./libmaus2/wavelet/RlToHwtTermRequest.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:37,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtSmallAlphabet(const string&, const libmaus2::huffman::HuffmanTree&, uint64_t) [with entity_type = unsigned char; bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1404:105: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwt(const string&, const string&, std::string, uint64_t) [with bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:5210:65: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeBwt(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:27:122: required from ‘libmaus2::suffixsort::bwtb3m::BwtMergeSortResult computeBwtTemplate(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with unsigned int wordsize = 32; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:71:47: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:812:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
812 | assert ( symtonodesp-symtonodes.begin() == symtonodevecoffsets[sym] );
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtSmallAlphabet(const string&, const libmaus2::huffman::HuffmanTree&, uint64_t) [with entity_type = short unsigned int; bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1413:106: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwt(const string&, const string&, std::string, uint64_t) [with bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:5210:65: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeBwt(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:27:122: required from ‘libmaus2::suffixsort::bwtb3m::BwtMergeSortResult computeBwtTemplate(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with unsigned int wordsize = 32; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:71:47: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:812:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtSmallAlphabet(const string&, const libmaus2::huffman::HuffmanTree&, uint64_t) [with entity_type = unsigned int; bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1422:106: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwt(const string&, const string&, std::string, uint64_t) [with bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:5210:65: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeBwt(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:27:122: required from ‘libmaus2::suffixsort::bwtb3m::BwtMergeSortResult computeBwtTemplate(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with unsigned int wordsize = 32; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:71:47: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:812:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtSmallAlphabet(const string&, const libmaus2::huffman::HuffmanTree&, uint64_t) [with entity_type = long long unsigned int; bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1431:106: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwt(const string&, const string&, std::string, uint64_t) [with bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:5210:65: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeBwt(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:27:122: required from ‘libmaus2::suffixsort::bwtb3m::BwtMergeSortResult computeBwtTemplate(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with unsigned int wordsize = 32; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:71:47: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:812:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtSmallAlphabet(const string&, const libmaus2::huffman::HuffmanTree&, uint64_t) [with entity_type = unsigned char; bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1404:105: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwt(const string&, const string&, std::string, uint64_t) [with bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:5217:66: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeBwt(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:27:122: required from ‘libmaus2::suffixsort::bwtb3m::BwtMergeSortResult computeBwtTemplate(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with unsigned int wordsize = 32; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:71:47: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:812:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtSmallAlphabet(const string&, const libmaus2::huffman::HuffmanTree&, uint64_t) [with entity_type = short unsigned int; bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1413:106: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwt(const string&, const string&, std::string, uint64_t) [with bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:5217:66: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeBwt(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:27:122: required from ‘libmaus2::suffixsort::bwtb3m::BwtMergeSortResult computeBwtTemplate(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with unsigned int wordsize = 32; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:71:47: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:812:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtSmallAlphabet(const string&, const libmaus2::huffman::HuffmanTree&, uint64_t) [with entity_type = unsigned int; bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1422:106: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwt(const string&, const string&, std::string, uint64_t) [with bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:5217:66: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeBwt(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:27:122: required from ‘libmaus2::suffixsort::bwtb3m::BwtMergeSortResult computeBwtTemplate(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with unsigned int wordsize = 32; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:71:47: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:812:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtSmallAlphabet(const string&, const libmaus2::huffman::HuffmanTree&, uint64_t) [with entity_type = long long unsigned int; bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1431:106: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwt(const string&, const string&, std::string, uint64_t) [with bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:5217:66: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeBwt(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:27:122: required from ‘libmaus2::suffixsort::bwtb3m::BwtMergeSortResult computeBwtTemplate(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with unsigned int wordsize = 32; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:71:47: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:812:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtTermSmallAlphabet(const std::vector<std::__cxx11::basic_string<char> >&, const string&, uint64_t, uint64_t, uint64_t) [with entity_type = unsigned char; bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1662:111: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtTerm(const std::vector<std::__cxx11::basic_string<char> >&, const string&, std::string, std::string, uint64_t, uint64_t, uint64_t) [with bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
./libmaus2/wavelet/RlToHwtTermRequest.hpp:118:67: required from ‘libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtTermRequest::dispatch() [with rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:1287:102: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::ensureWaveletTreeGenerated(const libmaus2::suffixsort::BwtMergeBlockSortResult&, std::ostream*) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:1353:105: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::GapArrayComputationResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeGapArray(libmaus2::util::TempFileNameGenerator&, const string&, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t, const libmaus2::suffixsort::BwtMergeBlockSortResult&, const std::vector<std::__cxx11::basic_string<char> >&, libmaus2::lf::DArray*, const std::vector<libmaus2::suffixsort::BwtMergeZBlock>&, uint64_t, std::ostream*, int) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:1520:28: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::GapArrayComputationResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeGapArray(libmaus2::util::TempFileNameGenerator&, const string&, uint64_t, const libmaus2::suffixsort::bwtb3m::MergeStrategyMergeGapRequest&, const std::vector<std::__cxx11::basic_string<char> >&, libmaus2::lf::DArray*, uint64_t, std::ostream*, int) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:2320:61: required from ‘static void libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::mergeBlocks(libmaus2::util::TempFileNameGenerator&, libmaus2::suffixsort::bwtb3m::MergeStrategyMergeInternalBlock&, std::string, uint64_t, uint64_t, uint64_t, uint64_t, const std::map<long long int, long long unsigned int>&, uint64_t, const string&, std::ostream*, int) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:5070:19: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeBwt(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:27:122: required from ‘libmaus2::suffixsort::bwtb3m::BwtMergeSortResult computeBwtTemplate(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with unsigned int wordsize = 32; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:71:47: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:234:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
234 | assert ( symtonodesp-symtonodes.begin() == symtonodevecoffsets[sym] );
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtTermSmallAlphabet(const std::vector<std::__cxx11::basic_string<char> >&, const string&, uint64_t, uint64_t, uint64_t) [with entity_type = short unsigned int; bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1668:112: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtTerm(const std::vector<std::__cxx11::basic_string<char> >&, const string&, std::string, std::string, uint64_t, uint64_t, uint64_t) [with bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
./libmaus2/wavelet/RlToHwtTermRequest.hpp:118:67: required from ‘libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtTermRequest::dispatch() [with rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:1287:102: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::ensureWaveletTreeGenerated(const libmaus2::suffixsort::BwtMergeBlockSortResult&, std::ostream*) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:1353:105: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::GapArrayComputationResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeGapArray(libmaus2::util::TempFileNameGenerator&, const string&, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t, const libmaus2::suffixsort::BwtMergeBlockSortResult&, const std::vector<std::__cxx11::basic_string<char> >&, libmaus2::lf::DArray*, const std::vector<libmaus2::suffixsort::BwtMergeZBlock>&, uint64_t, std::ostream*, int) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:1520:28: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::GapArrayComputationResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeGapArray(libmaus2::util::TempFileNameGenerator&, const string&, uint64_t, const libmaus2::suffixsort::bwtb3m::MergeStrategyMergeGapRequest&, const std::vector<std::__cxx11::basic_string<char> >&, libmaus2::lf::DArray*, uint64_t, std::ostream*, int) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:2320:61: required from ‘static void libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::mergeBlocks(libmaus2::util::TempFileNameGenerator&, libmaus2::suffixsort::bwtb3m::MergeStrategyMergeInternalBlock&, std::string, uint64_t, uint64_t, uint64_t, uint64_t, const std::map<long long int, long long unsigned int>&, uint64_t, const string&, std::ostream*, int) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:5070:19: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeBwt(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:27:122: required from ‘libmaus2::suffixsort::bwtb3m::BwtMergeSortResult computeBwtTemplate(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with unsigned int wordsize = 32; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:71:47: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:234:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtTermSmallAlphabet(const std::vector<std::__cxx11::basic_string<char> >&, const string&, uint64_t, uint64_t, uint64_t) [with entity_type = unsigned int; bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1674:112: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtTerm(const std::vector<std::__cxx11::basic_string<char> >&, const string&, std::string, std::string, uint64_t, uint64_t, uint64_t) [with bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
./libmaus2/wavelet/RlToHwtTermRequest.hpp:118:67: required from ‘libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtTermRequest::dispatch() [with rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:1287:102: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::ensureWaveletTreeGenerated(const libmaus2::suffixsort::BwtMergeBlockSortResult&, std::ostream*) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:1353:105: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::GapArrayComputationResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeGapArray(libmaus2::util::TempFileNameGenerator&, const string&, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t, const libmaus2::suffixsort::BwtMergeBlockSortResult&, const std::vector<std::__cxx11::basic_string<char> >&, libmaus2::lf::DArray*, const std::vector<libmaus2::suffixsort::BwtMergeZBlock>&, uint64_t, std::ostream*, int) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:1520:28: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::GapArrayComputationResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeGapArray(libmaus2::util::TempFileNameGenerator&, const string&, uint64_t, const libmaus2::suffixsort::bwtb3m::MergeStrategyMergeGapRequest&, const std::vector<std::__cxx11::basic_string<char> >&, libmaus2::lf::DArray*, uint64_t, std::ostream*, int) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:2320:61: required from ‘static void libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::mergeBlocks(libmaus2::util::TempFileNameGenerator&, libmaus2::suffixsort::bwtb3m::MergeStrategyMergeInternalBlock&, std::string, uint64_t, uint64_t, uint64_t, uint64_t, const std::map<long long int, long long unsigned int>&, uint64_t, const string&, std::ostream*, int) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:5070:19: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeBwt(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:27:122: required from ‘libmaus2::suffixsort::bwtb3m::BwtMergeSortResult computeBwtTemplate(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with unsigned int wordsize = 32; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:71:47: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:234:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtTermSmallAlphabet(const std::vector<std::__cxx11::basic_string<char> >&, const string&, uint64_t, uint64_t, uint64_t) [with entity_type = long long unsigned int; bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1680:112: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtTerm(const std::vector<std::__cxx11::basic_string<char> >&, const string&, std::string, std::string, uint64_t, uint64_t, uint64_t) [with bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
./libmaus2/wavelet/RlToHwtTermRequest.hpp:118:67: required from ‘libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtTermRequest::dispatch() [with rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:1287:102: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::ensureWaveletTreeGenerated(const libmaus2::suffixsort::BwtMergeBlockSortResult&, std::ostream*) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:1353:105: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::GapArrayComputationResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeGapArray(libmaus2::util::TempFileNameGenerator&, const string&, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t, const libmaus2::suffixsort::BwtMergeBlockSortResult&, const std::vector<std::__cxx11::basic_string<char> >&, libmaus2::lf::DArray*, const std::vector<libmaus2::suffixsort::BwtMergeZBlock>&, uint64_t, std::ostream*, int) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:1520:28: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::GapArrayComputationResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeGapArray(libmaus2::util::TempFileNameGenerator&, const string&, uint64_t, const libmaus2::suffixsort::bwtb3m::MergeStrategyMergeGapRequest&, const std::vector<std::__cxx11::basic_string<char> >&, libmaus2::lf::DArray*, uint64_t, std::ostream*, int) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:2320:61: required from ‘static void libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::mergeBlocks(libmaus2::util::TempFileNameGenerator&, libmaus2::suffixsort::bwtb3m::MergeStrategyMergeInternalBlock&, std::string, uint64_t, uint64_t, uint64_t, uint64_t, const std::map<long long int, long long unsigned int>&, uint64_t, const string&, std::ostream*, int) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:5070:19: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeBwt(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:27:122: required from ‘libmaus2::suffixsort::bwtb3m::BwtMergeSortResult computeBwtTemplate(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with unsigned int wordsize = 32; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:71:47: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:234:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtTermSmallAlphabet(const std::vector<std::__cxx11::basic_string<char> >&, const string&, uint64_t, uint64_t, uint64_t) [with entity_type = unsigned char; bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1662:111: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtTerm(const std::vector<std::__cxx11::basic_string<char> >&, const string&, std::string, std::string, uint64_t, uint64_t, uint64_t) [with bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
./libmaus2/wavelet/RlToHwtTermRequest.hpp:125:68: required from ‘libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtTermRequest::dispatch() [with rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:1287:102: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::ensureWaveletTreeGenerated(const libmaus2::suffixsort::BwtMergeBlockSortResult&, std::ostream*) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:1353:105: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::GapArrayComputationResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeGapArray(libmaus2::util::TempFileNameGenerator&, const string&, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t, const libmaus2::suffixsort::BwtMergeBlockSortResult&, const std::vector<std::__cxx11::basic_string<char> >&, libmaus2::lf::DArray*, const std::vector<libmaus2::suffixsort::BwtMergeZBlock>&, uint64_t, std::ostream*, int) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:1520:28: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::GapArrayComputationResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeGapArray(libmaus2::util::TempFileNameGenerator&, const string&, uint64_t, const libmaus2::suffixsort::bwtb3m::MergeStrategyMergeGapRequest&, const std::vector<std::__cxx11::basic_string<char> >&, libmaus2::lf::DArray*, uint64_t, std::ostream*, int) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:2320:61: required from ‘static void libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::mergeBlocks(libmaus2::util::TempFileNameGenerator&, libmaus2::suffixsort::bwtb3m::MergeStrategyMergeInternalBlock&, std::string, uint64_t, uint64_t, uint64_t, uint64_t, const std::map<long long int, long long unsigned int>&, uint64_t, const string&, std::ostream*, int) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:5070:19: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeBwt(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:27:122: required from ‘libmaus2::suffixsort::bwtb3m::BwtMergeSortResult computeBwtTemplate(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with unsigned int wordsize = 32; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:71:47: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:234:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtTermSmallAlphabet(const std::vector<std::__cxx11::basic_string<char> >&, const string&, uint64_t, uint64_t, uint64_t) [with entity_type = short unsigned int; bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1668:112: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtTerm(const std::vector<std::__cxx11::basic_string<char> >&, const string&, std::string, std::string, uint64_t, uint64_t, uint64_t) [with bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
./libmaus2/wavelet/RlToHwtTermRequest.hpp:125:68: required from ‘libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtTermRequest::dispatch() [with rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:1287:102: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::ensureWaveletTreeGenerated(const libmaus2::suffixsort::BwtMergeBlockSortResult&, std::ostream*) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:1353:105: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::GapArrayComputationResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeGapArray(libmaus2::util::TempFileNameGenerator&, const string&, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t, const libmaus2::suffixsort::BwtMergeBlockSortResult&, const std::vector<std::__cxx11::basic_string<char> >&, libmaus2::lf::DArray*, const std::vector<libmaus2::suffixsort::BwtMergeZBlock>&, uint64_t, std::ostream*, int) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:1520:28: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::GapArrayComputationResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeGapArray(libmaus2::util::TempFileNameGenerator&, const string&, uint64_t, const libmaus2::suffixsort::bwtb3m::MergeStrategyMergeGapRequest&, const std::vector<std::__cxx11::basic_string<char> >&, libmaus2::lf::DArray*, uint64_t, std::ostream*, int) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:2320:61: required from ‘static void libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::mergeBlocks(libmaus2::util::TempFileNameGenerator&, libmaus2::suffixsort::bwtb3m::MergeStrategyMergeInternalBlock&, std::string, uint64_t, uint64_t, uint64_t, uint64_t, const std::map<long long int, long long unsigned int>&, uint64_t, const string&, std::ostream*, int) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:5070:19: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeBwt(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:27:122: required from ‘libmaus2::suffixsort::bwtb3m::BwtMergeSortResult computeBwtTemplate(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with unsigned int wordsize = 32; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:71:47: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:234:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtTermSmallAlphabet(const std::vector<std::__cxx11::basic_string<char> >&, const string&, uint64_t, uint64_t, uint64_t) [with entity_type = unsigned int; bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1674:112: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtTerm(const std::vector<std::__cxx11::basic_string<char> >&, const string&, std::string, std::string, uint64_t, uint64_t, uint64_t) [with bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
./libmaus2/wavelet/RlToHwtTermRequest.hpp:125:68: required from ‘libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtTermRequest::dispatch() [with rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:1287:102: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::ensureWaveletTreeGenerated(const libmaus2::suffixsort::BwtMergeBlockSortResult&, std::ostream*) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:1353:105: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::GapArrayComputationResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeGapArray(libmaus2::util::TempFileNameGenerator&, const string&, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t, const libmaus2::suffixsort::BwtMergeBlockSortResult&, const std::vector<std::__cxx11::basic_string<char> >&, libmaus2::lf::DArray*, const std::vector<libmaus2::suffixsort::BwtMergeZBlock>&, uint64_t, std::ostream*, int) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:1520:28: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::GapArrayComputationResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeGapArray(libmaus2::util::TempFileNameGenerator&, const string&, uint64_t, const libmaus2::suffixsort::bwtb3m::MergeStrategyMergeGapRequest&, const std::vector<std::__cxx11::basic_string<char> >&, libmaus2::lf::DArray*, uint64_t, std::ostream*, int) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:2320:61: required from ‘static void libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::mergeBlocks(libmaus2::util::TempFileNameGenerator&, libmaus2::suffixsort::bwtb3m::MergeStrategyMergeInternalBlock&, std::string, uint64_t, uint64_t, uint64_t, uint64_t, const std::map<long long int, long long unsigned int>&, uint64_t, const string&, std::ostream*, int) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:5070:19: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeBwt(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:27:122: required from ‘libmaus2::suffixsort::bwtb3m::BwtMergeSortResult computeBwtTemplate(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with unsigned int wordsize = 32; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:71:47: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:234:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtTermSmallAlphabet(const std::vector<std::__cxx11::basic_string<char> >&, const string&, uint64_t, uint64_t, uint64_t) [with entity_type = long long unsigned int; bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1680:112: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtTerm(const std::vector<std::__cxx11::basic_string<char> >&, const string&, std::string, std::string, uint64_t, uint64_t, uint64_t) [with bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
./libmaus2/wavelet/RlToHwtTermRequest.hpp:125:68: required from ‘libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtTermRequest::dispatch() [with rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:1287:102: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::ensureWaveletTreeGenerated(const libmaus2::suffixsort::BwtMergeBlockSortResult&, std::ostream*) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:1353:105: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::GapArrayComputationResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeGapArray(libmaus2::util::TempFileNameGenerator&, const string&, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t, const libmaus2::suffixsort::BwtMergeBlockSortResult&, const std::vector<std::__cxx11::basic_string<char> >&, libmaus2::lf::DArray*, const std::vector<libmaus2::suffixsort::BwtMergeZBlock>&, uint64_t, std::ostream*, int) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:1520:28: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::GapArrayComputationResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeGapArray(libmaus2::util::TempFileNameGenerator&, const string&, uint64_t, const libmaus2::suffixsort::bwtb3m::MergeStrategyMergeGapRequest&, const std::vector<std::__cxx11::basic_string<char> >&, libmaus2::lf::DArray*, uint64_t, std::ostream*, int) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:2320:61: required from ‘static void libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::mergeBlocks(libmaus2::util::TempFileNameGenerator&, libmaus2::suffixsort::bwtb3m::MergeStrategyMergeInternalBlock&, std::string, uint64_t, uint64_t, uint64_t, uint64_t, const std::map<long long int, long long unsigned int>&, uint64_t, const string&, std::ostream*, int) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:5070:19: required from ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeBwt(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:27:122: required from ‘libmaus2::suffixsort::bwtb3m::BwtMergeSortResult computeBwtTemplate(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with unsigned int wordsize = 32; std::ostream = std::basic_ostream<char>]’
libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:71:47: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:234:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/gtf/la-ExonInfo.lo `test -f 'libmaus2/gtf/ExonInfo.cpp' || echo './'`libmaus2/gtf/ExonInfo.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtComputeSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtComputeSSA.cpp:18:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<QueueElement*, std::vector<QueueElement, std::allocator<QueueElement> > >; _Distance = int; _Tp = QueueElement; _Compare = __gnu_cxx::__ops::_Iter_comp_val<std::less<QueueElement> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<QueueElement*, std::vector<QueueElement, std::allocator<QueueElement> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, IsaTriple>*, std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, IsaTriple>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::sorting::MergingReadBack<IsaTriple, std::less<IsaTriple> >::HeapOrderAdapter>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, IsaTriple>*, std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > > >’ changed in GCC 7.1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/gtf/ExonInfo.cpp -fPIC -DPIC -o libmaus2/gtf/.libs/la-ExonInfo.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/gtf/ExonInfo.cpp -o libmaus2/gtf/la-ExonInfo.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/gtf/la-ExonInterval.lo `test -f 'libmaus2/gtf/ExonInterval.cpp' || echo './'`libmaus2/gtf/ExonInterval.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/gtf/ExonInterval.cpp -fPIC -DPIC -o libmaus2/gtf/.libs/la-ExonInterval.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/gtf/ExonInterval.cpp -o libmaus2/gtf/la-ExonInterval.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/gtf/la-ExonSubInfo.lo `test -f 'libmaus2/gtf/ExonSubInfo.cpp' || echo './'`libmaus2/gtf/ExonSubInfo.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/gtf/ExonSubInfo.cpp -fPIC -DPIC -o libmaus2/gtf/.libs/la-ExonSubInfo.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/gtf/ExonSubInfo.cpp -o libmaus2/gtf/la-ExonSubInfo.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/protein/la-Blosum62.lo `test -f 'libmaus2/protein/Blosum62.cpp' || echo './'`libmaus2/protein/Blosum62.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/protein/Blosum62.cpp -fPIC -DPIC -o libmaus2/protein/.libs/la-Blosum62.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/protein/Blosum62.cpp -o libmaus2/protein/la-Blosum62.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/protein/la-CodonMapper.lo `test -f 'libmaus2/protein/CodonMapper.cpp' || echo './'`libmaus2/protein/CodonMapper.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/protein/CodonMapper.cpp -fPIC -DPIC -o libmaus2/protein/.libs/la-CodonMapper.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/protein/CodonMapper.cpp -o libmaus2/protein/la-CodonMapper.o >/dev/null 2>&1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtComputeSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtComputeSSA.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {QueueElement}; _Tp = QueueElement; _Alloc = std::allocator<QueueElement>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<QueueElement, std::allocator<QueueElement> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/vcf/la-VCFSortEntry.lo `test -f 'libmaus2/vcf/VCFSortEntry.cpp' || echo './'`libmaus2/vcf/VCFSortEntry.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/vcf/VCFSortEntry.cpp -fPIC -DPIC -o libmaus2/vcf/.libs/la-VCFSortEntry.o
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtComputeSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtComputeSSA.cpp:18:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, IsaTriple>*, std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, IsaTriple>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::sorting::MergingReadBack<IsaTriple, std::less<IsaTriple> >::HeapOrderAdapter>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, IsaTriple>*, std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtComputeSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtComputeSSA.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, IsaTriple>}; _Tp = std::pair<long long unsigned int, IsaTriple>; _Alloc = std::allocator<std::pair<long long unsigned int, IsaTriple> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::sorting::MergingReadBack<_data_type, _order_type>::MergingReadBack(const string&, const std::vector<long long unsigned int>&, uint64_t, uint64_t) [with _data_type = IsaTriple; _order_type = std::less<IsaTriple>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, IsaTriple>*, std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, std::less<std::pair<long long unsigned int, long long unsigned int> >, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>}; _Tp = libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, std::less<std::pair<long long unsigned int, long long unsigned int> >, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>; _Alloc = std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, std::less<std::pair<long long unsigned int, long long unsigned int> >, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, std::less<std::pair<long long unsigned int, long long unsigned int> >, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, std::less<std::pair<long long unsigned int, long long unsigned int> >, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘static void libmaus2::sorting::InPlaceParallelSort::mergestepRecLevel(iterator, uint64_t, uint64_t, order_type, base_sort&, int, int, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<iterator, order_type, base_sort> >&, uint64_t) [with iterator = std::pair<long long unsigned int, long long unsigned int>*; order_type = std::less<std::pair<long long unsigned int, long long unsigned int> >; base_sort = libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, std::less<std::pair<long long unsigned int, long long unsigned int> >, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, std::less<std::pair<long long unsigned int, long long unsigned int> >, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, std::less<std::pair<long long unsigned int, long long unsigned int> >, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static void libmaus2::sorting::SemiExternalKeyTupleSort::sort(std::vector<std::__cxx11::basic_string<char> >, const string&, std::ostream&, uint64_t, uint64_t, uint64_t, uint64_t, bool) [with data_type = std::pair<long long unsigned int, long long unsigned int>; key_projector_type = PairFirstProjectorType<long long unsigned int, long long unsigned int>; output_data_type = long long unsigned int; output_projector_type = PairSecondProjectorType<long long unsigned int, long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, std::less<std::pair<long long unsigned int, long long unsigned int> >, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, std::less<std::pair<long long unsigned int, long long unsigned int> >, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, std::less<std::pair<long long unsigned int, long long unsigned int> >, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/vcf/VCFSortEntry.cpp -o libmaus2/vcf/la-VCFSortEntry.o >/dev/null 2>&1
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static void libmaus2::suffixsort::bwtb3m::BwtComputeSSA::computeSSA(std::string, uint64_t, uint64_t, std::string, bool, uint64_t, uint64_t, uint64_t, std::ostream*, std::string, std::string)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<QueueElement*, std::vector<QueueElement, std::allocator<QueueElement> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<QueueElement*, std::vector<QueueElement, std::allocator<QueueElement> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/network/la-CurlInitObject.lo `test -f 'libmaus2/network/CurlInitObject.cpp' || echo './'`libmaus2/network/CurlInitObject.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/network/CurlInitObject.cpp -fPIC -DPIC -o libmaus2/network/.libs/la-CurlInitObject.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/network/CurlInitObject.cpp -o libmaus2/network/la-CurlInitObject.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/network/la-CurlOutputBlock.lo `test -f 'libmaus2/network/CurlOutputBlock.cpp' || echo './'`libmaus2/network/CurlOutputBlock.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/network/CurlOutputBlock.cpp -fPIC -DPIC -o libmaus2/network/.libs/la-CurlOutputBlock.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/network/CurlOutputBlock.cpp -o libmaus2/network/la-CurlOutputBlock.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/network/la-CurlResponseAcceptor.lo `test -f 'libmaus2/network/CurlResponseAcceptor.cpp' || echo './'`libmaus2/network/CurlResponseAcceptor.cpp
In file included from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtComputeSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtComputeSSA.cpp:18:
./libmaus2/autoarray/AutoArray.hpp: In static member function ‘static std::vector<long long unsigned int> libmaus2::sorting::MergingReadBack<_data_type, _order_type>::mergeStep(const string&, const std::vector<long long unsigned int>&, uint64_t, uint64_t) [with _data_type = IsaTriple; _order_type = std::less<IsaTriple>]’:
./libmaus2/autoarray/AutoArray.hpp:1132:5: warning: ‘<anonymous>’ may be used uninitialized in this function [-Wmaybe-uninitialized]
1132 | array[i] = N();
| ^~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdMutex.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtComputeSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtComputeSSA.cpp:18:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, IsaTriple>*, std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/network/CurlResponseAcceptor.cpp -fPIC -DPIC -o libmaus2/network/.libs/la-CurlResponseAcceptor.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/network/CurlResponseAcceptor.cpp -o libmaus2/network/la-CurlResponseAcceptor.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/network/la-HttpCurlResponseAcceptor.lo `test -f 'libmaus2/network/HttpCurlResponseAcceptor.cpp' || echo './'`libmaus2/network/HttpCurlResponseAcceptor.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/network/HttpCurlResponseAcceptor.cpp -fPIC -DPIC -o libmaus2/network/.libs/la-HttpCurlResponseAcceptor.o
/usr/include/c++/10/bits/vector.tcc: In function ‘_ZN8libmaus210suffixsort6bwtb3m13BwtComputeSSA10computeSSAENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEyyS8_byyyPSoS8_S8_._omp_fn.0’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, IsaTriple>*, std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/network/HttpCurlResponseAcceptor.cpp -o libmaus2/network/la-HttpCurlResponseAcceptor.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/network/la-FtpCurlResponseAcceptor.lo `test -f 'libmaus2/network/FtpCurlResponseAcceptor.cpp' || echo './'`libmaus2/network/FtpCurlResponseAcceptor.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/network/FtpCurlResponseAcceptor.cpp -fPIC -DPIC -o libmaus2/network/.libs/la-FtpCurlResponseAcceptor.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/network/FtpCurlResponseAcceptor.cpp -o libmaus2/network/la-FtpCurlResponseAcceptor.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/network/la-CurlObject.lo `test -f 'libmaus2/network/CurlObject.cpp' || echo './'`libmaus2/network/CurlObject.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/network/CurlObject.cpp -fPIC -DPIC -o libmaus2/network/.libs/la-CurlObject.o
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/network/CurlObject.cpp -o libmaus2/network/la-CurlObject.o >/dev/null 2>&1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1969:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1969 | __sort(_RandomAccessIterator __first, _RandomAccessIterator __last,
| ^~~~~~
/usr/include/c++/10/bits/stl_algo.h:1969:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtComputeSSA.cpp -o libmaus2/suffixsort/bwtb3m/la-BwtComputeSSA.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/network/la-CurlObjectReader.lo `test -f 'libmaus2/network/CurlObjectReader.cpp' || echo './'`libmaus2/network/CurlObjectReader.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/network/CurlObjectReader.cpp -fPIC -DPIC -o libmaus2/network/.libs/la-CurlObjectReader.o
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >; _Distance = int; _Tp = libmaus2::gamma::SparseGammaGapMultiFile; _Compare = __gnu_cxx::__ops::_Iter_comp_val<std::less<libmaus2::gamma::SparseGammaGapMultiFile> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >’ changed in GCC 7.1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/network/CurlObjectReader.cpp -o libmaus2/network/la-CurlObjectReader.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/network/la-CurlObjectThreadCallable.lo `test -f 'libmaus2/network/CurlObjectThreadCallable.cpp' || echo './'`libmaus2/network/CurlObjectThreadCallable.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/network/CurlObjectThreadCallable.cpp -fPIC -DPIC -o libmaus2/network/.libs/la-CurlObjectThreadCallable.o
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeLeaf::symbolVector(std::vector<long long int>&) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/network/CurlObjectThreadCallable.cpp -o libmaus2/network/la-CurlObjectThreadCallable.o >/dev/null 2>&1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::huffman::IndexEntry&}; _Tp = libmaus2::huffman::IndexEntry; _Alloc = std::allocator<libmaus2::huffman::IndexEntry>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::huffman::IndexEntry>::iterator’ changed in GCC 7.1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/network/la-CurlInputStreamBuffer.lo `test -f 'libmaus2/network/CurlInputStreamBuffer.cpp' || echo './'`libmaus2/network/CurlInputStreamBuffer.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/network/CurlInputStreamBuffer.cpp -fPIC -DPIC -o libmaus2/network/.libs/la-CurlInputStreamBuffer.o
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::huffman::IndexEntry}; _Tp = libmaus2::huffman::IndexEntry; _Alloc = std::allocator<libmaus2::huffman::IndexEntry>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::huffman::IndexEntry>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::suffixsort::BwtMergeZBlock}; _Tp = libmaus2::suffixsort::BwtMergeZBlock; _Alloc = std::allocator<libmaus2::suffixsort::BwtMergeZBlock>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::suffixsort::BwtMergeZBlock>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::suffixsort::BwtMergeZBlock>::iterator’ changed in GCC 7.1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/network/CurlInputStreamBuffer.cpp -o libmaus2/network/la-CurlInputStreamBuffer.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/network/la-CurlInputStream.lo `test -f 'libmaus2/network/CurlInputStream.cpp' || echo './'`libmaus2/network/CurlInputStream.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/network/CurlInputStream.cpp -fPIC -DPIC -o libmaus2/network/.libs/la-CurlInputStream.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/network/CurlInputStream.cpp -o libmaus2/network/la-CurlInputStream.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/network/la-GetHostName.lo `test -f 'libmaus2/network/GetHostName.cpp' || echo './'`libmaus2/network/GetHostName.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/network/GetHostName.cpp -fPIC -DPIC -o libmaus2/network/.libs/la-GetHostName.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/network/GetHostName.cpp -o libmaus2/network/la-GetHostName.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/parallel/la-SimpleThreadWorkPackage.lo `test -f 'libmaus2/parallel/SimpleThreadWorkPackage.cpp' || echo './'`libmaus2/parallel/SimpleThreadWorkPackage.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/parallel/SimpleThreadWorkPackage.cpp -fPIC -DPIC -o libmaus2/parallel/.libs/la-SimpleThreadWorkPackage.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/parallel/SimpleThreadWorkPackage.cpp -o libmaus2/parallel/la-SimpleThreadWorkPackage.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/parallel/la-StdSemaphore.lo `test -f 'libmaus2/parallel/StdSemaphore.cpp' || echo './'`libmaus2/parallel/StdSemaphore.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/parallel/StdSemaphore.cpp -fPIC -DPIC -o libmaus2/parallel/.libs/la-StdSemaphore.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/parallel/StdSemaphore.cpp -o libmaus2/parallel/la-StdSemaphore.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/parallel/la-StdMutex.lo `test -f 'libmaus2/parallel/StdMutex.cpp' || echo './'`libmaus2/parallel/StdMutex.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/parallel/StdMutex.cpp -fPIC -DPIC -o libmaus2/parallel/.libs/la-StdMutex.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/parallel/StdMutex.cpp -o libmaus2/parallel/la-StdMutex.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/parallel/la-StdSpinLock.lo `test -f 'libmaus2/parallel/StdSpinLock.cpp' || echo './'`libmaus2/parallel/StdSpinLock.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/parallel/StdSpinLock.cpp -fPIC -DPIC -o libmaus2/parallel/.libs/la-StdSpinLock.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/parallel/la-StaticInitialisation.lo `test -f 'libmaus2/parallel/StaticInitialisation.cpp' || echo './'`libmaus2/parallel/StaticInitialisation.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/parallel/StaticInitialisation.cpp -fPIC -DPIC -o libmaus2/parallel/.libs/la-StaticInitialisation.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/parallel/StdSpinLock.cpp -o libmaus2/parallel/la-StdSpinLock.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/parallel/StaticInitialisation.cpp -o libmaus2/parallel/la-StaticInitialisation.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/autoarray/la-AutoArray.lo `test -f 'libmaus2/autoarray/AutoArray.cpp' || echo './'`libmaus2/autoarray/AutoArray.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/autoarray/AutoArray.cpp -fPIC -DPIC -o libmaus2/autoarray/.libs/la-AutoArray.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/autoarray/AutoArray.cpp -o libmaus2/autoarray/la-AutoArray.o >/dev/null 2>&1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In function ‘uint64_t libmaus2::wavelet::ImpExternalWaveletGeneratorCompactHuffman::createFinalStream(stream_type&) [with stream_type = libmaus2::aio::OutputStreamInstance]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/stacktrace/StackTrace.cpp -fPIC -DPIC -o libmaus2/stacktrace/.libs/la-StackTrace.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/stacktrace/StackTraceBufferContainer.cpp -fPIC -DPIC -o libmaus2/stacktrace/.libs/la-StackTraceBufferContainer.o
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/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c -o libmaus2/posix/la-PosixExecute.lo `test -f 'libmaus2/posix/PosixExecute.cpp' || echo './'`libmaus2/posix/PosixExecute.cpp
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/stacktrace/StackTraceBufferContainer.cpp -o libmaus2/stacktrace/la-StackTraceBufferContainer.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/exception/LibMausException.cpp -fPIC -DPIC -o libmaus2/exception/.libs/la-LibMausException.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/arch/PageSize.cpp -o libmaus2/arch/la-PageSize.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -fopenmp -Wl,-z,relro -lz -module -shared -export-dynamic -avoid-version -Wl,-z,relro -rdynamic -o libmaus2_scram_mod.la -rpath /usr/lib/arm-linux-gnueabihf/libmaus2/2.0.768 libmaus2/bambam/scram_mod_la-Scram.lo -lz -lz
libtool: link: gcc -shared -fPIC -DPIC libmaus2/bambam/.libs/scram_mod_la-Scram.o -lz -g -O2 -fstack-protector-strong -O3 -pthread -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,relro -pthread -fopenmp -Wl,-soname -Wl,libmaus2_scram_mod.so -o .libs/libmaus2_scram_mod.so
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/exception/LibMausException.cpp -o libmaus2/exception/la-LibMausException.o >/dev/null 2>&1
libtool: link: ( cd ".libs" && rm -f "libmaus2_scram_mod.la" && ln -s "../libmaus2_scram_mod.la" "libmaus2_scram_mod.la" )
/bin/bash ../libtool --tag=CXX --mode=link g++ -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -Wl,-z,relro -version-info 2:768:0 -L/lib -Wl,-z,relro -rdynamic -o libmaus2_posix.la -rpath /usr/lib/arm-linux-gnueabihf libmaus2/posix/la-PosixExecute.lo libmaus2/posix/la-PosixFunctions.lo -ldl -lz
libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/10/crtbeginS.o libmaus2/posix/.libs/la-PosixExecute.o libmaus2/posix/.libs/la-PosixFunctions.o -L/lib -ldl -lz -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/10/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf/crtn.o -pthread -fopenmp -g -O2 -fstack-protector-strong -O3 -pthread -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,relro -pthread -fopenmp -Wl,-soname -Wl,libmaus2_posix.so.2 -o .libs/libmaus2_posix.so.2.0.768
libtool: link: (cd ".libs" && rm -f "libmaus2_posix.so.2" && ln -s "libmaus2_posix.so.2.0.768" "libmaus2_posix.so.2")
libtool: link: (cd ".libs" && rm -f "libmaus2_posix.so" && ln -s "libmaus2_posix.so.2.0.768" "libmaus2_posix.so")
libtool: link: ar cr .libs/libmaus2_posix.a libmaus2/posix/la-PosixExecute.o libmaus2/posix/la-PosixFunctions.o
libtool: link: ranlib .libs/libmaus2_posix.a
libtool: link: ( cd ".libs" && rm -f "libmaus2_posix.la" && ln -s "../libmaus2_posix.la" "libmaus2_posix.la" )
/bin/bash ../libtool --tag=CXX --mode=link g++ -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -Wl,-z,relro -version-info 2:768:0 -L/lib -Wl,-z,relro -rdynamic -o libmaus2_demangle.la -rpath /usr/lib/arm-linux-gnueabihf libmaus2/demangle/la-Demangle.lo -ldl -lz
libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/10/crtbeginS.o libmaus2/demangle/.libs/la-Demangle.o -L/lib -ldl -lz -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/10/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf/crtn.o -pthread -fopenmp -g -O2 -fstack-protector-strong -O3 -pthread -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,relro -pthread -fopenmp -Wl,-soname -Wl,libmaus2_demangle.so.2 -o .libs/libmaus2_demangle.so.2.0.768
libtool: link: (cd ".libs" && rm -f "libmaus2_demangle.so.2" && ln -s "libmaus2_demangle.so.2.0.768" "libmaus2_demangle.so.2")
libtool: link: (cd ".libs" && rm -f "libmaus2_demangle.so" && ln -s "libmaus2_demangle.so.2.0.768" "libmaus2_demangle.so")
libtool: link: ar cr .libs/libmaus2_demangle.a libmaus2/demangle/la-Demangle.o
libtool: link: ranlib .libs/libmaus2_demangle.a
libtool: link: ( cd ".libs" && rm -f "libmaus2_demangle.la" && ln -s "../libmaus2_demangle.la" "libmaus2_demangle.la" )
/bin/bash ../libtool --tag=CXX --mode=link g++ -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -Wl,-z,relro -version-info 2:768:0 -L/lib -Wl,-z,relro -rdynamic -o libmaus2_arch.la -rpath /usr/lib/arm-linux-gnueabihf libmaus2/arch/la-I386Features.lo libmaus2/arch/la-CacheLineSize.lo libmaus2/arch/la-PageSize.lo -ldl -lz
libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/10/crtbeginS.o libmaus2/arch/.libs/la-I386Features.o libmaus2/arch/.libs/la-CacheLineSize.o libmaus2/arch/.libs/la-PageSize.o -L/lib -ldl -lz -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/10/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf/crtn.o -pthread -fopenmp -g -O2 -fstack-protector-strong -O3 -pthread -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,relro -pthread -fopenmp -Wl,-soname -Wl,libmaus2_arch.so.2 -o .libs/libmaus2_arch.so.2.0.768
libtool: link: (cd ".libs" && rm -f "libmaus2_arch.so.2" && ln -s "libmaus2_arch.so.2.0.768" "libmaus2_arch.so.2")
libtool: link: (cd ".libs" && rm -f "libmaus2_arch.so" && ln -s "libmaus2_arch.so.2.0.768" "libmaus2_arch.so")
libtool: link: ar cr .libs/libmaus2_arch.a libmaus2/arch/la-I386Features.o libmaus2/arch/la-CacheLineSize.o libmaus2/arch/la-PageSize.o
libtool: link: ranlib .libs/libmaus2_arch.a
libtool: link: ( cd ".libs" && rm -f "libmaus2_arch.la" && ln -s "../libmaus2_arch.la" "libmaus2_arch.la" )
/bin/bash ../libtool --tag=CXX --mode=link g++ -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -Wl,-z,relro -version-info 2:768:0 -L/lib -Wl,-z,relro -rdynamic -o libmaus2_stacktrace.la -rpath /usr/lib/arm-linux-gnueabihf libmaus2/stacktrace/la-StackTrace.lo libmaus2/stacktrace/la-StackTraceBufferContainer.lo -ldl libmaus2_posix.la libmaus2_demangle.la -lz
libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/10/crtbeginS.o libmaus2/stacktrace/.libs/la-StackTrace.o libmaus2/stacktrace/.libs/la-StackTraceBufferContainer.o -Wl,-rpath -Wl,/<<BUILDDIR>>/libmaus2-2.0.768+dfsg/src/.libs -L/lib -ldl ./.libs/libmaus2_posix.so ./.libs/libmaus2_demangle.so -lz -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/10/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf/crtn.o -pthread -fopenmp -g -O2 -fstack-protector-strong -O3 -pthread -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,relro -pthread -fopenmp -Wl,-soname -Wl,libmaus2_stacktrace.so.2 -o .libs/libmaus2_stacktrace.so.2.0.768
libtool: link: (cd ".libs" && rm -f "libmaus2_stacktrace.so.2" && ln -s "libmaus2_stacktrace.so.2.0.768" "libmaus2_stacktrace.so.2")
libtool: link: (cd ".libs" && rm -f "libmaus2_stacktrace.so" && ln -s "libmaus2_stacktrace.so.2.0.768" "libmaus2_stacktrace.so")
libtool: link: ar cr .libs/libmaus2_stacktrace.a libmaus2/stacktrace/la-StackTrace.o libmaus2/stacktrace/la-StackTraceBufferContainer.o
libtool: link: ranlib .libs/libmaus2_stacktrace.a
libtool: link: ( cd ".libs" && rm -f "libmaus2_stacktrace.la" && ln -s "../libmaus2_stacktrace.la" "libmaus2_stacktrace.la" )
/bin/bash ../libtool --tag=CXX --mode=link g++ -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -Wl,-z,relro -version-info 2:768:0 -L/lib -Wl,-z,relro -rdynamic -o libmaus2_autoarray.la -rpath /usr/lib/arm-linux-gnueabihf libmaus2/autoarray/la-AutoArray.lo -ldl libmaus2_stacktrace.la libmaus2_demangle.la libmaus2_arch.la -lz
/bin/bash ../libtool --tag=CXX --mode=link g++ -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -Wl,-z,relro -version-info 2:768:0 -L/lib -Wl,-z,relro -rdynamic -o libmaus2_exception.la -rpath /usr/lib/arm-linux-gnueabihf libmaus2/exception/la-LibMausException.lo -ldl libmaus2_stacktrace.la libmaus2_demangle.la -lz
libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/10/crtbeginS.o libmaus2/exception/.libs/la-LibMausException.o -Wl,-rpath -Wl,/<<BUILDDIR>>/libmaus2-2.0.768+dfsg/src/.libs -L/lib -ldl ./.libs/libmaus2_stacktrace.so ./.libs/libmaus2_demangle.so -lz -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/10/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf/crtn.o -pthread -fopenmp -g -O2 -fstack-protector-strong -O3 -pthread -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,relro -pthread -fopenmp -Wl,-soname -Wl,libmaus2_exception.so.2 -o .libs/libmaus2_exception.so.2.0.768
libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/10/crtbeginS.o libmaus2/autoarray/.libs/la-AutoArray.o -Wl,-rpath -Wl,/<<BUILDDIR>>/libmaus2-2.0.768+dfsg/src/.libs -L/lib -ldl ./.libs/libmaus2_stacktrace.so ./.libs/libmaus2_demangle.so ./.libs/libmaus2_arch.so -lz -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/10/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf/crtn.o -pthread -fopenmp -g -O2 -fstack-protector-strong -O3 -pthread -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,relro -pthread -fopenmp -Wl,-soname -Wl,libmaus2_autoarray.so.2 -o .libs/libmaus2_autoarray.so.2.0.768
libtool: link: (cd ".libs" && rm -f "libmaus2_exception.so.2" && ln -s "libmaus2_exception.so.2.0.768" "libmaus2_exception.so.2")
libtool: link: (cd ".libs" && rm -f "libmaus2_exception.so" && ln -s "libmaus2_exception.so.2.0.768" "libmaus2_exception.so")
libtool: link: ar cr .libs/libmaus2_exception.a libmaus2/exception/la-LibMausException.o
libtool: link: ranlib .libs/libmaus2_exception.a
libtool: link: (cd ".libs" && rm -f "libmaus2_autoarray.so.2" && ln -s "libmaus2_autoarray.so.2.0.768" "libmaus2_autoarray.so.2")
libtool: link: (cd ".libs" && rm -f "libmaus2_autoarray.so" && ln -s "libmaus2_autoarray.so.2.0.768" "libmaus2_autoarray.so")
libtool: link: ar cr .libs/libmaus2_autoarray.a libmaus2/autoarray/la-AutoArray.o
libtool: link: ranlib .libs/libmaus2_autoarray.a
libtool: link: ( cd ".libs" && rm -f "libmaus2_exception.la" && ln -s "../libmaus2_exception.la" "libmaus2_exception.la" )
libtool: link: ( cd ".libs" && rm -f "libmaus2_autoarray.la" && ln -s "../libmaus2_autoarray.la" "libmaus2_autoarray.la" )
/bin/bash ../libtool --tag=CXX --mode=link g++ -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -Wl,-z,relro -version-info 2:768:0 -L/lib -Wl,-z,relro -rdynamic -o libmaus2_parallel.la -rpath /usr/lib/arm-linux-gnueabihf libmaus2/parallel/la-SimpleThreadWorkPackage.lo libmaus2/parallel/la-StdSemaphore.lo libmaus2/parallel/la-StdMutex.lo libmaus2/parallel/la-StdSpinLock.lo libmaus2/parallel/la-StaticInitialisation.lo -ldl libmaus2_autoarray.la libmaus2_exception.la libmaus2_stacktrace.la libmaus2_demangle.la libmaus2_arch.la -lz
libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/10/crtbeginS.o libmaus2/parallel/.libs/la-SimpleThreadWorkPackage.o libmaus2/parallel/.libs/la-StdSemaphore.o libmaus2/parallel/.libs/la-StdMutex.o libmaus2/parallel/.libs/la-StdSpinLock.o libmaus2/parallel/.libs/la-StaticInitialisation.o -Wl,-rpath -Wl,/<<BUILDDIR>>/libmaus2-2.0.768+dfsg/src/.libs -L/lib -ldl ./.libs/libmaus2_autoarray.so ./.libs/libmaus2_exception.so ./.libs/libmaus2_stacktrace.so ./.libs/libmaus2_demangle.so ./.libs/libmaus2_arch.so -lz -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/10/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf/crtn.o -pthread -fopenmp -g -O2 -fstack-protector-strong -O3 -pthread -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,relro -pthread -fopenmp -Wl,-soname -Wl,libmaus2_parallel.so.2 -o .libs/libmaus2_parallel.so.2.0.768
libtool: link: (cd ".libs" && rm -f "libmaus2_parallel.so.2" && ln -s "libmaus2_parallel.so.2.0.768" "libmaus2_parallel.so.2")
libtool: link: (cd ".libs" && rm -f "libmaus2_parallel.so" && ln -s "libmaus2_parallel.so.2.0.768" "libmaus2_parallel.so")
libtool: link: ar cr .libs/libmaus2_parallel.a libmaus2/parallel/la-SimpleThreadWorkPackage.o libmaus2/parallel/la-StdSemaphore.o libmaus2/parallel/la-StdMutex.o libmaus2/parallel/la-StdSpinLock.o libmaus2/parallel/la-StaticInitialisation.o
libtool: link: ranlib .libs/libmaus2_parallel.a
libtool: link: ( cd ".libs" && rm -f "libmaus2_parallel.la" && ln -s "../libmaus2_parallel.la" "libmaus2_parallel.la" )
/bin/bash ../libtool --tag=CXX --mode=link g++ -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -Wl,-z,relro -version-info 2:768:0 -Wl,-z,relro -rdynamic -o libmaus2_simd_align_128.la -rpath /usr/lib/arm-linux-gnueabihf libmaus2/lcs/simd_align_128_la-SimdX86GlobalAlignmentConstants128.lo libmaus2/lcs/simd_align_128_la-SimdX86BandedGlobalAlignmentX128_8.lo libmaus2/lcs/simd_align_128_la-SimdX86BandedGlobalAlignmentX128_16.lo libmaus2/lcs/simd_align_128_la-SimdX86GlobalAlignmentX128_8.lo libmaus2/lcs/simd_align_128_la-SimdX86GlobalAlignmentX128_16.lo -ldl libmaus2_parallel.la libmaus2_autoarray.la libmaus2_exception.la libmaus2_stacktrace.la libmaus2_posix.la libmaus2_demangle.la libmaus2_arch.la -lz
/bin/bash ../libtool --tag=CXX --mode=link g++ -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -Wl,-z,relro -version-info 2:768:0 -Wl,-z,relro -rdynamic -o libmaus2_simd_align_256.la -rpath /usr/lib/arm-linux-gnueabihf libmaus2/lcs/simd_align_256_la-SimdX86GlobalAlignmentConstants256.lo libmaus2/lcs/simd_align_256_la-SimdX86BandedGlobalAlignmentY256_8.lo libmaus2/lcs/simd_align_256_la-SimdX86BandedGlobalAlignmentY256_16.lo libmaus2/lcs/simd_align_256_la-SimdX86BandedGlobalAlignmentScoreY256_16.lo libmaus2/lcs/simd_align_256_la-SimdX86GlobalAlignmentY256_8.lo libmaus2/lcs/simd_align_256_la-SimdX86GlobalAlignmentY256_16.lo libmaus2/lcs/simd_align_256_la-AlignmentOneAgainstManyAVX2.lo -ldl libmaus2_parallel.la libmaus2_autoarray.la libmaus2_exception.la libmaus2_stacktrace.la libmaus2_posix.la libmaus2_demangle.la libmaus2_arch.la -lz
libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/10/crtbeginS.o libmaus2/lcs/.libs/simd_align_128_la-SimdX86GlobalAlignmentConstants128.o libmaus2/lcs/.libs/simd_align_128_la-SimdX86BandedGlobalAlignmentX128_8.o libmaus2/lcs/.libs/simd_align_128_la-SimdX86BandedGlobalAlignmentX128_16.o libmaus2/lcs/.libs/simd_align_128_la-SimdX86GlobalAlignmentX128_8.o libmaus2/lcs/.libs/simd_align_128_la-SimdX86GlobalAlignmentX128_16.o -Wl,-rpath -Wl,/<<BUILDDIR>>/libmaus2-2.0.768+dfsg/src/.libs -ldl ./.libs/libmaus2_parallel.so ./.libs/libmaus2_autoarray.so ./.libs/libmaus2_exception.so ./.libs/libmaus2_stacktrace.so ./.libs/libmaus2_posix.so ./.libs/libmaus2_demangle.so ./.libs/libmaus2_arch.so -lz -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/10/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf/crtn.o -pthread -fopenmp -g -O2 -fstack-protector-strong -O3 -pthread -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,relro -pthread -fopenmp -Wl,-soname -Wl,libmaus2_simd_align_128.so.2 -o .libs/libmaus2_simd_align_128.so.2.0.768
libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/10/crtbeginS.o libmaus2/lcs/.libs/simd_align_256_la-SimdX86GlobalAlignmentConstants256.o libmaus2/lcs/.libs/simd_align_256_la-SimdX86BandedGlobalAlignmentY256_8.o libmaus2/lcs/.libs/simd_align_256_la-SimdX86BandedGlobalAlignmentY256_16.o libmaus2/lcs/.libs/simd_align_256_la-SimdX86BandedGlobalAlignmentScoreY256_16.o libmaus2/lcs/.libs/simd_align_256_la-SimdX86GlobalAlignmentY256_8.o libmaus2/lcs/.libs/simd_align_256_la-SimdX86GlobalAlignmentY256_16.o libmaus2/lcs/.libs/simd_align_256_la-AlignmentOneAgainstManyAVX2.o -Wl,-rpath -Wl,/<<BUILDDIR>>/libmaus2-2.0.768+dfsg/src/.libs -ldl ./.libs/libmaus2_parallel.so ./.libs/libmaus2_autoarray.so ./.libs/libmaus2_exception.so ./.libs/libmaus2_stacktrace.so ./.libs/libmaus2_posix.so ./.libs/libmaus2_demangle.so ./.libs/libmaus2_arch.so -lz -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/10/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf/crtn.o -pthread -fopenmp -g -O2 -fstack-protector-strong -O3 -pthread -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,relro -pthread -fopenmp -Wl,-soname -Wl,libmaus2_simd_align_256.so.2 -o .libs/libmaus2_simd_align_256.so.2.0.768
libtool: link: (cd ".libs" && rm -f "libmaus2_simd_align_128.so.2" && ln -s "libmaus2_simd_align_128.so.2.0.768" "libmaus2_simd_align_128.so.2")
libtool: link: (cd ".libs" && rm -f "libmaus2_simd_align_128.so" && ln -s "libmaus2_simd_align_128.so.2.0.768" "libmaus2_simd_align_128.so")
libtool: link: ar cr .libs/libmaus2_simd_align_128.a libmaus2/lcs/simd_align_128_la-SimdX86GlobalAlignmentConstants128.o libmaus2/lcs/simd_align_128_la-SimdX86BandedGlobalAlignmentX128_8.o libmaus2/lcs/simd_align_128_la-SimdX86BandedGlobalAlignmentX128_16.o libmaus2/lcs/simd_align_128_la-SimdX86GlobalAlignmentX128_8.o libmaus2/lcs/simd_align_128_la-SimdX86GlobalAlignmentX128_16.o
libtool: link: ranlib .libs/libmaus2_simd_align_128.a
libtool: link: ( cd ".libs" && rm -f "libmaus2_simd_align_128.la" && ln -s "../libmaus2_simd_align_128.la" "libmaus2_simd_align_128.la" )
libtool: link: (cd ".libs" && rm -f "libmaus2_simd_align_256.so.2" && ln -s "libmaus2_simd_align_256.so.2.0.768" "libmaus2_simd_align_256.so.2")
libtool: link: (cd ".libs" && rm -f "libmaus2_simd_align_256.so" && ln -s "libmaus2_simd_align_256.so.2.0.768" "libmaus2_simd_align_256.so")
/usr/include/c++/10/bits/stl_vector.h: In function ‘uint64_t libmaus2::wavelet::ImpExternalWaveletGeneratorCompactHuffmanParallel::createFinalStream(stream_type&, uint64_t) [with stream_type = std::basic_ostream<char>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
libtool: link: ar cr .libs/libmaus2_simd_align_256.a libmaus2/lcs/simd_align_256_la-SimdX86GlobalAlignmentConstants256.o libmaus2/lcs/simd_align_256_la-SimdX86BandedGlobalAlignmentY256_8.o libmaus2/lcs/simd_align_256_la-SimdX86BandedGlobalAlignmentY256_16.o libmaus2/lcs/simd_align_256_la-SimdX86BandedGlobalAlignmentScoreY256_16.o libmaus2/lcs/simd_align_256_la-SimdX86GlobalAlignmentY256_8.o libmaus2/lcs/simd_align_256_la-SimdX86GlobalAlignmentY256_16.o libmaus2/lcs/simd_align_256_la-AlignmentOneAgainstManyAVX2.o
libtool: link: ranlib .libs/libmaus2_simd_align_256.a
libtool: link: ( cd ".libs" && rm -f "libmaus2_simd_align_256.la" && ln -s "../libmaus2_simd_align_256.la" "libmaus2_simd_align_256.la" )
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::suffixsort::GapArrayByte::saveGammaGapArray(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int>}; _Tp = std::pair<std::__cxx11::basic_string<char>, long long unsigned int>; _Alloc = std::allocator<std::pair<std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<std::__cxx11::basic_string<char>, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘_ZN8libmaus27wavelet49ImpExternalWaveletGeneratorCompactHuffmanParallel17createFinalStreamISoEEyRT_y._omp_fn.0’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long unsigned int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<long long unsigned int> libmaus2::gamma::SparseGammaGapFileIndexMultiDecoder::getSplitKeysInternal(const libmaus2::gamma::SparseGammaGapFileIndexMultiDecoder&, const libmaus2::gamma::SparseGammaGapFileIndexMultiDecoder&, uint64_t, uint64_t)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::FileTempFileContainer::getOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::FileTempFileContainer::openOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::istream& libmaus2::util::FileTempFileContainer::openInputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In function ‘static void libmaus2::huffman::RLEncoderTemplate<_huffmanencoderfile_type>::concatenate(const std::vector<std::__cxx11::basic_string<char> >&, const string&, bool) [with _huffmanencoderfile_type = libmaus2::huffman::HuffmanEncoderFileTemplate<libmaus2::aio::SynchronousGenericOutput<unsigned char>, libmaus2::bitio::FastWriteBitWriterTemplate<unsigned char, libmaus2::aio::PutOutputIterator<unsigned char, libmaus2::aio::SynchronousGenericOutput<unsigned char> >, 128, 255, false> >]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::sorting::MergingReadBack<long long unsigned int>::HeapOrderAdapter>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::sorting::MergingReadBack<_data_type, _order_type>::MergingReadBack(const string&, const std::vector<long long unsigned int>&, uint64_t, uint64_t) [with _data_type = long long unsigned int; _order_type = std::less<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘virtual void libmaus2::suffixsort::bwtb3m::MergeStrategyMergeBlock::fillGapRequestObjects(uint64_t)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::suffixsort::BwtMergeZBlock*, std::vector<libmaus2::suffixsort::BwtMergeZBlock> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>}; _Tp = libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>; _Alloc = std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘static void libmaus2::sorting::InPlaceParallelSort::mergestepRecLevel(iterator, uint64_t, uint64_t, order_type, base_sort&, int, int, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<iterator, order_type, base_sort> >&, uint64_t) [with iterator = std::pair<long long unsigned int, long long unsigned int>*; order_type = libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>; base_sort = libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>}; _Tp = libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>; _Alloc = std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘static void libmaus2::sorting::InPlaceParallelSort::mergestepRecLevel(iterator, uint64_t, uint64_t, order_type, base_sort&, int, int, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<iterator, order_type, base_sort> >&, uint64_t) [with iterator = std::pair<long long unsigned int, long long unsigned int>*; order_type = libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>; base_sort = libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>&}; _Tp = libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>; _Alloc = std::allocator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::gamma::GammaGapEncoder::encode(iterator, uint64_t) [with iterator = const std::atomic<unsigned int>*]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<std::pair<long long unsigned int, long long unsigned int>, std::pair<long long unsigned int, long long unsigned int> >}; _Tp = std::pair<std::pair<long long unsigned int, long long unsigned int>, std::pair<long long unsigned int, long long unsigned int> >; _Alloc = std::allocator<std::pair<std::pair<long long unsigned int, long long unsigned int>, std::pair<long long unsigned int, long long unsigned int> > >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<std::pair<long long unsigned int, long long unsigned int>, std::pair<long long unsigned int, long long unsigned int> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<std::pair<long long unsigned int, long long unsigned int>, std::pair<long long unsigned int, long long unsigned int> >}; _Tp = std::pair<std::pair<long long unsigned int, long long unsigned int>, std::pair<long long unsigned int, long long unsigned int> >; _Alloc = std::allocator<std::pair<std::pair<long long unsigned int, long long unsigned int>, std::pair<long long unsigned int, long long unsigned int> > >]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<std::pair<long long unsigned int, long long unsigned int>, std::pair<long long unsigned int, long long unsigned int> >*, std::vector<std::pair<std::pair<long long unsigned int, long long unsigned int>, std::pair<long long unsigned int, long long unsigned int> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static uint64_t libmaus2::sorting::PairFileSorting::reduce(const string&, uint64_t, uint64_t, out_type&, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static uint64_t libmaus2::sorting::PairFileSorting::reduce(const string&, uint64_t, uint64_t, out_type&, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long int}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::util::KMP::BestPrefix<stream_type>::BestPrefix(stream_type&, uint64_t) [with stream_type = std::basic_istream<char>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘int64_t libmaus2::util::KMP::BestPrefix<stream_type>::operator[](uint64_t) [with stream_type = std::basic_istream<char>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static uint64_t libmaus2::suffixsort::BwtMergeBlockSortRequestBase::findSplitCommonBounded(const string&, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:41,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
105 | }
| ^
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In function ‘_ZN8libmaus210suffixsort6bwtb3m20BwtMergeSortTemplateINS0_14ByteInputTypesILj32EEEE10computeBwtERKNS1_19BwtMergeSortOptionsEPSo._omp_fn.1’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static uint64_t libmaus2::suffixsort::BwtMergeBlockSortRequestBase::findSplitCommonBounded(const string&, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t) [with input_types_type = libmaus2::suffixsort::CompactInputTypes<64>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:41,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
105 | }
| ^
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In function ‘_ZN8libmaus210suffixsort6bwtb3m20BwtMergeSortTemplateINS0_17CompactInputTypesILj64EEEE10computeBwtERKNS1_19BwtMergeSortOptionsEPSo._omp_fn.1’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static uint64_t libmaus2::suffixsort::BwtMergeBlockSortRequestBase::findSplitCommonBounded(const string&, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t) [with input_types_type = libmaus2::suffixsort::CompactInputTypes<32>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:41,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
105 | }
| ^
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In function ‘_ZN8libmaus210suffixsort6bwtb3m20BwtMergeSortTemplateINS0_17CompactInputTypesILj32EEEE10computeBwtERKNS1_19BwtMergeSortOptionsEPSo._omp_fn.1’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static uint64_t libmaus2::suffixsort::BwtMergeBlockSortRequestBase::findSplitCommonBounded(const string&, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t) [with input_types_type = libmaus2::suffixsort::PacInputTypes<64>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:41,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
105 | }
| ^
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In function ‘_ZN8libmaus210suffixsort6bwtb3m20BwtMergeSortTemplateINS0_13PacInputTypesILj64EEEE10computeBwtERKNS1_19BwtMergeSortOptionsEPSo._omp_fn.1’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static uint64_t libmaus2::suffixsort::BwtMergeBlockSortRequestBase::findSplitCommonBounded(const string&, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t) [with input_types_type = libmaus2::suffixsort::PacTermInputTypes<64>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:41,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
105 | }
| ^
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In function ‘_ZN8libmaus210suffixsort6bwtb3m20BwtMergeSortTemplateINS0_17PacTermInputTypesILj64EEEE10computeBwtERKNS1_19BwtMergeSortOptionsEPSo._omp_fn.1’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static uint64_t libmaus2::suffixsort::BwtMergeBlockSortRequestBase::findSplitCommonBounded(const string&, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t) [with input_types_type = libmaus2::suffixsort::PacInputTypes<32>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:41,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
105 | }
| ^
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In function ‘_ZN8libmaus210suffixsort6bwtb3m20BwtMergeSortTemplateINS0_13PacInputTypesILj32EEEE10computeBwtERKNS1_19BwtMergeSortOptionsEPSo._omp_fn.1’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static uint64_t libmaus2::suffixsort::BwtMergeBlockSortRequestBase::findSplitCommonBounded(const string&, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t) [with input_types_type = libmaus2::suffixsort::Lz4InputTypes<64>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:41,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
105 | }
| ^
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In function ‘_ZN8libmaus210suffixsort6bwtb3m20BwtMergeSortTemplateINS0_13Lz4InputTypesILj64EEEE10computeBwtERKNS1_19BwtMergeSortOptionsEPSo._omp_fn.1’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static uint64_t libmaus2::suffixsort::BwtMergeBlockSortRequestBase::findSplitCommonBounded(const string&, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<64>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:41,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
105 | }
| ^
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In function ‘_ZN8libmaus210suffixsort6bwtb3m20BwtMergeSortTemplateINS0_14ByteInputTypesILj64EEEE10computeBwtERKNS1_19BwtMergeSortOptionsEPSo._omp_fn.1’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static uint64_t libmaus2::suffixsort::BwtMergeBlockSortRequestBase::findSplitCommonBounded(const string&, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t) [with input_types_type = libmaus2::suffixsort::PacTermInputTypes<32>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:41,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
105 | }
| ^
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In function ‘_ZN8libmaus210suffixsort6bwtb3m20BwtMergeSortTemplateINS0_17PacTermInputTypesILj32EEEE10computeBwtERKNS1_19BwtMergeSortOptionsEPSo._omp_fn.1’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static uint64_t libmaus2::suffixsort::BwtMergeBlockSortRequestBase::findSplitCommonBounded(const string&, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t) [with input_types_type = libmaus2::suffixsort::Lz4InputTypes<32>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:41,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
105 | }
| ^
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In function ‘_ZN8libmaus210suffixsort6bwtb3m20BwtMergeSortTemplateINS0_13Lz4InputTypesILj32EEEE10computeBwtERKNS1_19BwtMergeSortOptionsEPSo._omp_fn.1’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘static std::pair<long long unsigned int, long long unsigned int> libmaus2::util::KMP::PREFIX_SEARCH_INTERNAL_RESTRICTED(const_iterator_x, uint64_t, pi_type&, const_iterator_y&, uint64_t, uint64_t, bool) [with const_iterator_x = libmaus2::util::KMP::BestPrefix<std::basic_istream<char> >::BestPrefixXAdapter; const_iterator_y = libmaus2::aio::Lz4CircularWrapper; pi_type = libmaus2::util::KMP::BestPrefix<std::basic_istream<char> >]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘static std::pair<long long unsigned int, long long unsigned int> libmaus2::util::KMP::PREFIX_SEARCH_INTERNAL_RESTRICTED(const_iterator_x, uint64_t, pi_type&, const_iterator_y&, uint64_t, uint64_t, bool) [with const_iterator_x = libmaus2::util::KMP::BestPrefix<std::basic_istream<char> >::BestPrefixXAdapter; const_iterator_y = libmaus2::aio::CircularWrapper; pi_type = libmaus2::util::KMP::BestPrefix<std::basic_istream<char> >]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘static std::pair<long long unsigned int, long long unsigned int> libmaus2::util::KMP::PREFIX_SEARCH_INTERNAL_RESTRICTED(const_iterator_x, uint64_t, pi_type&, const_iterator_y&, uint64_t, uint64_t, bool) [with const_iterator_x = libmaus2::util::KMP::BestPrefix<std::basic_istream<char> >::BestPrefixXAdapter; const_iterator_y = libmaus2::aio::PacTermCircularWrapper; pi_type = libmaus2::util::KMP::BestPrefix<std::basic_istream<char> >]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘static std::pair<long long unsigned int, long long unsigned int> libmaus2::util::KMP::PREFIX_SEARCH_INTERNAL_RESTRICTED(const_iterator_x, uint64_t, pi_type&, const_iterator_y&, uint64_t, uint64_t, bool) [with const_iterator_x = libmaus2::util::KMP::BestPrefix<std::basic_istream<char> >::BestPrefixXAdapter; const_iterator_y = libmaus2::aio::CompactCircularWrapper; pi_type = libmaus2::util::KMP::BestPrefix<std::basic_istream<char> >]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘static std::pair<long long unsigned int, long long unsigned int> libmaus2::util::KMP::PREFIX_SEARCH_INTERNAL_RESTRICTED(const_iterator_x, uint64_t, pi_type&, const_iterator_y&, uint64_t, uint64_t, bool) [with const_iterator_x = libmaus2::util::KMP::BestPrefix<std::basic_istream<char> >::BestPrefixXAdapter; const_iterator_y = libmaus2::aio::PacCircularWrapper; pi_type = libmaus2::util::KMP::BestPrefix<std::basic_istream<char> >]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::util::KMP::BestPrefix<stream_type>::BestPrefix(stream_type&, uint64_t) [with stream_type = std::basic_istream<wchar_t>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘int64_t libmaus2::util::KMP::BestPrefix<stream_type>::operator[](uint64_t) [with stream_type = std::basic_istream<wchar_t>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static uint64_t libmaus2::suffixsort::BwtMergeBlockSortRequestBase::findSplitCommonBounded(const string&, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t) [with input_types_type = libmaus2::suffixsort::Utf8InputTypes<32>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:41,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
105 | }
| ^
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In function ‘_ZN8libmaus210suffixsort6bwtb3m20BwtMergeSortTemplateINS0_14Utf8InputTypesILj32EEEE10computeBwtERKNS1_19BwtMergeSortOptionsEPSo._omp_fn.1’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static uint64_t libmaus2::suffixsort::BwtMergeBlockSortRequestBase::findSplitCommonBounded(const string&, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t) [with input_types_type = libmaus2::suffixsort::Utf8InputTypes<64>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:41,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
105 | }
| ^
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
./libmaus2/suffixsort/BwtMergeBlockSortRequestBase.hpp:105:4: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In function ‘_ZN8libmaus210suffixsort6bwtb3m20BwtMergeSortTemplateINS0_14Utf8InputTypesILj64EEEE10computeBwtERKNS1_19BwtMergeSortOptionsEPSo._omp_fn.1’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘static std::pair<long long unsigned int, long long unsigned int> libmaus2::util::KMP::PREFIX_SEARCH_INTERNAL_RESTRICTED(const_iterator_x, uint64_t, pi_type&, const_iterator_y&, uint64_t, uint64_t, bool) [with const_iterator_x = libmaus2::util::KMP::BestPrefix<std::basic_istream<wchar_t> >::BestPrefixXAdapter; const_iterator_y = libmaus2::aio::Utf8CircularWrapperWrapper; pi_type = libmaus2::util::KMP::BestPrefix<std::basic_istream<wchar_t> >]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:26,
from ./libmaus2/lf/ImpCompactHuffmanWaveletLF.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
./libmaus2/huffman/HuffmanTree.hpp: In constructor ‘libmaus2::huffman::HuffmanTree::HuffmanTree(iterator, uint64_t, bool, bool, bool) [with iterator = std::_Rb_tree_iterator<std::pair<const long long int, long long unsigned int> >]’:
./libmaus2/huffman/HuffmanTree.hpp:643:4: note: parameter passing for argument of type ‘std::_Rb_tree_iterator<std::pair<const long long int, long long unsigned int> >’ changed in GCC 7.1
643 | HuffmanTree(iterator F, uint64_t const s, bool const sortbydepth = false, bool const rsetcode = false, bool const rdfsorder = false)
| ^~~~~~~~~~~
In file included from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
./libmaus2/autoarray/AutoArray.hpp: In constructor ‘libmaus2::autoarray::AutoArray<N, atype, erase_type>::AutoArray(uint64_t, bool) [with N = libmaus2::suffixsort::GapMergePacket; libmaus2::autoarray::alloc_type atype = libmaus2::autoarray::alloc_type_cxx; erase_type = libmaus2::autoarray::ArrayErase<libmaus2::suffixsort::GapMergePacket>]’:
./libmaus2/autoarray/AutoArray.hpp:1132:5: warning: ‘<anonymous>’ may be used uninitialized in this function [-Wmaybe-uninitialized]
1132 | array[i] = N();
| ^~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::genericInputControlBlockCompressionFinished(libmaus2::bambam::parallel::GenericInputControlCompressionPending) [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryCoordinate]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::GenericInputControlCompressionPending*, std::vector<libmaus2::bambam::parallel::GenericInputControlCompressionPending> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::bambam::parallel::BlockMergeControl<libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryCoordinate>::_ZThn60_N8libmaus26bambam8parallel17BlockMergeControlINS1_43GenericInputControlMergeHeapEntryCoordinateEE43genericInputControlBlockCompressionFinishedENS1_37GenericInputControlCompressionPendingE(libmaus2::bambam::parallel::GenericInputControlCompressionPending)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::GenericInputControlCompressionPending*, std::vector<libmaus2::bambam::parallel::GenericInputControlCompressionPending> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::genericInputControlBlockCompressionFinished(libmaus2::bambam::parallel::GenericInputControlCompressionPending) [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryQueryName]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::GenericInputControlCompressionPending*, std::vector<libmaus2::bambam::parallel::GenericInputControlCompressionPending> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::bambam::parallel::BlockMergeControl<libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryQueryName>::_ZThn60_N8libmaus26bambam8parallel17BlockMergeControlINS1_42GenericInputControlMergeHeapEntryQueryNameEE43genericInputControlBlockCompressionFinishedENS1_37GenericInputControlCompressionPendingE(libmaus2::bambam::parallel::GenericInputControlCompressionPending)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::GenericInputControlCompressionPending*, std::vector<libmaus2::bambam::parallel::GenericInputControlCompressionPending> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::parallel::BlockSortControl<_order_type, _create_dup_mark_info>::samParseDecompressedBlockFinished(uint64_t, libmaus2::bambam::parallel::DecompressedBlock::shared_ptr_type) [with _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferPosComparator; bool _create_dup_mark_info = true]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::DecompressedPendingObject*, std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::parallel::BlockSortControl<_order_type, _create_dup_mark_info>::putDecompressedBlockAddPending(libmaus2::bambam::parallel::DecompressedBlock::shared_ptr_type) [with _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferPosComparator; bool _create_dup_mark_info = true]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::DecompressedPendingObject*, std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::parallel::BlockSortControl<_order_type, _create_dup_mark_info>::genericInputBgzfDecompressionWorkPackageDecompressedBlockReturn(uint64_t, libmaus2::bambam::parallel::DecompressedBlock::shared_ptr_type) [with _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferPosComparator; bool _create_dup_mark_info = true]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::DecompressedPendingObject*, std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::bambam::parallel::BlockSortControl<libmaus2::bambam::parallel::FragmentAlignmentBufferPosComparator, true>::_ZThn24_N8libmaus26bambam8parallel16BlockSortControlINS1_36FragmentAlignmentBufferPosComparatorELb1EE30putDecompressedBlockAddPendingESt10shared_ptrINS1_17DecompressedBlockEE(libmaus2::bambam::parallel::DecompressedBlock::shared_ptr_type)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::DecompressedPendingObject*, std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::bambam::parallel::BlockSortControl<libmaus2::bambam::parallel::FragmentAlignmentBufferPosComparator, true>::_ZThn160_N8libmaus26bambam8parallel16BlockSortControlINS1_36FragmentAlignmentBufferPosComparatorELb1EE33samParseDecompressedBlockFinishedEySt10shared_ptrINS1_17DecompressedBlockEE(uint64_t, libmaus2::bambam::parallel::DecompressedBlock::shared_ptr_type)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::DecompressedPendingObject*, std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::parallel::BlockSortControl<_order_type, _create_dup_mark_info>::samParseDecompressedBlockFinished(uint64_t, libmaus2::bambam::parallel::DecompressedBlock::shared_ptr_type) [with _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferQueryNameComparator; bool _create_dup_mark_info = false]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::DecompressedPendingObject*, std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::parallel::BlockSortControl<_order_type, _create_dup_mark_info>::putDecompressedBlockAddPending(libmaus2::bambam::parallel::DecompressedBlock::shared_ptr_type) [with _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferQueryNameComparator; bool _create_dup_mark_info = false]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::DecompressedPendingObject*, std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::parallel::BlockSortControl<_order_type, _create_dup_mark_info>::genericInputBgzfDecompressionWorkPackageDecompressedBlockReturn(uint64_t, libmaus2::bambam::parallel::DecompressedBlock::shared_ptr_type) [with _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferQueryNameComparator; bool _create_dup_mark_info = false]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::DecompressedPendingObject*, std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::bambam::parallel::BlockSortControl<libmaus2::bambam::parallel::FragmentAlignmentBufferQueryNameComparator, false>::_ZThn24_N8libmaus26bambam8parallel16BlockSortControlINS1_42FragmentAlignmentBufferQueryNameComparatorELb0EE30putDecompressedBlockAddPendingESt10shared_ptrINS1_17DecompressedBlockEE(libmaus2::bambam::parallel::DecompressedBlock::shared_ptr_type)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::DecompressedPendingObject*, std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::bambam::parallel::BlockSortControl<libmaus2::bambam::parallel::FragmentAlignmentBufferQueryNameComparator, false>::_ZThn160_N8libmaus26bambam8parallel16BlockSortControlINS1_42FragmentAlignmentBufferQueryNameComparatorELb0EE33samParseDecompressedBlockFinishedEySt10shared_ptrINS1_17DecompressedBlockEE(uint64_t, libmaus2::bambam::parallel::DecompressedBlock::shared_ptr_type)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::DecompressedPendingObject*, std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::parallel::BlockSortControl<_order_type, _create_dup_mark_info>::checkInputBlockPending(uint64_t) [with _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferPosComparator; bool _create_dup_mark_info = true]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::GenericInputControlSubBlockPending*, std::vector<libmaus2::bambam::parallel::GenericInputControlSubBlockPending> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::parallel::BlockSortControl<_order_type, _create_dup_mark_info>::checkInputBlockPending(uint64_t) [with _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferQueryNameComparator; bool _create_dup_mark_info = false]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::GenericInputControlSubBlockPending*, std::vector<libmaus2::bambam::parallel::GenericInputControlSubBlockPending> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::bambam::parallel::BlockSortControl<_order_type, _create_dup_mark_info>::checkPostSortPendingQueue() [with _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferPosComparator; bool _create_dup_mark_info = true]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘void libmaus2::bambam::parallel::BlockSortControl<_order_type, _create_dup_mark_info>::smallLinearBlockCompressionPendingObjectFinished(const libmaus2::bambam::parallel::SmallLinearBlockCompressionPendingObject&) [with _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferPosComparator; bool _create_dup_mark_info = true]’:
/usr/include/c++/10/bits/stl_tree.h:1216:14: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > > >::const_iterator’ changed in GCC 7.1
1216 | _M_erase_aux(__position);
| ~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::bambam::parallel::BlockSortControl<_order_type, _create_dup_mark_info>::checkPostSortPendingQueue() [with _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferQueryNameComparator; bool _create_dup_mark_info = false]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘void libmaus2::bambam::parallel::BlockSortControl<_order_type, _create_dup_mark_info>::smallLinearBlockCompressionPendingObjectFinished(const libmaus2::bambam::parallel::SmallLinearBlockCompressionPendingObject&) [with _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferQueryNameComparator; bool _create_dup_mark_info = false]’:
/usr/include/c++/10/bits/stl_tree.h:1216:14: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > > >::const_iterator’ changed in GCC 7.1
1216 | _M_erase_aux(__position);
| ~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::bambam::parallel::BlockSortControl<_order_type, _create_dup_mark_info>::checkLargeBlockCompressionPending() [with _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferPosComparator; bool _create_dup_mark_info = true]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::SmallLinearBlockCompressionPendingObject*, std::vector<libmaus2::bambam::parallel::SmallLinearBlockCompressionPendingObject> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::bambam::parallel::BlockSortControl<_order_type, _create_dup_mark_info>::checkLargeBlockCompressionPending() [with _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferQueryNameComparator; bool _create_dup_mark_info = false]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::SmallLinearBlockCompressionPendingObject*, std::vector<libmaus2::bambam::parallel::SmallLinearBlockCompressionPendingObject> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::parallel::BlockSortControl<_order_type, _create_dup_mark_info>::bgzfOutputBlockWritten(uint64_t, int64_t, uint64_t, uint64_t) [with _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferPosComparator; bool _create_dup_mark_info = true]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::parallel::BlockSortControl<_order_type, _create_dup_mark_info>::addWritePendingBgzfBlock(int64_t, int64_t, libmaus2::lz::BgzfDeflateOutputBufferBase::shared_ptr_type, const libmaus2::lz::BgzfDeflateZStreamBaseFlushInfo&) [with _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferPosComparator; bool _create_dup_mark_info = true]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::WritePendingObject*, std::vector<libmaus2::bambam::parallel::WritePendingObject> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::parallel::BlockSortControl<_order_type, _create_dup_mark_info>::bgzfOutputBlockWritten(uint64_t, int64_t, uint64_t, uint64_t) [with _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferQueryNameComparator; bool _create_dup_mark_info = false]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::parallel::BlockSortControl<_order_type, _create_dup_mark_info>::addWritePendingBgzfBlock(int64_t, int64_t, libmaus2::lz::BgzfDeflateOutputBufferBase::shared_ptr_type, const libmaus2::lz::BgzfDeflateZStreamBaseFlushInfo&) [with _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferQueryNameComparator; bool _create_dup_mark_info = false]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::WritePendingObject*, std::vector<libmaus2::bambam::parallel::WritePendingObject> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::bambam::parallel::BlockSortControl<_order_type, _create_dup_mark_info>::validateBlockFragmentFinished(libmaus2::bambam::parallel::ValidationFragment&, bool) [with _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferPosComparator; bool _create_dup_mark_info = true]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, bool>, std::_Select1st<std::pair<const long long unsigned int, bool> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, bool> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, bool>, std::_Select1st<std::pair<const long long unsigned int, bool> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, bool> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘void libmaus2::bambam::parallel::BlockSortControl<_order_type, _create_dup_mark_info>::fragmentAlignmentBufferReorderWorkPackageFinished(libmaus2::bambam::parallel::FragmentAlignmentBufferReorderWorkPackage*) [with _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferPosComparator; bool _create_dup_mark_info = true]’:
/usr/include/c++/10/bits/stl_tree.h:1216:14: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > > >::const_iterator’ changed in GCC 7.1
1216 | _M_erase_aux(__position);
| ~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h:1216:14: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > > >::const_iterator’ changed in GCC 7.1
1216 | _M_erase_aux(__position);
| ~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::bambam::parallel::BlockSortControl<_order_type, _create_dup_mark_info>::validateBlockFragmentFinished(libmaus2::bambam::parallel::ValidationFragment&, bool) [with _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferQueryNameComparator; bool _create_dup_mark_info = false]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, bool>, std::_Select1st<std::pair<const long long unsigned int, bool> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, bool> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, bool>, std::_Select1st<std::pair<const long long unsigned int, bool> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, bool> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘void libmaus2::bambam::parallel::BlockSortControl<_order_type, _create_dup_mark_info>::fragmentAlignmentBufferReorderWorkPackageFinished(libmaus2::bambam::parallel::FragmentAlignmentBufferReorderWorkPackage*) [with _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferQueryNameComparator; bool _create_dup_mark_info = false]’:
/usr/include/c++/10/bits/stl_tree.h:1216:14: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > > >::const_iterator’ changed in GCC 7.1
1216 | _M_erase_aux(__position);
| ~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h:1216:14: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > > >::const_iterator’ changed in GCC 7.1
1216 | _M_erase_aux(__position);
| ~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘void libmaus2::bambam::parallel::BlockSortControl<_order_type, _create_dup_mark_info>::fragmentAlignmentBufferRewriteFragmentComplete(libmaus2::bambam::parallel::AlignmentBuffer::shared_ptr_type&, libmaus2::bambam::parallel::FragmentAlignmentBuffer::shared_ptr_type&, uint64_t) [with _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferPosComparator; bool _create_dup_mark_info = true]’:
/usr/include/c++/10/bits/stl_tree.h:1216:14: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > > >::const_iterator’ changed in GCC 7.1
1216 | _M_erase_aux(__position);
| ~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h:1216:14: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
1216 | _M_erase_aux(__position);
| ~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In member function ‘void libmaus2::bambam::parallel::BlockSortControl<_order_type, _create_dup_mark_info>::fragmentAlignmentBufferRewriteFragmentComplete(libmaus2::bambam::parallel::AlignmentBuffer::shared_ptr_type&, libmaus2::bambam::parallel::FragmentAlignmentBuffer::shared_ptr_type&, uint64_t) [with _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferQueryNameComparator; bool _create_dup_mark_info = false]’:
/usr/include/c++/10/bits/stl_tree.h:1216:14: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > > >::const_iterator’ changed in GCC 7.1
1216 | _M_erase_aux(__position);
| ~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h:1216:14: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
1216 | _M_erase_aux(__position);
| ~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::checkCompressionPending() [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryCoordinate]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::GenericInputControlCompressionPending*, std::vector<libmaus2::bambam::parallel::GenericInputControlCompressionPending> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::checkCompressionPending() [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryQueryName]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::GenericInputControlCompressionPending*, std::vector<libmaus2::bambam::parallel::GenericInputControlCompressionPending> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::checkRewriteReorderQueue() [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryCoordinate]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::CramPassPointerObject> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::CramPassPointerObject> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::CramPassPointerObject> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::CramPassPointerObject> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::CramPassPointerObject> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::CramPassPointerObject> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >, std::_Select1st<std::pair<const long long int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >, std::less<long long int>, std::allocator<std::pair<const long long int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::checkRewriteReorderQueue() [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryQueryName]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::CramPassPointerObject> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::CramPassPointerObject> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::CramPassPointerObject> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::CramPassPointerObject> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::CramPassPointerObject> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::CramPassPointerObject> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >, std::_Select1st<std::pair<const long long int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >, std::less<long long int>, std::allocator<std::pair<const long long int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/stacktrace/StackTrace.hpp:33,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:31,
from ./libmaus2/aio/Buffer.hpp:22,
from ./libmaus2/bambam/BamNumericalIndexGenerator.hpp:22,
from ./libmaus2/bambam/parallel/BlockMergeControl.hpp:24,
from test/testparallelbamblocksort.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::sorting::ParallelStableSort::MergeLevel<_iterator, _order_type>::dispatch() [with _iterator = unsigned char**; _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferQueryNameComparator]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::sorting::ParallelStableSort::MergeLevel<_iterator, _order_type>::dispatch() [with _iterator = unsigned char**; _order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferPosComparator]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_erase_aux(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator) [with _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2510:5: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
2510 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In function ‘_ZN8libmaus25gamma39SparseGammaGapMultiFileLevelSetTemplateIyE12mergeToDenseERNS_4util21TempFileNameGeneratorEyy._omp_fn.0’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::huffman::RLEncoderBaseTemplate<_bit_writer_type>::implicitFlush() [with _bit_writer_type = libmaus2::huffman::HuffmanEncoderFileTemplate<libmaus2::aio::SynchronousGenericOutput<unsigned char>, libmaus2::bitio::FastWriteBitWriterTemplate<unsigned char, libmaus2::aio::PutOutputIterator<unsigned char, libmaus2::aio::SynchronousGenericOutput<unsigned char> >, 128, 255, false> >]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > > >::const_iterator’ changed in GCC 7.1
2193 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::gamma::SparseGammaGapMultiFile&}; _Tp = libmaus2::gamma::SparseGammaGapMultiFile; _Alloc = std::allocator<libmaus2::gamma::SparseGammaGapMultiFile>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In member function ‘bool libmaus2::gamma::SparseGammaGapMultiFileLevelSetTemplate<_data_type>::checkMergePacket(uint64_t&, uint64_t&) [with _data_type = long long unsigned int]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In function ‘_ZN8libmaus25gamma39SparseGammaGapMultiFileLevelSetTemplateIyE5mergeERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEy._omp_fn.0’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In member function ‘typename libmaus2::gamma::SparseGammaGapMergeTemplate<_data_type>::SparseGammaGapMergeInfo* libmaus2::gamma::SparseGammaGapMultiFileLevelSetTemplate<_data_type>::queueMergeInfo(const libmaus2::gamma::SparseGammaGapMultiFile&, const libmaus2::gamma::SparseGammaGapMultiFile&) [with _data_type = long long unsigned int]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::suffixsort::GapArrayByte::flush()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘std::vector<std::__cxx11::basic_string<char> > libmaus2::gamma::SparseGammaGapMultiFileLevelSetTemplate<_data_type>::merge(const string&, uint64_t) [with _data_type = long long unsigned int]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = true; bool keepsecond = true]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = true; bool keepsecond = false]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = false; bool keepsecond = true]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = true; bool keepsecond = true]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = true; bool keepsecond = false]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = false; bool keepsecond = true]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = false; bool keepsecond = false]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static void libmaus2::sorting::PairFileSorting::sortPairFileTemplate(const std::vector<std::__cxx11::basic_string<char> >&, const string&, bool, bool, bool, out_type&, uint64_t, uint64_t, bool, uint64_t, std::ostream*) [with out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/huffman/IndexWriter.hpp:22,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In static member function ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeBwt(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with input_types_type = libmaus2::suffixsort::Utf8InputTypes<64>]’:
/usr/include/c++/10/bits/stl_algo.h:4861:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
4861 | std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter());
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:4808:61: note: parameter passing for argument of type ‘std::map<long long int, long long unsigned int>::iterator’ {aka ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::iterator’} changed in GCC 7.1
4808 | libmaus2::huffman::HuffmanTree::unique_ptr_type uhnode(new libmaus2::huffman::HuffmanTree(chist.begin(),chist.size(),false,true,true));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In static member function ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeBwt(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with input_types_type = libmaus2::suffixsort::Lz4InputTypes<64>]’:
/usr/include/c++/10/bits/stl_algo.h:4861:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
4861 | std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter());
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:4808:61: note: parameter passing for argument of type ‘std::map<long long int, long long unsigned int>::iterator’ {aka ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::iterator’} changed in GCC 7.1
4808 | libmaus2::huffman::HuffmanTree::unique_ptr_type uhnode(new libmaus2::huffman::HuffmanTree(chist.begin(),chist.size(),false,true,true));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In static member function ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeBwt(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with input_types_type = libmaus2::suffixsort::PacTermInputTypes<64>]’:
/usr/include/c++/10/bits/stl_algo.h:4861:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
4861 | std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter());
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:4808:61: note: parameter passing for argument of type ‘std::map<long long int, long long unsigned int>::iterator’ {aka ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::iterator’} changed in GCC 7.1
4808 | libmaus2::huffman::HuffmanTree::unique_ptr_type uhnode(new libmaus2::huffman::HuffmanTree(chist.begin(),chist.size(),false,true,true));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In static member function ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeBwt(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with input_types_type = libmaus2::suffixsort::PacInputTypes<64>]’:
/usr/include/c++/10/bits/stl_algo.h:4861:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
4861 | std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter());
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:4808:61: note: parameter passing for argument of type ‘std::map<long long int, long long unsigned int>::iterator’ {aka ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::iterator’} changed in GCC 7.1
4808 | libmaus2::huffman::HuffmanTree::unique_ptr_type uhnode(new libmaus2::huffman::HuffmanTree(chist.begin(),chist.size(),false,true,true));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In static member function ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeBwt(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with input_types_type = libmaus2::suffixsort::CompactInputTypes<64>]’:
/usr/include/c++/10/bits/stl_algo.h:4861:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
4861 | std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter());
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:4808:61: note: parameter passing for argument of type ‘std::map<long long int, long long unsigned int>::iterator’ {aka ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::iterator’} changed in GCC 7.1
4808 | libmaus2::huffman::HuffmanTree::unique_ptr_type uhnode(new libmaus2::huffman::HuffmanTree(chist.begin(),chist.size(),false,true,true));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In static member function ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeBwt(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<64>]’:
/usr/include/c++/10/bits/stl_algo.h:4861:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
4861 | std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter());
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:4808:61: note: parameter passing for argument of type ‘std::map<long long int, long long unsigned int>::iterator’ {aka ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::iterator’} changed in GCC 7.1
4808 | libmaus2::huffman::HuffmanTree::unique_ptr_type uhnode(new libmaus2::huffman::HuffmanTree(chist.begin(),chist.size(),false,true,true));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In static member function ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeBwt(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with input_types_type = libmaus2::suffixsort::Utf8InputTypes<32>]’:
/usr/include/c++/10/bits/stl_algo.h:4861:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
4861 | std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter());
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:4808:61: note: parameter passing for argument of type ‘std::map<long long int, long long unsigned int>::iterator’ {aka ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::iterator’} changed in GCC 7.1
4808 | libmaus2::huffman::HuffmanTree::unique_ptr_type uhnode(new libmaus2::huffman::HuffmanTree(chist.begin(),chist.size(),false,true,true));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In static member function ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeBwt(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with input_types_type = libmaus2::suffixsort::Lz4InputTypes<32>]’:
/usr/include/c++/10/bits/stl_algo.h:4861:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
4861 | std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter());
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:4808:61: note: parameter passing for argument of type ‘std::map<long long int, long long unsigned int>::iterator’ {aka ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::iterator’} changed in GCC 7.1
4808 | libmaus2::huffman::HuffmanTree::unique_ptr_type uhnode(new libmaus2::huffman::HuffmanTree(chist.begin(),chist.size(),false,true,true));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In static member function ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeBwt(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with input_types_type = libmaus2::suffixsort::PacTermInputTypes<32>]’:
/usr/include/c++/10/bits/stl_algo.h:4861:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
4861 | std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter());
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:4808:61: note: parameter passing for argument of type ‘std::map<long long int, long long unsigned int>::iterator’ {aka ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::iterator’} changed in GCC 7.1
4808 | libmaus2::huffman::HuffmanTree::unique_ptr_type uhnode(new libmaus2::huffman::HuffmanTree(chist.begin(),chist.size(),false,true,true));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In static member function ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeBwt(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with input_types_type = libmaus2::suffixsort::PacInputTypes<32>]’:
/usr/include/c++/10/bits/stl_algo.h:4861:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
4861 | std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter());
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:4808:61: note: parameter passing for argument of type ‘std::map<long long int, long long unsigned int>::iterator’ {aka ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::iterator’} changed in GCC 7.1
4808 | libmaus2::huffman::HuffmanTree::unique_ptr_type uhnode(new libmaus2::huffman::HuffmanTree(chist.begin(),chist.size(),false,true,true));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In static member function ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeBwt(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with input_types_type = libmaus2::suffixsort::CompactInputTypes<32>]’:
/usr/include/c++/10/bits/stl_algo.h:4861:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
4861 | std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter());
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:4808:61: note: parameter passing for argument of type ‘std::map<long long int, long long unsigned int>::iterator’ {aka ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::iterator’} changed in GCC 7.1
4808 | libmaus2::huffman::HuffmanTree::unique_ptr_type uhnode(new libmaus2::huffman::HuffmanTree(chist.begin(),chist.size(),false,true,true));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:35,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In static member function ‘static libmaus2::suffixsort::bwtb3m::BwtMergeSortResult libmaus2::suffixsort::bwtb3m::BwtMergeSortTemplate<input_types_type>::computeBwt(const libmaus2::suffixsort::bwtb3m::BwtMergeSortOptions&, std::ostream*) [with input_types_type = libmaus2::suffixsort::ByteInputTypes<32>]’:
/usr/include/c++/10/bits/stl_algo.h:4861:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
4861 | std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter());
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:4808:61: note: parameter passing for argument of type ‘std::map<long long int, long long unsigned int>::iterator’ {aka ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::iterator’} changed in GCC 7.1
4808 | libmaus2::huffman::HuffmanTree::unique_ptr_type uhnode(new libmaus2::huffman::HuffmanTree(chist.begin(),chist.size(),false,true,true));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<long long unsigned int&&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::gamma::SparseGammaGapMultiFileLevelSetTemplate<_data_type>::putFile(const std::vector<std::__cxx11::basic_string<char> >&) [with _data_type = long long unsigned int]’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:47,
from ./libmaus2/math/numbits.hpp:24,
from ./libmaus2/huffman/IndexWriter.hpp:24,
from ./libmaus2/huffman/RLEncoder.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BWTB3MBase.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortTemplate.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSort.hpp:22,
from libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In function ‘void libmaus2::gamma::SparseGammaGapMultiFileLevelSetTemplate<_data_type>::checkMergeSingle(bool) [with _data_type = long long unsigned int]’:
/usr/include/c++/10/bits/stl_tree.h:1216:14: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
1216 | _M_erase_aux(__position);
| ~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h:1216:14: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
1216 | _M_erase_aux(__position);
| ~~~~~~~~~~~~^~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtMergeSort.cpp -o libmaus2/suffixsort/bwtb3m/la-BwtMergeSort.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=link g++ -std=c++17 -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -Wl,-z,relro -version-info 2:768:0 -L/lib -Wl,-z,relro -rdynamic -o libmaus2.la -rpath /usr/lib/arm-linux-gnueabihf libmaus2/la-StaticInitialization.lo libmaus2/bitio/la-CompactArray.lo libmaus2/rank/la-RankTable.lo libmaus2/rank/la-log2table.lo libmaus2/fastx/la-isFastQ.lo libmaus2/wavelet/la-toWaveletTreeBits.lo libmaus2/suffixsort/la-divsufsort.lo libmaus2/digest/la-md5.lo libmaus2/math/la-primes16.lo libmaus2/util/la-OutputFileNameTools.lo libmaus2/select/la-ESelectBase.lo libmaus2/bambam/la-CigarStringParser.lo libmaus2/fastx/la-Phred.lo libmaus2/lz/la-SnappyCompress.lo libmaus2/bambam/la-ReadEndsContainer.lo libmaus2/bambam/la-ReadEnds.lo libmaus2/huffman/la-IndexLoaderBase.lo libmaus2/bambam/la-BamAlignmentDecoderBase.lo libmaus2/bambam/la-StrCmpNum.lo libmaus2/huffman/la-KvInitResult.lo libmaus2/fm/la-MausFmToBwaConversion.lo libmaus2/util/la-TempFileNameGenerator.lo libmaus2/util/la-TempFileNameGeneratorState.lo libmaus2/util/la-ArgInfo.lo libmaus2/util/la-BitList.lo libmaus2/util/la-VarBitList.lo libmaus2/util/la-Concat.lo libmaus2/util/la-ConcatRequest.lo libmaus2/util/la-ConsoleColor.lo libmaus2/util/la-DynamicLoading.lo libmaus2/util/la-GetFileSize.lo libmaus2/util/la-Histogram.lo libmaus2/util/la-HistogramSet.lo libmaus2/util/la-IncreasingList.lo libmaus2/util/la-IntervalTree.lo libmaus2/util/la-GenericIntervalTree.lo libmaus2/util/la-LookupIntervalTree.lo libmaus2/digest/la-md5_interface.lo libmaus2/util/la-MemUsage.lo libmaus2/util/la-nstat.lo libmaus2/util/la-SaturatingCounter.lo libmaus2/util/la-StringSerialisation.lo libmaus2/util/la-SuccinctBorderArray.lo libmaus2/util/la-Terminal.lo libmaus2/util/la-OctetString.lo libmaus2/util/la-Utf8String.lo libmaus2/util/la-Utf8BlockIndexDecoder.lo libmaus2/util/la-Utf8BlockIndex.lo libmaus2/util/la-Utf8DecoderBuffer.lo libmaus2/util/la-Utf8DecoderWrapper.lo libmaus2/suffixtree/la-CompressedSuffixTree.lo libmaus2/bambam/la-AlignmentValidity.lo libmaus2/bambam/la-BamFlagBase.lo libmaus2/bambam/la-ReadGroup.lo libmaus2/bambam/la-DuplicationMetrics.lo libmaus2/bambam/la-BamDefaultAdapters.lo libmaus2/bambam/la-BamRange.lo libmaus2/bambam/la-BamIndexBinChunk.lo libmaus2/bambam/la-BamIndexLinearChunk.lo libmaus2/huffman/la-HuffmanTree.lo libmaus2/bambam/la-BamAlignmentDecoderInfo.lo libmaus2/lz/la-Lz4Base.lo libmaus2/lz/la-Lz4Compress.lo libmaus2/lz/la-Lz4DecoderBuffer.lo libmaus2/lz/la-lz4.lo libmaus2/fm/la-BidirectionalIndexInterval.lo libmaus2/fm/la-BidirectionalIndexIntervalSymbol.lo libmaus2/gamma/la-SparseGammaGapFileIndexDecoderEntry.lo libmaus2/fastx/la-FastALineParserLineInfo.lo libmaus2/fastx/la-FastAMatchTable.lo libmaus2/lcs/la-EditDistanceResult.lo libmaus2/fastx/la-FastABgzfIndexEntry.lo libmaus2/fastx/la-FastABgzfIndex.lo libmaus2/fastx/la-FastAIndexEntry.lo libmaus2/fastx/la-FastAIndex.lo libmaus2/hashing/la-Crc32.lo libmaus2/hashing/la-MurmurHash3.lo libmaus2/lcs/la-LocalBaseConstants.lo libmaus2/lcs/la-LocalEditDistanceResult.lo libmaus2/bambam/la-BamHeaderParserStateBase.lo libmaus2/bambam/la-GeneFlatFile.lo libmaus2/bambam/la-GeneFlatFileEntry.lo libmaus2/trie/la-SimpleTrie.lo libmaus2/bambam/la-BamStreamingMarkDuplicatesSupport.lo libmaus2/alignment/la-FactorMatchInfo.lo libmaus2/alignment/la-KmerInfo.lo libmaus2/bambam/la-SamInfoBase.lo libmaus2/digest/la-SHA1.lo libmaus2/digest/la-SHA2_224.lo libmaus2/digest/la-SHA2_256.lo libmaus2/digest/la-SHA2_384.lo libmaus2/digest/la-SHA2_512.lo libmaus2/digest/la-CRC32.lo libmaus2/digest/la-CRC32C_Core.lo libmaus2/digest/la-CRC32C.lo libmaus2/digest/la-CRC32_Core.lo libmaus2/bambam/parallel/la-ValidationFragment.lo libmaus2/bambam/parallel/la-GenericInputControlStreamInfo.lo libmaus2/fastx/la-NameInfoBase.lo libmaus2/bambam/parallel/la-RefIdInterval.lo libmaus2/fastx/la-RefPathToken.lo libmaus2/fastx/la-RefPathTokenVector.lo libmaus2/dazzler/db/la-FastaInfo.lo libmaus2/dazzler/db/la-IndexBase.lo libmaus2/dazzler/db/la-DatabaseFile.lo libmaus2/dazzler/db/la-Read.lo libmaus2/dazzler/align/la-Path.lo libmaus2/dazzler/align/la-Overlap.lo libmaus2/lcs/la-AlignmentStatistics.lo libmaus2/fastx/la-SingleWordDNABitBuffer.lo libmaus2/util/la-LongestIncreasingSubsequenceExtendedResult.lo libmaus2/lcs/la-AlignerFactory.lo libmaus2/lcs/la-BandedAlignerFactory.lo libmaus2/aio/la-InputStreamInstance.lo libmaus2/aio/la-OutputStreamInstance.lo libmaus2/aio/la-OutputStreamFactoryContainer.lo libmaus2/dazzler/align/la-TraceBlock.lo libmaus2/dazzler/align/la-ApproximateRun.lo libmaus2/suffixsort/la-BwtMergeBlockSortRequest.lo libmaus2/dazzler/align/la-OverlapMeta.lo libmaus2/dazzler/align/la-Tandem.lo libmaus2/dazzler/align/la-TandemVector.lo libmaus2/math/la-GmpInteger.lo libmaus2/math/la-GmpFloat.lo libmaus2/dazzler/align/la-TracePoint.lo libmaus2/lz/la-XzDecoder.lo libmaus2/util/la-ArgParser.lo libmaus2/fastx/la-DNAIndexMetaDataSequence.lo libmaus2/fastx/la-DNAIndexMetaData.lo libmaus2/bambam/la-PileVectorElement.lo libmaus2/bambam/la-PileQualityVectorElement.lo libmaus2/digest/la-SHA3_256.lo libmaus2/fastx/la-DNAIndexMetaDataBigBand.lo libmaus2/fastx/la-DNAIndexMetaDataBigBandBiDir.lo libmaus2/rank/la-DNARankBiDirRange.lo libmaus2/lcs/la-NNPTraceElement.lo libmaus2/lcs/la-NNPTraceContainer.lo libmaus2/lcs/la-NNPAlignResult.lo libmaus2/suffixsort/bwtb3m/la-MergeStrategyMergeGapRequest.lo libmaus2/suffixsort/bwtb3m/la-BwtMergeSort.lo libmaus2/suffixsort/bwtb3m/la-BwtComputeSSA.lo libmaus2/fastx/la-FastAToCompact4BigBand.lo libmaus2/suffixsort/bwtb3m/la-BwtMergeSortResult.lo libmaus2/lz/la-ZlibInterface.lo libmaus2/suffixsort/bwtb3m/la-BwtSelectSSA.lo libmaus2/aio/la-FileRemoval.lo libmaus2/rank/la-DNARankMEM.lo libmaus2/lcs/la-ChainAddQueueElement.lo libmaus2/lcs/la-Chain.lo libmaus2/lcs/la-ChainNode.lo libmaus2/lcs/la-ChainNodeInfo.lo libmaus2/lcs/la-ChainRemoveQueueElement.lo libmaus2/lcs/la-ChainSplayTreeNode.lo libmaus2/timing/la-RealTimeClock.lo libmaus2/aio/la-PosixFdOutputStreamFactory.lo libmaus2/dazzler/align/la-OverlapHeader.lo libmaus2/bambam/la-BamAlignment.lo libmaus2/suffixsort/bwtb3m/la-MergeStrategyMergeInput.lo libmaus2/aio/la-InputOutputStreamInstance.lo libmaus2/dazzler/align/la-OverlapInfo.lo libmaus2/dazzler/align/la-OverlapDataInterface.lo libmaus2/util/la-PathTools.lo libmaus2/aio/la-OFStreamOutputStreamFactory.lo libmaus2/aio/la-PosixFdInput.lo libmaus2/lz/la-BgzfDeflateHeaderFunctions.lo libmaus2/lz/la-BgzfDeflateZStreamBase.lo libmaus2/gtf/la-CDS.lo libmaus2/gtf/la-Exon.lo libmaus2/gtf/la-ExonInfo.lo libmaus2/gtf/la-ExonInterval.lo libmaus2/gtf/la-ExonSubInfo.lo libmaus2/protein/la-Blosum62.lo libmaus2/protein/la-CodonMapper.lo libmaus2/bambam/la-ChecksumsFactory.lo libmaus2/vcf/la-VCFSortEntry.lo libmaus2/network/la-CurlInitObject.lo libmaus2/network/la-CurlOutputBlock.lo libmaus2/network/la-CurlResponseAcceptor.lo libmaus2/network/la-HttpCurlResponseAcceptor.lo libmaus2/network/la-FtpCurlResponseAcceptor.lo libmaus2/network/la-CurlObject.lo libmaus2/network/la-CurlObjectReader.lo libmaus2/network/la-CurlObjectThreadCallable.lo libmaus2/network/la-CurlInputStreamBuffer.lo libmaus2/network/la-CurlInputStream.lo libmaus2/network/la-GetHostName.lo libmaus2/aio/la-SecrecyInputStreamFactory.lo libmaus2/aio/la-SecrecyOutputStreamFactory.lo -ldl -lz -lgmp -lnettle -lgpgme -lassuan -lgpg-error libmaus2_parallel.la libmaus2_autoarray.la libmaus2_exception.la libmaus2_stacktrace.la libmaus2_posix.la libmaus2_demangle.la libmaus2_arch.la -lz
libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/10/crtbeginS.o libmaus2/.libs/la-StaticInitialization.o libmaus2/bitio/.libs/la-CompactArray.o libmaus2/rank/.libs/la-RankTable.o libmaus2/rank/.libs/la-log2table.o libmaus2/fastx/.libs/la-isFastQ.o libmaus2/wavelet/.libs/la-toWaveletTreeBits.o libmaus2/suffixsort/.libs/la-divsufsort.o libmaus2/digest/.libs/la-md5.o libmaus2/math/.libs/la-primes16.o libmaus2/util/.libs/la-OutputFileNameTools.o libmaus2/select/.libs/la-ESelectBase.o libmaus2/bambam/.libs/la-CigarStringParser.o libmaus2/fastx/.libs/la-Phred.o libmaus2/lz/.libs/la-SnappyCompress.o libmaus2/bambam/.libs/la-ReadEndsContainer.o libmaus2/bambam/.libs/la-ReadEnds.o libmaus2/huffman/.libs/la-IndexLoaderBase.o libmaus2/bambam/.libs/la-BamAlignmentDecoderBase.o libmaus2/bambam/.libs/la-StrCmpNum.o libmaus2/huffman/.libs/la-KvInitResult.o libmaus2/fm/.libs/la-MausFmToBwaConversion.o libmaus2/util/.libs/la-TempFileNameGenerator.o libmaus2/util/.libs/la-TempFileNameGeneratorState.o libmaus2/util/.libs/la-ArgInfo.o libmaus2/util/.libs/la-BitList.o libmaus2/util/.libs/la-VarBitList.o libmaus2/util/.libs/la-Concat.o libmaus2/util/.libs/la-ConcatRequest.o libmaus2/util/.libs/la-ConsoleColor.o libmaus2/util/.libs/la-DynamicLoading.o libmaus2/util/.libs/la-GetFileSize.o libmaus2/util/.libs/la-Histogram.o libmaus2/util/.libs/la-HistogramSet.o libmaus2/util/.libs/la-IncreasingList.o libmaus2/util/.libs/la-IntervalTree.o libmaus2/util/.libs/la-GenericIntervalTree.o libmaus2/util/.libs/la-LookupIntervalTree.o libmaus2/digest/.libs/la-md5_interface.o libmaus2/util/.libs/la-MemUsage.o libmaus2/util/.libs/la-nstat.o libmaus2/util/.libs/la-SaturatingCounter.o libmaus2/util/.libs/la-StringSerialisation.o libmaus2/util/.libs/la-SuccinctBorderArray.o libmaus2/util/.libs/la-Terminal.o libmaus2/util/.libs/la-OctetString.o libmaus2/util/.libs/la-Utf8String.o libmaus2/util/.libs/la-Utf8BlockIndexDecoder.o libmaus2/util/.libs/la-Utf8BlockIndex.o libmaus2/util/.libs/la-Utf8DecoderBuffer.o libmaus2/util/.libs/la-Utf8DecoderWrapper.o libmaus2/suffixtree/.libs/la-CompressedSuffixTree.o libmaus2/bambam/.libs/la-AlignmentValidity.o libmaus2/bambam/.libs/la-BamFlagBase.o libmaus2/bambam/.libs/la-ReadGroup.o libmaus2/bambam/.libs/la-DuplicationMetrics.o libmaus2/bambam/.libs/la-BamDefaultAdapters.o libmaus2/bambam/.libs/la-BamRange.o libmaus2/bambam/.libs/la-BamIndexBinChunk.o libmaus2/bambam/.libs/la-BamIndexLinearChunk.o libmaus2/huffman/.libs/la-HuffmanTree.o libmaus2/bambam/.libs/la-BamAlignmentDecoderInfo.o libmaus2/lz/.libs/la-Lz4Base.o libmaus2/lz/.libs/la-Lz4Compress.o libmaus2/lz/.libs/la-Lz4DecoderBuffer.o libmaus2/lz/.libs/la-lz4.o libmaus2/fm/.libs/la-BidirectionalIndexInterval.o libmaus2/fm/.libs/la-BidirectionalIndexIntervalSymbol.o libmaus2/gamma/.libs/la-SparseGammaGapFileIndexDecoderEntry.o libmaus2/fastx/.libs/la-FastALineParserLineInfo.o libmaus2/fastx/.libs/la-FastAMatchTable.o libmaus2/lcs/.libs/la-EditDistanceResult.o libmaus2/fastx/.libs/la-FastABgzfIndexEntry.o libmaus2/fastx/.libs/la-FastABgzfIndex.o libmaus2/fastx/.libs/la-FastAIndexEntry.o libmaus2/fastx/.libs/la-FastAIndex.o libmaus2/hashing/.libs/la-Crc32.o libmaus2/hashing/.libs/la-MurmurHash3.o libmaus2/lcs/.libs/la-LocalBaseConstants.o libmaus2/lcs/.libs/la-LocalEditDistanceResult.o libmaus2/bambam/.libs/la-BamHeaderParserStateBase.o libmaus2/bambam/.libs/la-GeneFlatFile.o libmaus2/bambam/.libs/la-GeneFlatFileEntry.o libmaus2/trie/.libs/la-SimpleTrie.o libmaus2/bambam/.libs/la-BamStreamingMarkDuplicatesSupport.o libmaus2/alignment/.libs/la-FactorMatchInfo.o libmaus2/alignment/.libs/la-KmerInfo.o libmaus2/bambam/.libs/la-SamInfoBase.o libmaus2/digest/.libs/la-SHA1.o libmaus2/digest/.libs/la-SHA2_224.o libmaus2/digest/.libs/la-SHA2_256.o libmaus2/digest/.libs/la-SHA2_384.o libmaus2/digest/.libs/la-SHA2_512.o libmaus2/digest/.libs/la-CRC32.o libmaus2/digest/.libs/la-CRC32C_Core.o libmaus2/digest/.libs/la-CRC32C.o libmaus2/digest/.libs/la-CRC32_Core.o libmaus2/bambam/parallel/.libs/la-ValidationFragment.o libmaus2/bambam/parallel/.libs/la-GenericInputControlStreamInfo.o libmaus2/fastx/.libs/la-NameInfoBase.o libmaus2/bambam/parallel/.libs/la-RefIdInterval.o libmaus2/fastx/.libs/la-RefPathToken.o libmaus2/fastx/.libs/la-RefPathTokenVector.o libmaus2/dazzler/db/.libs/la-FastaInfo.o libmaus2/dazzler/db/.libs/la-IndexBase.o libmaus2/dazzler/db/.libs/la-DatabaseFile.o libmaus2/dazzler/db/.libs/la-Read.o libmaus2/dazzler/align/.libs/la-Path.o libmaus2/dazzler/align/.libs/la-Overlap.o libmaus2/lcs/.libs/la-AlignmentStatistics.o libmaus2/fastx/.libs/la-SingleWordDNABitBuffer.o libmaus2/util/.libs/la-LongestIncreasingSubsequenceExtendedResult.o libmaus2/lcs/.libs/la-AlignerFactory.o libmaus2/lcs/.libs/la-BandedAlignerFactory.o libmaus2/aio/.libs/la-InputStreamInstance.o libmaus2/aio/.libs/la-OutputStreamInstance.o libmaus2/aio/.libs/la-OutputStreamFactoryContainer.o libmaus2/dazzler/align/.libs/la-TraceBlock.o libmaus2/dazzler/align/.libs/la-ApproximateRun.o libmaus2/suffixsort/.libs/la-BwtMergeBlockSortRequest.o libmaus2/dazzler/align/.libs/la-OverlapMeta.o libmaus2/dazzler/align/.libs/la-Tandem.o libmaus2/dazzler/align/.libs/la-TandemVector.o libmaus2/math/.libs/la-GmpInteger.o libmaus2/math/.libs/la-GmpFloat.o libmaus2/dazzler/align/.libs/la-TracePoint.o libmaus2/lz/.libs/la-XzDecoder.o libmaus2/util/.libs/la-ArgParser.o libmaus2/fastx/.libs/la-DNAIndexMetaDataSequence.o libmaus2/fastx/.libs/la-DNAIndexMetaData.o libmaus2/bambam/.libs/la-PileVectorElement.o libmaus2/bambam/.libs/la-PileQualityVectorElement.o libmaus2/digest/.libs/la-SHA3_256.o libmaus2/fastx/.libs/la-DNAIndexMetaDataBigBand.o libmaus2/fastx/.libs/la-DNAIndexMetaDataBigBandBiDir.o libmaus2/rank/.libs/la-DNARankBiDirRange.o libmaus2/lcs/.libs/la-NNPTraceElement.o libmaus2/lcs/.libs/la-NNPTraceContainer.o libmaus2/lcs/.libs/la-NNPAlignResult.o libmaus2/suffixsort/bwtb3m/.libs/la-MergeStrategyMergeGapRequest.o libmaus2/suffixsort/bwtb3m/.libs/la-BwtMergeSort.o libmaus2/suffixsort/bwtb3m/.libs/la-BwtComputeSSA.o libmaus2/fastx/.libs/la-FastAToCompact4BigBand.o libmaus2/suffixsort/bwtb3m/.libs/la-BwtMergeSortResult.o libmaus2/lz/.libs/la-ZlibInterface.o libmaus2/suffixsort/bwtb3m/.libs/la-BwtSelectSSA.o libmaus2/aio/.libs/la-FileRemoval.o libmaus2/rank/.libs/la-DNARankMEM.o libmaus2/lcs/.libs/la-ChainAddQueueElement.o libmaus2/lcs/.libs/la-Chain.o libmaus2/lcs/.libs/la-ChainNode.o libmaus2/lcs/.libs/la-ChainNodeInfo.o libmaus2/lcs/.libs/la-ChainRemoveQueueElement.o libmaus2/lcs/.libs/la-ChainSplayTreeNode.o libmaus2/timing/.libs/la-RealTimeClock.o libmaus2/aio/.libs/la-PosixFdOutputStreamFactory.o libmaus2/dazzler/align/.libs/la-OverlapHeader.o libmaus2/bambam/.libs/la-BamAlignment.o libmaus2/suffixsort/bwtb3m/.libs/la-MergeStrategyMergeInput.o libmaus2/aio/.libs/la-InputOutputStreamInstance.o libmaus2/dazzler/align/.libs/la-OverlapInfo.o libmaus2/dazzler/align/.libs/la-OverlapDataInterface.o libmaus2/util/.libs/la-PathTools.o libmaus2/aio/.libs/la-OFStreamOutputStreamFactory.o libmaus2/aio/.libs/la-PosixFdInput.o libmaus2/lz/.libs/la-BgzfDeflateHeaderFunctions.o libmaus2/lz/.libs/la-BgzfDeflateZStreamBase.o libmaus2/gtf/.libs/la-CDS.o libmaus2/gtf/.libs/la-Exon.o libmaus2/gtf/.libs/la-ExonInfo.o libmaus2/gtf/.libs/la-ExonInterval.o libmaus2/gtf/.libs/la-ExonSubInfo.o libmaus2/protein/.libs/la-Blosum62.o libmaus2/protein/.libs/la-CodonMapper.o libmaus2/bambam/.libs/la-ChecksumsFactory.o libmaus2/vcf/.libs/la-VCFSortEntry.o libmaus2/network/.libs/la-CurlInitObject.o libmaus2/network/.libs/la-CurlOutputBlock.o libmaus2/network/.libs/la-CurlResponseAcceptor.o libmaus2/network/.libs/la-HttpCurlResponseAcceptor.o libmaus2/network/.libs/la-FtpCurlResponseAcceptor.o libmaus2/network/.libs/la-CurlObject.o libmaus2/network/.libs/la-CurlObjectReader.o libmaus2/network/.libs/la-CurlObjectThreadCallable.o libmaus2/network/.libs/la-CurlInputStreamBuffer.o libmaus2/network/.libs/la-CurlInputStream.o libmaus2/network/.libs/la-GetHostName.o libmaus2/aio/.libs/la-SecrecyInputStreamFactory.o libmaus2/aio/.libs/la-SecrecyOutputStreamFactory.o -Wl,-rpath -Wl,/<<BUILDDIR>>/libmaus2-2.0.768+dfsg/src/.libs -L/lib -ldl -lgmp -lnettle -lgpgme -lassuan -lgpg-error ./.libs/libmaus2_parallel.so ./.libs/libmaus2_autoarray.so ./.libs/libmaus2_exception.so ./.libs/libmaus2_stacktrace.so ./.libs/libmaus2_posix.so ./.libs/libmaus2_demangle.so ./.libs/libmaus2_arch.so -lz -L/usr/lib/gcc/arm-linux-gnueabihf/10 -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/10/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/10/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/10/../../../arm-linux-gnueabihf/crtn.o -pthread -fopenmp -g -O2 -fstack-protector-strong -O3 -pthread -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,relro -pthread -fopenmp -Wl,-soname -Wl,libmaus2.so.2 -o .libs/libmaus2.so.2.0.768
libtool: link: (cd ".libs" && rm -f "libmaus2.so.2" && ln -s "libmaus2.so.2.0.768" "libmaus2.so.2")
libtool: link: (cd ".libs" && rm -f "libmaus2.so" && ln -s "libmaus2.so.2.0.768" "libmaus2.so")
libtool: link: ar cr .libs/libmaus2.a libmaus2/la-StaticInitialization.o libmaus2/bitio/la-CompactArray.o libmaus2/rank/la-RankTable.o libmaus2/rank/la-log2table.o libmaus2/fastx/la-isFastQ.o libmaus2/wavelet/la-toWaveletTreeBits.o libmaus2/suffixsort/la-divsufsort.o libmaus2/digest/la-md5.o libmaus2/math/la-primes16.o libmaus2/util/la-OutputFileNameTools.o libmaus2/select/la-ESelectBase.o libmaus2/bambam/la-CigarStringParser.o libmaus2/fastx/la-Phred.o libmaus2/lz/la-SnappyCompress.o libmaus2/bambam/la-ReadEndsContainer.o libmaus2/bambam/la-ReadEnds.o libmaus2/huffman/la-IndexLoaderBase.o libmaus2/bambam/la-BamAlignmentDecoderBase.o libmaus2/bambam/la-StrCmpNum.o libmaus2/huffman/la-KvInitResult.o libmaus2/fm/la-MausFmToBwaConversion.o libmaus2/util/la-TempFileNameGenerator.o libmaus2/util/la-TempFileNameGeneratorState.o libmaus2/util/la-ArgInfo.o libmaus2/util/la-BitList.o libmaus2/util/la-VarBitList.o libmaus2/util/la-Concat.o libmaus2/util/la-ConcatRequest.o libmaus2/util/la-ConsoleColor.o libmaus2/util/la-DynamicLoading.o libmaus2/util/la-GetFileSize.o libmaus2/util/la-Histogram.o libmaus2/util/la-HistogramSet.o libmaus2/util/la-IncreasingList.o libmaus2/util/la-IntervalTree.o libmaus2/util/la-GenericIntervalTree.o libmaus2/util/la-LookupIntervalTree.o libmaus2/digest/la-md5_interface.o libmaus2/util/la-MemUsage.o libmaus2/util/la-nstat.o libmaus2/util/la-SaturatingCounter.o libmaus2/util/la-StringSerialisation.o libmaus2/util/la-SuccinctBorderArray.o libmaus2/util/la-Terminal.o libmaus2/util/la-OctetString.o libmaus2/util/la-Utf8String.o libmaus2/util/la-Utf8BlockIndexDecoder.o libmaus2/util/la-Utf8BlockIndex.o libmaus2/util/la-Utf8DecoderBuffer.o libmaus2/util/la-Utf8DecoderWrapper.o libmaus2/suffixtree/la-CompressedSuffixTree.o libmaus2/bambam/la-AlignmentValidity.o libmaus2/bambam/la-BamFlagBase.o libmaus2/bambam/la-ReadGroup.o libmaus2/bambam/la-DuplicationMetrics.o libmaus2/bambam/la-BamDefaultAdapters.o libmaus2/bambam/la-BamRange.o libmaus2/bambam/la-BamIndexBinChunk.o libmaus2/bambam/la-BamIndexLinearChunk.o libmaus2/huffman/la-HuffmanTree.o libmaus2/bambam/la-BamAlignmentDecoderInfo.o libmaus2/lz/la-Lz4Base.o libmaus2/lz/la-Lz4Compress.o libmaus2/lz/la-Lz4DecoderBuffer.o libmaus2/lz/la-lz4.o libmaus2/fm/la-BidirectionalIndexInterval.o libmaus2/fm/la-BidirectionalIndexIntervalSymbol.o libmaus2/gamma/la-SparseGammaGapFileIndexDecoderEntry.o libmaus2/fastx/la-FastALineParserLineInfo.o libmaus2/fastx/la-FastAMatchTable.o libmaus2/lcs/la-EditDistanceResult.o libmaus2/fastx/la-FastABgzfIndexEntry.o libmaus2/fastx/la-FastABgzfIndex.o libmaus2/fastx/la-FastAIndexEntry.o libmaus2/fastx/la-FastAIndex.o libmaus2/hashing/la-Crc32.o libmaus2/hashing/la-MurmurHash3.o libmaus2/lcs/la-LocalBaseConstants.o libmaus2/lcs/la-LocalEditDistanceResult.o libmaus2/bambam/la-BamHeaderParserStateBase.o libmaus2/bambam/la-GeneFlatFile.o libmaus2/bambam/la-GeneFlatFileEntry.o libmaus2/trie/la-SimpleTrie.o libmaus2/bambam/la-BamStreamingMarkDuplicatesSupport.o libmaus2/alignment/la-FactorMatchInfo.o libmaus2/alignment/la-KmerInfo.o libmaus2/bambam/la-SamInfoBase.o libmaus2/digest/la-SHA1.o libmaus2/digest/la-SHA2_224.o libmaus2/digest/la-SHA2_256.o libmaus2/digest/la-SHA2_384.o libmaus2/digest/la-SHA2_512.o libmaus2/digest/la-CRC32.o libmaus2/digest/la-CRC32C_Core.o libmaus2/digest/la-CRC32C.o libmaus2/digest/la-CRC32_Core.o libmaus2/bambam/parallel/la-ValidationFragment.o libmaus2/bambam/parallel/la-GenericInputControlStreamInfo.o libmaus2/fastx/la-NameInfoBase.o libmaus2/bambam/parallel/la-RefIdInterval.o libmaus2/fastx/la-RefPathToken.o libmaus2/fastx/la-RefPathTokenVector.o libmaus2/dazzler/db/la-FastaInfo.o libmaus2/dazzler/db/la-IndexBase.o libmaus2/dazzler/db/la-DatabaseFile.o libmaus2/dazzler/db/la-Read.o libmaus2/dazzler/align/la-Path.o libmaus2/dazzler/align/la-Overlap.o libmaus2/lcs/la-AlignmentStatistics.o libmaus2/fastx/la-SingleWordDNABitBuffer.o libmaus2/util/la-LongestIncreasingSubsequenceExtendedResult.o libmaus2/lcs/la-AlignerFactory.o libmaus2/lcs/la-BandedAlignerFactory.o libmaus2/aio/la-InputStreamInstance.o libmaus2/aio/la-OutputStreamInstance.o libmaus2/aio/la-OutputStreamFactoryContainer.o libmaus2/dazzler/align/la-TraceBlock.o libmaus2/dazzler/align/la-ApproximateRun.o libmaus2/suffixsort/la-BwtMergeBlockSortRequest.o libmaus2/dazzler/align/la-OverlapMeta.o libmaus2/dazzler/align/la-Tandem.o libmaus2/dazzler/align/la-TandemVector.o libmaus2/math/la-GmpInteger.o libmaus2/math/la-GmpFloat.o libmaus2/dazzler/align/la-TracePoint.o libmaus2/lz/la-XzDecoder.o libmaus2/util/la-ArgParser.o libmaus2/fastx/la-DNAIndexMetaDataSequence.o libmaus2/fastx/la-DNAIndexMetaData.o libmaus2/bambam/la-PileVectorElement.o libmaus2/bambam/la-PileQualityVectorElement.o libmaus2/digest/la-SHA3_256.o libmaus2/fastx/la-DNAIndexMetaDataBigBand.o libmaus2/fastx/la-DNAIndexMetaDataBigBandBiDir.o libmaus2/rank/la-DNARankBiDirRange.o libmaus2/lcs/la-NNPTraceElement.o libmaus2/lcs/la-NNPTraceContainer.o libmaus2/lcs/la-NNPAlignResult.o libmaus2/suffixsort/bwtb3m/la-MergeStrategyMergeGapRequest.o libmaus2/suffixsort/bwtb3m/la-BwtMergeSort.o libmaus2/suffixsort/bwtb3m/la-BwtComputeSSA.o libmaus2/fastx/la-FastAToCompact4BigBand.o libmaus2/suffixsort/bwtb3m/la-BwtMergeSortResult.o libmaus2/lz/la-ZlibInterface.o libmaus2/suffixsort/bwtb3m/la-BwtSelectSSA.o libmaus2/aio/la-FileRemoval.o libmaus2/rank/la-DNARankMEM.o libmaus2/lcs/la-ChainAddQueueElement.o libmaus2/lcs/la-Chain.o libmaus2/lcs/la-ChainNode.o libmaus2/lcs/la-ChainNodeInfo.o libmaus2/lcs/la-ChainRemoveQueueElement.o libmaus2/lcs/la-ChainSplayTreeNode.o libmaus2/timing/la-RealTimeClock.o libmaus2/aio/la-PosixFdOutputStreamFactory.o libmaus2/dazzler/align/la-OverlapHeader.o libmaus2/bambam/la-BamAlignment.o libmaus2/suffixsort/bwtb3m/la-MergeStrategyMergeInput.o libmaus2/aio/la-InputOutputStreamInstance.o libmaus2/dazzler/align/la-OverlapInfo.o libmaus2/dazzler/align/la-OverlapDataInterface.o libmaus2/util/la-PathTools.o libmaus2/aio/la-OFStreamOutputStreamFactory.o libmaus2/aio/la-PosixFdInput.o libmaus2/lz/la-BgzfDeflateHeaderFunctions.o libmaus2/lz/la-BgzfDeflateZStreamBase.o libmaus2/gtf/la-CDS.o libmaus2/gtf/la-Exon.o libmaus2/gtf/la-ExonInfo.o libmaus2/gtf/la-ExonInterval.o libmaus2/gtf/la-ExonSubInfo.o libmaus2/protein/la-Blosum62.o libmaus2/protein/la-CodonMapper.o libmaus2/bambam/la-ChecksumsFactory.o libmaus2/vcf/la-VCFSortEntry.o libmaus2/network/la-CurlInitObject.o libmaus2/network/la-CurlOutputBlock.o libmaus2/network/la-CurlResponseAcceptor.o libmaus2/network/la-HttpCurlResponseAcceptor.o libmaus2/network/la-FtpCurlResponseAcceptor.o libmaus2/network/la-CurlObject.o libmaus2/network/la-CurlObjectReader.o libmaus2/network/la-CurlObjectThreadCallable.o libmaus2/network/la-CurlInputStreamBuffer.o libmaus2/network/la-CurlInputStream.o libmaus2/network/la-GetHostName.o libmaus2/aio/la-SecrecyInputStreamFactory.o libmaus2/aio/la-SecrecyOutputStreamFactory.o
libtool: link: ranlib .libs/libmaus2.a
libtool: link: ( cd ".libs" && rm -f "libmaus2.la" && ln -s "../libmaus2.la" "libmaus2.la" )
/bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -Wl,-z,relro -rdynamic -o testThreadPool test/testThreadPool-testThreadPool.o libmaus2.la libmaus2_parallel.la libmaus2_autoarray.la libmaus2_exception.la libmaus2_stacktrace.la libmaus2_posix.la libmaus2_demangle.la libmaus2_arch.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lz
/bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -Wl,-z,relro -rdynamic -o testThreadPoolRead test/testThreadPoolRead-testThreadPoolRead.o libmaus2.la libmaus2_parallel.la libmaus2_autoarray.la libmaus2_exception.la libmaus2_stacktrace.la libmaus2_posix.la libmaus2_demangle.la libmaus2_arch.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lz
/bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -Wl,-z,relro -rdynamic -o testThreadPoolBgzfRead test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o libmaus2.la libmaus2_parallel.la libmaus2_autoarray.la libmaus2_exception.la libmaus2_stacktrace.la libmaus2_posix.la libmaus2_demangle.la libmaus2_arch.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lz
/bin/bash ../libtool --tag=CXX --mode=link g++ -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -Wl,-z,relro -rdynamic -o testThreadPoolBgzfDecompress test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o libmaus2.la libmaus2_parallel.la libmaus2_autoarray.la libmaus2_exception.la libmaus2_stacktrace.la libmaus2_posix.la libmaus2_demangle.la libmaus2_arch.la libmaus2_simd_align_128.la libmaus2_simd_align_256.la -lz
libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -Wl,-z -Wl,relro -rdynamic -o .libs/testThreadPoolRead test/testThreadPoolRead-testThreadPoolRead.o ./.libs/libmaus2.so ./.libs/libmaus2_parallel.so ./.libs/libmaus2_autoarray.so ./.libs/libmaus2_exception.so ./.libs/libmaus2_stacktrace.so ./.libs/libmaus2_posix.so ./.libs/libmaus2_demangle.so ./.libs/libmaus2_arch.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lz -fopenmp -pthread
libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -Wl,-z -Wl,relro -rdynamic -o .libs/testThreadPool test/testThreadPool-testThreadPool.o ./.libs/libmaus2.so ./.libs/libmaus2_parallel.so ./.libs/libmaus2_autoarray.so ./.libs/libmaus2_exception.so ./.libs/libmaus2_stacktrace.so ./.libs/libmaus2_posix.so ./.libs/libmaus2_demangle.so ./.libs/libmaus2_arch.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lz -fopenmp -pthread
libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -Wl,-z -Wl,relro -rdynamic -o .libs/testThreadPoolBgzfDecompress test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o ./.libs/libmaus2.so ./.libs/libmaus2_parallel.so ./.libs/libmaus2_autoarray.so ./.libs/libmaus2_exception.so ./.libs/libmaus2_stacktrace.so ./.libs/libmaus2_posix.so ./.libs/libmaus2_demangle.so ./.libs/libmaus2_arch.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lz -fopenmp -pthread
libtool: link: g++ -W -Wall -Wnon-virtual-dtor -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.768+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=c++17 -pthread -fopenmp -Wl,-z -Wl,relro -rdynamic -o .libs/testThreadPoolBgzfRead test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o ./.libs/libmaus2.so ./.libs/libmaus2_parallel.so ./.libs/libmaus2_autoarray.so ./.libs/libmaus2_exception.so ./.libs/libmaus2_stacktrace.so ./.libs/libmaus2_posix.so ./.libs/libmaus2_demangle.so ./.libs/libmaus2_arch.so ./.libs/libmaus2_simd_align_128.so ./.libs/libmaus2_simd_align_256.so -lz -fopenmp -pthread
/usr/bin/ld: /usr/bin/ld: test/testThreadPool-testThreadPool.o: in function `std::__atomic_base<unsigned long long>::operator++()':
/usr/include/c++/10/bits/atomic_base.h:326: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:326: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: /usr/bin/ld: test/testThreadPoolRead-testThreadPoolRead.o: in function `std::__atomic_base<unsigned long long>::operator-=(unsigned long long)':
/usr/include/c++/10/bits/atomic_base.h:350: undefined reference to `__atomic_fetch_sub_8'
/usr/bin/ld: test/testThreadPoolRead-testThreadPoolRead.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolRead-testThreadPoolRead.o: in function `std::__atomic_base<unsigned long long>::operator+=(unsigned long long)':
/usr/include/c++/10/bits/atomic_base.h:342: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolRead-testThreadPoolRead.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolRead-testThreadPoolRead.o: in function `std::__atomic_base<unsigned long long>::exchange(unsigned long long, std::memory_order)':
/usr/include/c++/10/bits/atomic_base.h:443: undefined reference to `__atomic_exchange_8'
/usr/bin/ld: test/testThreadPoolRead-testThreadPoolRead.o: in function `std::__atomic_base<unsigned long long>::operator++()':
/usr/include/c++/10/bits/atomic_base.h:326: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolRead-testThreadPoolRead.o: in function `std::__atomic_base<unsigned long long>::operator-=(unsigned long long)':
/usr/include/c++/10/bits/atomic_base.h:350: undefined reference to `__atomic_fetch_sub_8'
/usr/bin/ld: test/testThreadPoolRead-testThreadPoolRead.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld/usr/bin/ld: ./.libs/libmaus2.so: undefined reference to `__atomic_exchange_8: '
test/testThreadPoolRead-testThreadPoolRead.o: in function `std::__atomic_base<unsigned long long>::operator-=(unsigned long long)':
/usr/include/c++/10/bits/atomic_base.h:350: undefined reference to `__atomic_fetch_sub_8'
/usr/bin/ld: test/testThreadPoolRead-testThreadPoolRead.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolRead-testThreadPoolRead.o: in function `std::__atomic_base<unsigned long long>::operator++()':
/usr/include/c++/10/bits/atomic_base.h:326: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolRead-testThreadPoolRead.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/bin/ld: ./.libs/libmaus2.so: undefined reference to `__atomic_fetch_or_8'
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `/usr/bin/ld__atomic_load_8'
/usr/bin/ld: : ./.libs/libmaus2.so: undefined reference to `__atomic_compare_exchange_8'
test/testThreadPoolRead-testThreadPoolRead.o: in function `std::__atomic_base<unsigned long long>::operator--()':
/usr/include/c++/10/bits/atomic_base.h:334: undefined reference to `__atomic_fetch_sub_8'
/usr/bin/ld: test/testThreadPoolRead-testThreadPoolRead.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/bin/ld: ./.libs/libmaus2.so: undefined reference to `__atomic_fetch_sub_8'
test/testThreadPoolRead-testThreadPoolRead.o: in function `std::__atomic_base<unsigned long long>::fetch_add(unsigned long long, std::memory_order)':
/usr/include/c++/10/bits/atomic_base.h:548: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolRead-testThreadPoolRead.o: in function `std::__atomic_base<unsigned long long>::store(unsigned long long, std::memory_order)':
/usr/include/c++/10/bits/atomic_base.h:404: undefined reference to `__atomic_store_8'
/usr/bin/ld: test/testThreadPoolRead-testThreadPoolRead.o: in function `std::__atomic_base<unsigned long long>::operator+=(unsigned long long)':
/usr/include/c++/10/bits/atomic_base.h:342: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: ./.libs/libmaus2.so: undefined reference to `__atomic_load_8'
/usr/bin/ld: ./.libs/libmaus2.so: undefined reference to `__atomic_store_8'
/usr/bin/ld: test/testThreadPoolRead-testThreadPoolRead.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: ./.libs/libmaus2.so: undefined reference to `__atomic_fetch_and_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolRead-testThreadPoolRead.o: in function `std::__atomic_base<unsigned long long>::operator++()':
/usr/include/c++/10/bits/atomic_base.h:326: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolRead-testThreadPoolRead.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
collect2: error: ld returned 1 exit status
make[3]: *** [Makefile:6830: testThreadPool] Error 1
make[3]: *** Waiting for unfinished jobs....
/usr/bin/ld: ./.libs/libmaus2.so: undefined reference to `__atomic_fetch_or_8'
/usr/bin/ld: ./.libs/libmaus2.so: undefined reference to `__atomic_compare_exchange_8'
/usr/bin/ld: ./.libs/libmaus2.so: undefined reference to `__atomic_fetch_and_8'
collect2: error: ld returned 1 exit status
make[3]: *** [Makefile:6854: testThreadPoolRead] Error 1
test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::operator-=(unsigned long long)':
/usr/include/c++/10/bits/atomic_base.h:350: undefined reference to `__atomic_fetch_sub_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o:/usr/include/c++/10/bits/atomic_base.h:426: more undefined references to `__atomic_load_8' follow
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::store(unsigned long long, std::memory_order)':
/usr/include/c++/10/bits/atomic_base.h:404: undefined reference to `__atomic_store_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::operator+=(unsigned long long)':
/usr/include/c++/10/bits/atomic_base.h:342: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::exchange(unsigned long long, std::memory_order)':
/usr/include/c++/10/bits/atomic_base.h:443: undefined reference to `__atomic_exchange_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::operator-=(unsigned long long)':
/usr/include/c++/10/bits/atomic_base.h:350: undefined reference to `__atomic_fetch_sub_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:350: undefined reference to `__atomic_fetch_sub_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:350: undefined reference to `__atomic_fetch_sub_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::operator++()':
/usr/include/c++/10/bits/atomic_base.h:326: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::operator+=(unsigned long long)':
/usr/include/c++/10/bits/atomic_base.h:342: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::exchange(unsigned long long, std::memory_order)':
/usr/include/c++/10/bits/atomic_base.h:443: undefined reference to `__atomic_exchange_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::operator++()':
/usr/include/c++/10/bits/atomic_base.h:326: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::operator-=(unsigned long long)':
/usr/include/c++/10/bits/atomic_base.h:350: undefined reference to `__atomic_fetch_sub_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::operator-=(unsigned long long)':
/usr/include/c++/10/bits/atomic_base.h:350: undefined reference to `__atomic_fetch_sub_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::operator++()':
/usr/include/c++/10/bits/atomic_base.h:326: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::operator--()':
/usr/include/c++/10/bits/atomic_base.h:334: undefined reference to `__atomic_fetch_sub_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::fetch_add(unsigned long long, std::memory_order)':
/usr/include/c++/10/bits/atomic_base.h:548: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::store(unsigned long long, std::memory_order)':
/usr/include/c++/10/bits/atomic_base.h:404: undefined reference to `__atomic_store_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::operator+=(unsigned long long)':
/usr/include/c++/10/bits/atomic_base.h:342: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::operator++()':
/usr/include/c++/10/bits/atomic_base.h:326: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::operator++()':
/usr/include/c++/10/bits/atomic_base.h:326: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::operator++()':
/usr/include/c++/10/bits/atomic_base.h:326: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o:/usr/include/c++/10/bits/atomic_base.h:426: more undefined references to `__atomic_load_8' follow
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::store(unsigned long long, std::memory_order)':
/usr/include/c++/10/bits/atomic_base.h:404: undefined reference to `__atomic_store_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:404: undefined reference to `__atomic_store_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::fetch_add(unsigned long long, std::memory_order)':
/usr/include/c++/10/bits/atomic_base.h:548: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::store(unsigned long long, std::memory_order)':
/usr/include/c++/10/bits/atomic_base.h:404: undefined reference to `__atomic_store_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:404: undefined reference to `__atomic_store_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o:/usr/include/c++/10/bits/atomic_base.h:426: more undefined references to `__atomic_load_8' follow
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::fetch_add(unsigned long long, std::memory_order)':
/usr/include/c++/10/bits/atomic_base.h:548: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:548: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::store(unsigned long long, std::memory_order)':
/usr/include/c++/10/bits/atomic_base.h:404: undefined reference to `__atomic_store_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:404: undefined reference to `__atomic_store_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:404: undefined reference to `__atomic_store_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::operator++()':
/usr/include/c++/10/bits/atomic_base.h:326: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfRead-testThreadPoolBgzfRead.o: in function `std::__atomic_base<unsigned long long>::store(unsigned long long, std::memory_order)':
/usr/include/c++/10/bits/atomic_base.h:404: undefined reference to `__atomic_store_8'
/usr/bin/ld: /usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::operator-=(unsigned long long)':
/usr/include/c++/10/bits/atomic_base.h:350: undefined reference to `__atomic_fetch_sub_8'
/usr/include/c++/10/bits/atomic_base.h:404: undefined reference to `__atomic_store_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o:/usr/include/c++/10/bits/atomic_base.h:426: more undefined references to `__atomic_load_8' follow
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::store(unsigned long long, std::memory_order)':
/usr/include/c++/10/bits/atomic_base.h:404: undefined reference to `__atomic_store_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::operator+=(unsigned long long)':
/usr/include/c++/10/bits/atomic_base.h:342: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::exchange(unsigned long long, std::memory_order)':
/usr/include/c++/10/bits/atomic_base.h:443: undefined reference to `__atomic_exchange_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::operator-=(unsigned long long)':
/usr/include/c++/10/bits/atomic_base.h:350: undefined reference to `__atomic_fetch_sub_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:350: undefined reference to `__atomic_fetch_sub_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:350: undefined reference to `__atomic_fetch_sub_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::operator++()':
/usr/include/c++/10/bits/atomic_base.h:326: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::operator+=(unsigned long long)':
/usr/include/c++/10/bits/atomic_base.h:342: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::exchange(unsigned long long, std::memory_order)':
/usr/include/c++/10/bits/atomic_base.h:443: undefined reference to `__atomic_exchange_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::operator++()':
/usr/include/c++/10/bits/atomic_base.h:326: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::operator-=(unsigned long long)':
/usr/include/c++/10/bits/atomic_base.h:350: undefined reference to `__atomic_fetch_sub_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::operator-=(unsigned long long)':
/usr/include/c++/10/bits/atomic_base.h:350: undefined reference to `__atomic_fetch_sub_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::operator++()':
/usr/include/c++/10/bits/atomic_base.h:326: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::operator--()':
/usr/include/c++/10/bits/atomic_base.h:334: undefined reference to `__atomic_fetch_sub_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::fetch_add(unsigned long long, std::memory_order)':
/usr/include/c++/10/bits/atomic_base.h:548: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::store(unsigned long long, std::memory_order)':
/usr/include/c++/10/bits/atomic_base.h:404: undefined reference to `__atomic_store_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::operator+=(unsigned long long)':
/usr/include/c++/10/bits/atomic_base.h:342: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::operator++()':
/usr/include/c++/10/bits/atomic_base.h:326: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::operator++()':
/usr/include/c++/10/bits/atomic_base.h:326: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::operator++()':
/usr/include/c++/10/bits/atomic_base.h:326: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o:/usr/include/c++/10/bits/atomic_base.h:426: more undefined references to `__atomic_load_8' follow
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::store(unsigned long long, std::memory_order)':
/usr/include/c++/10/bits/atomic_base.h:404: undefined reference to `__atomic_store_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:404: undefined reference to `__atomic_store_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::fetch_add(unsigned long long, std::memory_order)':
/usr/include/c++/10/bits/atomic_base.h:548: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::store(unsigned long long, std::memory_order)':
/usr/include/c++/10/bits/atomic_base.h:404: undefined reference to `__atomic_store_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:404: undefined reference to `__atomic_store_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o:/usr/include/c++/10/bits/atomic_base.h:426: more undefined references to `__atomic_load_8' follow
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::fetch_add(unsigned long long, std::memory_order)':
/usr/include/c++/10/bits/atomic_base.h:548: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:548: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::store(unsigned long long, std::memory_order)':
/usr/include/c++/10/bits/atomic_base.h:404: undefined reference to `__atomic_store_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:404: undefined reference to `__atomic_store_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:404: undefined reference to `__atomic_store_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::operator++()':
/usr/include/c++/10/bits/atomic_base.h:326: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::store(unsigned long long, std::memory_order)':
/usr/include/c++/10/bits/atomic_base.h:404: undefined reference to `__atomic_store_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:404: undefined reference to `__atomic_store_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::operator+=(unsigned long long)':
/usr/include/c++/10/bits/atomic_base.h:342: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::operator++()':
/usr/include/c++/10/bits/atomic_base.h:326: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:326: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::operator++()':
/usr/include/c++/10/bits/atomic_base.h:326: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: /usr/include/c++/10/bits/atomic_base.h:326: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::operator++()':
/usr/include/c++/10/bits/atomic_base.h:326: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::operator++()':
/usr/include/c++/10/bits/atomic_base.h:326: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: test/testThreadPoolBgzfDecompress-testThreadPoolBgzfDecompress.o: in function `std::__atomic_base<unsigned long long>::load(std::memory_order) const':
/usr/include/c++/10/bits/atomic_base.h:426: undefined reference to `__atomic_load_8'
/usr/bin/ld: ./.libs/libmaus2.so: undefined reference to `__atomic_fetch_or_8'
/usr/bin/ld: ./.libs/libmaus2.so: undefined reference to `__atomic_compare_exchange_8'
/usr/bin/ld: ./.libs/libmaus2.so: undefined reference to `__atomic_fetch_and_8'
collect2: error: ld returned 1 exit status
make[3]: *** [Makefile:6848: testThreadPoolBgzfRead] Error 1
/usr/bin/ld: ./.libs/libmaus2.so: undefined reference to `__atomic_fetch_or_8'
/usr/bin/ld: ./.libs/libmaus2.so: undefined reference to `__atomic_compare_exchange_8'
/usr/bin/ld: ./.libs/libmaus2.so: undefined reference to `__atomic_fetch_and_8'
collect2: error: ld returned 1 exit status
make[3]: *** [Makefile:6842: testThreadPoolBgzfDecompress] Error 1
make[3]: Leaving directory '/<<BUILDDIR>>/libmaus2-2.0.768+dfsg/src'
make[2]: *** [Makefile:679: all-recursive] Error 1
make[2]: Leaving directory '/<<BUILDDIR>>/libmaus2-2.0.768+dfsg'
make[1]: *** [Makefile:563: all] Error 2
make[1]: Leaving directory '/<<BUILDDIR>>/libmaus2-2.0.768+dfsg'
dh_auto_build: error: make -j4 returned exit code 2
make: *** [debian/rules:12: binary-arch] Error 25
dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit status 2
--------------------------------------------------------------------------------
Build finished at 2021-03-19T11:05:11Z
Finished
--------
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
E: Build failure (dpkg-buildpackage died)
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 0
Build-Time: 15789
Distribution: bullseye-staging
Fail-Stage: build
Host Architecture: armhf
Install-Time: 361
Job: libmaus2_2.0.768+dfsg-1
Machine Architecture: armhf
Package: libmaus2
Package-Time: 16204
Source-Version: 2.0.768+dfsg-1
Space: 0
Status: failed
Version: 2.0.768+dfsg-1
--------------------------------------------------------------------------------
Finished at 2021-03-19T11:05:11Z
Build needed 00:00:00, 0k disc space