libhmsbeagle →
3.1.2+dfsg-5 →
armhf → 2019-03-05 05:25:09
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-02
+==============================================================================+
| libhmsbeagle 3.1.2+dfsg-5 (armhf) Tue, 05 Mar 2019 04:44:34 +0000 |
+==============================================================================+
Package: libhmsbeagle
Version: 3.1.2+dfsg-5
Source Version: 3.1.2+dfsg-5
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-6ccf643e-b94f-4951-98fe-751c75a5df4d' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [11.4 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [13.1 MB]
Fetched 24.4 MB in 26s (935 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'libhmsbeagle' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/libhmsbeagle.git
Please use:
git clone https://salsa.debian.org/med-team/libhmsbeagle.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 1195 kB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main libhmsbeagle 3.1.2+dfsg-5 (dsc) [2407 B]
Get:2 http://172.17.0.1/private buster-staging/main libhmsbeagle 3.1.2+dfsg-5 (tar) [1156 kB]
Get:3 http://172.17.0.1/private buster-staging/main libhmsbeagle 3.1.2+dfsg-5 (diff) [36.1 kB]
Fetched 1195 kB in 0s (7047 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/libhmsbeagle-mS5ylP/libhmsbeagle-3.1.2+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/libhmsbeagle-mS5ylP' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-qFhwDJ/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-qFhwDJ/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-qFhwDJ/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-qFhwDJ/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-qFhwDJ/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-qFhwDJ/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-qFhwDJ/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-qFhwDJ/apt_archive ./ Packages [430 B]
Fetched 2106 B in 1s (3079 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session e2fsprogs-l10n krb5-locales libexpat1
libgpg-error-l10n libgssapi-krb5-2 libk5crypto3 libkeyutils1 libkrb5-3
libkrb5support0 libnss-systemd libpam-systemd openssl systemd-sysv
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 42 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-qFhwDJ/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 15799 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in linux-any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 12~), doxygen, graphviz, javahelper, default-jdk (>= 1:1.6), ant, dh-linktree, dh-exec, libjs-jquery, ocl-icd-opencl-dev | opencl-dev, clinfo
Filtered Build-Depends: debhelper (>= 12~), doxygen, graphviz, javahelper, default-jdk (>= 1:1.6), ant, dh-linktree, dh-exec, libjs-jquery, ocl-icd-opencl-dev, clinfo
dpkg-deb: building package 'sbuild-build-depends-libhmsbeagle-dummy' in '/<<BUILDDIR>>/resolver-qFhwDJ/apt_archive/sbuild-build-depends-libhmsbeagle-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-libhmsbeagle-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-qFhwDJ/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-qFhwDJ/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-qFhwDJ/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-qFhwDJ/apt_archive ./ Sources [601 B]
Get:5 copy:/<<BUILDDIR>>/resolver-qFhwDJ/apt_archive ./ Packages [654 B]
Fetched 2588 B in 1s (3572 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install libhmsbeagle build dependencies (apt-based resolver)
------------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
e2fsprogs-l10n krb5-locales libgpg-error-l10n libnss-systemd
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
adwaita-icon-theme ant autoconf automake autopoint autotools-dev
bsdmainutils ca-certificates-java clinfo dconf-gsettings-backend
dconf-service dctrl-tools debhelper default-jdk default-jdk-headless
default-jre default-jre-headless devscripts dh-autoreconf dh-exec
dh-linktree dh-strip-nondeterminism doxygen dwz file fontconfig
fontconfig-config fonts-dejavu-core gettext gettext-base glib-networking
glib-networking-common glib-networking-services graphviz groff-base
gsettings-desktop-schemas gtk-update-icon-cache hicolor-icon-theme
intltool-debian java-common javahelper libarchive-zip-perl libasound2
libasound2-data libatk-bridge2.0-0 libatk1.0-0 libatk1.0-data libatspi2.0-0
libavahi-client3 libavahi-common-data libavahi-common3
libb-hooks-op-check-perl libbsd0 libcairo-gobject2 libcairo2 libcdt5
libcgraph6 libclang1-6.0 libclass-method-modifiers-perl libcolord2 libcroco3
libcups2 libdatrie1 libdconf1 libdevel-callchecker-perl
libdevel-globaldestruction-perl libdrm-amdgpu1 libdrm-etnaviv1
libdrm-nouveau2 libdrm-radeon1 libdynaloader-functions-perl libedit2 libelf1
libencode-locale-perl libepoxy0 libfile-homedir-perl libfile-listing-perl
libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1
libfreetype6 libfribidi0 libgd3 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common
libgif7 libgl1 libgl1-mesa-dri libgl1-mesa-glx libglapi-mesa libglib2.0-0
libglvnd0 libglx-mesa0 libglx0 libgraphite2-3 libgtk-3-0 libgtk-3-common
libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz0b libhtml-parser-perl
libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl
libhttp-message-perl libhttp-negotiate-perl libice6 libicu63
libimport-into-perl libio-html-perl libio-pty-perl libio-socket-ssl-perl
libipc-run-perl libjbig0 libjpeg62-turbo libjs-jquery libjson-glib-1.0-0
libjson-glib-1.0-common liblab-gamut1 liblcms2-2 libllvm6.0 libllvm7
libltdl7 liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic-mgc
libmagic1 libmodule-runtime-perl libmoo-perl libmpdec2 libnet-http-perl
libnet-ssleay-perl libnspr4 libnss3 libpango-1.0-0 libpangocairo-1.0-0
libpangoft2-1.0-0 libparams-classify-perl libpathplan4 libpcsclite1
libpipeline1 libpixman-1-0 libproxy1v5 libpsl5 libpython3-stdlib
libpython3.7-minimal libpython3.7-stdlib librest-0.7-0 librole-tiny-perl
librsvg2-2 librsvg2-common libsensors-config libsensors5 libsigsegv2 libsm6
libsoup-gnome2.4-1 libsoup2.4-1 libstrictures-perl
libsub-exporter-progressive-perl libsub-quote-perl libthai-data libthai0
libtiff5 libtimedate-perl libtool libtry-tiny-perl libuchardet0 liburi-perl
libwayland-client0 libwayland-cursor0 libwayland-egl1 libwebp6 libwww-perl
libwww-robotrules-perl libx11-6 libx11-data libx11-xcb1 libxapian30 libxau6
libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0
libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb1 libxcomposite1 libxcursor1
libxdamage1 libxdmcp6 libxdot4 libxext6 libxfixes3 libxi6 libxinerama1
libxkbcommon0 libxml2 libxmu6 libxpm4 libxrandr2 libxrender1 libxshmfence1
libxt6 libxtst6 libxxf86vm1 m4 man-db mime-support ocl-icd-libopencl1
ocl-icd-opencl-dev opencl-c-headers openjdk-11-jdk openjdk-11-jdk-headless
openjdk-11-jre openjdk-11-jre-headless patchutils perl-openssl-defaults
po-debconf python3 python3-minimal python3.7 python3.7-minimal
shared-mime-info ucf wdiff x11-common xkb-data
Suggested packages:
ant-doc autoconf-archive gnu-standards autoconf-doc wamerican | wordlist
whois vacation debtags dh-make adequate autopkgtest bls-standalone bsd-mailx
| mailx check-all-the-things cvs-buildpackage devscripts-el diffoscope
disorderfs dose-extra duck faketime gnuplot how-can-i-help
libauthen-sasl-perl libdbd-pg-perl libfile-desktopentry-perl
libnet-smtps-perl libterm-size-perl libyaml-syck-perl mozilla-devscripts
mutt piuparts postgresql-client quilt ratt reprotest ssh-client
svn-buildpackage w3m doxygen-latex doxygen-doc doxygen-gui gettext-doc
libasprintf-dev libgettextpo-dev gsfonts graphviz-doc groff cvs gawk
tofrodos libasound2-plugins alsa-utils colord cups-common libgd-tools gvfs
libdata-dump-perl liblcms2-utils libcrypt-ssleay-perl libscalar-number-perl
pcscd librsvg2-bin lm-sensors libbareword-filehandles-perl libindirect-perl
libmultidimensional-perl libtool-doc gfortran | fortran95-compiler gcj-jdk
libauthen-ntlm-perl xapian-tools m4-doc apparmor less www-browser opencl-icd
openjdk-11-demo openjdk-11-source visualvm libnss-mdns fonts-dejavu-extra
fonts-ipafont-gothic fonts-ipafont-mincho fonts-wqy-microhei
| fonts-wqy-zenhei fonts-indic libmail-box-perl python3-doc python3-tk
python3-venv python3.7-venv python3.7-doc binfmt-support wdiff-doc
Recommended packages:
ant-optional at dput | dupload libdistro-info-perl libgit-wrapper-perl
libgitlab-api-v4-perl liblist-compare-perl libstring-shellquote-perl
licensecheck lintian python3-apt python3-debian python3-magic
python3-requests python3-unidiff python3-xdg strace unzip wget | curl
debian-keyring equivs libsoap-lite-perl curl | wget | lynx fonts-liberation
at-spi2-core libarchive-cpio-perl libgdk-pixbuf2.0-bin libglib2.0-data
xdg-user-dirs libgtk-3-bin libgts-bin libhtml-format-perl javascript-common
libclass-xsaccessor-perl libsub-name-perl publicsuffix libltdl-dev
libdata-dump-perl libhtml-form-perl libhttp-daemon-perl libmailtools-perl
libgl1-mesa-dev | libgl-dev libxt-dev libatk-wrapper-java-jni
fonts-dejavu-extra libmail-sendmail-perl
The following NEW packages will be installed:
adwaita-icon-theme ant autoconf automake autopoint autotools-dev
bsdmainutils ca-certificates-java clinfo dconf-gsettings-backend
dconf-service dctrl-tools debhelper default-jdk default-jdk-headless
default-jre default-jre-headless devscripts dh-autoreconf dh-exec
dh-linktree dh-strip-nondeterminism doxygen dwz file fontconfig
fontconfig-config fonts-dejavu-core gettext gettext-base glib-networking
glib-networking-common glib-networking-services graphviz groff-base
gsettings-desktop-schemas gtk-update-icon-cache hicolor-icon-theme
intltool-debian java-common javahelper libarchive-zip-perl libasound2
libasound2-data libatk-bridge2.0-0 libatk1.0-0 libatk1.0-data libatspi2.0-0
libavahi-client3 libavahi-common-data libavahi-common3
libb-hooks-op-check-perl libbsd0 libcairo-gobject2 libcairo2 libcdt5
libcgraph6 libclang1-6.0 libclass-method-modifiers-perl libcolord2 libcroco3
libcups2 libdatrie1 libdconf1 libdevel-callchecker-perl
libdevel-globaldestruction-perl libdrm-amdgpu1 libdrm-etnaviv1
libdrm-nouveau2 libdrm-radeon1 libdynaloader-functions-perl libedit2 libelf1
libencode-locale-perl libepoxy0 libfile-homedir-perl libfile-listing-perl
libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1
libfreetype6 libfribidi0 libgd3 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common
libgif7 libgl1 libgl1-mesa-dri libgl1-mesa-glx libglapi-mesa libglib2.0-0
libglvnd0 libglx-mesa0 libglx0 libgraphite2-3 libgtk-3-0 libgtk-3-common
libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz0b libhtml-parser-perl
libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl
libhttp-message-perl libhttp-negotiate-perl libice6 libicu63
libimport-into-perl libio-html-perl libio-pty-perl libio-socket-ssl-perl
libipc-run-perl libjbig0 libjpeg62-turbo libjs-jquery libjson-glib-1.0-0
libjson-glib-1.0-common liblab-gamut1 liblcms2-2 libllvm6.0 libllvm7
libltdl7 liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic-mgc
libmagic1 libmodule-runtime-perl libmoo-perl libmpdec2 libnet-http-perl
libnet-ssleay-perl libnspr4 libnss3 libpango-1.0-0 libpangocairo-1.0-0
libpangoft2-1.0-0 libparams-classify-perl libpathplan4 libpcsclite1
libpipeline1 libpixman-1-0 libproxy1v5 libpsl5 libpython3-stdlib
libpython3.7-minimal libpython3.7-stdlib librest-0.7-0 librole-tiny-perl
librsvg2-2 librsvg2-common libsensors-config libsensors5 libsigsegv2 libsm6
libsoup-gnome2.4-1 libsoup2.4-1 libstrictures-perl
libsub-exporter-progressive-perl libsub-quote-perl libthai-data libthai0
libtiff5 libtimedate-perl libtool libtry-tiny-perl libuchardet0 liburi-perl
libwayland-client0 libwayland-cursor0 libwayland-egl1 libwebp6 libwww-perl
libwww-robotrules-perl libx11-6 libx11-data libx11-xcb1 libxapian30 libxau6
libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0
libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb1 libxcomposite1 libxcursor1
libxdamage1 libxdmcp6 libxdot4 libxext6 libxfixes3 libxi6 libxinerama1
libxkbcommon0 libxml2 libxmu6 libxpm4 libxrandr2 libxrender1 libxshmfence1
libxt6 libxtst6 libxxf86vm1 m4 man-db mime-support ocl-icd-libopencl1
ocl-icd-opencl-dev opencl-c-headers openjdk-11-jdk openjdk-11-jdk-headless
openjdk-11-jre openjdk-11-jre-headless patchutils perl-openssl-defaults
po-debconf python3 python3-minimal python3.7 python3.7-minimal
sbuild-build-depends-libhmsbeagle-dummy shared-mime-info ucf wdiff
x11-common xkb-data
0 upgraded, 232 newly installed, 0 to remove and 42 not upgraded.
Need to get 321 MB/323 MB of archives.
After this operation, 909 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-qFhwDJ/apt_archive ./ sbuild-build-depends-libhmsbeagle-dummy 0.invalid.0 [944 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.9.1-1 [104 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.4-2 [782 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.5.1-2 [26.6 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.8.5-2 [1230 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf libpython3.7-minimal armhf 3.7.2-2 [582 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf python3.7-minimal armhf 3.7.2-2 [1455 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf python3-minimal armhf 3.7.2-1 [36.6 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf mime-support all 3.62 [37.2 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf libmpdec2 armhf 2.4.2-2 [67.2 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf libpython3.7-stdlib armhf 3.7.2-2 [1662 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf python3.7 armhf 3.7.2-2 [323 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf libpython3-stdlib armhf 3.7.2-1 [20.0 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf python3 armhf 3.7.2-1 [61.5 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.35-2 [242 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.35-2 [109 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.35-2 [65.1 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-9 [117 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf ucf all 3.0038+nmu1 [69.0 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf hicolor-icon-theme all 0.17-2 [11.4 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.58.3-1 [1077 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf libtiff5 armhf 4.0.10-4 [236 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf libxcb1 armhf 1.13.1-2 [132 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf libx11-data all 2:1.6.7-1 [298 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf libx11-6 armhf 2:1.6.7-1 [689 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf libicu63 armhf 63.1-6 [7973 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf libxml2 armhf 2.9.4+dfsg1-7+b1 [570 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf shared-mime-info armhf 1.10-1 [762 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf libgdk-pixbuf2.0-common all 2.38.0+dfsg-7 [315 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf libgdk-pixbuf2.0-0 armhf 2.38.0+dfsg-7 [158 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf gtk-update-icon-cache armhf 3.24.5-1 [80.5 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf libfreetype6 armhf 2.9.1-3 [318 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf fontconfig-config all 2.13.1-2 [280 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf libfontconfig1 armhf 2.13.1-2 [327 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf libpixman-1-0 armhf 0.36.0-1 [458 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf libxcb-render0 armhf 1.13.1-2 [108 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf libxcb-shm0 armhf 1.13.1-2 [99.3 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf libcairo2 armhf 1.16.0-2 [602 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf libcroco3 armhf 0.6.12-3 [132 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf fontconfig armhf 2.13.1-2 [404 kB]
Get:43 http://172.17.0.1/private buster-staging/main armhf libfribidi0 armhf 1.0.5-3.1 [62.1 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf libthai-data all 0.1.28-2 [170 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf libdatrie1 armhf 0.2.12-2 [35.9 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf libthai0 armhf 0.1.28-2 [50.9 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf libpango-1.0-0 armhf 1.42.4-6 [168 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf libgraphite2-3 armhf 1.3.13-7 [69.6 kB]
Get:49 http://172.17.0.1/private buster-staging/main armhf libharfbuzz0b armhf 2.3.1-1 [1144 kB]
Get:50 http://172.17.0.1/private buster-staging/main armhf libpangoft2-1.0-0 armhf 1.42.4-6 [61.9 kB]
Get:51 http://172.17.0.1/private buster-staging/main armhf libpangocairo-1.0-0 armhf 1.42.4-6 [51.6 kB]
Get:52 http://172.17.0.1/private buster-staging/main armhf librsvg2-2 armhf 2.44.10-1+rpi1 [958 kB]
Get:53 http://172.17.0.1/private buster-staging/main armhf librsvg2-common armhf 2.44.10-1+rpi1 [22.8 kB]
Get:54 http://172.17.0.1/private buster-staging/main armhf adwaita-icon-theme all 3.30.1-1 [11.7 MB]
Get:55 http://172.17.0.1/private buster-staging/main armhf libnspr4 armhf 2:4.20-1 [89.6 kB]
Get:56 http://172.17.0.1/private buster-staging/main armhf libnss3 armhf 2:3.42.1-1 [943 kB]
Get:57 http://172.17.0.1/private buster-staging/main armhf ca-certificates-java all 20190214 [15.6 kB]
Get:58 http://172.17.0.1/private buster-staging/main armhf java-common all 0.71 [14.4 kB]
Get:59 http://172.17.0.1/private buster-staging/main armhf libavahi-common-data armhf 0.7-4+b1 [122 kB]
Get:60 http://172.17.0.1/private buster-staging/main armhf libavahi-common3 armhf 0.7-4+b1 [51.1 kB]
Get:61 http://172.17.0.1/private buster-staging/main armhf libavahi-client3 armhf 0.7-4+b1 [54.0 kB]
Get:62 http://172.17.0.1/private buster-staging/main armhf libcups2 armhf 2.2.10-4 [286 kB]
Get:63 http://172.17.0.1/private buster-staging/main armhf liblcms2-2 armhf 2.9-3 [116 kB]
Get:64 http://172.17.0.1/private buster-staging/main armhf libasound2-data all 1.1.8-1 [59.6 kB]
Get:65 http://172.17.0.1/private buster-staging/main armhf libasound2 armhf 1.1.8-1 [304 kB]
Get:66 http://172.17.0.1/private buster-staging/main armhf libpcsclite1 armhf 1.8.24-1 [55.5 kB]
Get:67 http://172.17.0.1/private buster-staging/main armhf openjdk-11-jre-headless armhf 11.0.2+9-3 [32.7 MB]
Get:68 http://172.17.0.1/private buster-staging/main armhf default-jre-headless armhf 2:1.11-71+b1 [11.1 kB]
Get:69 http://172.17.0.1/private buster-staging/main armhf ant all 1.10.5-2 [2082 kB]
Get:70 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:71 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-2 [185 kB]
Get:72 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:73 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:74 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.16.1-4 [771 kB]
Get:75 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-9 [434 kB]
Get:76 http://172.17.0.1/private buster-staging/main armhf ocl-icd-libopencl1 armhf 2.2.12-2 [35.7 kB]
Get:77 http://172.17.0.1/private buster-staging/main armhf clinfo armhf 2.2.18.04.06-1 [34.3 kB]
Get:78 http://172.17.0.1/private buster-staging/main armhf libdconf1 armhf 0.30.1-2 [36.3 kB]
Get:79 http://172.17.0.1/private buster-staging/main armhf dconf-service armhf 0.30.1-2 [33.3 kB]
Get:80 http://172.17.0.1/private buster-staging/main armhf dconf-gsettings-backend armhf 0.30.1-2 [24.7 kB]
Get:81 http://172.17.0.1/private buster-staging/main armhf dctrl-tools armhf 2.24-3 [94.2 kB]
Get:82 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-9 [547 kB]
Get:83 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:84 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.64-1 [96.8 kB]
Get:85 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 1.1.1-1 [19.7 kB]
Get:86 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 1.1.1-1 [13.0 kB]
Get:87 http://172.17.0.1/private buster-staging/main armhf libelf1 armhf 0.176-1 [158 kB]
Get:88 http://172.17.0.1/private buster-staging/main armhf dwz armhf 0.12-3 [66.0 kB]
Get:89 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-9 [1219 kB]
Get:90 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:91 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:92 http://172.17.0.1/private buster-staging/main armhf debhelper all 12.1 [1015 kB]
Get:93 http://172.17.0.1/private buster-staging/main armhf libatk1.0-data all 2.30.0-2 [145 kB]
Get:94 http://172.17.0.1/private buster-staging/main armhf libatk1.0-0 armhf 2.30.0-2 [42.7 kB]
Get:95 http://172.17.0.1/private buster-staging/main armhf libatspi2.0-0 armhf 2.30.0-7 [54.3 kB]
Get:96 http://172.17.0.1/private buster-staging/main armhf libatk-bridge2.0-0 armhf 2.30.0-4 [51.0 kB]
Get:97 http://172.17.0.1/private buster-staging/main armhf libcairo-gobject2 armhf 1.16.0-2 [123 kB]
Get:98 http://172.17.0.1/private buster-staging/main armhf libcolord2 armhf 1.4.3-4 [119 kB]
Get:99 http://172.17.0.1/private buster-staging/main armhf libepoxy0 armhf 1.5.3-0.1 [167 kB]
Get:100 http://172.17.0.1/private buster-staging/main armhf libjson-glib-1.0-common all 1.4.4-2 [52.3 kB]
Get:101 http://172.17.0.1/private buster-staging/main armhf libjson-glib-1.0-0 armhf 1.4.4-2 [52.7 kB]
Get:102 http://172.17.0.1/private buster-staging/main armhf libpsl5 armhf 0.20.2-2 [52.6 kB]
Get:103 http://172.17.0.1/private buster-staging/main armhf libproxy1v5 armhf 0.4.15-5 [49.8 kB]
Get:104 http://172.17.0.1/private buster-staging/main armhf glib-networking-common all 2.58.0-2 [59.3 kB]
Get:105 http://172.17.0.1/private buster-staging/main armhf glib-networking-services armhf 2.58.0-2 [13.0 kB]
Get:106 http://172.17.0.1/private buster-staging/main armhf gsettings-desktop-schemas all 3.28.1-1 [529 kB]
Get:107 http://172.17.0.1/private buster-staging/main armhf glib-networking armhf 2.58.0-2 [47.7 kB]
Get:108 http://172.17.0.1/private buster-staging/main armhf libsoup2.4-1 armhf 2.64.2-2 [216 kB]
Get:109 http://172.17.0.1/private buster-staging/main armhf libsoup-gnome2.4-1 armhf 2.64.2-2 [17.5 kB]
Get:110 http://172.17.0.1/private buster-staging/main armhf librest-0.7-0 armhf 0.8.1-1 [27.8 kB]
Get:111 http://172.17.0.1/private buster-staging/main armhf libwayland-client0 armhf 1.16.0-1 [21.2 kB]
Get:112 http://172.17.0.1/private buster-staging/main armhf libwayland-cursor0 armhf 1.16.0-1 [13.0 kB]
Get:113 http://172.17.0.1/private buster-staging/main armhf libwayland-egl1 armhf 1.16.0-1 [8008 B]
Get:114 http://172.17.0.1/private buster-staging/main armhf libxcursor1 armhf 1:1.1.15-2 [33.5 kB]
Get:115 http://172.17.0.1/private buster-staging/main armhf libxinerama1 armhf 2:1.1.4-2 [17.3 kB]
Get:116 http://172.17.0.1/private buster-staging/main armhf xkb-data all 2.26-2 [681 kB]
Get:117 http://172.17.0.1/private buster-staging/main armhf libxkbcommon0 armhf 0.8.2-1 [110 kB]
Get:118 http://172.17.0.1/private buster-staging/main armhf libgtk-3-common all 3.24.5-1 [3678 kB]
Get:119 http://172.17.0.1/private buster-staging/main armhf libgtk-3-0 armhf 3.24.5-1 [2134 kB]
Get:120 http://172.17.0.1/private buster-staging/main armhf libglvnd0 armhf 1.1.0-1 [54.5 kB]
Get:121 http://172.17.0.1/private buster-staging/main armhf libglapi-mesa armhf 18.3.4-1 [73.8 kB]
Get:122 http://172.17.0.1/private buster-staging/main armhf libx11-xcb1 armhf 2:1.6.7-1 [190 kB]
Get:123 http://172.17.0.1/private buster-staging/main armhf libxcb-dri2-0 armhf 1.13.1-2 [100 kB]
Get:124 http://172.17.0.1/private buster-staging/main armhf libxcb-dri3-0 armhf 1.13.1-2 [100 kB]
Get:125 http://172.17.0.1/private buster-staging/main armhf libxcb-glx0 armhf 1.13.1-2 [114 kB]
Get:126 http://172.17.0.1/private buster-staging/main armhf libxcb-present0 armhf 1.13.1-2 [99.1 kB]
Get:127 http://172.17.0.1/private buster-staging/main armhf libxcb-sync1 armhf 1.13.1-2 [102 kB]
Get:128 http://172.17.0.1/private buster-staging/main armhf libxshmfence1 armhf 1.3-1 [8636 B]
Get:129 http://172.17.0.1/private buster-staging/main armhf libdrm-amdgpu1 armhf 2.4.97-1+rpi1 [26.1 kB]
Get:130 http://172.17.0.1/private buster-staging/main armhf libdrm-etnaviv1 armhf 2.4.97-1+rpi1 [20.0 kB]
Get:131 http://172.17.0.1/private buster-staging/main armhf libdrm-nouveau2 armhf 2.4.97-1+rpi1 [24.4 kB]
Get:132 http://172.17.0.1/private buster-staging/main armhf libdrm-radeon1 armhf 2.4.97-1+rpi1 [28.6 kB]
Get:133 http://172.17.0.1/private buster-staging/main armhf libedit2 armhf 3.1-20181209-1 [78.7 kB]
Get:134 http://172.17.0.1/private buster-staging/main armhf libllvm7 armhf 1:7.0.1-6+rpi1 [11.2 MB]
Get:135 http://172.17.0.1/private buster-staging/main armhf libsensors-config all 1:3.5.0-3 [31.6 kB]
Get:136 http://172.17.0.1/private buster-staging/main armhf libsensors5 armhf 1:3.5.0-3 [49.5 kB]
Get:137 http://172.17.0.1/private buster-staging/main armhf libgl1-mesa-dri armhf 18.3.4-1 [4716 kB]
Get:138 http://172.17.0.1/private buster-staging/main armhf libglx-mesa0 armhf 18.3.4-1 [168 kB]
Get:139 http://172.17.0.1/private buster-staging/main armhf libglx0 armhf 1.1.0-1 [24.6 kB]
Get:140 http://172.17.0.1/private buster-staging/main armhf libgl1 armhf 1.1.0-1 [107 kB]
Get:141 http://172.17.0.1/private buster-staging/main armhf libgl1-mesa-glx armhf 18.3.4-1 [46.9 kB]
Get:142 http://172.17.0.1/private buster-staging/main armhf libgif7 armhf 5.1.4-3 [41.0 kB]
Get:143 http://172.17.0.1/private buster-staging/main armhf openjdk-11-jre armhf 11.0.2+9-3 [30.6 kB]
Get:144 http://172.17.0.1/private buster-staging/main armhf default-jre armhf 2:1.11-71+b1 [1044 B]
Get:145 http://172.17.0.1/private buster-staging/main armhf openjdk-11-jdk-headless armhf 11.0.2+9-3 [185 MB]
Get:146 http://172.17.0.1/private buster-staging/main armhf default-jdk-headless armhf 2:1.11-71+b1 [1108 B]
Get:147 http://172.17.0.1/private buster-staging/main armhf openjdk-11-jdk armhf 11.0.2+9-3 [2075 kB]
Get:148 http://172.17.0.1/private buster-staging/main armhf default-jdk armhf 2:1.11-71+b1 [1060 B]
Get:149 http://172.17.0.1/private buster-staging/main armhf libfile-which-perl all 1.23-1 [16.6 kB]
Get:150 http://172.17.0.1/private buster-staging/main armhf libfile-homedir-perl all 1.004-1 [42.7 kB]
Get:151 http://172.17.0.1/private buster-staging/main armhf libio-pty-perl armhf 1:1.08-1.1+b4 [33.0 kB]
Get:152 http://172.17.0.1/private buster-staging/main armhf libipc-run-perl all 20180523.0-1 [101 kB]
Get:153 http://172.17.0.1/private buster-staging/main armhf libclass-method-modifiers-perl all 2.12-1 [18.6 kB]
Get:154 http://172.17.0.1/private buster-staging/main armhf libsub-exporter-progressive-perl all 0.001013-1 [7588 B]
Get:155 http://172.17.0.1/private buster-staging/main armhf libdevel-globaldestruction-perl all 0.14-1 [8084 B]
Get:156 http://172.17.0.1/private buster-staging/main armhf libb-hooks-op-check-perl armhf 0.22-1+b1 [11.1 kB]
Get:157 http://172.17.0.1/private buster-staging/main armhf libdynaloader-functions-perl all 0.003-1 [12.6 kB]
Get:158 http://172.17.0.1/private buster-staging/main armhf libdevel-callchecker-perl armhf 0.008-1 [15.5 kB]
Get:159 http://172.17.0.1/private buster-staging/main armhf libparams-classify-perl armhf 0.015-1+b1 [24.3 kB]
Get:160 http://172.17.0.1/private buster-staging/main armhf libmodule-runtime-perl all 0.016-1 [19.4 kB]
Get:161 http://172.17.0.1/private buster-staging/main armhf libimport-into-perl all 1.002005-1 [11.6 kB]
Get:162 http://172.17.0.1/private buster-staging/main armhf librole-tiny-perl all 2.000006-1 [19.4 kB]
Get:163 http://172.17.0.1/private buster-staging/main armhf libstrictures-perl all 2.000005-1 [18.3 kB]
Get:164 http://172.17.0.1/private buster-staging/main armhf libsub-quote-perl all 2.005001-1 [17.9 kB]
Get:165 http://172.17.0.1/private buster-staging/main armhf libmoo-perl all 2.003004-2 [57.4 kB]
Get:166 http://172.17.0.1/private buster-staging/main armhf libencode-locale-perl all 1.05-1 [13.7 kB]
Get:167 http://172.17.0.1/private buster-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:168 http://172.17.0.1/private buster-staging/main armhf libhttp-date-perl all 6.02-1 [10.7 kB]
Get:169 http://172.17.0.1/private buster-staging/main armhf libfile-listing-perl all 6.04-1 [10.3 kB]
Get:170 http://172.17.0.1/private buster-staging/main armhf libhtml-tagset-perl all 3.20-3 [12.7 kB]
Get:171 http://172.17.0.1/private buster-staging/main armhf liburi-perl all 1.76-1 [89.9 kB]
Get:172 http://172.17.0.1/private buster-staging/main armhf libhtml-parser-perl armhf 3.72-3+b2 [101 kB]
Get:173 http://172.17.0.1/private buster-staging/main armhf libhtml-tree-perl all 5.07-2 [213 kB]
Get:174 http://172.17.0.1/private buster-staging/main armhf libio-html-perl all 1.001-1 [17.6 kB]
Get:175 http://172.17.0.1/private buster-staging/main armhf liblwp-mediatypes-perl all 6.02-1 [22.1 kB]
Get:176 http://172.17.0.1/private buster-staging/main armhf libhttp-message-perl all 6.18-1 [77.8 kB]
Get:177 http://172.17.0.1/private buster-staging/main armhf libhttp-cookies-perl all 6.04-1 [17.8 kB]
Get:178 http://172.17.0.1/private buster-staging/main armhf libhttp-negotiate-perl all 6.01-1 [12.8 kB]
Get:179 http://172.17.0.1/private buster-staging/main armhf perl-openssl-defaults armhf 3 [6782 B]
Get:180 http://172.17.0.1/private buster-staging/main armhf libnet-ssleay-perl armhf 1.85-2+b1 [286 kB]
Get:181 http://172.17.0.1/private buster-staging/main armhf libio-socket-ssl-perl all 2.060-3 [207 kB]
Get:182 http://172.17.0.1/private buster-staging/main armhf libnet-http-perl all 6.18-1 [24.5 kB]
Get:183 http://172.17.0.1/private buster-staging/main armhf liblwp-protocol-https-perl all 6.07-2 [9242 B]
Get:184 http://172.17.0.1/private buster-staging/main armhf libtry-tiny-perl all 0.30-1 [23.3 kB]
Get:185 http://172.17.0.1/private buster-staging/main armhf libwww-robotrules-perl all 6.02-1 [12.9 kB]
Get:186 http://172.17.0.1/private buster-staging/main armhf libwww-perl all 6.36-1 [188 kB]
Get:187 http://172.17.0.1/private buster-staging/main armhf patchutils armhf 0.3.4-2 [83.1 kB]
Get:188 http://172.17.0.1/private buster-staging/main armhf wdiff armhf 1.2.2-2 [120 kB]
Get:189 http://172.17.0.1/private buster-staging/main armhf devscripts armhf 2.19.3 [1043 kB]
Get:190 http://172.17.0.1/private buster-staging/main armhf dh-linktree all 0.6 [10.7 kB]
Get:191 http://172.17.0.1/private buster-staging/main armhf libllvm6.0 armhf 1:6.0.1-10+rpi1 [12.5 MB]
Get:192 http://172.17.0.1/private buster-staging/main armhf libclang1-6.0 armhf 1:6.0.1-10+rpi1 [5679 kB]
Get:193 http://172.17.0.1/private buster-staging/main armhf libxapian30 armhf 1.4.10-1 [958 kB]
Get:194 http://172.17.0.1/private buster-staging/main armhf doxygen armhf 1.8.13-10 [3257 kB]
Get:195 http://172.17.0.1/private buster-staging/main armhf libcdt5 armhf 2.40.1-5+b2 [58.4 kB]
Get:196 http://172.17.0.1/private buster-staging/main armhf libcgraph6 armhf 2.40.1-5+b2 [77.5 kB]
Get:197 http://172.17.0.1/private buster-staging/main armhf libgd3 armhf 2.2.5-5.1 [114 kB]
Get:198 http://172.17.0.1/private buster-staging/main armhf libgts-0.7-5 armhf 0.7.6+darcs121130-4 [134 kB]
Get:199 http://172.17.0.1/private buster-staging/main armhf libltdl7 armhf 2.4.6-9 [387 kB]
Get:200 http://172.17.0.1/private buster-staging/main armhf libpathplan4 armhf 2.40.1-5+b2 [61.5 kB]
Get:201 http://172.17.0.1/private buster-staging/main armhf libxdot4 armhf 2.40.1-5+b2 [55.8 kB]
Get:202 http://172.17.0.1/private buster-staging/main armhf libgvc6 armhf 2.40.1-5+b2 [544 kB]
Get:203 http://172.17.0.1/private buster-staging/main armhf libgvpr2 armhf 2.40.1-5+b2 [188 kB]
Get:204 http://172.17.0.1/private buster-staging/main armhf liblab-gamut1 armhf 2.40.1-5+b2 [221 kB]
Get:205 http://172.17.0.1/private buster-staging/main armhf libsm6 armhf 2:1.2.3-1 [32.9 kB]
Get:206 http://172.17.0.1/private buster-staging/main armhf libxmu6 armhf 2:1.1.2-2 [52.0 kB]
Get:207 http://172.17.0.1/private buster-staging/main armhf libxaw7 armhf 2:1.0.13-1 [164 kB]
Get:208 http://172.17.0.1/private buster-staging/main armhf graphviz armhf 2.40.1-5+b2 [497 kB]
Get:209 http://172.17.0.1/private buster-staging/main armhf javahelper all 0.72.1 [92.9 kB]
Get:210 http://172.17.0.1/private buster-staging/main armhf libjs-jquery all 3.3.1~dfsg-1 [332 kB]
Get:211 http://172.17.0.1/private buster-staging/main armhf opencl-c-headers all 2.2~2019.01.17-g49f07d3-1 [31.3 kB]
Get:212 http://172.17.0.1/private buster-staging/main armhf ocl-icd-opencl-dev armhf 2.2.12-2 [10.7 kB]
Get:213 http://172.17.0.1/private buster-staging/main armhf dh-exec armhf 0.23.1 [25.1 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 321 MB in 33s (9638 kB/s)
Selecting previously unselected package libbsd0:armhf.
(Reading database ... 15799 files and directories currently installed.)
Preparing to unpack .../0-libbsd0_0.9.1-1_armhf.deb ...
Unpacking libbsd0:armhf (0.9.1-1) ...
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Preparing to unpack .../1-bsdmainutils_11.1.2_armhf.deb ...
Unpacking bsdmainutils (11.1.2) ...
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Preparing to unpack .../2-libuchardet0_0.0.6-3_armhf.deb ...
Unpacking libuchardet0:armhf (0.0.6-3) ...
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Preparing to unpack .../3-groff-base_1.22.4-2_armhf.deb ...
Unpacking groff-base (1.22.4-2) ...
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Installing new version of config file /etc/mime.types ...
Setting up libicu63:armhf (63.1-6) ...
Setting up libio-pty-perl (1:1.08-1.1+b4) ...
Setting up libdrm-amdgpu1:armhf (2.4.97-1+rpi1) ...
Setting up libfile-which-perl (1.23-1) ...
Setting up libencode-locale-perl (1.05-1) ...
Setting up libtimedate-perl (2.3000-2) ...
Setting up liblcms2-2:armhf (2.9-3) ...
Setting up libjbig0:armhf (2.1-3.1+b2) ...
Setting up libpcsclite1:armhf (1.8.24-1) ...
Setting up libsigsegv2:armhf (2.12-2) ...
Setting up librole-tiny-perl (2.000006-1) ...
Setting up fonts-dejavu-core (2.37-1) ...
Setting up perl-openssl-defaults:armhf (3) ...
Setting up libpsl5:armhf (0.20.2-2) ...
Setting up libfile-homedir-perl (1.004-1) ...
Setting up libelf1:armhf (0.176-1) ...
Setting up libb-hooks-op-check-perl (0.22-1+b1) ...
Setting up libglib2.0-0:armhf (2.58.3-1) ...
Setting up libasound2-data (1.1.8-1) ...
Setting up libxshmfence1:armhf (1.3-1) ...
Setting up libio-html-perl (1.001-1) ...
Setting up libwayland-client0:armhf (1.16.0-1) ...
Setting up xkb-data (2.26-2) ...
Setting up libproxy1v5:armhf (0.4.15-5) ...
Setting up java-common (0.71) ...
Setting up dctrl-tools (2.24-3) ...
Setting up libgdk-pixbuf2.0-common (2.38.0+dfsg-7) ...
Setting up glib-networking-services (2.58.0-2) ...
Setting up libdatrie1:armhf (0.2.12-2) ...
Setting up gettext-base (0.19.8.1-9) ...
Setting up libgif7:armhf (5.1.4-3) ...
Setting up libpipeline1:armhf (1.5.1-2) ...
Setting up libglapi-mesa:armhf (18.3.4-1) ...
Setting up m4 (1.4.18-2) ...
Setting up libbsd0:armhf (0.9.1-1) ...
Setting up libsensors5:armhf (1:3.5.0-3) ...
Setting up libnspr4:armhf (2:4.20-1) ...
Setting up ucf (3.0038+nmu1) ...
Setting up libxml2:armhf (2.9.4+dfsg1-7+b1) ...
Setting up libdynaloader-functions-perl (0.003-1) ...
Setting up libuchardet0:armhf (0.0.6-3) ...
Setting up libfreetype6:armhf (2.9.1-3) ...
Setting up libmagic-mgc (1:5.35-2) ...
Setting up libasound2:armhf (1.1.8-1) ...
Setting up libmagic1:armhf (1:5.35-2) ...
Setting up libjson-glib-1.0-0:armhf (1.4.4-2) ...
Setting up libgraphite2-3:armhf (1.3.13-7) ...
Setting up libcroco3:armhf (0.6.12-3) ...
Setting up libatk1.0-data (2.30.0-2) ...
Setting up libstrictures-perl (2.000005-1) ...
Setting up libx11-xcb1:armhf (2:1.6.7-1) ...
Setting up libpixman-1-0:armhf (0.36.0-1) ...
Setting up liblwp-mediatypes-perl (6.02-1) ...
Processing triggers for libc-bin (2.28-6+rpi1) ...
Setting up dwz (0.12-3) ...
Setting up patchutils (0.3.4-2) ...
Setting up libepoxy0:armhf (1.5.3-0.1) ...
Setting up autotools-dev (20180224.1) ...
Setting up liburi-perl (1.76-1) ...
Setting up libatk1.0-0:armhf (2.30.0-2) ...
Processing triggers for systemd (240-5+rpi1) ...
Setting up libltdl7:armhf (2.4.6-9) ...
Setting up libdrm-etnaviv1:armhf (2.4.97-1+rpi1) ...
Setting up libhtml-parser-perl (3.72-3+b2) ...
Setting up libipc-run-perl (20180523.0-1) ...
Setting up libdevel-globaldestruction-perl (0.14-1) ...
Setting up libdconf1:armhf (0.30.1-2) ...
Setting up libfribidi0:armhf (1.0.5-3.1) ...
Setting up wdiff (1.2.2-2) ...
Setting up shared-mime-info (1.10-1) ...
Setting up libxkbcommon0:armhf (0.8.2-1) ...
Setting up libnet-http-perl (6.18-1) ...
Setting up libdrm-radeon1:armhf (2.4.97-1+rpi1) ...
Setting up libcolord2:armhf (1.4.3-4) ...
Setting up libthai-data (0.1.28-2) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up ocl-icd-libopencl1:armhf (2.2.12-2) ...
Setting up libdrm-nouveau2:armhf (2.4.97-1+rpi1) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up x11-common (1:7.7+19) ...
update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
Running in chroot, ignoring request.
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of restart.
Processing triggers for ca-certificates (20190110) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Setting up hicolor-icon-theme (0.17-2) ...
Setting up libsub-quote-perl (2.005001-1) ...
Setting up libwww-robotrules-perl (6.02-1) ...
Setting up libwayland-cursor0:armhf (1.16.0-1) ...
Setting up libcdt5 (2.40.1-5+b2) ...
Setting up libwayland-egl1:armhf (1.16.0-1) ...
Setting up libx11-data (2:1.6.7-1) ...
Setting up libxau6:armhf (1:1.0.8-1+b2) ...
Setting up autopoint (0.19.8.1-9) ...
Setting up libmpdec2:armhf (2.4.2-2) ...
Setting up libavahi-common-data:armhf (0.7-4+b1) ...
Setting up libcgraph6 (2.40.1-5+b2) ...
Setting up libwebp6:armhf (0.6.1-2) ...
Setting up libfile-stripnondeterminism-perl (1.1.1-1) ...
Setting up libedit2:armhf (3.1-20181209-1) ...
Setting up libgts-0.7-5:armhf (0.7.6+darcs121130-4) ...
Setting up libpython3.7-stdlib:armhf (3.7.2-2) ...
Setting up fontconfig-config (2.13.1-2) ...
Installing new version of config file /etc/fonts/fonts.conf ...
Setting up libhttp-date-perl (6.02-1) ...
Setting up libllvm6.0:armhf (1:6.0.1-10+rpi1) ...
Setting up dconf-service (0.30.1-2) ...
Setting up gettext (0.19.8.1-9) ...
Setting up libnet-ssleay-perl (1.85-2+b1) ...
Setting up libgvpr2 (2.40.1-5+b2) ...
Setting up libllvm7:armhf (1:7.0.1-6+rpi1) ...
Setting up ocl-icd-opencl-dev:armhf (2.2.12-2) ...
Setting up groff-base (1.22.4-2) ...
Setting up libdevel-callchecker-perl (0.008-1) ...
Setting up libgl1-mesa-dri:armhf (18.3.4-1) ...
Setting up libclang1-6.0:armhf (1:6.0.1-10+rpi1) ...
Setting up libnss3:armhf (2:3.42.1-1) ...
Setting up libharfbuzz0b:armhf (2.3.1-1) ...
Setting up libtiff5:armhf (4.0.10-4) ...
Setting up python3.7 (3.7.2-2) ...
Setting up autoconf (2.69-11) ...
Setting up libthai0:armhf (0.1.28-2) ...
Setting up file (1:5.35-2) ...
Setting up clinfo (2.2.18.04.06-1) ...
Setting up libio-socket-ssl-perl (2.060-3) ...
Setting up libhtml-tree-perl (5.07-2) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up automake (1:1.16.1-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libice6:armhf (2:1.0.9-2) ...
Setting up libfile-listing-perl (6.04-1) ...
Setting up man-db (2.8.5-2) ...
Not building database; man-db/auto-update is not 'true'.
Created symlink /etc/systemd/system/timers.target.wants/man-db.timer -> /lib/systemd/system/man-db.timer.
Setting up libhttp-message-perl (6.18-1) ...
Setting up libavahi-common3:armhf (0.7-4+b1) ...
Setting up dconf-gsettings-backend:armhf (0.30.1-2) ...
Setting up libparams-classify-perl (0.015-1+b1) ...
Setting up libxcb1:armhf (1.13.1-2) ...
Setting up libhttp-negotiate-perl (6.01-1) ...
Setting up libtool (2.4.6-9) ...
Setting up libpython3-stdlib:armhf (3.7.2-1) ...
Setting up libxcb-present0:armhf (1.13.1-2) ...
Setting up libfontconfig1:armhf (2.13.1-2) ...
Setting up libxcb-dri2-0:armhf (1.13.1-2) ...
Setting up libsm6:armhf (2:1.2.3-1) ...
Setting up libxcb-dri3-0:armhf (1.13.1-2) ...
Setting up libxcb-glx0:armhf (1.13.1-2) ...
Setting up libxcb-render0:armhf (1.13.1-2) ...
Setting up po-debconf (1.0.21) ...
Setting up gsettings-desktop-schemas (3.28.1-1) ...
Setting up python3 (3.7.2-1) ...
Setting up libhttp-cookies-perl (6.04-1) ...
Setting up libgtk-3-common (3.24.5-1) ...
Setting up libmodule-runtime-perl (0.016-1) ...
Setting up libx11-6:armhf (2:1.6.7-1) ...
Setting up doxygen (1.8.13-10) ...
Setting up libxcb-sync1:armhf (1.13.1-2) ...
Setting up glib-networking:armhf (2.58.0-2) ...
Setting up libxcomposite1:armhf (1:0.4.4-2) ...
Setting up libxcb-shm0:armhf (1.13.1-2) ...
Setting up libxpm4:armhf (1:3.5.12-1) ...
Setting up libxt6:armhf (1:1.1.5-1) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up libavahi-client3:armhf (0.7-4+b1) ...
Setting up fontconfig (2.13.1-2) ...
Regenerating fonts cache... done.
Setting up libcups2:armhf (2.2.10-4) ...
Setting up libimport-into-perl (1.002005-1) ...
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up libxfixes3:armhf (1:5.0.3-1) ...
Setting up libatspi2.0-0:armhf (2.30.0-7) ...
Setting up libgdk-pixbuf2.0-0:armhf (2.38.0+dfsg-7) ...
Setting up libsoup2.4-1:armhf (2.64.2-2) ...
Setting up libgd3:armhf (2.2.5-5.1) ...
Setting up libsoup-gnome2.4-1:armhf (2.64.2-2) ...
Setting up libxmu6:armhf (2:1.1.2-2) ...
Setting up gtk-update-icon-cache (3.24.5-1) ...
Setting up libxcursor1:armhf (1:1.1.15-2) ...
Setting up libpango-1.0-0:armhf (1.42.4-6) ...
Setting up libatk-bridge2.0-0:armhf (2.30.0-4) ...
Setting up libmoo-perl (2.003004-2) ...
Setting up librest-0.7-0:armhf (0.8.1-1) ...
Setting up libxxf86vm1:armhf (1:1.1.4-1+b2) ...
Setting up libxrandr2:armhf (2:1.5.1-1) ...
Setting up libxi6:armhf (2:1.7.9-1) ...
Setting up libxaw7:armhf (2:1.0.13-1) ...
Setting up libcairo2:armhf (1.16.0-2) ...
Setting up libxinerama1:armhf (2:1.1.4-2) ...
Setting up libxdamage1:armhf (1:1.1.4-3) ...
Setting up libcairo-gobject2:armhf (1.16.0-2) ...
Setting up libxtst6:armhf (2:1.2.3-1) ...
Setting up libpangoft2-1.0-0:armhf (1.42.4-6) ...
Setting up libglx-mesa0:armhf (18.3.4-1) ...
Setting up libpangocairo-1.0-0:armhf (1.42.4-6) ...
Setting up libglx0:armhf (1.1.0-1) ...
Setting up libgvc6 (2.40.1-5+b2) ...
Setting up librsvg2-2:armhf (2.44.10-1+rpi1) ...
Setting up librsvg2-common:armhf (2.44.10-1+rpi1) ...
Setting up libgl1:armhf (1.1.0-1) ...
Setting up adwaita-icon-theme (3.30.1-1) ...
update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode
Setting up graphviz (2.40.1-5+b2) ...
Setting up libgtk-3-0:armhf (3.24.5-1) ...
Setting up libgl1-mesa-glx:armhf (18.3.4-1) ...
Setting up default-jre-headless (2:1.11-71+b1) ...
Setting up ca-certificates-java (20190214) ...
head: cannot open '/etc/ssl/certs/java/cacerts' for reading: No such file or directory
Adding debian:ACCVRAIZ1.pem
Adding debian:Actalis_Authentication_Root_CA.pem
Adding debian:AddTrust_External_Root.pem
Adding debian:AffirmTrust_Commercial.pem
Adding debian:AffirmTrust_Networking.pem
Adding debian:AffirmTrust_Premium.pem
Adding debian:AffirmTrust_Premium_ECC.pem
Adding debian:Atos_TrustedRoot_2011.pem
Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem
Adding debian:Baltimore_CyberTrust_Root.pem
Adding debian:Buypass_Class_2_Root_CA.pem
Adding debian:Buypass_Class_3_Root_CA.pem
Adding debian:CA_Disig_Root_R2.pem
Adding debian:CFCA_EV_ROOT.pem
Adding debian:COMODO_Certification_Authority.pem
Adding debian:COMODO_ECC_Certification_Authority.pem
Adding debian:COMODO_RSA_Certification_Authority.pem
Adding debian:Certigna.pem
Adding debian:Certinomis_-_Root_CA.pem
Adding debian:Certplus_Class_2_Primary_CA.pem
Adding debian:Certum_Trusted_Network_CA.pem
Adding debian:Certum_Trusted_Network_CA_2.pem
Adding debian:Chambers_of_Commerce_Root_-_2008.pem
Adding debian:Comodo_AAA_Services_root.pem
Adding debian:Cybertrust_Global_Root.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem
Adding debian:DST_Root_CA_X3.pem
Adding debian:Deutsche_Telekom_Root_CA_2.pem
Adding debian:DigiCert_Assured_ID_Root_CA.pem
Adding debian:DigiCert_Assured_ID_Root_G2.pem
Adding debian:DigiCert_Assured_ID_Root_G3.pem
Adding debian:DigiCert_Global_Root_CA.pem
Adding debian:DigiCert_Global_Root_G2.pem
Adding debian:DigiCert_Global_Root_G3.pem
Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem
Adding debian:DigiCert_Trusted_Root_G4.pem
Adding debian:E-Tugra_Certification_Authority.pem
Adding debian:EC-ACC.pem
Adding debian:EE_Certification_Centre_Root_CA.pem
Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem
Adding debian:Entrust_Root_Certification_Authority.pem
Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem
Adding debian:Entrust_Root_Certification_Authority_-_G2.pem
Adding debian:GeoTrust_Global_CA.pem
Adding debian:GeoTrust_Primary_Certification_Authority.pem
Adding debian:GeoTrust_Primary_Certification_Authority_-_G2.pem
Adding debian:GeoTrust_Primary_Certification_Authority_-_G3.pem
Adding debian:GeoTrust_Universal_CA.pem
Adding debian:GeoTrust_Universal_CA_2.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem
Adding debian:GlobalSign_Root_CA.pem
Adding debian:GlobalSign_Root_CA_-_R2.pem
Adding debian:GlobalSign_Root_CA_-_R3.pem
Adding debian:Global_Chambersign_Root_-_2008.pem
Adding debian:Go_Daddy_Class_2_CA.pem
Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2011.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem
Adding debian:Hongkong_Post_Root_CA_1.pem
Adding debian:ISRG_Root_X1.pem
Adding debian:IdenTrust_Commercial_Root_CA_1.pem
Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem
Adding debian:Izenpe.com.pem
Adding debian:Microsec_e-Szigno_Root_CA_2009.pem
Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem
Adding debian:Network_Solutions_Certificate_Authority.pem
Adding debian:OISTE_WISeKey_Global_Root_GA_CA.pem
Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem
Adding debian:QuoVadis_Root_CA.pem
Adding debian:QuoVadis_Root_CA_1_G3.pem
Adding debian:QuoVadis_Root_CA_2.pem
Adding debian:QuoVadis_Root_CA_2_G3.pem
Adding debian:QuoVadis_Root_CA_3.pem
Adding debian:QuoVadis_Root_CA_3_G3.pem
Adding debian:SZAFIR_ROOT_CA2.pem
Adding debian:SecureSign_RootCA11.pem
Adding debian:SecureTrust_CA.pem
Adding debian:Secure_Global_CA.pem
Adding debian:Security_Communication_RootCA2.pem
Adding debian:Security_Communication_Root_CA.pem
Adding debian:Sonera_Class_2_Root_CA.pem
Adding debian:Staat_der_Nederlanden_EV_Root_CA.pem
Adding debian:Staat_der_Nederlanden_Root_CA_-_G2.pem
Adding debian:Staat_der_Nederlanden_Root_CA_-_G3.pem
Adding debian:Starfield_Class_2_CA.pem
Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem
Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem
Adding debian:SwissSign_Gold_CA_-_G2.pem
Adding debian:SwissSign_Silver_CA_-_G2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_3.pem
Adding debian:TWCA_Global_Root_CA.pem
Adding debian:TWCA_Root_Certification_Authority.pem
Adding debian:Taiwan_GRCA.pem
Adding debian:TeliaSonera_Root_CA_v1.pem
Adding debian:Trustis_FPS_Root_CA.pem
Adding debian:USERTrust_ECC_Certification_Authority.pem
Adding debian:USERTrust_RSA_Certification_Authority.pem
Adding debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G4.pem
Adding debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G5.pem
Adding debian:VeriSign_Universal_Root_Certification_Authority.pem
Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority_-_G3.pem
Adding debian:XRamp_Global_CA_Root.pem
Adding debian:certSIGN_ROOT_CA.pem
Adding debian:ePKI_Root_Certification_Authority.pem
Adding debian:thawte_Primary_Root_CA.pem
Adding debian:thawte_Primary_Root_CA_-_G2.pem
Adding debian:thawte_Primary_Root_CA_-_G3.pem
Adding debian:AC_RAIZ_FNMT-RCM.pem
Adding debian:Amazon_Root_CA_1.pem
Adding debian:Amazon_Root_CA_2.pem
Adding debian:Amazon_Root_CA_3.pem
Adding debian:Amazon_Root_CA_4.pem
Adding debian:LuxTrust_Global_Root_2.pem
Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem
Adding debian:GDCA_TrustAUTH_R5_ROOT.pem
Adding debian:GlobalSign_Root_CA_-_R6.pem
Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem
Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem
Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem
Adding debian:SSL.com_Root_Certification_Authority_ECC.pem
Adding debian:SSL.com_Root_Certification_Authority_RSA.pem
Adding debian:TrustCor_ECA-1.pem
Adding debian:TrustCor_RootCert_CA-1.pem
Adding debian:TrustCor_RootCert_CA-2.pem
done.
Setting up dh-autoreconf (19) ...
Setting up liblwp-protocol-https-perl (6.07-2) ...
Setting up openjdk-11-jre-headless:armhf (11.0.2+9-3) ...
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/rmid to provide /usr/bin/rmid (rmid) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/java to provide /usr/bin/java (java) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jjs to provide /usr/bin/jjs (jjs) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/pack200 to provide /usr/bin/pack200 (pack200) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/unpack200 to provide /usr/bin/unpack200 (unpack200) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode
Setting up openjdk-11-jdk-headless:armhf (11.0.2+9-3) ...
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jar to provide /usr/bin/jar (jar) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/javac to provide /usr/bin/javac (javac) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/javap to provide /usr/bin/javap (javap) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jps to provide /usr/bin/jps (jps) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/rmic to provide /usr/bin/rmic (rmic) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode
Setting up dh-strip-nondeterminism (1.1.1-1) ...
Setting up ant (1.10.5-2) ...
Setting up default-jdk-headless (2:1.11-71+b1) ...
Setting up libwww-perl (6.36-1) ...
Setting up openjdk-11-jre:armhf (11.0.2+9-3) ...
Setting up debhelper (12.1) ...
Setting up dh-linktree (0.6) ...
Setting up default-jre (2:1.11-71+b1) ...
Setting up devscripts (2.19.3) ...
Setting up dh-exec (0.23.1) ...
Setting up javahelper (0.72.1) ...
Setting up openjdk-11-jdk:armhf (11.0.2+9-3) ...
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode
Setting up default-jdk (2:1.11-71+b1) ...
Setting up sbuild-build-depends-libhmsbeagle-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.28-6+rpi1) ...
Processing triggers for libgdk-pixbuf2.0-0:armhf (2.38.0+dfsg-7) ...
Processing triggers for ca-certificates (20190110) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
done.
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.6-armmp armhf (armv7l)
Toolchain package versions: binutils_2.31.1-11+rpi1 dpkg-dev_1.19.2 g++-8_8.2.0-20+rpi1 gcc-8_8.2.0-20+rpi1 libc6-dev_2.28-6+rpi1 libstdc++-8-dev_8.2.0-20+rpi1 libstdc++6_8.2.0-20+rpi1 linux-libc-dev_4.18.20-2+rpi1
Package versions: adduser_3.118 adwaita-icon-theme_3.30.1-1 ant_1.10.5-2 apt_1.8.0~rc3 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1+rpi1 base-passwd_3.5.46 bash_5.0-2 binutils_2.31.1-11+rpi1 binutils-arm-linux-gnueabihf_2.31.1-11+rpi1 binutils-common_2.31.1-11+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.33.1-0.1 build-essential_12.5 bzip2_1.0.6-9 ca-certificates_20190110 ca-certificates-java_20190214 clinfo_2.2.18.04.06-1 coreutils_8.30-1 cpio_2.12+dfsg-6 cpp_4:8.2.0-2+rpi1 cpp-8_8.2.0-20+rpi1 dash_0.5.10.2-5 dbus_1.12.12-1 dbus-user-session_1.12.12-1 dconf-gsettings-backend_0.30.1-2 dconf-service_0.30.1-2 dctrl-tools_2.24-3 debconf_1.5.70 debhelper_12.1 debianutils_4.8.6.1 default-jdk_2:1.11-71+b1 default-jdk-headless_2:1.11-71+b1 default-jre_2:1.11-71+b1 default-jre-headless_2:1.11-71+b1 devscripts_2.19.3 dh-autoreconf_19 dh-exec_0.23.1 dh-linktree_0.6 dh-strip-nondeterminism_1.1.1-1 diffutils_1:3.6-1 dirmngr_2.2.12-1+rpi1 dmsetup_2:1.02.155-2 doxygen_1.8.13-10 dpkg_1.19.2 dpkg-dev_1.19.2 dwz_0.12-3 e2fslibs_1.44.5-1 e2fsprogs_1.44.5-1 e2fsprogs-l10n_1.44.5-1 fakeroot_1.23-1 fdisk_2.33.1-0.1 file_1:5.35-2 findutils_4.6.0+git+20190105-2 fontconfig_2.13.1-2 fontconfig-config_2.13.1-2 fonts-dejavu-core_2.37-1 g++_4:8.2.0-2+rpi1 g++-8_8.2.0-20+rpi1 gcc_4:8.2.0-2+rpi1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.4-2+rpi1+b19 gcc-5-base_5.5.0-8 gcc-8_8.2.0-20+rpi1 gcc-8-base_8.2.0-20+rpi1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 glib-networking_2.58.0-2 glib-networking-common_2.58.0-2 glib-networking-services_2.58.0-2 gnupg_2.2.12-1+rpi1 gnupg-agent_2.2.12-1+rpi1 gnupg-l10n_2.2.12-1+rpi1 gnupg-utils_2.2.12-1+rpi1 gpg_2.2.12-1+rpi1 gpg-agent_2.2.12-1+rpi1 gpg-wks-client_2.2.12-1+rpi1 gpg-wks-server_2.2.12-1+rpi1 gpgconf_2.2.12-1+rpi1 gpgsm_2.2.12-1+rpi1 gpgv_2.2.12-1+rpi1 graphviz_2.40.1-5+b2 grep_3.3-1 groff-base_1.22.4-2 gsettings-desktop-schemas_3.28.1-1 gtk-update-icon-cache_3.24.5-1 gzip_1.9-3 hicolor-icon-theme_0.17-2 hostname_3.21 inetutils-ping_2:1.9.4-5 init-system-helpers_1.56+nmu1 initramfs-tools_0.133 initramfs-tools-core_0.133 intltool-debian_0.35.0+20060710.5 java-common_0.71 javahelper_0.72.1 klibc-utils_2.0.6-1+rpi1 kmod_26-1 krb5-locales_1.17-1 libacl1_2.2.52-3 libapparmor1_2.13.2-7 libapt-pkg5.0_1.8.0~rc3 libarchive-zip-perl_1.64-1 libargon2-1_0~20171227-0.2 libasan5_8.2.0-20+rpi1 libasound2_1.1.8-1 libasound2-data_1.1.8-1 libassuan0_2.5.2-1 libatk-bridge2.0-0_2.30.0-4 libatk1.0-0_2.30.0-2 libatk1.0-data_2.30.0-2 libatomic1_8.2.0-20+rpi1 libatspi2.0-0_2.30.0-7 libattr1_1:2.4.47-2 libaudit-common_1:2.8.4-2 libaudit1_1:2.8.4-2+b1 libavahi-client3_0.7-4+b1 libavahi-common-data_0.7-4+b1 libavahi-common3_0.7-4+b1 libb-hooks-op-check-perl_0.22-1+b1 libbinutils_2.31.1-11+rpi1 libblkid1_2.33.1-0.1 libbsd0_0.9.1-1 libbz2-1.0_1.0.6-9 libc-bin_2.28-6+rpi1 libc-dev-bin_2.28-6+rpi1 libc6_2.28-6+rpi1 libc6-dev_2.28-6+rpi1 libcairo-gobject2_1.16.0-2 libcairo2_1.16.0-2 libcap-ng0_0.7.9-2 libcap2_1:2.25-2 libcc1-0_8.2.0-20+rpi1 libcdt5_2.40.1-5+b2 libcgraph6_2.40.1-5+b2 libclang1-6.0_1:6.0.1-10+rpi1 libclass-method-modifiers-perl_2.12-1 libcolord2_1.4.3-4 libcom-err2_1.44.5-1 libcroco3_0.6.12-3 libcryptsetup12_2:2.1.0-1 libcryptsetup4_2:1.7.5-1 libcups2_2.2.10-4 libdatrie1_0.2.12-2 libdb5.3_5.3.28+dfsg1-0.3 libdbus-1-3_1.12.12-1 libdconf1_0.30.1-2 libdebconfclient0_0.247 libdevel-callchecker-perl_0.008-1 libdevel-globaldestruction-perl_0.14-1 libdevmapper1.02.1_2:1.02.155-2 libdpkg-perl_1.19.2 libdrm-amdgpu1_2.4.97-1+rpi1 libdrm-common_2.4.97-1+rpi1 libdrm-etnaviv1_2.4.97-1+rpi1 libdrm-nouveau2_2.4.97-1+rpi1 libdrm-radeon1_2.4.97-1+rpi1 libdrm2_2.4.97-1+rpi1 libdynaloader-functions-perl_0.003-1 libedit2_3.1-20181209-1 libelf1_0.176-1 libencode-locale-perl_1.05-1 libepoxy0_1.5.3-0.1 libexpat1_2.2.6-1 libext2fs2_1.44.5-1 libfakeroot_1.23-1 libfdisk1_2.33.1-0.1 libffi6_3.2.1-9 libfile-homedir-perl_1.004-1 libfile-listing-perl_6.04-1 libfile-stripnondeterminism-perl_1.1.1-1 libfile-which-perl_1.23-1 libfontconfig1_2.13.1-2 libfreetype6_2.9.1-3 libfribidi0_1.0.5-3.1 libgcc-8-dev_8.2.0-20+rpi1 libgcc1_1:8.2.0-20+rpi1 libgcrypt20_1.8.4-5 libgd3_2.2.5-5.1 libgdbm-compat4_1.18.1-2 libgdbm3_1.8.3-14 libgdbm6_1.18.1-2 libgdk-pixbuf2.0-0_2.38.0+dfsg-7 libgdk-pixbuf2.0-common_2.38.0+dfsg-7 libgif7_5.1.4-3 libgl1_1.1.0-1 libgl1-mesa-dri_18.3.4-1 libgl1-mesa-glx_18.3.4-1 libglapi-mesa_18.3.4-1 libglib2.0-0_2.58.3-1 libglvnd0_1.1.0-1 libglx-mesa0_18.3.4-1 libglx0_1.1.0-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.6-2 libgomp1_8.2.0-20+rpi1 libgpg-error-l10n_1.35-1 libgpg-error0_1.35-1 libgraphite2-3_1.3.13-7 libgssapi-krb5-2_1.17-1 libgtk-3-0_3.24.5-1 libgtk-3-common_3.24.5-1 libgts-0.7-5_0.7.6+darcs121130-4 libgvc6_2.40.1-5+b2 libgvpr2_2.40.1-5+b2 libharfbuzz0b_2.3.1-1 libhogweed4_3.4.1-1 libhtml-parser-perl_3.72-3+b2 libhtml-tagset-perl_3.20-3 libhtml-tree-perl_5.07-2 libhttp-cookies-perl_6.04-1 libhttp-date-perl_6.02-1 libhttp-message-perl_6.18-1 libhttp-negotiate-perl_6.01-1 libice6_2:1.0.9-2 libicu63_63.1-6 libidn11_1.33-2.2 libidn2-0_2.0.5-1 libimport-into-perl_1.002005-1 libio-html-perl_1.001-1 libio-pty-perl_1:1.08-1.1+b4 libio-socket-ssl-perl_2.060-3 libip4tc0_1.8.2-3 libipc-run-perl_20180523.0-1 libisl19_0.20-2 libjbig0_2.1-3.1+b2 libjpeg62-turbo_1:1.5.2-2+b1 libjs-jquery_3.3.1~dfsg-1 libjson-c3_0.12.1+ds-2 libjson-glib-1.0-0_1.4.4-2 libjson-glib-1.0-common_1.4.4-2 libk5crypto3_1.17-1 libkeyutils1_1.6-2 libklibc_2.0.6-1+rpi1 libkmod2_26-1 libkrb5-3_1.17-1 libkrb5support0_1.17-1 libksba8_1.3.5-2 liblab-gamut1_2.40.1-5+b2 liblcms2-2_2.9-3 libldap-2.4-2_2.4.47+dfsg-3+rpi1 libldap-common_2.4.47+dfsg-3+rpi1 libllvm6.0_1:6.0.1-10+rpi1 libllvm7_1:7.0.1-6+rpi1 libltdl7_2.4.6-9 liblwp-mediatypes-perl_6.02-1 liblwp-protocol-https-perl_6.07-2 liblz4-1_1.8.3-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.35-2 libmagic1_1:5.35-2 libmodule-runtime-perl_0.016-1 libmoo-perl_2.003004-2 libmount1_2.33.1-0.1 libmpc3_1.1.0-1 libmpdec2_2.4.2-2 libmpfr6_4.0.2-1 libncurses5_6.1+20181013-2 libncurses6_6.1+20181013-2 libncursesw5_6.1+20181013-2 libncursesw6_6.1+20181013-2 libnet-http-perl_6.18-1 libnet-ssleay-perl_1.85-2+b1 libnettle6_3.4.1-1 libnpth0_1.6-1 libnspr4_2:4.20-1 libnss-systemd_240-5+rpi1 libnss3_2:3.42.1-1 libp11-kit0_0.23.14-2 libpam-modules_1.1.8-4 libpam-modules-bin_1.1.8-4 libpam-runtime_1.1.8-4 libpam-systemd_240-5+rpi1 libpam0g_1.1.8-4 libpango-1.0-0_1.42.4-6 libpangocairo-1.0-0_1.42.4-6 libpangoft2-1.0-0_1.42.4-6 libparams-classify-perl_0.015-1+b1 libpathplan4_2.40.1-5+b2 libpcre3_2:8.39-11+rpi1 libpcsclite1_1.8.24-1 libperl5.24_5.24.1-7 libperl5.28_5.28.1-4 libpipeline1_1.5.1-2 libpixman-1-0_0.36.0-1 libplymouth4_0.9.4-1 libpng16-16_1.6.36-5 libprocps7_2:3.3.15-2 libproxy1v5_0.4.15-5 libpsl5_0.20.2-2 libpython3-stdlib_3.7.2-1 libpython3.7-minimal_3.7.2-2 libpython3.7-stdlib_3.7.2-2 libreadline7_7.0-5 librest-0.7-0_0.8.1-1 librole-tiny-perl_2.000006-1 librsvg2-2_2.44.10-1+rpi1 librsvg2-common_2.44.10-1+rpi1 libsasl2-2_2.1.27+dfsg-1 libsasl2-modules-db_2.1.27+dfsg-1 libseccomp2_2.3.3-4 libselinux1_2.8-1+b1 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsensors-config_1:3.5.0-3 libsensors5_1:3.5.0-3 libsepol1_2.8-1 libsigsegv2_2.12-2 libsm6_2:1.2.3-1 libsmartcols1_2.33.1-0.1 libsoup-gnome2.4-1_2.64.2-2 libsoup2.4-1_2.64.2-2 libsqlite3-0_3.26.0+fossilbc891ac6b-2 libss2_1.44.5-1 libssl1.1_1.1.1a-1 libstdc++-8-dev_8.2.0-20+rpi1 libstdc++6_8.2.0-20+rpi1 libstrictures-perl_2.000005-1 libsub-exporter-progressive-perl_0.001013-1 libsub-quote-perl_2.005001-1 libsystemd0_240-5+rpi1 libtasn1-6_4.13-3 libthai-data_0.1.28-2 libthai0_0.1.28-2 libtiff5_4.0.10-4 libtimedate-perl_2.3000-2 libtinfo5_6.1+20181013-2 libtinfo6_6.1+20181013-2 libtool_2.4.6-9 libtry-tiny-perl_0.30-1 libubsan1_8.2.0-20+rpi1 libuchardet0_0.0.6-3 libudev1_240-5+rpi1 libunistring2_0.9.10-1 liburi-perl_1.76-1 libustr-1.0-1_1.0.4-6 libuuid1_2.33.1-0.1 libwayland-client0_1.16.0-1 libwayland-cursor0_1.16.0-1 libwayland-egl1_1.16.0-1 libwebp6_0.6.1-2 libwww-perl_6.36-1 libwww-robotrules-perl_6.02-1 libx11-6_2:1.6.7-1 libx11-data_2:1.6.7-1 libx11-xcb1_2:1.6.7-1 libxapian30_1.4.10-1 libxau6_1:1.0.8-1+b2 libxaw7_2:1.0.13-1 libxcb-dri2-0_1.13.1-2 libxcb-dri3-0_1.13.1-2 libxcb-glx0_1.13.1-2 libxcb-present0_1.13.1-2 libxcb-render0_1.13.1-2 libxcb-shm0_1.13.1-2 libxcb-sync1_1.13.1-2 libxcb1_1.13.1-2 libxcomposite1_1:0.4.4-2 libxcursor1_1:1.1.15-2 libxdamage1_1:1.1.4-3 libxdmcp6_1:1.1.2-3 libxdot4_2.40.1-5+b2 libxext6_2:1.3.3-1+b2 libxfixes3_1:5.0.3-1 libxi6_2:1.7.9-1 libxinerama1_2:1.1.4-2 libxkbcommon0_0.8.2-1 libxml2_2.9.4+dfsg1-7+b1 libxmu6_2:1.1.2-2 libxpm4_1:3.5.12-1 libxrandr2_2:1.5.1-1 libxrender1_1:0.9.10-1 libxshmfence1_1.3-1 libxt6_1:1.1.5-1 libxtst6_2:1.2.3-1 libxxf86vm1_1:1.1.4-1+b2 libzstd1_1.3.8+dfsg-3+rpi1 linux-base_4.5 linux-libc-dev_4.18.20-2+rpi1 login_1:4.5-1.1 lsb-base_10.2018112800+rpi1 m4_1.4.18-2 make_4.2.1-1.2 makedev_2.3.1-94 man-db_2.8.5-2 mawk_1.3.3-17 mime-support_3.62 mount_2.33.1-0.1 multiarch-support_2.28-6+rpi1 nano_3.2-1 ncurses-base_6.1+20181013-2 ncurses-bin_6.1+20181013-2 netbase_5.6 ocl-icd-libopencl1_2.2.12-2 ocl-icd-opencl-dev_2.2.12-2 opencl-c-headers_2.2~2019.01.17-g49f07d3-1 openjdk-11-jdk_11.0.2+9-3 openjdk-11-jdk-headless_11.0.2+9-3 openjdk-11-jre_11.0.2+9-3 openjdk-11-jre-headless_11.0.2+9-3 openssl_1.1.1a-1 passwd_1:4.5-1.1 patch_2.7.6-3 patchutils_0.3.4-2 perl_5.28.1-4 perl-base_5.28.1-4 perl-modules-5.24_5.24.1-7 perl-modules-5.28_5.28.1-4 perl-openssl-defaults_3 pinentry-curses_1.1.0-1 plymouth_0.9.4-1 po-debconf_1.0.21 procps_2:3.3.15-2 python3_3.7.2-1 python3-minimal_3.7.2-1 python3.7_3.7.2-2 python3.7-minimal_3.7.2-2 raspbian-archive-keyring_20120528.2 readline-common_7.0-5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-libhmsbeagle-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 shared-mime-info_1.10-1 systemd_240-5+rpi1 systemd-sysv_240-5+rpi1 sysvinit-utils_2.93-6 tar_1.30+dfsg-5 tzdata_2018i-1 ucf_3.0038+nmu1 udev_240-5+rpi1 util-linux_2.33.1-0.1 wdiff_1.2.2-2 x11-common_1:7.7+19 xkb-data_2.26-2 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Fri Feb 22 14:40:18 2019 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./libhmsbeagle_3.1.2+dfsg-5.dsc
dpkg-source: info: extracting libhmsbeagle in /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg
dpkg-source: info: unpacking libhmsbeagle_3.1.2+dfsg.orig.tar.xz
dpkg-source: info: unpacking libhmsbeagle_3.1.2+dfsg-5.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying enable_static.patch
dpkg-source: info: applying gcc-4.7.patch
dpkg-source: info: applying doxygen_update.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-6ccf643e-b94f-4951-98fe-751c75a5df4d
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package libhmsbeagle
dpkg-buildpackage: info: source version 3.1.2+dfsg-5
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
LC_ALL=C.UTF-8 dh clean --with javahelper
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg'
/usr/bin/make -f Makefile distclean || true
make[2]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg'
make[2]: Makefile: No such file or directory
make[2]: *** No rule to make target 'Makefile'. Stop.
make[2]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg'
rm -rf doc .config configure
rm -rf lib build
make[1]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg'
jh_clean
rm -fr debian/.eclipse-build
rm -f debian/orbitdeps.debhelper
dh_clean
rm -f debian/debhelper-build-stamp
rm -rf debian/.debhelper/
rm -f -- debian/libhmsbeagle-dev.substvars debian/libhmsbeagle1v5.substvars debian/libhmsbeagle-java.substvars debian/files
rm -fr -- debian/libhmsbeagle-dev/ debian/tmp/ debian/libhmsbeagle1v5/ debian/libhmsbeagle-java/
find . \( \( \
\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \
\( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
-o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
-o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
-o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
\) -exec rm -f {} + \) -o \
\( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \)
debian/rules build-arch
LC_ALL=C.UTF-8 dh build-arch --with javahelper
dh_update_autotools_config -a
dh_autoreconf -a
find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p
" > debian/autoreconf.before
grep -q ^XDT_ configure.ac
autoreconf -f -i
libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, '.config'.
libtoolize: copying file '.config/ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
configure.ac:57: installing '.config/compile'
configure.ac:63: installing '.config/config.guess'
configure.ac:63: installing '.config/config.sub'
configure.ac:55: installing '.config/install-sh'
configure.ac:55: installing '.config/missing'
Makefile.am: installing './INSTALL'
examples/complextest/Makefile.am: installing '.config/depcomp'
parallel-tests: installing '.config/test-driver'
find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p
" > debian/autoreconf.after
debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg'
./autogen.sh
libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, '.config'.
libtoolize: copying file '.config/ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
configure.ac:57: installing '.config/compile'
configure.ac:55: installing '.config/missing'
examples/complextest/Makefile.am: installing '.config/depcomp'
dh_auto_configure -- --enable-doxygen-man --enable-march-native=no --enable-sse=no --with-opencl=/usr/include/CL
./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --enable-doxygen-man --enable-march-native=no --enable-sse=no --with-opencl=/usr/include/CL
configure: WARNING: unrecognized options: --disable-maintainer-mode
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking whether make supports the include directive... yes (GNU style)
checking dependency style of gcc... none
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking dependency style of g++... none
checking whether ln -s works... yes
checking build system type... arm-unknown-linux-gnueabihf
checking host system type... arm-unknown-linux-gnueabihf
checking how to print strings... printf
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking the maximum length of command line arguments... 1572864
checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop
checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... mt
checking if mt is a manifest tool... no
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking how to run the C++ preprocessor... g++ -E
checking for ld used by g++... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking for g++ option to produce PIC... -fPIC -DPIC
checking if g++ PIC flag -fPIC -DPIC works... yes
checking if g++ static flag -static works... yes
checking if g++ supports -c -o file.o... yes
checking if g++ supports -c -o file.o... (cached) yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for library containing dlopen... -ldl
checking for C compiler vendor... gnu
checking for C compiler version... 8.2.0
checking for /usr/local/cuda/... no
checking for /usr/local/cuda/include... no
checking for /usr/local/cuda/lib... no
checking if javac works... yes
checking for javac... /usr/bin/javac
checking symlink for /usr/bin/javac... /etc/alternatives/javac
checking symlink for /etc/alternatives/javac... /usr/lib/jvm/java-11-openjdk-armhf/bin/javac
checking for /usr/lib/jvm/java-11-openjdk-armhf/bin/include/jni.h... no
checking for /usr/lib/jvm/java-11-openjdk-armhf/include/jni.h... yes
checking for doxygen... /usr/bin/doxygen
checking for perl... /usr/bin/perl
checking for dot... /usr/bin/dot
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating hmsbeagle-1.pc
config.status: creating libhmsbeagle/Makefile
config.status: creating libhmsbeagle/GPU/Makefile
config.status: creating libhmsbeagle/GPU/kernels/Makefile
config.status: creating libhmsbeagle/CPU/Makefile
config.status: creating libhmsbeagle/plugin/Makefile
config.status: creating libhmsbeagle/benchmark/Makefile
config.status: creating libhmsbeagle/JNI/Makefile
config.status: creating examples/Makefile
config.status: creating examples/tinytest/Makefile
config.status: creating examples/complextest/Makefile
config.status: creating examples/oddstatetest/Makefile
config.status: creating examples/fourtaxon/Makefile
config.status: creating examples/synthetictest/Makefile
config.status: creating examples/matrixtest/Makefile
config.status: creating libhmsbeagle/config.h
config.status: executing depfiles commands
config.status: executing libtool commands
configure: WARNING: unrecognized options: --disable-maintainer-mode
configure: WARNING: NVIDIA CUDA nvcc compiler not found or CUDA support disabled. CUDA implementation will not be built. If CUDA support is desired, check the path to CUDA and specify --with-cuda=/path/to/cuda
make[1]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg'
jh_linkjars -a
rm -f debian/libhmsbeagle-dev.debhelper.log debian/libhmsbeagle-java.debhelper.log debian/libhmsbeagle1v5.debhelper.log
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg'
/usr/bin/make
make[2]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg'
Making all in libhmsbeagle
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle'
/usr/bin/make all-recursive
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle'
Making all in GPU
make[5]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU'
Making all in kernels
make[6]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU/kernels'
echo "// auto-generated header file with OpenCL kernels code" > BeagleOpenCL_kernels.h
echo "#define KERNELS_STRING_SP_4 \"" | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h
echo "#define STATE_COUNT 4" | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h
cat ./../GPUImplDefs.h | sed 's/\\/\\\\/g' | sed 's/\"/\\"/g' | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h
cat ./kernelsAll.cu | sed 's/\\/\\\\/g' | sed 's/\"/\\"/g' | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h
cat ./kernels4.cu | sed 's/\\/\\\\/g' | sed 's/\"/\\"/g' | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h
echo "\"" >> BeagleOpenCL_kernels.h
for s in 16 32 48 64 80 128 192; do \
echo "Making state count = $s" ; \
echo "#define KERNELS_STRING_SP_$s \"" | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h; \
echo "#define STATE_COUNT $s" | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h; \
cat ./../GPUImplDefs.h | sed 's/\\/\\\\/g' | sed 's/\"/\\"/g' | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h; \
cat ./kernelsAll.cu | sed 's/\\/\\\\/g' | sed 's/\"/\\"/g' | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h; \
cat ./kernelsX.cu | sed 's/\\/\\\\/g' | sed 's/\"/\\"/g' | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h; \
echo "\"" >> BeagleOpenCL_kernels.h; \
done
Making state count = 16
Making state count = 32
Making state count = 48
Making state count = 64
Making state count = 80
Making state count = 128
Making state count = 192
echo "#define KERNELS_STRING_DP_4 \"" | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h
echo "#define STATE_COUNT 4" | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h
echo "#define DOUBLE_PRECISION" | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h
cat ./../GPUImplDefs.h | sed 's/\\/\\\\/g' | sed 's/\"/\\"/g' | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h
cat ./kernelsAll.cu | sed 's/\\/\\\\/g' | sed 's/\"/\\"/g' | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h
cat ./kernels4.cu | sed 's/\\/\\\\/g' | sed 's/\"/\\"/g' | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h
echo "\"" >> BeagleOpenCL_kernels.h
for s in 16 32 48 64 80 128 192; do \
echo "Making state count = $s DP"; \
echo "#define KERNELS_STRING_DP_$s \"" | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h; \
echo "#define STATE_COUNT $s" | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h; \
echo "#define DOUBLE_PRECISION" | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h; \
cat ./../GPUImplDefs.h | sed 's/\\/\\\\/g' | sed 's/\"/\\"/g' | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h; \
cat ./kernelsAll.cu | sed 's/\\/\\\\/g' | sed 's/\"/\\"/g' | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h; \
cat ./kernelsX.cu | sed 's/\\/\\\\/g' | sed 's/\"/\\"/g' | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h; \
echo "\"" >> BeagleOpenCL_kernels.h; \
done
Making state count = 16 DP
Making state count = 32 DP
Making state count = 48 DP
Making state count = 64 DP
Making state count = 80 DP
Making state count = 128 DP
Making state count = 192 DP
/usr/bin/make all-am
make[7]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU/kernels'
make[7]: Nothing to be done for 'all-am'.
make[7]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU/kernels'
make[6]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU/kernels'
make[6]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU'
/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_opencl_la-GPUImplHelper.lo `test -f 'GPUImplHelper.cpp' || echo './'`GPUImplHelper.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c GPUImplHelper.cpp -fPIC -DPIC -o .libs/libhmsbeagle_opencl_la-GPUImplHelper.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c GPUImplHelper.cpp -o libhmsbeagle_opencl_la-GPUImplHelper.o >/dev/null 2>&1
/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_opencl_la-GPUInterfaceOpenCL.lo `test -f 'GPUInterfaceOpenCL.cpp' || echo './'`GPUInterfaceOpenCL.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c GPUInterfaceOpenCL.cpp -fPIC -DPIC -o .libs/libhmsbeagle_opencl_la-GPUInterfaceOpenCL.o
In file included from /usr/include/CL/cl.h:32,
from /usr/include/CL/opencl.h:38,
from /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU/GPUInterface.h:60,
from GPUInterfaceOpenCL.cpp:39:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
#pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
^
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c GPUInterfaceOpenCL.cpp -o libhmsbeagle_opencl_la-GPUInterfaceOpenCL.o >/dev/null 2>&1
/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_opencl_la-KernelLauncher.lo `test -f 'KernelLauncher.cpp' || echo './'`KernelLauncher.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c KernelLauncher.cpp -fPIC -DPIC -o .libs/libhmsbeagle_opencl_la-KernelLauncher.o
In file included from /usr/include/CL/cl.h:32,
from /usr/include/CL/opencl.h:38,
from /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU/GPUInterface.h:60,
from /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU/KernelLauncher.h:35,
from KernelLauncher.cpp:36:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
#pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
^
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c KernelLauncher.cpp -o libhmsbeagle_opencl_la-KernelLauncher.o >/dev/null 2>&1
/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_opencl_la-KernelResource.lo `test -f 'KernelResource.cpp' || echo './'`KernelResource.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c KernelResource.cpp -fPIC -DPIC -o .libs/libhmsbeagle_opencl_la-KernelResource.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c KernelResource.cpp -o libhmsbeagle_opencl_la-KernelResource.o >/dev/null 2>&1
/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_opencl_la-OpenCLPlugin.lo `test -f 'OpenCLPlugin.cpp' || echo './'`OpenCLPlugin.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c OpenCLPlugin.cpp -fPIC -DPIC -o .libs/libhmsbeagle_opencl_la-OpenCLPlugin.o
In file included from /usr/include/CL/cl.h:32,
from /usr/include/CL/opencl.h:38,
from /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU/GPUInterface.h:60,
from /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU/BeagleGPUImpl.h:39,
from OpenCLPlugin.cpp:8:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
#pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
^
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c OpenCLPlugin.cpp -o libhmsbeagle_opencl_la-OpenCLPlugin.o >/dev/null 2>&1
/bin/bash ../../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -module -version-number 31 -Wl,-z,relro -Wl,-z,now -o libhmsbeagle-opencl.la -rpath /usr/lib/arm-linux-gnueabihf libhmsbeagle_opencl_la-GPUImplHelper.lo libhmsbeagle_opencl_la-GPUInterfaceOpenCL.lo libhmsbeagle_opencl_la-KernelLauncher.lo libhmsbeagle_opencl_la-KernelResource.lo libhmsbeagle_opencl_la-OpenCLPlugin.lo -lOpenCL -ldl
libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/8/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/8/crtbeginS.o .libs/libhmsbeagle_opencl_la-GPUImplHelper.o .libs/libhmsbeagle_opencl_la-GPUInterfaceOpenCL.o .libs/libhmsbeagle_opencl_la-KernelLauncher.o .libs/libhmsbeagle_opencl_la-KernelResource.o .libs/libhmsbeagle_opencl_la-OpenCLPlugin.o -lOpenCL -ldl -L/usr/lib/gcc/arm-linux-gnueabihf/8 -L/usr/lib/gcc/arm-linux-gnueabihf/8/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/8/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/8/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/8/../../../arm-linux-gnueabihf/crtn.o -O3 -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libhmsbeagle-opencl.so.31 -o .libs/libhmsbeagle-opencl.so.31.0.0
libtool: link: (cd ".libs" && rm -f "libhmsbeagle-opencl.so.31" && ln -s "libhmsbeagle-opencl.so.31.0.0" "libhmsbeagle-opencl.so.31")
libtool: link: (cd ".libs" && rm -f "libhmsbeagle-opencl.so" && ln -s "libhmsbeagle-opencl.so.31.0.0" "libhmsbeagle-opencl.so")
libtool: link: ar cru .libs/libhmsbeagle-opencl.a libhmsbeagle_opencl_la-GPUImplHelper.o libhmsbeagle_opencl_la-GPUInterfaceOpenCL.o libhmsbeagle_opencl_la-KernelLauncher.o libhmsbeagle_opencl_la-KernelResource.o libhmsbeagle_opencl_la-OpenCLPlugin.o
ar: `u' modifier ignored since `D' is the default (see `U')
libtool: link: ranlib .libs/libhmsbeagle-opencl.a
libtool: link: ( cd ".libs" && rm -f "libhmsbeagle-opencl.la" && ln -s "../libhmsbeagle-opencl.la" "libhmsbeagle-opencl.la" )
make[6]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU'
make[5]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU'
Making all in CPU
make[5]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/CPU'
/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_cpu_la-BeagleCPUPlugin.lo `test -f 'BeagleCPUPlugin.cpp' || echo './'`BeagleCPUPlugin.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c BeagleCPUPlugin.cpp -fPIC -DPIC -o .libs/libhmsbeagle_cpu_la-BeagleCPUPlugin.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -I/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c BeagleCPUPlugin.cpp -o libhmsbeagle_cpu_la-BeagleCPUPlugin.o >/dev/null 2>&1
/bin/bash ../../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -pthread -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -module -version-number 31 -Wl,-z,relro -Wl,-z,now -o libhmsbeagle-cpu.la -rpath /usr/lib/arm-linux-gnueabihf libhmsbeagle_cpu_la-BeagleCPUPlugin.lo -lpthread -ldl
libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/8/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/8/crtbeginS.o .libs/libhmsbeagle_cpu_la-BeagleCPUPlugin.o -lpthread -ldl -L/usr/lib/gcc/arm-linux-gnueabihf/8 -L/usr/lib/gcc/arm-linux-gnueabihf/8/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/8/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/8/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/8/../../../arm-linux-gnueabihf/crtn.o -O3 -pthread -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -pthread -Wl,-soname -Wl,libhmsbeagle-cpu.so.31 -o .libs/libhmsbeagle-cpu.so.31.0.0
libtool: link: (cd ".libs" && rm -f "libhmsbeagle-cpu.so.31" && ln -s "libhmsbeagle-cpu.so.31.0.0" "libhmsbeagle-cpu.so.31")
libtool: link: (cd ".libs" && rm -f "libhmsbeagle-cpu.so" && ln -s "libhmsbeagle-cpu.so.31.0.0" "libhmsbeagle-cpu.so")
libtool: link: ar cru .libs/libhmsbeagle-cpu.a libhmsbeagle_cpu_la-BeagleCPUPlugin.o
ar: `u' modifier ignored since `D' is the default (see `U')
libtool: link: ranlib .libs/libhmsbeagle-cpu.a
libtool: link: ( cd ".libs" && rm -f "libhmsbeagle-cpu.la" && ln -s "../libhmsbeagle-cpu.la" "libhmsbeagle-cpu.la" )
make[5]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/CPU'
Making all in plugin
make[5]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/plugin'
/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libplugin_la-Plugin.lo `test -f 'Plugin.cpp' || echo './'`Plugin.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c Plugin.cpp -fPIC -DPIC -o .libs/libplugin_la-Plugin.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c Plugin.cpp -o libplugin_la-Plugin.o >/dev/null 2>&1
/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libplugin_la-UnixSharedLibrary.lo `test -f 'UnixSharedLibrary.cpp' || echo './'`UnixSharedLibrary.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c UnixSharedLibrary.cpp -fPIC -DPIC -o .libs/libplugin_la-UnixSharedLibrary.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c UnixSharedLibrary.cpp -o libplugin_la-UnixSharedLibrary.o >/dev/null 2>&1
/bin/bash ../../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o libplugin.la libplugin_la-Plugin.lo libplugin_la-UnixSharedLibrary.lo -ldl
libtool: link: ar cru .libs/libplugin.a .libs/libplugin_la-Plugin.o .libs/libplugin_la-UnixSharedLibrary.o
ar: `u' modifier ignored since `D' is the default (see `U')
libtool: link: ranlib .libs/libplugin.a
libtool: link: ( cd ".libs" && rm -f "libplugin.la" && ln -s "../libplugin.la" "libplugin.la" )
make[5]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/plugin'
Making all in benchmark
make[5]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/benchmark'
/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libbenchmark_la-BeagleBenchmark.lo `test -f 'BeagleBenchmark.cpp' || echo './'`BeagleBenchmark.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c BeagleBenchmark.cpp -fPIC -DPIC -o .libs/libbenchmark_la-BeagleBenchmark.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c BeagleBenchmark.cpp -o libbenchmark_la-BeagleBenchmark.o >/dev/null 2>&1
/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libbenchmark_la-linalg.lo `test -f 'linalg.cpp' || echo './'`linalg.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c linalg.cpp -fPIC -DPIC -o .libs/libbenchmark_la-linalg.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c linalg.cpp -o libbenchmark_la-linalg.o >/dev/null 2>&1
/bin/bash ../../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o libbenchmark.la libbenchmark_la-BeagleBenchmark.lo libbenchmark_la-linalg.lo -ldl
libtool: link: ar cru .libs/libbenchmark.a .libs/libbenchmark_la-BeagleBenchmark.o .libs/libbenchmark_la-linalg.o
ar: `u' modifier ignored since `D' is the default (see `U')
libtool: link: ranlib .libs/libbenchmark.a
libtool: link: ( cd ".libs" && rm -f "libbenchmark.la" && ln -s "../libbenchmark.la" "libbenchmark.la" )
make[5]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/benchmark'
make[5]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle'
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_la-beagle.lo `test -f 'beagle.cpp' || echo './'`beagle.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c beagle.cpp -fPIC -DPIC -o .libs/libhmsbeagle_la-beagle.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c beagle.cpp -o libhmsbeagle_la-beagle.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 4:2:3 -Wl,-z,relro -Wl,-z,now -o libhmsbeagle.la -rpath /usr/lib/arm-linux-gnueabihf libhmsbeagle_la-beagle.lo plugin/libplugin.la benchmark/libbenchmark.la -lpthread -ldl
libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/8/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/8/crtbeginS.o .libs/libhmsbeagle_la-beagle.o -Wl,--whole-archive plugin/.libs/libplugin.a benchmark/.libs/libbenchmark.a -Wl,--no-whole-archive -lpthread -ldl -L/usr/lib/gcc/arm-linux-gnueabihf/8 -L/usr/lib/gcc/arm-linux-gnueabihf/8/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/8/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/8/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/8/../../../arm-linux-gnueabihf/crtn.o -O3 -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libhmsbeagle.so.1 -o .libs/libhmsbeagle.so.1.3.2
libtool: link: (cd ".libs" && rm -f "libhmsbeagle.so.1" && ln -s "libhmsbeagle.so.1.3.2" "libhmsbeagle.so.1")
libtool: link: (cd ".libs" && rm -f "libhmsbeagle.so" && ln -s "libhmsbeagle.so.1.3.2" "libhmsbeagle.so")
libtool: link: (cd .libs/libhmsbeagle.lax/libplugin.a && ar x "/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/plugin/.libs/libplugin.a")
libtool: link: (cd .libs/libhmsbeagle.lax/libbenchmark.a && ar x "/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/benchmark/.libs/libbenchmark.a")
libtool: link: ar cru .libs/libhmsbeagle.a libhmsbeagle_la-beagle.o .libs/libhmsbeagle.lax/libplugin.a/libplugin_la-Plugin.o .libs/libhmsbeagle.lax/libplugin.a/libplugin_la-UnixSharedLibrary.o .libs/libhmsbeagle.lax/libbenchmark.a/libbenchmark_la-BeagleBenchmark.o .libs/libhmsbeagle.lax/libbenchmark.a/libbenchmark_la-linalg.o
ar: `u' modifier ignored since `D' is the default (see `U')
libtool: link: ranlib .libs/libhmsbeagle.a
libtool: link: rm -fr .libs/libhmsbeagle.lax
libtool: link: ( cd ".libs" && rm -f "libhmsbeagle.la" && ln -s "../libhmsbeagle.la" "libhmsbeagle.la" )
make[5]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle'
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle'
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle'
Making all in libhmsbeagle/JNI
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/JNI'
/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.lo `test -f 'beagle_BeagleJNIWrapper.cpp' || echo './'`beagle_BeagleJNIWrapper.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c beagle_BeagleJNIWrapper.cpp -fPIC -DPIC -o .libs/libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-11-openjdk-armhf/include -I/usr/lib/jvm/java-11-openjdk-armhf/include/linux -O3 -std=c++11 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c beagle_BeagleJNIWrapper.cpp -o libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.o >/dev/null 2>&1
/bin/bash ../../libtool --tag=CXX --mode=link g++ -O3 -std=c++11 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -module -avoid-version -Wl,-z,relro -Wl,-z,now -o libhmsbeagle-jni.la -rpath /usr/lib/arm-linux-gnueabihf libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.lo -L../../libhmsbeagle -lhmsbeagle -ldl
libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/8/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/8/crtbeginS.o .libs/libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.o -Wl,-rpath -Wl,/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/.libs -L../../libhmsbeagle /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/.libs/libhmsbeagle.so -ldl -L/usr/lib/gcc/arm-linux-gnueabihf/8 -L/usr/lib/gcc/arm-linux-gnueabihf/8/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/8/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/8/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/8/../../../arm-linux-gnueabihf/crtn.o -O3 -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libhmsbeagle-jni.so -o .libs/libhmsbeagle-jni.so
libtool: link: ar cru .libs/libhmsbeagle-jni.a libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.o
ar: `u' modifier ignored since `D' is the default (see `U')
libtool: link: ranlib .libs/libhmsbeagle-jni.a
libtool: link: ( cd ".libs" && rm -f "libhmsbeagle-jni.la" && ln -s "../libhmsbeagle-jni.la" "libhmsbeagle-jni.la" )
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/JNI'
Making all in examples
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples'
Making all in synthetictest
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/synthetictest'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/synthetictest'
Making all in tinytest
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/tinytest'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/tinytest'
Making all in oddstatetest
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/oddstatetest'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/oddstatetest'
Making all in complextest
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/complextest'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/complextest'
Making all in fourtaxon
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/fourtaxon'
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Making all in matrixtest
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/matrixtest'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/matrixtest'
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples'
make[4]: Nothing to be done for 'all-am'.
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make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples'
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg'
make[3]: Nothing to be done for 'all-am'.
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg'
make[2]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg'
/usr/bin/make doxygen-doc
make[2]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg'
rm -rf doc
SRCDIR='.' PROJECT='libhmsbeagle' DOCDIR='doc' VERSION='3.1.2' PERL_PATH='/usr/bin/perl' HAVE_DOT='YES' DOT_PATH='/usr/bin' GENERATE_MAN='YES' GENERATE_RTF='NO' GENERATE_XML='NO' GENERATE_HTMLHELP='NO' GENERATE_CHI='NO' GENERATE_HTML='YES' GENERATE_LATEX='NO' /usr/bin/doxygen ./beagle.dox
warning: Tag `XML_SCHEMA' at line 1786 of file `./beagle.dox' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag `XML_DTD' at line 1792 of file `./beagle.dox' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/beagle.h:636: warning: argument 'inPartitionPatternWeights' of command @param is not found in the argument list of beagleConvolveTransitionMatrices(int instance, const int *firstIndices, const int *secondIndices, const int *resultIndices, int matrixCount)
/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/beagle.h:636: warning: argument 'partitionCount' of command @param is not found in the argument list of beagleConvolveTransitionMatrices(int instance, const int *firstIndices, const int *secondIndices, const int *resultIndices, int matrixCount)
Notice: Output directory `doc' does not exist. I have created it for you.
Searching for include files...
Searching for example files...
Searching for images...
Searching for dot files...
Searching for msc files...
Searching for dia files...
Searching for files to exclude
Searching INPUT for files to process...
Searching for files in directory /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle
Reading and parsing tag files
Parsing files
Preprocessing /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/beagle.h...
Parsing file /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/beagle.h...
Building group list...
Building directory list...
Building namespace list...
Building file list...
Building class list...
Associating documentation with classes...
Computing nesting relations for classes...
Building example list...
Searching for enumerations...
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Searching for members imported via using declarations...
Searching for included using directives...
Searching for documented variables...
Building interface member list...
Building member list...
Searching for friends...
Searching for documented defines...
Computing class inheritance relations...
Computing class usage relations...
Flushing cached template relations that have become invalid...
Computing class relations...
Add enum values to enums...
Searching for member function documentation...
Creating members for template instances...
Building page list...
Search for main page...
Computing page relations...
Determining the scope of groups...
Sorting lists...
Freeing entry tree
Determining which enums are documented
Computing member relations...
Building full member lists recursively...
Adding members to member groups.
Computing member references...
Inheriting documentation...
Generating disk names...
Adding source references...
Adding xrefitems...
Sorting member lists...
Computing dependencies between directories...
Generating citations page...
Counting data structures...
Resolving user defined references...
Finding anchors and sections in the documentation...
Transferring function references...
Combining using relations...
Adding members to index pages...
Generating style sheet...
Generating search indices...
Generating example documentation...
Generating file sources...
Generating code for file libhmsbeagle/beagle.h...
Generating file documentation...
Generating docs for file libhmsbeagle/beagle.h...
Generating page documentation...
Generating group documentation...
Generating class documentation...
Generating docs for compound BeagleBenchmarkedResource...
Generating docs for compound BeagleBenchmarkedResourceList...
Generating docs for compound BeagleInstanceDetails...
Generating docs for compound BeagleOperation...
Generating docs for compound BeagleOperationByPartition...
Generating docs for compound BeagleResource...
Generating docs for compound BeagleResourceList...
Generating namespace index...
Generating graph info page...
Generating directory documentation...
Generating index page...
Generating page index...
Generating module index...
Generating namespace index...
Generating namespace member index...
Generating annotated compound index...
Generating alphabetical compound index...
Generating hierarchical class index...
Generating graphical class hierarchy...
Generating member index...
Generating file index...
Generating file member index...
Generating example index...
finalizing index lists...
writing tag file...
Running dot...
Generating dot graphs using 5 parallel threads...
Running dot for graph 1/4
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Patching output file 3/3
lookup cache used 156/65536 hits=235 misses=157
finished...
make[2]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg'
ant
Buildfile: /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/build.xml
init:
[mkdir] Created dir: /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/build
[mkdir] Created dir: /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/lib
compile:
[javac] /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/build.xml:37: warning: 'includeantruntime' was not set, defaulting to build.sysclasspath=last; set to false for repeatable builds
[javac] Compiling 14 source files to /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/build
[javac] warning: [options] bootstrap class path not set in conjunction with -source 6
[javac] warning: [options] source value 6 is obsolete and will be removed in a future release
[javac] warning: [options] target value 1.6 is obsolete and will be removed in a future release
[javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
[javac] Note: Some input files use or override a deprecated API.
[javac] Note: Recompile with -Xlint:deprecation for details.
[javac] 4 warnings
dist:
[jar] Building jar: /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/lib/beagle.jar
BUILD SUCCESSFUL
Total time: 18 seconds
make[1]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg'
jh_build -a
debian/rules override_dh_auto_test
make[1]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg'
No OpenCL platform available, skipping test
make[1]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg'
create-stamp debian/debhelper-build-stamp
fakeroot debian/rules binary-arch
LC_ALL=C.UTF-8 dh binary-arch --with javahelper
dh_testroot -a
dh_prep -a
rm -f -- debian/libhmsbeagle-dev.substvars debian/libhmsbeagle1v5.substvars debian/libhmsbeagle-java.substvars
rm -fr -- debian/.debhelper/generated/libhmsbeagle-dev/ debian/libhmsbeagle-dev/ debian/tmp/ debian/.debhelper/generated/libhmsbeagle1v5/ debian/libhmsbeagle1v5/ debian/.debhelper/generated/libhmsbeagle-java/ debian/libhmsbeagle-java/
dh_installdirs -a
install -d debian/libhmsbeagle-dev/usr/lib debian/libhmsbeagle-dev/usr/include
install -d debian/libhmsbeagle1v5/usr/lib
dh_auto_install -a
install -d /<<BUILDDIR>>/libhmsbeagle-3.1.2\+dfsg/debian/tmp
make -j1 install DESTDIR=/<<BUILDDIR>>/libhmsbeagle-3.1.2\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no
make[1]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg'
Making install in libhmsbeagle
make[2]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle'
Making install in GPU
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU'
Making install in kernels
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU/kernels'
make install-am
make[5]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU/kernels'
make[6]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU/kernels'
make[6]: Nothing to be done for 'install-exec-am'.
make[6]: Nothing to be done for 'install-data-am'.
make[6]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU/kernels'
make[5]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU/kernels'
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU/kernels'
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU'
make[5]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU'
/bin/mkdir -p '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf'
/bin/bash ../../libtool --mode=install /usr/bin/install -c libhmsbeagle-opencl.la '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/libhmsbeagle-opencl.so.31.0.0 /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so.31.0.0
libtool: install: (cd /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libhmsbeagle-opencl.so.31.0.0 libhmsbeagle-opencl.so.31 || { rm -f libhmsbeagle-opencl.so.31 && ln -s libhmsbeagle-opencl.so.31.0.0 libhmsbeagle-opencl.so.31; }; })
libtool: install: (cd /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libhmsbeagle-opencl.so.31.0.0 libhmsbeagle-opencl.so || { rm -f libhmsbeagle-opencl.so && ln -s libhmsbeagle-opencl.so.31.0.0 libhmsbeagle-opencl.so; }; })
libtool: install: /usr/bin/install -c .libs/libhmsbeagle-opencl.lai /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.la
libtool: install: /usr/bin/install -c .libs/libhmsbeagle-opencl.a /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.a
libtool: install: chmod 644 /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.a
libtool: install: ranlib /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.a
libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf'
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU'
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU'
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/GPU'
Making install in CPU
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/CPU'
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/CPU'
/bin/mkdir -p '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf'
/bin/bash ../../libtool --mode=install /usr/bin/install -c libhmsbeagle-cpu.la '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/libhmsbeagle-cpu.so.31.0.0 /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so.31.0.0
libtool: install: (cd /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libhmsbeagle-cpu.so.31.0.0 libhmsbeagle-cpu.so.31 || { rm -f libhmsbeagle-cpu.so.31 && ln -s libhmsbeagle-cpu.so.31.0.0 libhmsbeagle-cpu.so.31; }; })
libtool: install: (cd /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libhmsbeagle-cpu.so.31.0.0 libhmsbeagle-cpu.so || { rm -f libhmsbeagle-cpu.so && ln -s libhmsbeagle-cpu.so.31.0.0 libhmsbeagle-cpu.so; }; })
libtool: install: /usr/bin/install -c .libs/libhmsbeagle-cpu.lai /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.la
libtool: install: /usr/bin/install -c .libs/libhmsbeagle-cpu.a /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.a
libtool: install: chmod 644 /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.a
libtool: install: ranlib /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.a
libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf'
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/CPU'
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/CPU'
Making install in plugin
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/plugin'
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/plugin'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/plugin'
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/plugin'
Making install in benchmark
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/benchmark'
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/benchmark'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/benchmark'
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/benchmark'
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle'
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle'
/bin/mkdir -p '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf'
/bin/bash ../libtool --mode=install /usr/bin/install -c libhmsbeagle.la '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/libhmsbeagle.so.1.3.2 /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so.1.3.2
libtool: install: (cd /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libhmsbeagle.so.1.3.2 libhmsbeagle.so.1 || { rm -f libhmsbeagle.so.1 && ln -s libhmsbeagle.so.1.3.2 libhmsbeagle.so.1; }; })
libtool: install: (cd /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libhmsbeagle.so.1.3.2 libhmsbeagle.so || { rm -f libhmsbeagle.so && ln -s libhmsbeagle.so.1.3.2 libhmsbeagle.so; }; })
libtool: install: /usr/bin/install -c .libs/libhmsbeagle.lai /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle.la
libtool: install: /usr/bin/install -c .libs/libhmsbeagle.a /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle.a
libtool: install: chmod 644 /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle.a
libtool: install: ranlib /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle.a
libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf'
/bin/mkdir -p '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/include/libhmsbeagle-1/libhmsbeagle'
/usr/bin/install -c -m 644 beagle.h platform.h '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/include/libhmsbeagle-1/libhmsbeagle'
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle'
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle'
make[2]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle'
Making install in libhmsbeagle/JNI
make[2]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/JNI'
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/JNI'
/bin/mkdir -p '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf'
/bin/bash ../../libtool --mode=install /usr/bin/install -c libhmsbeagle-jni.la '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf'
libtool: warning: relinking 'libhmsbeagle-jni.la'
libtool: install: (cd /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/JNI; /bin/bash "/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libtool" --tag CXX --mode=relink g++ -O3 -std=c++11 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -module -avoid-version -Wl,-z,relro -Wl,-z,now -o libhmsbeagle-jni.la -rpath /usr/lib/arm-linux-gnueabihf libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.lo -L../../libhmsbeagle -lhmsbeagle -ldl -inst-prefix-dir /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp)
libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/8/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/8/crtbeginS.o .libs/libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.o -L../../libhmsbeagle -L/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lhmsbeagle -ldl -L/usr/lib/gcc/arm-linux-gnueabihf/8 -L/usr/lib/gcc/arm-linux-gnueabihf/8/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/8/../../.. -L/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/8/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/8/../../../arm-linux-gnueabihf/crtn.o -O3 -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libhmsbeagle-jni.so -o .libs/libhmsbeagle-jni.so
libtool: install: /usr/bin/install -c .libs/libhmsbeagle-jni.soT /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-jni.so
libtool: install: /usr/bin/install -c .libs/libhmsbeagle-jni.lai /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-jni.la
libtool: install: /usr/bin/install -c .libs/libhmsbeagle-jni.a /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-jni.a
libtool: install: chmod 644 /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-jni.a
libtool: install: ranlib /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-jni.a
libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf'
make[3]: Nothing to be done for 'install-data-am'.
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/JNI'
make[2]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/libhmsbeagle/JNI'
Making install in examples
make[2]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples'
Making install in synthetictest
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/synthetictest'
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/synthetictest'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/synthetictest'
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/synthetictest'
Making install in tinytest
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/tinytest'
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/tinytest'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/tinytest'
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/tinytest'
Making install in oddstatetest
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/oddstatetest'
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/oddstatetest'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/oddstatetest'
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/oddstatetest'
Making install in complextest
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/complextest'
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/complextest'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/complextest'
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/complextest'
Making install in fourtaxon
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/fourtaxon'
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/fourtaxon'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/fourtaxon'
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/fourtaxon'
Making install in matrixtest
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/matrixtest'
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/matrixtest'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/matrixtest'
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples/matrixtest'
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples'
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples'
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples'
make[2]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/examples'
make[2]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg'
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg'
make[3]: Nothing to be done for 'install-exec-am'.
/bin/mkdir -p '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig'
/usr/bin/install -c -m 644 hmsbeagle-1.pc '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig'
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg'
make[2]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg'
make[1]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg'
dh_install -a
cp --reflink=auto -a debian/tmp/usr/include/libhmsbeagle-1 debian/libhmsbeagle-dev//usr/include/
install -d debian/libhmsbeagle-dev//usr/lib/arm-linux-gnueabihf
cp --reflink=auto -a debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.a debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle.a debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so debian/libhmsbeagle-dev//usr/lib/arm-linux-gnueabihf/
install -d debian/libhmsbeagle-dev//usr/lib/arm-linux-gnueabihf/pkgconfig
cp --reflink=auto -a debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig/hmsbeagle-1.pc debian/libhmsbeagle-dev//usr/lib/arm-linux-gnueabihf/pkgconfig/
install -d debian/.debhelper/generated/libhmsbeagle-dev
install -d debian/libhmsbeagle1v5//usr/lib/arm-linux-gnueabihf
cp --reflink=auto -a debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so.31 debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so.31.0.0 debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-jni.so debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so.31 debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so.31.0.0 debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so.1 debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so.1.3.2 debian/libhmsbeagle1v5//usr/lib/arm-linux-gnueabihf/
install -d debian/.debhelper/generated/libhmsbeagle1v5
install -d debian/.debhelper/generated/libhmsbeagle-java
jh_installjavadoc -a
debian/rules override_dh_installdocs
make[1]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg'
dh_installdocs
install -d debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev
cd './doc/html/..' && find 'html' \( -type f -or -type l \) -and ! -empty -print0 | LC_ALL=C sort -z | xargs -0 -I {} cp --reflink=auto --parents -dp {} /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev
chown -R 0:0 debian/libhmsbeagle-dev/usr/share/doc
chmod -R u\+rw,go=rX debian/libhmsbeagle-dev/usr/share/doc
install -p -m0644 debian/README.Debian debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/README.Debian
install -p -m0644 debian/copyright debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/copyright
install -d debian/libhmsbeagle-dev/usr/share/doc-base/
install -p -m0644 debian/libhmsbeagle-dev.doc-base debian/libhmsbeagle-dev/usr/share/doc-base/libhmsbeagle
install -d debian/libhmsbeagle1v5/usr/share/doc/libhmsbeagle1v5
install -p -m0644 debian/copyright debian/libhmsbeagle1v5/usr/share/doc/libhmsbeagle1v5/copyright
install -d debian/libhmsbeagle-java/usr/share/doc/libhmsbeagle-java
install -p -m0644 debian/copyright debian/libhmsbeagle-java/usr/share/doc/libhmsbeagle-java/copyright
find debian/libhmsbeagle-dev -name jquery.js -delete
find debian/libhmsbeagle-dev -name "*.md5" -delete
make[1]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg'
dh_installchangelogs -a
install -p -m0644 debian/changelog debian/libhmsbeagle-java/usr/share/doc/libhmsbeagle-java/changelog.Debian
install -p -m0644 debian/changelog debian/libhmsbeagle1v5/usr/share/doc/libhmsbeagle1v5/changelog.Debian
install -p -m0644 debian/changelog debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/changelog.Debian
dh_installman -a
install -d debian/libhmsbeagle-dev/usr/share/man/man3/
install -p -m0644 ./doc/man/man3/beagle.h.3 debian/libhmsbeagle-dev/usr/share/man/man3/beagle.h.3
install -p -m0644 ./doc/man/man3/BeagleBenchmarkedResource.3 debian/libhmsbeagle-dev/usr/share/man/man3/BeagleBenchmarkedResource.3
install -p -m0644 ./doc/man/man3/BeagleBenchmarkedResourceList.3 debian/libhmsbeagle-dev/usr/share/man/man3/BeagleBenchmarkedResourceList.3
install -p -m0644 ./doc/man/man3/BeagleInstanceDetails.3 debian/libhmsbeagle-dev/usr/share/man/man3/BeagleInstanceDetails.3
install -p -m0644 ./doc/man/man3/BeagleOperation.3 debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperation.3
install -p -m0644 ./doc/man/man3/BeagleOperationByPartition.3 debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperationByPartition.3
install -p -m0644 ./doc/man/man3/BeagleResource.3 debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResource.3
install -p -m0644 ./doc/man/man3/BeagleResourceList.3 debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResourceList.3
man -l --recode UTF-8 ./debian/libhmsbeagle-dev/usr/share/man/man3/beagle.h.3 > debian/libhmsbeagle-dev/usr/share/man/man3/beagle.h.3.dh-new
man -l --recode UTF-8 ./debian/libhmsbeagle-dev/usr/share/man/man3/BeagleBenchmarkedResourceList.3 > debian/libhmsbeagle-dev/usr/share/man/man3/BeagleBenchmarkedResourceList.3.dh-new
man -l --recode UTF-8 ./debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperation.3 > debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperation.3.dh-new
man -l --recode UTF-8 ./debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResource.3 > debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResource.3.dh-new
mv debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperation.3.dh-new debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperation.3
man -l --recode UTF-8 ./debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperationByPartition.3 > debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperationByPartition.3.dh-new
mv debian/libhmsbeagle-dev/usr/share/man/man3/BeagleBenchmarkedResourceList.3.dh-new debian/libhmsbeagle-dev/usr/share/man/man3/BeagleBenchmarkedResourceList.3
man -l --recode UTF-8 ./debian/libhmsbeagle-dev/usr/share/man/man3/BeagleInstanceDetails.3 > debian/libhmsbeagle-dev/usr/share/man/man3/BeagleInstanceDetails.3.dh-new
mv debian/libhmsbeagle-dev/usr/share/man/man3/beagle.h.3.dh-new debian/libhmsbeagle-dev/usr/share/man/man3/beagle.h.3
man -l --recode UTF-8 ./debian/libhmsbeagle-dev/usr/share/man/man3/BeagleBenchmarkedResource.3 > debian/libhmsbeagle-dev/usr/share/man/man3/BeagleBenchmarkedResource.3.dh-new
mv debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResource.3.dh-new debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResource.3
man -l --recode UTF-8 ./debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResourceList.3 > debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResourceList.3.dh-new
mv debian/libhmsbeagle-dev/usr/share/man/man3/BeagleInstanceDetails.3.dh-new debian/libhmsbeagle-dev/usr/share/man/man3/BeagleInstanceDetails.3
chmod 0644 -- debian/libhmsbeagle-dev/usr/share/man/man3/BeagleBenchmarkedResourceList.3 debian/libhmsbeagle-dev/usr/share/man/man3/BeagleInstanceDetails.3
mv debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperationByPartition.3.dh-new debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperationByPartition.3
chmod 0644 -- debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperation.3 debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperationByPartition.3
mv debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResourceList.3.dh-new debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResourceList.3
chmod 0644 -- debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResource.3 debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResourceList.3
mv debian/libhmsbeagle-dev/usr/share/man/man3/BeagleBenchmarkedResource.3.dh-new debian/libhmsbeagle-dev/usr/share/man/man3/BeagleBenchmarkedResource.3
chmod 0644 -- debian/libhmsbeagle-dev/usr/share/man/man3/beagle.h.3 debian/libhmsbeagle-dev/usr/share/man/man3/BeagleBenchmarkedResource.3
dh_perl -a
rm -f debian/libhmsbeagle-dev.debhelper.log debian/libhmsbeagle-java.debhelper.log debian/libhmsbeagle1v5.debhelper.log
debian/rules override_dh_link
make[1]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg'
dh_link
rm -f debian/libhmsbeagle-dev/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so
ln -s libhmsbeagle.so.1.3.2 debian/libhmsbeagle-dev/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so
rm -f debian/libhmsbeagle-dev/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so
ln -s libhmsbeagle-opencl.so.31.0.0 debian/libhmsbeagle-dev/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so
rm -f debian/libhmsbeagle-dev/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so
ln -s libhmsbeagle-cpu.so.31.0.0 debian/libhmsbeagle-dev/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so
rm -f debian/libhmsbeagle-dev/usr/include/libhmsbeagle
ln -s libhmsbeagle-1 debian/libhmsbeagle-dev/usr/include/libhmsbeagle
rm -f debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so.1
ln -s libhmsbeagle.so.1.3.2 debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so.1
rm -f debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so.31
ln -s libhmsbeagle-opencl.so.31.0.0 debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so.31
rm -f debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so.31
ln -s libhmsbeagle-cpu.so.31.0.0 debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so.31
install -d debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/jni
rm -f debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/jni/libhmsbeagle-jni.so
ln -s ../libhmsbeagle-jni.so debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/jni/libhmsbeagle-jni.so
opencllib=`find debian/libhmsbeagle1v5/usr/lib -name "libhmsbeagle-opencl.so.*" | sed 's?debian/libhmsbeagle1v5/??' | grep -v '\.0$'` ; \
dh_link -plibhmsbeagle-dev ${opencllib} usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so
rm -f debian/libhmsbeagle-dev/usr/include/libhmsbeagle
ln -s libhmsbeagle-1 debian/libhmsbeagle-dev/usr/include/libhmsbeagle
rm -f debian/libhmsbeagle-dev/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so
ln -s libhmsbeagle-cpu.so.31.0.0 debian/libhmsbeagle-dev/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so
rm -f debian/libhmsbeagle-dev/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so
ln -s libhmsbeagle-opencl.so.31.0.0 debian/libhmsbeagle-dev/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so
rm -f debian/libhmsbeagle-dev/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so
ln -s libhmsbeagle.so.1.3.2 debian/libhmsbeagle-dev/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so
rm -f debian/libhmsbeagle-dev/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so
ln -s libhmsbeagle-opencl.so.31 debian/libhmsbeagle-dev/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so
rm -f debian/libhmsbeagle-dev/usr/include/libhmsbeagle
ln -s libhmsbeagle-1 debian/libhmsbeagle-dev/usr/include/libhmsbeagle
make[1]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg'
jh_installlibs -a
install -d debian/libhmsbeagle-java/usr/share/java
install -p -m0644 ./lib/beagle.jar debian/libhmsbeagle-java/usr/share/java/beagle-3.1.2.jar
rm -f debian/libhmsbeagle-java/usr/share/java/beagle.jar
ln -s beagle-3.1.2.jar debian/libhmsbeagle-java/usr/share/java/beagle.jar
jh_classpath -a
jh_manifest -a
find debian/libhmsbeagle-dev -name '*.jar'
find debian/libhmsbeagle1v5 -name '*.jar'
find debian/libhmsbeagle-java -name '*.jar'
Found usr/share/java/beagle-3.1.2.jar
Found symlink usr/share/java/beagle.jar
Reading manifest from debian/libhmsbeagle-java/usr/share/java/beagle-3.1.2.jar
No update of debian/libhmsbeagle-java/usr/share/java/beagle-3.1.2.jar required.
jh_depends -a
Searching /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/libhmsbeagle-dev for libhmsbeagle-dev
Searching
Found Jars:
Found Debs:
Adding substvars: java:Depends= java:Recommends=
Searching /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/libhmsbeagle1v5 for libhmsbeagle1v5
Searching
Found Jars:
Found Debs:
Adding substvars: java:Depends= java:Recommends=
Searching /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/libhmsbeagle-java for libhmsbeagle-java
Searching /<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg/debian/libhmsbeagle-java/usr/share/java/beagle-3.1.2.jar
Found Jars:
Found Debs:
Adding substvars: java:Depends= java:Recommends=
dh_strip_nondeterminism -a
Using 1550845862 as canonical time
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/bc_s.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/bdwn.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/beagle-dox.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/beagle_8h__incl.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/closed.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/doc.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/doxygen.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/folderclosed.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/folderopen.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/graph_legend.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/nav_f.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/nav_g.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/nav_h.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/open.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/splitbar.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/struct_beagle_benchmarked_resource_list__coll__graph.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/struct_beagle_resource_list__coll__graph.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/sync_off.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/sync_on.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/tab_a.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/tab_b.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/tab_h.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/tab_s.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/search/close.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/search/mag_sel.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/search/search_l.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/search/search_m.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/search/search_r.png using File::StripNondeterminism::handlers::png
Using 1550845862 as canonical time
Normalizing debian/libhmsbeagle-java/usr/share/java/beagle-3.1.2.jar using File::StripNondeterminism::handlers::jar
dh_compress -a
cd debian/libhmsbeagle-dev
cd debian/libhmsbeagle1v5
cd debian/libhmsbeagle-java
chmod a-x usr/share/doc/libhmsbeagle-java/changelog.Debian
chmod a-x usr/share/doc/libhmsbeagle1v5/changelog.Debian
gzip -9nf usr/share/doc/libhmsbeagle1v5/changelog.Debian
gzip -9nf usr/share/doc/libhmsbeagle-java/changelog.Debian
chmod a-x usr/share/doc/libhmsbeagle-dev/changelog.Debian usr/share/man/man3/BeagleBenchmarkedResource.3 usr/share/man/man3/BeagleBenchmarkedResourceList.3 usr/share/man/man3/BeagleInstanceDetails.3 usr/share/man/man3/BeagleOperation.3 usr/share/man/man3/BeagleOperationByPartition.3 usr/share/man/man3/BeagleResource.3 usr/share/man/man3/BeagleResourceList.3 usr/share/man/man3/beagle.h.3
gzip -9nf usr/share/doc/libhmsbeagle-dev/changelog.Debian usr/share/man/man3/BeagleBenchmarkedResource.3 usr/share/man/man3/BeagleBenchmarkedResourceList.3 usr/share/man/man3/BeagleInstanceDetails.3 usr/share/man/man3/BeagleOperation.3 usr/share/man/man3/BeagleOperationByPartition.3 usr/share/man/man3/BeagleResource.3 usr/share/man/man3/BeagleResourceList.3 usr/share/man/man3/beagle.h.3
cd '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg'
cd '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg'
cd '/<<BUILDDIR>>/libhmsbeagle-3.1.2+dfsg'
dh_fixperms -a
find debian/libhmsbeagle-dev -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/libhmsbeagle1v5 -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/libhmsbeagle-java -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/libhmsbeagle1v5 ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
find debian/libhmsbeagle-java ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
find debian/libhmsbeagle-java/usr/share/doc -type f -a -true -a ! -regex 'debian/libhmsbeagle-java/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
find debian/libhmsbeagle-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
find debian/libhmsbeagle1v5/usr/share/doc -type f -a -true -a ! -regex 'debian/libhmsbeagle1v5/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
find debian/libhmsbeagle-java/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
find debian/libhmsbeagle1v5/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
find debian/libhmsbeagle-java -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/libhmsbeagle-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libhmsbeagle-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
find debian/libhmsbeagle1v5 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/libhmsbeagle1v5/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
find debian/libhmsbeagle-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
find debian/libhmsbeagle-dev/usr/share/man debian/libhmsbeagle-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/libhmsbeagle-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/libhmsbeagle-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
dh_missing -a
dh_missing: usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.la exists in debian/tmp but is not installed to anywhere
dh_missing: usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.a exists in debian/tmp but is not installed to anywhere
dh_missing: usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.la exists in debian/tmp but is not installed to anywhere
dh_missing: usr/lib/arm-linux-gnueabihf/libhmsbeagle.la exists in debian/tmp but is not installed to anywhere
dh_missing: usr/lib/arm-linux-gnueabihf/libhmsbeagle-jni.la exists in debian/tmp but is not installed to anywhere
dh_missing: usr/lib/arm-linux-gnueabihf/libhmsbeagle-jni.a exists in debian/tmp but is not installed to anywhere
The following debhelper tools have reported what they installed (with files per package)
* dh_install: libhmsbeagle-dev (7), libhmsbeagle-java (0), libhmsbeagle1v5 (7)
* dh_installdocs: libhmsbeagle-dev (1), libhmsbeagle-java (0), libhmsbeagle1v5 (0)
* dh_installman: libhmsbeagle-dev (8), libhmsbeagle-java (0), libhmsbeagle1v5 (0)
If the missing files are installed by another tool, please file a bug against it.
When filing the report, if the tool is not part of debhelper itself, please reference the
"Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+).
(in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz)
Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built
For a short-term work-around: Add the files to debian/not-installed
dh_dwz -a
install -d debian/libhmsbeagle1v5/usr/lib/debug/.dwz/arm-linux-gnueabihf
dwz -q -mdebian/libhmsbeagle1v5/usr/lib/debug/.dwz/arm-linux-gnueabihf/libhmsbeagle1v5.debug -M/usr/lib/debug/.dwz/arm-linux-gnueabihf/libhmsbeagle1v5.debug -- debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so.31.0.0 debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-jni.so debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so.31.0.0 debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so.1.3.2
objcopy --compress-debug-sections debian/libhmsbeagle1v5/usr/lib/debug/.dwz/arm-linux-gnueabihf/libhmsbeagle1v5.debug
dh_strip -a
install -d debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/a9
objcopy --only-keep-debug --compress-debug-sections debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so.31.0.0 debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/a9/5de454a69c8adc3b73f815864f1294f75a08a7.debug
strip --strip-debug --remove-section=.comment --remove-section=.note --enable-deterministic-archives debian/libhmsbeagle-dev/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.a
strip --strip-debug --remove-section=.comment --remove-section=.note --enable-deterministic-archives debian/libhmsbeagle-dev/usr/lib/arm-linux-gnueabihf/libhmsbeagle.a
chmod 0644 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/a9/5de454a69c8adc3b73f815864f1294f75a08a7.debug
chown 0:0 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/a9/5de454a69c8adc3b73f815864f1294f75a08a7.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so.31.0.0
objcopy --add-gnu-debuglink debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/a9/5de454a69c8adc3b73f815864f1294f75a08a7.debug debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so.31.0.0
install -d debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/bc
objcopy --only-keep-debug --compress-debug-sections debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-jni.so debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/bc/e326640527f74ad084299dcb865c803ba66ad3.debug
chmod 0644 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/bc/e326640527f74ad084299dcb865c803ba66ad3.debug
chown 0:0 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/bc/e326640527f74ad084299dcb865c803ba66ad3.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-jni.so
objcopy --add-gnu-debuglink debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/bc/e326640527f74ad084299dcb865c803ba66ad3.debug debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-jni.so
install -d debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/ea
objcopy --only-keep-debug --compress-debug-sections debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so.31.0.0 debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/ea/ffae21d498ff39fce4fa2f1fe1590b2eec0c65.debug
chmod 0644 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/ea/ffae21d498ff39fce4fa2f1fe1590b2eec0c65.debug
chown 0:0 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/ea/ffae21d498ff39fce4fa2f1fe1590b2eec0c65.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so.31.0.0
objcopy --add-gnu-debuglink debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/ea/ffae21d498ff39fce4fa2f1fe1590b2eec0c65.debug debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so.31.0.0
install -d debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/0a
objcopy --only-keep-debug --compress-debug-sections debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so.1.3.2 debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/0a/062dac4660f8faa772583cc17aef638db36a57.debug
chmod 0644 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/0a/062dac4660f8faa772583cc17aef638db36a57.debug
chown 0:0 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/0a/062dac4660f8faa772583cc17aef638db36a57.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so.1.3.2
objcopy --add-gnu-debuglink debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/0a/062dac4660f8faa772583cc17aef638db36a57.debug debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so.1.3.2
install -d debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.dwz
cp --reflink=auto -a debian/libhmsbeagle1v5/usr/lib/debug/.dwz/arm-linux-gnueabihf debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.dwz
rm -fr debian/libhmsbeagle1v5/usr/lib/debug/.dwz
rmdir -p --ignore-fail-on-non-empty debian/libhmsbeagle1v5/usr/lib/debug
install -d debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/share/doc
ln -s libhmsbeagle1v5 debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/share/doc/libhmsbeagle1v5-dbgsym
dh_makeshlibs -a
rm -f debian/libhmsbeagle-dev/DEBIAN/shlibs
rm -f debian/libhmsbeagle1v5/DEBIAN/shlibs
install -d debian/libhmsbeagle1v5/DEBIAN
echo "libhmsbeagle-cpu 31 libhmsbeagle1v5 (>= 3.1.2+dfsg)" >> debian/libhmsbeagle1v5/DEBIAN/shlibs
echo "libhmsbeagle-opencl 31 libhmsbeagle1v5 (>= 3.1.2+dfsg)" >> debian/libhmsbeagle1v5/DEBIAN/shlibs
echo "libhmsbeagle 1 libhmsbeagle1v5 (>= 3.1.2+dfsg)" >> debian/libhmsbeagle1v5/DEBIAN/shlibs
chmod 0644 -- debian/libhmsbeagle1v5/DEBIAN/shlibs
chown 0:0 -- debian/libhmsbeagle1v5/DEBIAN/shlibs
mv debian/.debhelper/generated/libhmsbeagle1v5/triggers.new debian/.debhelper/generated/libhmsbeagle1v5/triggers
rm -f debian/libhmsbeagle-java/DEBIAN/shlibs
dh_shlibdeps -a
dpkg-shlibdeps -Tdebian/libhmsbeagle1v5.substvars debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so.31.0.0 debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-jni.so debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so.31.0.0 debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so.1.3.2
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so.31.0.0 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so.1.3.2 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so.31.0.0 found in none of the libraries
dh_installdeb -a
install -d debian/libhmsbeagle-dev/DEBIAN
install -p -m0644 debian/.debhelper/generated/libhmsbeagle1v5/triggers debian/libhmsbeagle1v5/DEBIAN/triggers
install -d debian/libhmsbeagle-java/DEBIAN
dh_gencontrol -a
echo misc:Depends= >> debian/libhmsbeagle-dev.substvars
echo misc:Pre-Depends= >> debian/libhmsbeagle-dev.substvars
dpkg-gencontrol -plibhmsbeagle-dev -ldebian/changelog -Tdebian/libhmsbeagle-dev.substvars -Pdebian/libhmsbeagle-dev -UMulti-Arch
echo misc:Depends= >> debian/libhmsbeagle-java.substvars
echo misc:Pre-Depends= >> debian/libhmsbeagle-java.substvars
dpkg-gencontrol -plibhmsbeagle-java -ldebian/changelog -Tdebian/libhmsbeagle-java.substvars -Pdebian/libhmsbeagle-java -UMulti-Arch
echo misc:Depends= >> debian/libhmsbeagle1v5.substvars
echo misc:Pre-Depends= >> debian/libhmsbeagle1v5.substvars
install -d debian/.debhelper/libhmsbeagle1v5/dbgsym-root/DEBIAN
dpkg-gencontrol -plibhmsbeagle1v5 -ldebian/changelog -Tdebian/libhmsbeagle1v5.substvars -Pdebian/.debhelper/libhmsbeagle1v5/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -DPackage=libhmsbeagle1v5-dbgsym "-DDepends=libhmsbeagle1v5 (= \${binary:Version})" "-DDescription=debug symbols for libhmsbeagle1v5" "-DBuild-Ids=0a062dac4660f8faa772583cc17aef638db36a57 a95de454a69c8adc3b73f815864f1294f75a08a7 bce326640527f74ad084299dcb865c803ba66ad3 eaffae21d498ff39fce4fa2f1fe1590b2eec0c65" -DSection=debug -UMulti-Arch -UReplaces -UBreaks
dpkg-gencontrol: warning: Depends field of package libhmsbeagle-dev: substitution variable ${shlibs:Depends} used, but is not defined
dpkg-gencontrol: warning: Depends field of package libhmsbeagle-java: substitution variable ${shlibs:Depends} used, but is not defined
chmod 0644 -- debian/libhmsbeagle-java/DEBIAN/control
chown 0:0 -- debian/libhmsbeagle-java/DEBIAN/control
chmod 0644 -- debian/libhmsbeagle-dev/DEBIAN/control
chown 0:0 -- debian/libhmsbeagle-dev/DEBIAN/control
chmod 0644 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/DEBIAN/control
chown 0:0 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/DEBIAN/control
dpkg-gencontrol -plibhmsbeagle1v5 -ldebian/changelog -Tdebian/libhmsbeagle1v5.substvars -Pdebian/libhmsbeagle1v5 -UMulti-Arch
chmod 0644 -- debian/libhmsbeagle1v5/DEBIAN/control
chown 0:0 -- debian/libhmsbeagle1v5/DEBIAN/control
dh_md5sums -a
cd debian/libhmsbeagle1v5 >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
cd debian/libhmsbeagle-java >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
cd debian/libhmsbeagle-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
chmod 0644 -- debian/libhmsbeagle-java/DEBIAN/md5sums
chown 0:0 -- debian/libhmsbeagle-java/DEBIAN/md5sums
chmod 0644 -- debian/libhmsbeagle1v5/DEBIAN/md5sums
chown 0:0 -- debian/libhmsbeagle1v5/DEBIAN/md5sums
cd debian/.debhelper/libhmsbeagle1v5/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
chmod 0644 -- debian/libhmsbeagle-dev/DEBIAN/md5sums
chown 0:0 -- debian/libhmsbeagle-dev/DEBIAN/md5sums
chmod 0644 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/DEBIAN/md5sums
chown 0:0 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/DEBIAN/md5sums
dh_builddeb -a
dpkg-deb --build debian/libhmsbeagle-dev ..
dpkg-deb --build debian/libhmsbeagle1v5 ..
dpkg-deb --build debian/.debhelper/libhmsbeagle1v5/dbgsym-root ..
dpkg-deb --build debian/libhmsbeagle-java ..
dpkg-deb: building package 'libhmsbeagle1v5-dbgsym' in '../libhmsbeagle1v5-dbgsym_3.1.2+dfsg-5_armhf.deb'.
dpkg-deb: building package 'libhmsbeagle-dev' in '../libhmsbeagle-dev_3.1.2+dfsg-5_armhf.deb'.
dpkg-deb: building package 'libhmsbeagle1v5' in '../libhmsbeagle1v5_3.1.2+dfsg-5_armhf.deb'.
dpkg-deb: building package 'libhmsbeagle-java' in '../libhmsbeagle-java_3.1.2+dfsg-5_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../libhmsbeagle_3.1.2+dfsg-5_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2019-03-05T05:25:00Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
libhmsbeagle_3.1.2+dfsg-5_armhf.changes:
----------------------------------------
Format: 1.8
Date: Fri, 22 Feb 2019 15:31:02 +0100
Source: libhmsbeagle
Binary: libhmsbeagle-dev libhmsbeagle1v5 libhmsbeagle-java
Architecture: armhf
Version: 3.1.2+dfsg-5
Distribution: buster-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
libhmsbeagle-dev - High-performance lib for Bayesian and Maximum Likelihood phylogen
libhmsbeagle-java - High-performance lib for Bayesian and Maximum Likelihood phylogen
libhmsbeagle1v5 - High-performance lib for Bayesian and Maximum Likelihood phylogen
Changes:
libhmsbeagle (3.1.2+dfsg-5) unstable; urgency=medium
.
* Re-add libhmsbeagle1v5.dirs
Checksums-Sha1:
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89a04b2b1648b1d8f06dd40e8619909f340ec288 28372 libhmsbeagle-java_3.1.2+dfsg-5_armhf.deb
f9b594ea05147e56f4ffb0e2ea667d65ec421c8d 1079236 libhmsbeagle1v5-dbgsym_3.1.2+dfsg-5_armhf.deb
282da4d062a749c30d8f91970b12defa5ad1b199 139128 libhmsbeagle1v5_3.1.2+dfsg-5_armhf.deb
198c46af496bb8c1d6c0aa3e612aaad445ca3285 13181 libhmsbeagle_3.1.2+dfsg-5_armhf.buildinfo
Checksums-Sha256:
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417055601698fe129591b284bc3e4e9aa1b9779d5ef2f741e2eae6d895d38918 28372 libhmsbeagle-java_3.1.2+dfsg-5_armhf.deb
b6c578f53eb4f2b72bcb09c870d93c4c91e6baaa61f599fb97d84579329dc7d6 1079236 libhmsbeagle1v5-dbgsym_3.1.2+dfsg-5_armhf.deb
24b6dcfc269edaf3c6ecfb7c771a880ef92716f60ea0fba5ff9813e8f2512705 139128 libhmsbeagle1v5_3.1.2+dfsg-5_armhf.deb
5b06d2b906fbd206529670856b2f5b8c108f984a2a23da354b6f3e8126b48573 13181 libhmsbeagle_3.1.2+dfsg-5_armhf.buildinfo
Files:
edc32143228b6345320032872729b4a5 216728 libdevel optional libhmsbeagle-dev_3.1.2+dfsg-5_armhf.deb
1c42224df214156c75124920029d32b0 28372 java optional libhmsbeagle-java_3.1.2+dfsg-5_armhf.deb
cd48b03056804f3d74153bfb270e1d7c 1079236 debug optional libhmsbeagle1v5-dbgsym_3.1.2+dfsg-5_armhf.deb
b5e478036aeb86313688fb8391c21ee4 139128 libs optional libhmsbeagle1v5_3.1.2+dfsg-5_armhf.deb
129b18d5bf116e4ccd8f1eac234b50b7 13181 libs optional libhmsbeagle_3.1.2+dfsg-5_armhf.buildinfo
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
libhmsbeagle-dev_3.1.2+dfsg-5_armhf.deb
---------------------------------------
new Debian package, version 2.0.
size 216728 bytes: control archive=4128 bytes.
1248 bytes, 26 lines control
12133 bytes, 135 lines md5sums
Package: libhmsbeagle-dev
Source: libhmsbeagle
Version: 3.1.2+dfsg-5
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1504
Depends: libhmsbeagle1v5 (= 3.1.2+dfsg-5)
Section: libdevel
Priority: optional
Homepage: https://github.com/beagle-dev/beagle-lib
Description: High-performance lib for Bayesian and Maximum Likelihood phylogenetics (devel)
BEAGLE is a high-performance library that can perform the core calculations at
the heart of most Bayesian and Maximum Likelihood phylogenetics packages. It
can make use of highly-parallel processors such as those in graphics cards
(GPUs) found in many PCs.
.
The project involves an open API and fast implementations of a library for
evaluating phylogenetic likelihoods (continuous time Markov processes) of
biomolecular sequence evolution.
.
The aim is to provide high performance evaluation 'services' to a wide range
of phylogenetic software, both Bayesian samplers and Maximum Likelihood
optimizers. This allows these packages to make use of implementations that
make use of optimized hardware such as graphics processing units.
.
This package contains development files needed to build against Beagle library.
drwxr-xr-x root/root 0 2019-02-22 14:31 ./
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/include/
lrwxrwxrwx root/root 0 2019-02-22 14:31 ./usr/include/libhmsbeagle -> libhmsbeagle-1
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/include/libhmsbeagle-1/
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/include/libhmsbeagle-1/libhmsbeagle/
-rw-r--r-- root/root 61027 2019-02-22 14:31 ./usr/include/libhmsbeagle-1/libhmsbeagle/beagle.h
-rw-r--r-- root/root 1637 2019-02-22 14:31 ./usr/include/libhmsbeagle-1/libhmsbeagle/platform.h
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/lib/
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/lib/arm-linux-gnueabihf/
-rw-r--r-- root/root 607166 2019-02-22 14:31 ./usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.a
lrwxrwxrwx root/root 0 2019-02-22 14:31 ./usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so -> libhmsbeagle-cpu.so.31.0.0
lrwxrwxrwx root/root 0 2019-02-22 14:31 ./usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so -> libhmsbeagle-opencl.so.31
-rw-r--r-- root/root 92568 2019-02-22 14:31 ./usr/lib/arm-linux-gnueabihf/libhmsbeagle.a
lrwxrwxrwx root/root 0 2019-02-22 14:31 ./usr/lib/arm-linux-gnueabihf/libhmsbeagle.so -> libhmsbeagle.so.1.3.2
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/lib/arm-linux-gnueabihf/pkgconfig/
-rw-r--r-- root/root 283 2019-02-22 14:31 ./usr/lib/arm-linux-gnueabihf/pkgconfig/hmsbeagle-1.pc
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/share/
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/share/doc-base/
-rw-r--r-- root/root 651 2019-02-22 14:31 ./usr/share/doc-base/libhmsbeagle
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/share/doc/
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/
-rw-r--r-- root/root 317 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/README.Debian
-rw-r--r-- root/root 2998 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/changelog.Debian.gz
-rw-r--r-- root/root 1350 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/copyright
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/
-rw-r--r-- root/root 5442 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/annotated.html
-rw-r--r-- root/root 676 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/bc_s.png
-rw-r--r-- root/root 147 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/bdwn.png
-rw-r--r-- root/root 5902 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/beagle-dox.png
-rw-r--r-- root/root 169796 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/beagle_8h.html
-rw-r--r-- root/root 69 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/beagle_8h__incl.map
-rw-r--r-- root/root 3790 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/beagle_8h__incl.png
-rw-r--r-- root/root 140966 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/beagle_8h_source.html
-rw-r--r-- root/root 4213 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/classes.html
-rw-r--r-- root/root 132 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/closed.png
-rw-r--r-- root/root 3748 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/dir_d98ec6a9a5b94c27cbb90dcc359fa8cf.html
-rw-r--r-- root/root 746 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/doc.png
-rw-r--r-- root/root 27960 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/doxygen.css
-rw-r--r-- root/root 3779 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/doxygen.png
-rw-r--r-- root/root 3140 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/dynsections.js
-rw-r--r-- root/root 3942 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/files.html
-rw-r--r-- root/root 616 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/folderclosed.png
-rw-r--r-- root/root 597 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/folderopen.png
-rw-r--r-- root/root 8642 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/functions.html
-rw-r--r-- root/root 8530 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/functions_vars.html
-rw-r--r-- root/root 15932 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/globals.html
-rw-r--r-- root/root 3213 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/globals_enum.html
-rw-r--r-- root/root 9927 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/globals_eval.html
-rw-r--r-- root/root 8263 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/globals_func.html
-rw-r--r-- root/root 6073 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/graph_legend.html
-rw-r--r-- root/root 19912 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/graph_legend.png
-rw-r--r-- root/root 2871 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/index.html
-rw-r--r-- root/root 1900 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/menu.js
-rw-r--r-- root/root 1688 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/menudata.js
-rw-r--r-- root/root 153 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/nav_f.png
-rw-r--r-- root/root 95 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/nav_g.png
-rw-r--r-- root/root 98 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/nav_h.png
-rw-r--r-- root/root 123 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/open.png
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/search/
-rw-r--r-- root/root 1013 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/search/all_0.html
-rw-r--r-- root/root 15394 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/search/all_0.js
-rw-r--r-- root/root 1013 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/search/all_1.html
-rw-r--r-- root/root 1375 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/search/all_1.js
-rw-r--r-- root/root 1013 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-dev/html/search/all_2.html
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-rw-r--r-- root/root 10098 2019-02-22 14:31 ./usr/share/man/man3/beagle.h.3.gz
libhmsbeagle-java_3.1.2+dfsg-5_armhf.deb
----------------------------------------
new Debian package, version 2.0.
size 28372 bytes: control archive=1016 bytes.
1187 bytes, 26 lines control
228 bytes, 3 lines md5sums
Package: libhmsbeagle-java
Source: libhmsbeagle
Version: 3.1.2+dfsg-5
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 37
Depends: libhmsbeagle1v5
Section: java
Priority: optional
Homepage: https://github.com/beagle-dev/beagle-lib
Description: High-performance lib for Bayesian and Maximum Likelihood phylogenetics (java)
BEAGLE is a high-performance library that can perform the core calculations at
the heart of most Bayesian and Maximum Likelihood phylogenetics packages. It
can make use of highly-parallel processors such as those in graphics cards
(GPUs) found in many PCs.
.
The project involves an open API and fast implementations of a library for
evaluating phylogenetic likelihoods (continuous time Markov processes) of
biomolecular sequence evolution.
.
The aim is to provide high performance evaluation 'services' to a wide range
of phylogenetic software, both Bayesian samplers and Maximum Likelihood
optimizers. This allows these packages to make use of implementations that
make use of optimized hardware such as graphics processing units.
.
This package contains the Java interface.
drwxr-xr-x root/root 0 2019-02-22 14:31 ./
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/share/
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/share/doc/
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-java/
-rw-r--r-- root/root 2998 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-java/changelog.Debian.gz
-rw-r--r-- root/root 1350 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle-java/copyright
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/share/java/
-rw-r--r-- root/root 24328 2019-02-22 14:31 ./usr/share/java/beagle-3.1.2.jar
lrwxrwxrwx root/root 0 2019-02-22 14:31 ./usr/share/java/beagle.jar -> beagle-3.1.2.jar
libhmsbeagle1v5-dbgsym_3.1.2+dfsg-5_armhf.deb
---------------------------------------------
new Debian package, version 2.0.
size 1079236 bytes: control archive=764 bytes.
533 bytes, 12 lines control
519 bytes, 5 lines md5sums
Package: libhmsbeagle1v5-dbgsym
Source: libhmsbeagle
Version: 3.1.2+dfsg-5
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1208
Depends: libhmsbeagle1v5 (= 3.1.2+dfsg-5)
Section: debug
Priority: optional
Description: debug symbols for libhmsbeagle1v5
Build-Ids: 0a062dac4660f8faa772583cc17aef638db36a57 a95de454a69c8adc3b73f815864f1294f75a08a7 bce326640527f74ad084299dcb865c803ba66ad3 eaffae21d498ff39fce4fa2f1fe1590b2eec0c65
drwxr-xr-x root/root 0 2019-02-22 14:31 ./
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/lib/
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drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/lib/debug/.build-id/0a/
-rw-r--r-- root/root 249176 2019-02-22 14:31 ./usr/lib/debug/.build-id/0a/062dac4660f8faa772583cc17aef638db36a57.debug
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/lib/debug/.build-id/a9/
-rw-r--r-- root/root 687628 2019-02-22 14:31 ./usr/lib/debug/.build-id/a9/5de454a69c8adc3b73f815864f1294f75a08a7.debug
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/lib/debug/.build-id/bc/
-rw-r--r-- root/root 49824 2019-02-22 14:31 ./usr/lib/debug/.build-id/bc/e326640527f74ad084299dcb865c803ba66ad3.debug
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/lib/debug/.build-id/ea/
-rw-r--r-- root/root 201784 2019-02-22 14:31 ./usr/lib/debug/.build-id/ea/ffae21d498ff39fce4fa2f1fe1590b2eec0c65.debug
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/lib/debug/.dwz/
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/
-rw-r--r-- root/root 29976 2019-02-22 14:31 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/libhmsbeagle1v5.debug
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/share/
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/share/doc/
lrwxrwxrwx root/root 0 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle1v5-dbgsym -> libhmsbeagle1v5
libhmsbeagle1v5_3.1.2+dfsg-5_armhf.deb
--------------------------------------
new Debian package, version 2.0.
size 139128 bytes: control archive=1292 bytes.
1305 bytes, 26 lines control
505 bytes, 6 lines md5sums
154 bytes, 3 lines shlibs
65 bytes, 2 lines triggers
Package: libhmsbeagle1v5
Source: libhmsbeagle
Version: 3.1.2+dfsg-5
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 2680
Depends: libc6 (>= 2.4), libgcc1 (>= 1:3.5), libstdc++6 (>= 7), ocl-icd-libopencl1 | libopencl1, beignet-opencl-icd | mesa-opencl-icd | opencl-icd
Conflicts: libhmsbeagle1
Replaces: libhmsbeagle1
Section: libs
Priority: optional
Homepage: https://github.com/beagle-dev/beagle-lib
Description: High-performance lib for Bayesian and Maximum Likelihood phylogenetics
BEAGLE is a high-performance library that can perform the core calculations at
the heart of most Bayesian and Maximum Likelihood phylogenetics packages. It
can make use of highly-parallel processors such as those in graphics cards
(GPUs) found in many PCs.
.
The project involves an open API and fast implementations of a library for
evaluating phylogenetic likelihoods (continuous time Markov processes) of
biomolecular sequence evolution.
.
The aim is to provide high performance evaluation 'services' to a wide range
of phylogenetic software, both Bayesian samplers and Maximum Likelihood
optimizers. This allows these packages to make use of implementations that
make use of optimized hardware such as graphics processing units.
drwxr-xr-x root/root 0 2019-02-22 14:31 ./
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/lib/
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/lib/arm-linux-gnueabihf/
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/lib/arm-linux-gnueabihf/jni/
lrwxrwxrwx root/root 0 2019-02-22 14:31 ./usr/lib/arm-linux-gnueabihf/jni/libhmsbeagle-jni.so -> ../libhmsbeagle-jni.so
lrwxrwxrwx root/root 0 2019-02-22 14:31 ./usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so.31 -> libhmsbeagle-cpu.so.31.0.0
-rw-r--r-- root/root 255528 2019-02-22 14:31 ./usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so.31.0.0
-rw-r--r-- root/root 22004 2019-02-22 14:31 ./usr/lib/arm-linux-gnueabihf/libhmsbeagle-jni.so
lrwxrwxrwx root/root 0 2019-02-22 14:31 ./usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so.31 -> libhmsbeagle-opencl.so.31.0.0
-rw-r--r-- root/root 2389544 2019-02-22 14:31 ./usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so.31.0.0
lrwxrwxrwx root/root 0 2019-02-22 14:31 ./usr/lib/arm-linux-gnueabihf/libhmsbeagle.so.1 -> libhmsbeagle.so.1.3.2
-rw-r--r-- root/root 54824 2019-02-22 14:31 ./usr/lib/arm-linux-gnueabihf/libhmsbeagle.so.1.3.2
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/share/
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/share/doc/
drwxr-xr-x root/root 0 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle1v5/
-rw-r--r-- root/root 2998 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle1v5/changelog.Debian.gz
-rw-r--r-- root/root 1350 2019-02-22 14:31 ./usr/share/doc/libhmsbeagle1v5/copyright
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 113920
Build-Time: 732
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 1642
Job: libhmsbeagle_3.1.2+dfsg-5
Machine Architecture: armhf
Package: libhmsbeagle
Package-Time: 2426
Source-Version: 3.1.2+dfsg-5
Space: 113920
Status: successful
Version: 3.1.2+dfsg-5
--------------------------------------------------------------------------------
Finished at 2019-03-05T05:25:00Z
Build needed 00:40:26, 113920k disc space