libhmsbeagle →
2.1.2+git20180307-1 →
armhf → 2018-04-16 05:54:40
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-01
+==============================================================================+
| libhmsbeagle 2.1.2+git20180307-1 (armhf) Mon, 16 Apr 2018 05:20:46 +0000 |
+==============================================================================+
Package: libhmsbeagle
Version: 2.1.2+git20180307-1
Source Version: 2.1.2+git20180307-1
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/run/schroot/mount/buster-staging-armhf-sbuild-d5b55702-bda9-4178-a705-2286b1647111' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [10.7 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [12.5 MB]
Fetched 23.2 MB in 27s (849 kB/s)
Reading package lists...
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'libhmsbeagle' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/libhmsbeagle.git
Please use:
git clone https://salsa.debian.org/med-team/libhmsbeagle.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 268 kB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main libhmsbeagle 2.1.2+git20180307-1 (dsc) [2444 B]
Get:2 http://172.17.0.1/private buster-staging/main libhmsbeagle 2.1.2+git20180307-1 (tar) [229 kB]
Get:3 http://172.17.0.1/private buster-staging/main libhmsbeagle 2.1.2+git20180307-1 (diff) [35.7 kB]
Fetched 268 kB in 0s (2431 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/libhmsbeagle-8ADv6e/libhmsbeagle-2.1.2+git20180307' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/libhmsbeagle-8ADv6e' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-USbadu/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-USbadu/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-USbadu/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-USbadu/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-USbadu/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-USbadu/apt_archive ./ Release.gpg [370 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-USbadu/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-USbadu/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-USbadu/apt_archive ./ Packages [431 B]
Fetched 2107 B in 1s (2943 B/s)
Reading package lists...
W: copy:///<<BUILDDIR>>/resolver-USbadu/apt_archive/./Release.gpg: The key(s) in the keyring /etc/apt/trusted.gpg.d/sbuild-build-depends-archive.gpg are ignored as the file is not readable by user '_apt' executing apt-key.
W: GPG error: copy:/<<BUILDDIR>>/resolver-USbadu/apt_archive ./ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 35506D9A48F77B2E
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates e2fsprogs-l10n libsasl2-modules libssl1.1 openssl
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 2 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-USbadu/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (16.8 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 15494 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in linux-any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 11~), doxygen, graphviz, javahelper, default-jdk (>= 1:1.6), ant, dh-linktree, libjs-jquery, ocl-icd-opencl-dev | opencl-dev, clinfo
Filtered Build-Depends: debhelper (>= 11~), doxygen, graphviz, javahelper, default-jdk (>= 1:1.6), ant, dh-linktree, libjs-jquery, ocl-icd-opencl-dev, clinfo
dpkg-deb: building package 'sbuild-build-depends-libhmsbeagle-dummy' in '/<<BUILDDIR>>/resolver-USbadu/apt_archive/sbuild-build-depends-libhmsbeagle-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-libhmsbeagle-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-USbadu/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-USbadu/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-USbadu/apt_archive ./ Release.gpg [370 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-USbadu/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-USbadu/apt_archive ./ Sources [596 B]
Get:5 copy:/<<BUILDDIR>>/resolver-USbadu/apt_archive ./ Packages [653 B]
Fetched 2582 B in 1s (3515 B/s)
Reading package lists...
W: copy:///<<BUILDDIR>>/resolver-USbadu/apt_archive/./Release.gpg: The key(s) in the keyring /etc/apt/trusted.gpg.d/sbuild-build-depends-archive.gpg are ignored as the file is not readable by user '_apt' executing apt-key.
W: GPG error: copy:/<<BUILDDIR>>/resolver-USbadu/apt_archive ./ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 35506D9A48F77B2E
Reading package lists...
Install libhmsbeagle build dependencies (apt-based resolver)
------------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
e2fsprogs-l10n libsasl2-modules
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
adwaita-icon-theme ant autoconf automake autopoint autotools-dev
bsdmainutils ca-certificates-java cgmanager clinfo dbus dbus-user-session
dconf-gsettings-backend dconf-service dctrl-tools debhelper default-jdk
default-jdk-headless default-jre default-jre-headless devscripts
dh-autoreconf dh-linktree dh-python dh-strip-nondeterminism doxygen file
fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base
glib-networking glib-networking-common glib-networking-services graphviz
groff-base gsettings-desktop-schemas gtk-update-icon-cache
hicolor-icon-theme intltool-debian java-common javahelper libann0
libarchive-zip-perl libasound2 libasound2-data libatk-bridge2.0-0
libatk-wrapper-java libatk-wrapper-java-jni libatk1.0-0 libatk1.0-data
libatspi2.0-0 libavahi-client3 libavahi-common-data libavahi-common3 libbsd0
libcairo-gobject2 libcairo2 libcdt5 libcgmanager0 libcgraph6 libclang1-6.0
libcolord2 libcroco3 libcups2 libdatrie1 libdconf1 libdrm-amdgpu1
libdrm-etnaviv1 libdrm-freedreno1 libdrm-nouveau2 libdrm-radeon1 libedit2
libelf1 libepoxy0 libexpat1 libfile-homedir-perl
libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1
libfontenc1 libfreetype6 libfribidi0 libgd3 libgdk-pixbuf2.0-0
libgdk-pixbuf2.0-common libgif7 libgl1 libgl1-mesa-dri libgl1-mesa-glx
libglapi-mesa libglib2.0-0 libglvnd0 libglx-mesa0 libglx0 libgraphite2-3
libgssapi-krb5-2 libgtk-3-0 libgtk-3-common libgtk2.0-0 libgtk2.0-common
libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz0b libice6 libicu57 libjbig0
libjpeg62-turbo libjs-jquery libjson-glib-1.0-0 libjson-glib-1.0-common
libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblab-gamut1 liblcms2-2
libllvm5.0 libllvm6.0 libltdl7 libmagic-mgc libmagic1 libmpdec2 libnih-dbus1
libnih1 libnspr4 libnss3 libpam-systemd libpango-1.0-0 libpangocairo-1.0-0
libpangoft2-1.0-0 libpathplan4 libpcsclite1 libpipeline1 libpixman-1-0
libproxy1v5 libpython3-stdlib libpython3.6-minimal libpython3.6-stdlib
librest-0.7-0 librsvg2-2 librsvg2-common libsensors4 libsigsegv2 libsm6
libsoup-gnome2.4-1 libsoup2.4-1 libthai-data libthai0 libtiff5
libtimedate-perl libtool libwebp6 libx11-6 libx11-data libx11-xcb1
libxapian30 libxau6 libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0
libxcb-present0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1
libxcb-xfixes0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6
libxdot4 libxext6 libxfixes3 libxft2 libxi6 libxinerama1 libxml2 libxmu6
libxmuu1 libxpm4 libxrandr2 libxrender1 libxshmfence1 libxt6 libxtst6 libxv1
libxxf86dga1 libxxf86vm1 m4 man-db mime-support ocl-icd-libopencl1
ocl-icd-opencl-dev opencl-c-headers openjdk-9-jdk openjdk-9-jdk-headless
openjdk-9-jre openjdk-9-jre-headless po-debconf python3 python3-distutils
python3-lib2to3 python3-minimal python3.6 python3.6-minimal shared-mime-info
systemd-shim ucf x11-common x11-utils
Suggested packages:
ant-doc autoconf-archive gnu-standards autoconf-doc wamerican | wordlist
whois vacation debtags dh-make dwz adequate autopkgtest bls-standalone
bsd-mailx | mailx check-all-the-things cvs-buildpackage devscripts-el
diffoscope disorderfs dose-extra duck faketime gnuplot how-can-i-help
libauthen-sasl-perl libfile-desktopentry-perl libnet-smtps-perl
libterm-size-perl libyaml-syck-perl mozilla-devscripts mutt piuparts
postgresql-client quilt ratt reprotest ssh-client svn-buildpackage w3m
doxygen-latex doxygen-doc doxygen-gui gettext-doc libasprintf-dev
libgettextpo-dev gsfonts graphviz-doc groff cvs gawk tofrodos
libasound2-plugins alsa-utils colord cups-common libgd-tools krb5-doc
krb5-user gvfs liblcms2-utils pcscd librsvg2-bin lm-sensors libtool-doc
gfortran | fortran95-compiler gcj-jdk xapian-tools m4-doc apparmor less
www-browser opencl-icd openjdk-9-demo openjdk-9-source visualvm
icedtea-8-plugin libnss-mdns fonts-dejavu-extra fonts-ipafont-gothic
fonts-ipafont-mincho fonts-wqy-microhei | fonts-wqy-zenhei fonts-indic
libmail-box-perl python3-doc python3-tk python3-venv python3.6-venv
python3.6-doc binfmt-support pm-utils mesa-utils
Recommended packages:
ant-optional systemd-sysv default-java-plugin at dput | dupload
libdistro-info-perl libencode-locale-perl libgit-wrapper-perl
liblist-compare-perl liburi-perl libwww-perl licensecheck lintian patchutils
python3-apt python3-debian python3-magic python3-requests python3-unidiff
python3-xdg strace unzip wdiff wget | curl debian-keyring equivs
liblwp-protocol-https-perl libsoap-lite-perl curl | wget | lynx
fonts-liberation at-spi2-core libarchive-cpio-perl libgdk-pixbuf2.0-bin
libglib2.0-data xdg-user-dirs libgtk-3-bin libgail-common libgtk2.0-bin
libgts-bin javascript-common krb5-locales libltdl-dev libgl1-mesa-dev
| libgl-dev libpoclu-dev libxt-dev fonts-dejavu-extra libmail-sendmail-perl
The following NEW packages will be installed:
adwaita-icon-theme ant autoconf automake autopoint autotools-dev
bsdmainutils ca-certificates-java cgmanager clinfo dbus dbus-user-session
dconf-gsettings-backend dconf-service dctrl-tools debhelper default-jdk
default-jdk-headless default-jre default-jre-headless devscripts
dh-autoreconf dh-linktree dh-python dh-strip-nondeterminism doxygen file
fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base
glib-networking glib-networking-common glib-networking-services graphviz
groff-base gsettings-desktop-schemas gtk-update-icon-cache
hicolor-icon-theme intltool-debian java-common javahelper libann0
libarchive-zip-perl libasound2 libasound2-data libatk-bridge2.0-0
libatk-wrapper-java libatk-wrapper-java-jni libatk1.0-0 libatk1.0-data
libatspi2.0-0 libavahi-client3 libavahi-common-data libavahi-common3 libbsd0
libcairo-gobject2 libcairo2 libcdt5 libcgmanager0 libcgraph6 libclang1-6.0
libcolord2 libcroco3 libcups2 libdatrie1 libdconf1 libdrm-amdgpu1
libdrm-etnaviv1 libdrm-freedreno1 libdrm-nouveau2 libdrm-radeon1 libedit2
libelf1 libepoxy0 libexpat1 libfile-homedir-perl
libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1
libfontenc1 libfreetype6 libfribidi0 libgd3 libgdk-pixbuf2.0-0
libgdk-pixbuf2.0-common libgif7 libgl1 libgl1-mesa-dri libgl1-mesa-glx
libglapi-mesa libglib2.0-0 libglvnd0 libglx-mesa0 libglx0 libgraphite2-3
libgssapi-krb5-2 libgtk-3-0 libgtk-3-common libgtk2.0-0 libgtk2.0-common
libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz0b libice6 libicu57 libjbig0
libjpeg62-turbo libjs-jquery libjson-glib-1.0-0 libjson-glib-1.0-common
libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblab-gamut1 liblcms2-2
libllvm5.0 libllvm6.0 libltdl7 libmagic-mgc libmagic1 libmpdec2 libnih-dbus1
libnih1 libnspr4 libnss3 libpam-systemd libpango-1.0-0 libpangocairo-1.0-0
libpangoft2-1.0-0 libpathplan4 libpcsclite1 libpipeline1 libpixman-1-0
libproxy1v5 libpython3-stdlib libpython3.6-minimal libpython3.6-stdlib
librest-0.7-0 librsvg2-2 librsvg2-common libsensors4 libsigsegv2 libsm6
libsoup-gnome2.4-1 libsoup2.4-1 libthai-data libthai0 libtiff5
libtimedate-perl libtool libwebp6 libx11-6 libx11-data libx11-xcb1
libxapian30 libxau6 libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0
libxcb-present0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1
libxcb-xfixes0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6
libxdot4 libxext6 libxfixes3 libxft2 libxi6 libxinerama1 libxml2 libxmu6
libxmuu1 libxpm4 libxrandr2 libxrender1 libxshmfence1 libxt6 libxtst6 libxv1
libxxf86dga1 libxxf86vm1 m4 man-db mime-support ocl-icd-libopencl1
ocl-icd-opencl-dev opencl-c-headers openjdk-9-jdk openjdk-9-jdk-headless
openjdk-9-jre openjdk-9-jre-headless po-debconf python3 python3-distutils
python3-lib2to3 python3-minimal python3.6 python3.6-minimal
sbuild-build-depends-libhmsbeagle-dummy shared-mime-info systemd-shim ucf
x11-common x11-utils
0 upgraded, 216 newly installed, 0 to remove and 2 not upgraded.
Need to get 213 MB/213 MB of archives.
After this operation, 763 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-USbadu/apt_archive ./ sbuild-build-depends-libhmsbeagle-dummy 0.invalid.0 [940 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.8.7-1 [96.8 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.3-10 [1005 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.5.0-1 [24.6 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.8.3-2 [1146 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf libfreetype6 armhf 2.8.1-2 [402 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf ucf all 3.0038 [67.8 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf fonts-dejavu-core all 2.37-1 [1068 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf fontconfig-config all 2.12.6-0.1 [304 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf libfontconfig1 armhf 2.12.6-0.1 [351 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf fontconfig armhf 2.12.6-0.1 [438 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf libxcb1 armhf 1.13-1 [131 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf libx11-data all 2:1.6.5-1 [292 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf libx11-6 armhf 2:1.6.5-1 [683 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf libxext6 armhf 2:1.3.3-1+b2 [47.8 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf libxxf86dga1 armhf 2:1.1.4-1 [22.4 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf libpython3.6-minimal armhf 3.6.5~rc1-1 [565 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf python3.6-minimal armhf 3.6.5~rc1-1 [1234 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf libpython3.6-stdlib armhf 3.6.5~rc1-1 [1585 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf python3-lib2to3 all 3.6.5~rc1-1 [79.0 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf python3-distutils all 3.6.5~rc1-1 [147 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf python3.6 armhf 3.6.5~rc1-1 [229 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf libpython3-stdlib armhf 3.6.4-1 [19.3 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf dh-python all 3.20180326 [93.2 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf python3 armhf 3.6.4-1 [22.3 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf dbus armhf 1.12.6-2 [206 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.32-2 [225 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.32-2 [105 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.32-2 [63.8 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-6 [117 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf libedit2 armhf 3.1-20170329-1 [69.0 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf libkeyutils1 armhf 1.5.9-9.2 [12.1 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.56.0-4 [2749 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf libnih1 armhf 1.0.3-10+b9 [125 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf libnih-dbus1 armhf 1.0.3-10+b9 [97.2 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf libcgmanager0 armhf 0.41-2 [42.9 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf cgmanager armhf 0.41-2 [76.5 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf systemd-shim armhf 10-3+b6 [17.9 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf libpam-systemd armhf 238-4 [173 kB]
Get:43 http://172.17.0.1/private buster-staging/main armhf hicolor-icon-theme all 0.17-2 [11.4 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf libjpeg62-turbo armhf 1:1.5.2-2+b1 [110 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf libtiff5 armhf 4.0.9-4 [224 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf libicu57 armhf 57.1-9 [7414 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf libxml2 armhf 2.9.4+dfsg1-6.1 [602 kB]
Get:49 http://172.17.0.1/private buster-staging/main armhf shared-mime-info armhf 1.9-2 [749 kB]
Get:50 http://172.17.0.1/private buster-staging/main armhf libgdk-pixbuf2.0-common all 2.36.11-2 [312 kB]
Get:51 http://172.17.0.1/private buster-staging/main armhf libgdk-pixbuf2.0-0 armhf 2.36.11-2 [153 kB]
Get:52 http://172.17.0.1/private buster-staging/main armhf gtk-update-icon-cache armhf 3.22.29-3+rpi1 [77.9 kB]
Get:53 http://172.17.0.1/private buster-staging/main armhf libpixman-1-0 armhf 0.34.0-2 [451 kB]
Get:54 http://172.17.0.1/private buster-staging/main armhf libxcb-render0 armhf 1.13-1 [107 kB]
Get:55 http://172.17.0.1/private buster-staging/main armhf libxcb-shm0 armhf 1.13-1 [98.3 kB]
Get:56 http://172.17.0.1/private buster-staging/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get:57 http://172.17.0.1/private buster-staging/main armhf libcairo2 armhf 1.15.10-1 [573 kB]
Get:58 http://172.17.0.1/private buster-staging/main armhf libcroco3 armhf 0.6.12-2 [132 kB]
Get:59 http://172.17.0.1/private buster-staging/main armhf libfribidi0 armhf 0.19.7-2 [44.1 kB]
Get:60 http://172.17.0.1/private buster-staging/main armhf libthai-data all 0.1.27-2 [168 kB]
Get:61 http://172.17.0.1/private buster-staging/main armhf libdatrie1 armhf 0.2.10-7 [33.4 kB]
Get:62 http://172.17.0.1/private buster-staging/main armhf libthai0 armhf 0.1.27-2 [50.2 kB]
Get:63 http://172.17.0.1/private buster-staging/main armhf libpango-1.0-0 armhf 1.42.0-1 [158 kB]
Get:64 http://172.17.0.1/private buster-staging/main armhf libgraphite2-3 armhf 1.3.11-2 [73.5 kB]
Get:65 http://172.17.0.1/private buster-staging/main armhf libharfbuzz0b armhf 1.7.2-1 [705 kB]
Get:66 http://172.17.0.1/private buster-staging/main armhf libpangoft2-1.0-0 armhf 1.42.0-1 [53.2 kB]
Get:67 http://172.17.0.1/private buster-staging/main armhf libpangocairo-1.0-0 armhf 1.42.0-1 [43.3 kB]
Get:68 http://172.17.0.1/private buster-staging/main armhf librsvg2-2 armhf 2.40.20-2 [285 kB]
Get:69 http://172.17.0.1/private buster-staging/main armhf librsvg2-common armhf 2.40.20-2 [209 kB]
Get:70 http://172.17.0.1/private buster-staging/main armhf adwaita-icon-theme all 3.28.0-1 [11.7 MB]
Get:71 http://172.17.0.1/private buster-staging/main armhf libnspr4 armhf 2:4.19-1 [94.3 kB]
Get:72 http://172.17.0.1/private buster-staging/main armhf libnss3 armhf 2:3.35-2 [930 kB]
Get:73 http://172.17.0.1/private buster-staging/main armhf ca-certificates-java all 20170930 [14.9 kB]
Get:74 http://172.17.0.1/private buster-staging/main armhf java-common all 0.63 [14.0 kB]
Get:75 http://172.17.0.1/private buster-staging/main armhf libavahi-common-data armhf 0.7-3.1+b1 [122 kB]
Get:76 http://172.17.0.1/private buster-staging/main armhf libavahi-common3 armhf 0.7-3.1+b1 [51.1 kB]
Get:77 http://172.17.0.1/private buster-staging/main armhf libavahi-client3 armhf 0.7-3.1+b1 [53.7 kB]
Get:78 http://172.17.0.1/private buster-staging/main armhf libkrb5support0 armhf 1.16-2 [59.0 kB]
Get:79 http://172.17.0.1/private buster-staging/main armhf libk5crypto3 armhf 1.16-2 [116 kB]
Get:80 http://172.17.0.1/private buster-staging/main armhf libkrb5-3 armhf 1.16-2 [265 kB]
Get:81 http://172.17.0.1/private buster-staging/main armhf libgssapi-krb5-2 armhf 1.16-2 [135 kB]
Get:82 http://172.17.0.1/private buster-staging/main armhf libcups2 armhf 2.2.7-2 [284 kB]
Get:83 http://172.17.0.1/private buster-staging/main armhf liblcms2-2 armhf 2.9-1 [117 kB]
Get:84 http://172.17.0.1/private buster-staging/main armhf libpcsclite1 armhf 1.8.23-2 [55.1 kB]
Get:85 http://172.17.0.1/private buster-staging/main armhf libxi6 armhf 2:1.7.9-1 [77.8 kB]
Get:86 http://172.17.0.1/private buster-staging/main armhf x11-common all 1:7.7+19 [251 kB]
Get:87 http://172.17.0.1/private buster-staging/main armhf libxtst6 armhf 2:1.2.3-1 [26.3 kB]
Get:88 http://172.17.0.1/private buster-staging/main armhf openjdk-9-jre-headless armhf 9.0.4+12-4 [35.5 MB]
Get:89 http://172.17.0.1/private buster-staging/main armhf default-jre-headless armhf 2:1.9-63 [10.4 kB]
Get:90 http://172.17.0.1/private buster-staging/main armhf ant all 1.10.3-1 [2069 kB]
Get:91 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.12-1 [32.2 kB]
Get:92 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-1 [185 kB]
Get:93 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:94 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:95 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.15.1-3.1 [736 kB]
Get:96 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-6 [434 kB]
Get:97 http://172.17.0.1/private buster-staging/main armhf ocl-icd-libopencl1 armhf 2.2.12-1 [35.4 kB]
Get:98 http://172.17.0.1/private buster-staging/main armhf clinfo armhf 2.2.18.03.26-1 [36.3 kB]
Get:99 http://172.17.0.1/private buster-staging/main armhf dbus-user-session armhf 1.12.6-2 [89.5 kB]
Get:100 http://172.17.0.1/private buster-staging/main armhf libdconf1 armhf 0.28.0-2 [33.1 kB]
Get:101 http://172.17.0.1/private buster-staging/main armhf dconf-service armhf 0.28.0-2 [30.8 kB]
Get:102 http://172.17.0.1/private buster-staging/main armhf dconf-gsettings-backend armhf 0.28.0-2 [22.5 kB]
Get:103 http://172.17.0.1/private buster-staging/main armhf dctrl-tools armhf 2.24-2 [94.4 kB]
Get:104 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-2 [545 kB]
Get:105 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 17 [16.5 kB]
Get:106 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.60-1 [95.6 kB]
Get:107 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 0.040-1 [18.4 kB]
Get:108 http://172.17.0.1/private buster-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:109 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 0.040-1 [11.8 kB]
Get:110 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-6 [1218 kB]
Get:111 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:112 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.20 [247 kB]
Get:113 http://172.17.0.1/private buster-staging/main armhf debhelper all 11.2.1 [1013 kB]
Get:114 http://172.17.0.1/private buster-staging/main armhf libgtk-3-common all 3.22.29-3+rpi1 [3510 kB]
Get:115 http://172.17.0.1/private buster-staging/main armhf libatk1.0-data all 2.28.1-1 [145 kB]
Get:116 http://172.17.0.1/private buster-staging/main armhf libatk1.0-0 armhf 2.28.1-1 [42.2 kB]
Get:117 http://172.17.0.1/private buster-staging/main armhf libatspi2.0-0 armhf 2.28.0-1 [53.6 kB]
Get:118 http://172.17.0.1/private buster-staging/main armhf libatk-bridge2.0-0 armhf 2.26.2-1 [51.5 kB]
Get:119 http://172.17.0.1/private buster-staging/main armhf libcairo-gobject2 armhf 1.15.10-1 [101 kB]
Get:120 http://172.17.0.1/private buster-staging/main armhf libcolord2 armhf 1.3.3-2 [240 kB]
Get:121 http://172.17.0.1/private buster-staging/main armhf libepoxy0 armhf 1.4.3-1 [213 kB]
Get:122 http://172.17.0.1/private buster-staging/main armhf libjson-glib-1.0-common all 1.4.2-3 [50.4 kB]
Get:123 http://172.17.0.1/private buster-staging/main armhf libjson-glib-1.0-0 armhf 1.4.2-3 [51.8 kB]
Get:124 http://172.17.0.1/private buster-staging/main armhf libproxy1v5 armhf 0.4.15-1 [48.4 kB]
Get:125 http://172.17.0.1/private buster-staging/main armhf glib-networking-common all 2.56.0-1 [55.4 kB]
Get:126 http://172.17.0.1/private buster-staging/main armhf glib-networking-services armhf 2.56.0-1 [12.3 kB]
Get:127 http://172.17.0.1/private buster-staging/main armhf gsettings-desktop-schemas all 3.28.0-1 [522 kB]
Get:128 http://172.17.0.1/private buster-staging/main armhf glib-networking armhf 2.56.0-1 [54.3 kB]
Get:129 http://172.17.0.1/private buster-staging/main armhf libsoup2.4-1 armhf 2.62.0-1 [255 kB]
Get:130 http://172.17.0.1/private buster-staging/main armhf libsoup-gnome2.4-1 armhf 2.62.0-1 [16.6 kB]
Get:131 http://172.17.0.1/private buster-staging/main armhf librest-0.7-0 armhf 0.8.0-2 [27.8 kB]
Get:132 http://172.17.0.1/private buster-staging/main armhf libxcomposite1 armhf 1:0.4.4-2 [16.1 kB]
Get:133 http://172.17.0.1/private buster-staging/main armhf libxfixes3 armhf 1:5.0.3-1 [20.6 kB]
Get:134 http://172.17.0.1/private buster-staging/main armhf libxcursor1 armhf 1:1.1.15-1 [33.4 kB]
Get:135 http://172.17.0.1/private buster-staging/main armhf libxdamage1 armhf 1:1.1.4-3 [14.0 kB]
Get:136 http://172.17.0.1/private buster-staging/main armhf libxinerama1 armhf 2:1.1.3-1+b3 [16.3 kB]
Get:137 http://172.17.0.1/private buster-staging/main armhf libxrandr2 armhf 2:1.5.1-1 [34.5 kB]
Get:138 http://172.17.0.1/private buster-staging/main armhf libgtk-3-0 armhf 3.22.29-3+rpi1 [2070 kB]
Get:139 http://172.17.0.1/private buster-staging/main armhf libglvnd0 armhf 1.0.0-2 [52.8 kB]
Get:140 http://172.17.0.1/private buster-staging/main armhf libglapi-mesa armhf 17.3.8-1 [69.2 kB]
Get:141 http://172.17.0.1/private buster-staging/main armhf libx11-xcb1 armhf 2:1.6.5-1 [185 kB]
Get:142 http://172.17.0.1/private buster-staging/main armhf libxcb-dri2-0 armhf 1.13-1 [99.4 kB]
Get:143 http://172.17.0.1/private buster-staging/main armhf libxcb-dri3-0 armhf 1.13-1 [99.2 kB]
Get:144 http://172.17.0.1/private buster-staging/main armhf libxcb-glx0 armhf 1.13-1 [113 kB]
Get:145 http://172.17.0.1/private buster-staging/main armhf libxcb-present0 armhf 1.13-1 [98.2 kB]
Get:146 http://172.17.0.1/private buster-staging/main armhf libxcb-sync1 armhf 1.13-1 [101 kB]
Get:147 http://172.17.0.1/private buster-staging/main armhf libxcb-xfixes0 armhf 1.13-1 [102 kB]
Get:148 http://172.17.0.1/private buster-staging/main armhf libxshmfence1 armhf 1.3-1 [8636 B]
Get:149 http://172.17.0.1/private buster-staging/main armhf libxxf86vm1 armhf 1:1.1.4-1+b2 [20.1 kB]
Get:150 http://172.17.0.1/private buster-staging/main armhf libdrm-amdgpu1 armhf 2.4.91-2+rpi1 [26.9 kB]
Get:151 http://172.17.0.1/private buster-staging/main armhf libdrm-etnaviv1 armhf 2.4.91-2+rpi1 [19.9 kB]
Get:152 http://172.17.0.1/private buster-staging/main armhf libdrm-freedreno1 armhf 2.4.91-2+rpi1 [25.1 kB]
Get:153 http://172.17.0.1/private buster-staging/main armhf libdrm-nouveau2 armhf 2.4.91-2+rpi1 [24.3 kB]
Get:154 http://172.17.0.1/private buster-staging/main armhf libdrm-radeon1 armhf 2.4.91-2+rpi1 [28.8 kB]
Get:155 http://172.17.0.1/private buster-staging/main armhf libelf1 armhf 0.170-0.4 [160 kB]
Get:156 http://172.17.0.1/private buster-staging/main armhf libllvm5.0 armhf 1:5.0.1-4+rpi1 [11.8 MB]
Get:157 http://172.17.0.1/private buster-staging/main armhf libsensors4 armhf 1:3.4.0-4 [50.5 kB]
Get:158 http://172.17.0.1/private buster-staging/main armhf libgl1-mesa-dri armhf 17.3.8-1 [4211 kB]
Get:159 http://172.17.0.1/private buster-staging/main armhf libglx-mesa0 armhf 17.3.8-1 [156 kB]
Get:160 http://172.17.0.1/private buster-staging/main armhf libglx0 armhf 1.0.0-2 [24.2 kB]
Get:161 http://172.17.0.1/private buster-staging/main armhf libgl1 armhf 1.0.0-2 [106 kB]
Get:162 http://172.17.0.1/private buster-staging/main armhf libgl1-mesa-glx armhf 17.3.8-1 [42.8 kB]
Get:163 http://172.17.0.1/private buster-staging/main armhf libgtk2.0-common all 2.24.32-1 [2698 kB]
Get:164 http://172.17.0.1/private buster-staging/main armhf libgtk2.0-0 armhf 2.24.32-1 [1497 kB]
Get:165 http://172.17.0.1/private buster-staging/main armhf libfontenc1 armhf 1:1.1.3-1 [22.2 kB]
Get:166 http://172.17.0.1/private buster-staging/main armhf libice6 armhf 2:1.0.9-2 [51.6 kB]
Get:167 http://172.17.0.1/private buster-staging/main armhf libsm6 armhf 2:1.2.2-1+b3 [31.2 kB]
Get:168 http://172.17.0.1/private buster-staging/main armhf libxt6 armhf 1:1.1.5-1 [155 kB]
Get:169 http://172.17.0.1/private buster-staging/main armhf libxmu6 armhf 2:1.1.2-2 [52.0 kB]
Get:170 http://172.17.0.1/private buster-staging/main armhf libxpm4 armhf 1:3.5.12-1 [43.6 kB]
Get:171 http://172.17.0.1/private buster-staging/main armhf libxaw7 armhf 2:1.0.13-1 [164 kB]
Get:172 http://172.17.0.1/private buster-staging/main armhf libxcb-shape0 armhf 1.13-1 [98.5 kB]
Get:173 http://172.17.0.1/private buster-staging/main armhf libxft2 armhf 2.3.2-1+b2 [49.3 kB]
Get:174 http://172.17.0.1/private buster-staging/main armhf libxmuu1 armhf 2:1.1.2-2 [23.0 kB]
Get:175 http://172.17.0.1/private buster-staging/main armhf libxv1 armhf 2:1.0.11-1 [23.2 kB]
Get:176 http://172.17.0.1/private buster-staging/main armhf x11-utils armhf 7.7+4 [176 kB]
Get:177 http://172.17.0.1/private buster-staging/main armhf libatk-wrapper-java all 0.33.3-20 [45.3 kB]
Get:178 http://172.17.0.1/private buster-staging/main armhf libatk-wrapper-java-jni armhf 0.33.3-20 [33.6 kB]
Get:179 http://172.17.0.1/private buster-staging/main armhf libasound2-data all 1.1.3-5 [173 kB]
Get:180 http://172.17.0.1/private buster-staging/main armhf libasound2 armhf 1.1.3-5 [442 kB]
Get:181 http://172.17.0.1/private buster-staging/main armhf libgif7 armhf 5.1.4-2 [40.9 kB]
Get:182 http://172.17.0.1/private buster-staging/main armhf openjdk-9-jre armhf 9.0.4+12-4 [46.1 kB]
Get:183 http://172.17.0.1/private buster-staging/main armhf default-jre armhf 2:1.9-63 [1008 B]
Get:184 http://172.17.0.1/private buster-staging/main armhf openjdk-9-jdk-headless armhf 9.0.4+12-4 [71.1 MB]
Get:185 http://172.17.0.1/private buster-staging/main armhf default-jdk-headless armhf 2:1.9-63 [1080 B]
Get:186 http://172.17.0.1/private buster-staging/main armhf openjdk-9-jdk armhf 9.0.4+12-4 [85.9 kB]
Get:187 http://172.17.0.1/private buster-staging/main armhf default-jdk armhf 2:1.9-63 [1008 B]
Get:188 http://172.17.0.1/private buster-staging/main armhf libfile-which-perl all 1.21-1 [14.3 kB]
Get:189 http://172.17.0.1/private buster-staging/main armhf libfile-homedir-perl all 1.002-1 [42.3 kB]
Get:190 http://172.17.0.1/private buster-staging/main armhf devscripts armhf 2.18.1 [978 kB]
Get:191 http://172.17.0.1/private buster-staging/main armhf dh-linktree all 0.6 [10.7 kB]
Get:192 http://172.17.0.1/private buster-staging/main armhf libllvm6.0 armhf 1:6.0-1+rpi1 [12.5 MB]
Get:193 http://172.17.0.1/private buster-staging/main armhf libclang1-6.0 armhf 1:6.0-1+rpi1 [5732 kB]
Get:194 http://172.17.0.1/private buster-staging/main armhf libxapian30 armhf 1.4.5-1 [940 kB]
Get:195 http://172.17.0.1/private buster-staging/main armhf doxygen armhf 1.8.13-10 [3257 kB]
Get:196 http://172.17.0.1/private buster-staging/main armhf libann0 armhf 1.1.2+doc-7 [22.6 kB]
Get:197 http://172.17.0.1/private buster-staging/main armhf libcdt5 armhf 2.40.1-2 [58.0 kB]
Get:198 http://172.17.0.1/private buster-staging/main armhf libcgraph6 armhf 2.40.1-2 [77.2 kB]
Get:199 http://172.17.0.1/private buster-staging/main armhf libwebp6 armhf 0.6.1-2 [228 kB]
Get:200 http://172.17.0.1/private buster-staging/main armhf libgd3 armhf 2.2.5-4 [114 kB]
Get:201 http://172.17.0.1/private buster-staging/main armhf libgts-0.7-5 armhf 0.7.6+darcs121130-4 [134 kB]
Get:202 http://172.17.0.1/private buster-staging/main armhf libltdl7 armhf 2.4.6-2 [386 kB]
Get:203 http://172.17.0.1/private buster-staging/main armhf libpathplan4 armhf 2.40.1-2 [61.1 kB]
Get:204 http://172.17.0.1/private buster-staging/main armhf libxdot4 armhf 2.40.1-2 [55.5 kB]
Get:205 http://172.17.0.1/private buster-staging/main armhf libgvc6 armhf 2.40.1-2 [544 kB]
Get:206 http://172.17.0.1/private buster-staging/main armhf libgvpr2 armhf 2.40.1-2 [188 kB]
Get:207 http://172.17.0.1/private buster-staging/main armhf liblab-gamut1 armhf 2.40.1-2 [220 kB]
Get:208 http://172.17.0.1/private buster-staging/main armhf graphviz armhf 2.40.1-2 [524 kB]
Get:209 http://172.17.0.1/private buster-staging/main armhf javahelper all 0.63 [85.2 kB]
Get:210 http://172.17.0.1/private buster-staging/main armhf libjs-jquery all 3.2.1-1 [154 kB]
Get:211 http://172.17.0.1/private buster-staging/main armhf opencl-c-headers all 2.2~2018.02.21-gb5c3680-1 [29.8 kB]
Get:212 http://172.17.0.1/private buster-staging/main armhf ocl-icd-opencl-dev armhf 2.2.12-1 [10.3 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 213 MB in 22s (9737 kB/s)
Selecting previously unselected package libbsd0:armhf.
(Reading database ... 15494 files and directories currently installed.)
Preparing to unpack .../00-libbsd0_0.8.7-1_armhf.deb ...
Unpacking libbsd0:armhf (0.8.7-1) ...
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Unpacking bsdmainutils (11.1.2) ...
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Preparing to unpack .../02-groff-base_1.22.3-10_armhf.deb ...
Unpacking groff-base (1.22.3-10) ...
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Unpacking libpipeline1:armhf (1.5.0-1) ...
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Preparing to unpack .../04-man-db_2.8.3-2_armhf.deb ...
Unpacking man-db (2.8.3-2) ...
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Preparing to unpack .../05-libexpat1_2.2.5-3_armhf.deb ...
Unpacking libexpat1:armhf (2.2.5-3) ...
Selecting previously unselected package libfreetype6:armhf.
Preparing to unpack .../06-libfreetype6_2.8.1-2_armhf.deb ...
Unpacking libfreetype6:armhf (2.8.1-2) ...
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Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up ocl-icd-libopencl1:armhf (2.2.12-1) ...
Setting up dbus (1.12.6-2) ...
invoke-rc.d: could not determine current runlevel
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
Setting up libkeyutils1:armhf (1.5.9-9.2) ...
Setting up libdrm-nouveau2:armhf (2.4.91-2+rpi1) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up x11-common (1:7.7+19) ...
update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
invoke-rc.d: could not determine current runlevel
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
Processing triggers for ca-certificates (20170717) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Setting up hicolor-icon-theme (0.17-2) ...
Setting up libnih1 (1.0.3-10+b9) ...
Setting up libcdt5 (2.40.1-2) ...
Setting up libx11-data (2:1.6.5-1) ...
Setting up libxau6:armhf (1:1.0.8-1+b2) ...
Setting up autopoint (0.19.8.1-6) ...
Setting up libmpdec2:armhf (2.4.2-1) ...
Setting up libnih-dbus1 (1.0.3-10+b9) ...
Setting up libavahi-common-data:armhf (0.7-3.1+b1) ...
Setting up libcgraph6 (2.40.1-2) ...
Setting up libwebp6:armhf (0.6.1-2) ...
Setting up libfile-stripnondeterminism-perl (0.040-1) ...
Setting up libcgmanager0:armhf (0.41-2) ...
Setting up libedit2:armhf (3.1-20170329-1) ...
Setting up libpython3.6-stdlib:armhf (3.6.5~rc1-1) ...
Setting up libgts-0.7-5:armhf (0.7.6+darcs121130-4) ...
Setting up fontconfig-config (2.12.6-0.1) ...
Setting up libllvm6.0:armhf (1:6.0-1+rpi1) ...
Setting up gettext (0.19.8.1-6) ...
Setting up libgvpr2 (2.40.1-2) ...
Setting up ocl-icd-opencl-dev:armhf (2.2.12-1) ...
Setting up libclang1-6.0:armhf (1:6.0-1+rpi1) ...
Setting up libnss3:armhf (2:3.35-2) ...
Setting up libllvm5.0:armhf (1:5.0.1-4+rpi1) ...
Setting up libharfbuzz0b:armhf (1.7.2-1) ...
Setting up autoconf (2.69-11) ...
Setting up libthai0:armhf (0.1.27-2) ...
Setting up file (1:5.32-2) ...
Setting up clinfo (2.2.18.03.26-1) ...
Setting up libkrb5support0:armhf (1.16-2) ...
Setting up cgmanager (0.41-2) ...
Created symlink /etc/systemd/system/multi-user.target.wants/cgmanager.service -> /lib/systemd/system/cgmanager.service.
Created symlink /etc/systemd/system/multi-user.target.wants/cgproxy.service -> /lib/systemd/system/cgproxy.service.
invoke-rc.d: could not determine current runlevel
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
invoke-rc.d: could not determine current runlevel
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up automake (1:1.15.1-3.1) ...
update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode
Setting up libice6:armhf (2:1.0.9-2) ...
Setting up man-db (2.8.3-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libavahi-common3:armhf (0.7-3.1+b1) ...
Setting up libxcb1:armhf (1.13-1) ...
Setting up systemd-shim (10-3+b6) ...
Setting up libtool (2.4.6-2) ...
Setting up libpython3-stdlib:armhf (3.6.4-1) ...
Setting up libxcb-present0:armhf (1.13-1) ...
Setting up libfontconfig1:armhf (2.12.6-0.1) ...
Setting up libxcb-dri2-0:armhf (1.13-1) ...
Setting up libsm6:armhf (2:1.2.2-1+b3) ...
Setting up libxcb-dri3-0:armhf (1.13-1) ...
Setting up libk5crypto3:armhf (1.16-2) ...
Setting up libxcb-glx0:armhf (1.13-1) ...
Setting up libxcb-xfixes0:armhf (1.13-1) ...
Setting up libxcb-render0:armhf (1.13-1) ...
Setting up libpam-systemd:armhf (238-4) ...
Setting up po-debconf (1.0.20) ...
Setting up libx11-6:armhf (2:1.6.5-1) ...
Setting up libgl1-mesa-dri:armhf (17.3.8-1) ...
Setting up doxygen (1.8.13-10) ...
Setting up libxmuu1:armhf (2:1.1.2-2) ...
Setting up dbus-user-session (1.12.6-2) ...
Setting up libxcb-sync1:armhf (1.13-1) ...
Setting up libxcomposite1:armhf (1:0.4.4-2) ...
Setting up libxcb-shm0:armhf (1.13-1) ...
Setting up libxpm4:armhf (1:3.5.12-1) ...
Setting up libxt6:armhf (1:1.1.5-1) ...
Setting up libxcb-shape0:armhf (1.13-1) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up libavahi-client3:armhf (0.7-3.1+b1) ...
Setting up libkrb5-3:armhf (1.16-2) ...
Setting up libxft2:armhf (2.3.2-1+b2) ...
Setting up fontconfig (2.12.6-0.1) ...
Regenerating fonts cache... done.
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up libxfixes3:armhf (1:5.0.3-1) ...
Setting up dconf-service (0.28.0-2) ...
Setting up libatspi2.0-0:armhf (2.28.0-1) ...
Setting up libgdk-pixbuf2.0-0:armhf (2.36.11-2) ...
Setting up libgd3:armhf (2.2.5-4) ...
Setting up libxmu6:armhf (2:1.1.2-2) ...
Setting up libgssapi-krb5-2:armhf (1.16-2) ...
Setting up gtk-update-icon-cache (3.22.29-3+rpi1) ...
Setting up libxcursor1:armhf (1:1.1.15-1) ...
Setting up libxxf86dga1:armhf (2:1.1.4-1) ...
Setting up libpango-1.0-0:armhf (1.42.0-1) ...
Setting up libatk-bridge2.0-0:armhf (2.26.2-1) ...
Setting up libxv1:armhf (2:1.0.11-1) ...
Setting up libxxf86vm1:armhf (1:1.1.4-1+b2) ...
Setting up dconf-gsettings-backend:armhf (0.28.0-2) ...
Setting up libxrandr2:armhf (2:1.5.1-1) ...
Setting up libcups2:armhf (2.2.7-2) ...
Setting up libxi6:armhf (2:1.7.9-1) ...
Setting up libxaw7:armhf (2:1.0.13-1) ...
Setting up libcairo2:armhf (1.15.10-1) ...
Setting up libxinerama1:armhf (2:1.1.3-1+b3) ...
Setting up libxdamage1:armhf (1:1.1.4-3) ...
Setting up gsettings-desktop-schemas (3.28.0-1) ...
Setting up libgtk-3-common (3.22.29-3+rpi1) ...
Setting up libcairo-gobject2:armhf (1.15.10-1) ...
Setting up libxtst6:armhf (2:1.2.3-1) ...
Setting up libpangoft2-1.0-0:armhf (1.42.0-1) ...
Setting up glib-networking:armhf (2.56.0-1) ...
Setting up libglx-mesa0:armhf (17.3.8-1) ...
Setting up libsoup2.4-1:armhf (2.62.0-1) ...
Setting up libsoup-gnome2.4-1:armhf (2.62.0-1) ...
Setting up libpangocairo-1.0-0:armhf (1.42.0-1) ...
Setting up librest-0.7-0:armhf (0.8.0-2) ...
Setting up libglx0:armhf (1.0.0-2) ...
Setting up libgvc6 (2.40.1-2) ...
Setting up librsvg2-2:armhf (2.40.20-2) ...
Setting up librsvg2-common:armhf (2.40.20-2) ...
Setting up libgl1:armhf (1.0.0-2) ...
Setting up adwaita-icon-theme (3.28.0-1) ...
update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode
Setting up graphviz (2.40.1-2) ...
Setting up libgtk2.0-0:armhf (2.24.32-1) ...
Setting up x11-utils (7.7+4) ...
Setting up libgtk-3-0:armhf (3.22.29-3+rpi1) ...
Setting up libgl1-mesa-glx:armhf (17.3.8-1) ...
Setting up libatk-wrapper-java (0.33.3-20) ...
Setting up libatk-wrapper-java-jni:armhf (0.33.3-20) ...
Setting up dh-python (3.20180326) ...
Setting up default-jre-headless (2:1.9-63) ...
Setting up openjdk-9-jre-headless:armhf (9.0.4+12-4) ...
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/rmid to provide /usr/bin/rmid (rmid) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/java to provide /usr/bin/java (java) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/jjs to provide /usr/bin/jjs (jjs) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/pack200 to provide /usr/bin/pack200 (pack200) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/unpack200 to provide /usr/bin/unpack200 (unpack200) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/orbd to provide /usr/bin/orbd (orbd) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/servertool to provide /usr/bin/servertool (servertool) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/tnameserv to provide /usr/bin/tnameserv (tnameserv) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode
Setting up ca-certificates-java (20170930) ...
Adding debian:ACCVRAIZ1.pem
Adding debian:ACEDICOM_Root.pem
Adding debian:Actalis_Authentication_Root_CA.pem
Adding debian:AddTrust_External_Root.pem
Adding debian:AddTrust_Low-Value_Services_Root.pem
Adding debian:AddTrust_Public_Services_Root.pem
Adding debian:AddTrust_Qualified_Certificates_Root.pem
Adding debian:AffirmTrust_Commercial.pem
Adding debian:AffirmTrust_Networking.pem
Adding debian:AffirmTrust_Premium.pem
Adding debian:AffirmTrust_Premium_ECC.pem
Adding debian:Atos_TrustedRoot_2011.pem
Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem
Adding debian:Baltimore_CyberTrust_Root.pem
Adding debian:Buypass_Class_2_Root_CA.pem
Adding debian:Buypass_Class_3_Root_CA.pem
Adding debian:CA_Disig_Root_R1.pem
Adding debian:CA_Disig_Root_R2.pem
Adding debian:CFCA_EV_ROOT.pem
Adding debian:CNNIC_ROOT.pem
Adding debian:COMODO_Certification_Authority.pem
Adding debian:COMODO_ECC_Certification_Authority.pem
Adding debian:COMODO_RSA_Certification_Authority.pem
Adding debian:Camerfirma_Chambers_of_Commerce_Root.pem
Adding debian:Camerfirma_Global_Chambersign_Root.pem
Adding debian:Certigna.pem
Adding debian:Certinomis_-_Autorité_Racine.pem
Adding debian:Certinomis_-_Root_CA.pem
Adding debian:Certplus_Class_2_Primary_CA.pem
Adding debian:Certplus_Root_CA_G1.pem
Adding debian:Certplus_Root_CA_G2.pem
Adding debian:Certum_Root_CA.pem
Adding debian:Certum_Trusted_Network_CA.pem
Adding debian:Certum_Trusted_Network_CA_2.pem
Adding debian:Chambers_of_Commerce_Root_-_2008.pem
Adding debian:China_Internet_Network_Information_Center_EV_Certificates_Root.pem
Adding debian:Comodo_AAA_Services_root.pem
Adding debian:Comodo_Secure_Services_root.pem
Adding debian:Comodo_Trusted_Services_root.pem
Adding debian:Cybertrust_Global_Root.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem
Adding debian:DST_ACES_CA_X6.pem
Adding debian:DST_Root_CA_X3.pem
Adding debian:Deutsche_Telekom_Root_CA_2.pem
Adding debian:DigiCert_Assured_ID_Root_CA.pem
Adding debian:DigiCert_Assured_ID_Root_G2.pem
Adding debian:DigiCert_Assured_ID_Root_G3.pem
Adding debian:DigiCert_Global_Root_CA.pem
Adding debian:DigiCert_Global_Root_G2.pem
Adding debian:DigiCert_Global_Root_G3.pem
Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem
Adding debian:DigiCert_Trusted_Root_G4.pem
Adding debian:E-Tugra_Certification_Authority.pem
Adding debian:EC-ACC.pem
Adding debian:EE_Certification_Centre_Root_CA.pem
Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem
Adding debian:Entrust_Root_Certification_Authority.pem
Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem
Adding debian:Entrust_Root_Certification_Authority_-_G2.pem
Adding debian:GeoTrust_Global_CA.pem
Adding debian:GeoTrust_Global_CA_2.pem
Adding debian:GeoTrust_Primary_Certification_Authority.pem
Adding debian:GeoTrust_Primary_Certification_Authority_-_G2.pem
Adding debian:GeoTrust_Primary_Certification_Authority_-_G3.pem
Adding debian:GeoTrust_Universal_CA.pem
Adding debian:GeoTrust_Universal_CA_2.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem
Adding debian:GlobalSign_Root_CA.pem
Adding debian:GlobalSign_Root_CA_-_R2.pem
Adding debian:GlobalSign_Root_CA_-_R3.pem
Adding debian:Global_Chambersign_Root_-_2008.pem
Adding debian:Go_Daddy_Class_2_CA.pem
Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2011.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem
Adding debian:Hongkong_Post_Root_CA_1.pem
Adding debian:ISRG_Root_X1.pem
Adding debian:IdenTrust_Commercial_Root_CA_1.pem
Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem
Adding debian:Izenpe.com.pem
Adding debian:Microsec_e-Szigno_Root_CA_2009.pem
Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem
Adding debian:Network_Solutions_Certificate_Authority.pem
Adding debian:OISTE_WISeKey_Global_Root_GA_CA.pem
Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem
Adding debian:OpenTrust_Root_CA_G1.pem
Adding debian:OpenTrust_Root_CA_G2.pem
Adding debian:OpenTrust_Root_CA_G3.pem
Adding debian:PSCProcert.pem
Adding debian:QuoVadis_Root_CA.pem
Adding debian:QuoVadis_Root_CA_1_G3.pem
Adding debian:QuoVadis_Root_CA_2.pem
Adding debian:QuoVadis_Root_CA_2_G3.pem
Adding debian:QuoVadis_Root_CA_3.pem
Adding debian:QuoVadis_Root_CA_3_G3.pem
Adding debian:SZAFIR_ROOT_CA2.pem
Adding debian:SecureSign_RootCA11.pem
Adding debian:SecureTrust_CA.pem
Adding debian:Secure_Global_CA.pem
Adding debian:Security_Communication_EV_RootCA1.pem
Adding debian:Security_Communication_RootCA2.pem
Adding debian:Security_Communication_Root_CA.pem
Adding debian:Sonera_Class_2_Root_CA.pem
Adding debian:Staat_der_Nederlanden_EV_Root_CA.pem
Adding debian:Staat_der_Nederlanden_Root_CA_-_G2.pem
Adding debian:Staat_der_Nederlanden_Root_CA_-_G3.pem
Adding debian:Starfield_Class_2_CA.pem
Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem
Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem
Adding debian:SwissSign_Gold_CA_-_G2.pem
Adding debian:SwissSign_Silver_CA_-_G2.pem
Adding debian:Swisscom_Root_CA_1.pem
Adding debian:Swisscom_Root_CA_2.pem
Adding debian:Swisscom_Root_EV_CA_2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_3.pem
Adding debian:TURKTRUST_Certificate_Services_Provider_Root_2007.pem
Adding debian:TWCA_Global_Root_CA.pem
Adding debian:TWCA_Root_Certification_Authority.pem
Adding debian:Taiwan_GRCA.pem
Adding debian:TeliaSonera_Root_CA_v1.pem
Adding debian:Trustis_FPS_Root_CA.pem
Adding debian:TÜBİTAK_UEKAE_Kök_Sertifika_Hizmet_Sağlayıcısı_-_Sürüm_3.pem
Adding debian:TÜRKTRUST_Elektronik_Sertifika_Hizmet_Sağlayıcısı_H5.pem
Adding debian:USERTrust_ECC_Certification_Authority.pem
Adding debian:USERTrust_RSA_Certification_Authority.pem
Adding debian:UTN_USERFirst_Hardware_Root_CA.pem
Adding debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G4.pem
Adding debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G5.pem
Adding debian:VeriSign_Universal_Root_Certification_Authority.pem
Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority_-_G3.pem
Adding debian:Visa_eCommerce_Root.pem
Adding debian:XRamp_Global_CA_Root.pem
Adding debian:certSIGN_ROOT_CA.pem
Adding debian:ePKI_Root_Certification_Authority.pem
Adding debian:thawte_Primary_Root_CA.pem
Adding debian:thawte_Primary_Root_CA_-_G2.pem
Adding debian:thawte_Primary_Root_CA_-_G3.pem
Adding debian:AC_RAIZ_FNMT-RCM.pem
Adding debian:Amazon_Root_CA_1.pem
Adding debian:Amazon_Root_CA_2.pem
Adding debian:Amazon_Root_CA_3.pem
Adding debian:Amazon_Root_CA_4.pem
Adding debian:LuxTrust_Global_Root_2.pem
Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem
done.
Setting up dh-autoreconf (17) ...
Setting up openjdk-9-jdk-headless:armhf (9.0.4+12-4) ...
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/idlj to provide /usr/bin/idlj (idlj) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/wsimport to provide /usr/bin/wsimport (wsimport) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/javac to provide /usr/bin/javac (javac) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/javah to provide /usr/bin/javah (javah) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/javap to provide /usr/bin/javap (javap) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/jar to provide /usr/bin/jar (jar) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/policytool to provide /usr/bin/policytool (policytool) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/schemagen to provide /usr/bin/schemagen (schemagen) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/jps to provide /usr/bin/jps (jps) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/xjc to provide /usr/bin/xjc (xjc) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/rmic to provide /usr/bin/rmic (rmic) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/wsgen to provide /usr/bin/wsgen (wsgen) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode
Setting up python3 (3.6.4-1) ...
Setting up devscripts (2.18.1) ...
Setting up dh-strip-nondeterminism (0.040-1) ...
Setting up ant (1.10.3-1) ...
Setting up openjdk-9-jre:armhf (9.0.4+12-4) ...
Setting up python3-lib2to3 (3.6.5~rc1-1) ...
Setting up python3-distutils (3.6.5~rc1-1) ...
Setting up default-jdk-headless (2:1.9-63) ...
Setting up debhelper (11.2.1) ...
Setting up dh-linktree (0.6) ...
Setting up python3.6 (3.6.5~rc1-1) ...
Setting up default-jre (2:1.9-63) ...
Setting up openjdk-9-jdk:armhf (9.0.4+12-4) ...
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/appletviewer to provide /usr/bin/appletviewer (appletviewer) in auto mode
update-alternatives: using /usr/lib/jvm/java-9-openjdk-armhf/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode
Setting up javahelper (0.63) ...
Setting up default-jdk (2:1.9-63) ...
Setting up sbuild-build-depends-libhmsbeagle-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.27-3+rpi1) ...
Processing triggers for systemd (238-4) ...
Processing triggers for libgdk-pixbuf2.0-0:armhf (2.36.11-2) ...
Processing triggers for ca-certificates (20170717) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
done.
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.1-armmp armhf (armv7l)
Toolchain package versions: binutils_2.30-8+rpi1 dpkg-dev_1.19.0.5 g++-7_7.3.0-12 gcc-7_7.3.0-12 libc6-dev_2.27-3+rpi1 libstdc++-7-dev_7.3.0-12 libstdc++6_8-20180402-1+rpi1 linux-libc-dev_4.15.11-1+rpi1
Package versions: adduser_3.117 adwaita-icon-theme_3.28.0-1 ant_1.10.3-1 apt_1.6~beta1 autoconf_2.69-11 automake_1:1.15.1-3.1 autopoint_0.19.8.1-6 autotools-dev_20180224.1 base-files_10.1+rpi1 base-passwd_3.5.44 bash_4.4.18-2 binutils_2.30-8+rpi1 binutils-arm-linux-gnueabihf_2.30-8+rpi1 binutils-common_2.30-8+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.31.1-0.5 build-essential_12.4 bzip2_1.0.6-8.1 ca-certificates_20170717 ca-certificates-java_20170930 cgmanager_0.41-2 clinfo_2.2.18.03.26-1 coreutils_8.28-1 cpio_2.12+dfsg-6 cpp_4:7.2.0-1d1 cpp-7_7.3.0-12 dash_0.5.8-2.10 dbus_1.12.6-2 dbus-user-session_1.12.6-2 dconf-gsettings-backend_0.28.0-2 dconf-service_0.28.0-2 dctrl-tools_2.24-2 debconf_1.5.66 debhelper_11.2.1 debianutils_4.8.4 default-jdk_2:1.9-63 default-jdk-headless_2:1.9-63 default-jre_2:1.9-63 default-jre-headless_2:1.9-63 devscripts_2.18.1 dh-autoreconf_17 dh-linktree_0.6 dh-python_3.20180326 dh-strip-nondeterminism_0.040-1 diffutils_1:3.6-1 dirmngr_2.2.5-1 dmsetup_2:1.02.145-4.1 doxygen_1.8.13-10 dpkg_1.19.0.5 dpkg-dev_1.19.0.5 e2fslibs_1.44.1-1 e2fsprogs_1.44.1-1 e2fsprogs-l10n_1.44.1-1 fakeroot_1.22-2 fdisk_2.31.1-0.5 file_1:5.32-2 findutils_4.6.0+git+20171230-2 fontconfig_2.12.6-0.1 fontconfig-config_2.12.6-0.1 fonts-dejavu-core_2.37-1 g++_4:7.2.0-1d1 g++-7_7.3.0-12 gcc_4:7.2.0-1d1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.4-2+rpi1 gcc-5-base_5.5.0-8 gcc-7_7.3.0-12 gcc-7-base_7.3.0-12 gcc-8-base_8-20180402-1+rpi1 gettext_0.19.8.1-6 gettext-base_0.19.8.1-6 glib-networking_2.56.0-1 glib-networking-common_2.56.0-1 glib-networking-services_2.56.0-1 gnupg_2.2.5-1 gnupg-agent_2.2.5-1 gnupg-l10n_2.2.5-1 gnupg-utils_2.2.5-1 gpg_2.2.5-1 gpg-agent_2.2.5-1 gpg-wks-client_2.2.5-1 gpg-wks-server_2.2.5-1 gpgconf_2.2.5-1 gpgsm_2.2.5-1 gpgv_2.2.5-1 graphviz_2.40.1-2 grep_3.1-2 groff-base_1.22.3-10 gsettings-desktop-schemas_3.28.0-1 gtk-update-icon-cache_3.22.29-3+rpi1 gzip_1.6-5 hicolor-icon-theme_0.17-2 hostname_3.20 inetutils-ping_2:1.9.4-3 init-system-helpers_1.51 initramfs-tools_0.130 initramfs-tools-core_0.130 intltool-debian_0.35.0+20060710.4 java-common_0.63 javahelper_0.63 klibc-utils_2.0.4-11+rpi1 kmod_25-1 libacl1_2.2.52-3 libann0_1.1.2+doc-7 libapparmor1_2.12-4 libapt-pkg5.0_1.6~beta1 libarchive-zip-perl_1.60-1 libargon2-0_0~20161029-1.1 libasan4_7.3.0-12 libasound2_1.1.3-5 libasound2-data_1.1.3-5 libassuan0_2.5.1-2 libatk-bridge2.0-0_2.26.2-1 libatk-wrapper-java_0.33.3-20 libatk-wrapper-java-jni_0.33.3-20 libatk1.0-0_2.28.1-1 libatk1.0-data_2.28.1-1 libatomic1_8-20180402-1+rpi1 libatspi2.0-0_2.28.0-1 libattr1_1:2.4.47-2 libaudit-common_1:2.8.2-1 libaudit1_1:2.8.2-1 libavahi-client3_0.7-3.1+b1 libavahi-common-data_0.7-3.1+b1 libavahi-common3_0.7-3.1+b1 libbinutils_2.30-8+rpi1 libblkid1_2.31.1-0.5 libbsd0_0.8.7-1 libbz2-1.0_1.0.6-8.1 libc-bin_2.27-3+rpi1 libc-dev-bin_2.27-3+rpi1 libc6_2.27-3+rpi1 libc6-dev_2.27-3+rpi1 libcairo-gobject2_1.15.10-1 libcairo2_1.15.10-1 libcap-ng0_0.7.7-3.1+b1 libcap2_1:2.25-1.2 libcc1-0_8-20180402-1+rpi1 libcdt5_2.40.1-2 libcgmanager0_0.41-2 libcgraph6_2.40.1-2 libcilkrts5_7.3.0-12 libclang1-6.0_1:6.0-1+rpi1 libcolord2_1.3.3-2 libcom-err2_1.44.1-1 libcroco3_0.6.12-2 libcryptsetup12_2:2.0.2-1 libcryptsetup4_2:1.7.5-1 libcups2_2.2.7-2 libdatrie1_0.2.10-7 libdb5.3_5.3.28-13.1 libdbus-1-3_1.12.6-2 libdconf1_0.28.0-2 libdebconfclient0_0.243 libdevmapper1.02.1_2:1.02.145-4.1 libdpkg-perl_1.19.0.5 libdrm-amdgpu1_2.4.91-2+rpi1 libdrm-common_2.4.91-2+rpi1 libdrm-etnaviv1_2.4.91-2+rpi1 libdrm-freedreno1_2.4.91-2+rpi1 libdrm-nouveau2_2.4.91-2+rpi1 libdrm-radeon1_2.4.91-2+rpi1 libdrm2_2.4.91-2+rpi1 libedit2_3.1-20170329-1 libelf1_0.170-0.4 libepoxy0_1.4.3-1 libexpat1_2.2.5-3 libext2fs2_1.44.1-1 libfakeroot_1.22-2 libfdisk1_2.31.1-0.5 libffi6_3.2.1-8 libfile-homedir-perl_1.002-1 libfile-stripnondeterminism-perl_0.040-1 libfile-which-perl_1.21-1 libfontconfig1_2.12.6-0.1 libfontenc1_1:1.1.3-1 libfreetype6_2.8.1-2 libfribidi0_0.19.7-2 libgcc-7-dev_7.3.0-12 libgcc1_1:8-20180402-1+rpi1 libgcrypt20_1.8.2-2 libgd3_2.2.5-4 libgdbm-compat4_1.14.1-6 libgdbm3_1.8.3-14 libgdbm5_1.14.1-6 libgdk-pixbuf2.0-0_2.36.11-2 libgdk-pixbuf2.0-common_2.36.11-2 libgif7_5.1.4-2 libgl1_1.0.0-2 libgl1-mesa-dri_17.3.8-1 libgl1-mesa-glx_17.3.8-1 libglapi-mesa_17.3.8-1 libglib2.0-0_2.56.0-4 libglvnd0_1.0.0-2 libglx-mesa0_17.3.8-1 libglx0_1.0.0-2 libgmp10_2:6.1.2+dfsg-3 libgnutls30_3.5.18-1 libgomp1_8-20180402-1+rpi1 libgpg-error0_1.28-2 libgraphite2-3_1.3.11-2 libgssapi-krb5-2_1.16-2 libgtk-3-0_3.22.29-3+rpi1 libgtk-3-common_3.22.29-3+rpi1 libgtk2.0-0_2.24.32-1 libgtk2.0-common_2.24.32-1 libgts-0.7-5_0.7.6+darcs121130-4 libgvc6_2.40.1-2 libgvpr2_2.40.1-2 libharfbuzz0b_1.7.2-1 libhogweed4_3.4-1 libice6_2:1.0.9-2 libicu57_57.1-9 libidn11_1.33-2.1 libidn2-0_2.0.4-1.1 libip4tc0_1.6.2-1 libisl15_0.18-4 libjbig0_2.1-3.1+b2 libjpeg62-turbo_1:1.5.2-2+b1 libjs-jquery_3.2.1-1 libjson-c3_0.12.1-1.3 libjson-glib-1.0-0_1.4.2-3 libjson-glib-1.0-common_1.4.2-3 libk5crypto3_1.16-2 libkeyutils1_1.5.9-9.2 libklibc_2.0.4-11+rpi1 libkmod2_25-1 libkrb5-3_1.16-2 libkrb5support0_1.16-2 libksba8_1.3.5-2 liblab-gamut1_2.40.1-2 liblcms2-2_2.9-1 libldap-2.4-2_2.4.45+dfsg-1 libldap-common_2.4.45+dfsg-1 libllvm5.0_1:5.0.1-4+rpi1 libllvm6.0_1:6.0-1+rpi1 libltdl7_2.4.6-2 liblz4-1_0.0~r131-2 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.32-2 libmagic1_1:5.32-2 libmount1_2.31.1-0.5 libmpc3_1.1.0-1 libmpdec2_2.4.2-1 libmpfr6_4.0.1-1 libncurses5_6.1-1 libncursesw5_6.1-1 libnettle6_3.4-1 libnih-dbus1_1.0.3-10+b9 libnih1_1.0.3-10+b9 libnpth0_1.5-3 libnspr4_2:4.19-1 libnss3_2:3.35-2 libp11-kit0_0.23.10-2 libpam-modules_1.1.8-3.7 libpam-modules-bin_1.1.8-3.7 libpam-runtime_1.1.8-3.7 libpam-systemd_238-4 libpam0g_1.1.8-3.7 libpango-1.0-0_1.42.0-1 libpangocairo-1.0-0_1.42.0-1 libpangoft2-1.0-0_1.42.0-1 libpathplan4_2.40.1-2 libpcre3_2:8.39-9 libpcsclite1_1.8.23-2 libperl5.24_5.24.1-7 libperl5.26_5.26.1-5 libpipeline1_1.5.0-1 libpixman-1-0_0.34.0-2 libplymouth4_0.9.3-2 libpng16-16_1.6.34-1 libprocps6_2:3.3.12-4 libproxy1v5_0.4.15-1 libpython3-stdlib_3.6.4-1 libpython3.6-minimal_3.6.5~rc1-1 libpython3.6-stdlib_3.6.5~rc1-1 libreadline7_7.0-3 librest-0.7-0_0.8.0-2 librsvg2-2_2.40.20-2 librsvg2-common_2.40.20-2 libsasl2-2_2.1.27~101-g0780600+dfsg-3 libsasl2-modules_2.1.27~101-g0780600+dfsg-3 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3 libseccomp2_2.3.1-2.1 libselinux1_2.7-2 libsemanage-common_2.7-2 libsemanage1_2.7-2 libsensors4_1:3.4.0-4 libsepol1_2.7-1 libsigsegv2_2.12-1 libsm6_2:1.2.2-1+b3 libsmartcols1_2.31.1-0.5 libsoup-gnome2.4-1_2.62.0-1 libsoup2.4-1_2.62.0-1 libsqlite3-0_3.23.0-1 libss2_1.44.1-1 libssl1.1_1.1.0h-2 libstdc++-7-dev_7.3.0-12 libstdc++6_8-20180402-1+rpi1 libsystemd0_238-4 libtasn1-6_4.13-2 libthai-data_0.1.27-2 libthai0_0.1.27-2 libtiff5_4.0.9-4 libtimedate-perl_2.3000-2 libtinfo5_6.1-1 libtool_2.4.6-2 libubsan0_7.3.0-12 libudev1_238-4 libunistring2_0.9.8-1 libustr-1.0-1_1.0.4-6 libuuid1_2.31.1-0.5 libwebp6_0.6.1-2 libx11-6_2:1.6.5-1 libx11-data_2:1.6.5-1 libx11-xcb1_2:1.6.5-1 libxapian30_1.4.5-1 libxau6_1:1.0.8-1+b2 libxaw7_2:1.0.13-1 libxcb-dri2-0_1.13-1 libxcb-dri3-0_1.13-1 libxcb-glx0_1.13-1 libxcb-present0_1.13-1 libxcb-render0_1.13-1 libxcb-shape0_1.13-1 libxcb-shm0_1.13-1 libxcb-sync1_1.13-1 libxcb-xfixes0_1.13-1 libxcb1_1.13-1 libxcomposite1_1:0.4.4-2 libxcursor1_1:1.1.15-1 libxdamage1_1:1.1.4-3 libxdmcp6_1:1.1.2-3 libxdot4_2.40.1-2 libxext6_2:1.3.3-1+b2 libxfixes3_1:5.0.3-1 libxft2_2.3.2-1+b2 libxi6_2:1.7.9-1 libxinerama1_2:1.1.3-1+b3 libxml2_2.9.4+dfsg1-6.1 libxmu6_2:1.1.2-2 libxmuu1_2:1.1.2-2 libxpm4_1:3.5.12-1 libxrandr2_2:1.5.1-1 libxrender1_1:0.9.10-1 libxshmfence1_1.3-1 libxt6_1:1.1.5-1 libxtst6_2:1.2.3-1 libxv1_2:1.0.11-1 libxxf86dga1_2:1.1.4-1 libxxf86vm1_1:1.1.4-1+b2 linux-base_4.5 linux-libc-dev_4.15.11-1+rpi1 login_1:4.5-1 lsb-base_9.20170808+rpi1 m4_1.4.18-1 make_4.1-9.1 makedev_2.3.1-93 man-db_2.8.3-2 mawk_1.3.3-17 mime-support_3.60 mount_2.31.1-0.5 multiarch-support_2.27-3+rpi1 nano_2.9.5-1 ncurses-base_6.1-1 ncurses-bin_6.1-1 netbase_5.4 ocl-icd-libopencl1_2.2.12-1 ocl-icd-opencl-dev_2.2.12-1 opencl-c-headers_2.2~2018.02.21-gb5c3680-1 openjdk-9-jdk_9.0.4+12-4 openjdk-9-jdk-headless_9.0.4+12-4 openjdk-9-jre_9.0.4+12-4 openjdk-9-jre-headless_9.0.4+12-4 openssl_1.1.0h-2 passwd_1:4.5-1 patch_2.7.6-2 perl_5.26.1-5 perl-base_5.26.1-5 perl-modules-5.24_5.24.1-7 perl-modules-5.26_5.26.1-5 pinentry-curses_1.1.0-1 plymouth_0.9.3-2 po-debconf_1.0.20 procps_2:3.3.12-4 python3_3.6.4-1 python3-distutils_3.6.5~rc1-1 python3-lib2to3_3.6.5~rc1-1 python3-minimal_3.6.4-1 python3.6_3.6.5~rc1-1 python3.6-minimal_3.6.5~rc1-1 raspbian-archive-keyring_20120528.2 readline-common_7.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-libhmsbeagle-dummy_0.invalid.0 sed_4.4-2 sensible-utils_0.0.12 shared-mime-info_1.9-2 systemd_238-4 systemd-shim_10-3+b6 sysvinit-utils_2.88dsf-59.10 tar_1.29b-2 tzdata_2018d-1 ucf_3.0038 udev_238-4 util-linux_2.31.1-0.5 x11-common_1:7.7+19 x11-utils_7.7+4 xz-utils_5.2.2-1.3 zlib1g_1:1.2.8.dfsg-5
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Wed Apr 11 12:18:08 2018 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./libhmsbeagle_2.1.2+git20180307-1.dsc
dpkg-source: info: extracting libhmsbeagle in /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307
dpkg-source: info: unpacking libhmsbeagle_2.1.2+git20180307.orig.tar.xz
dpkg-source: info: unpacking libhmsbeagle_2.1.2+git20180307-1.debian.tar.xz
dpkg-source: info: applying enable_static.patch
dpkg-source: info: applying gcc-4.7.patch
dpkg-source: info: applying doxygen_update.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=root
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-d5b55702-bda9-4178-a705-2286b1647111
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=xterm
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package libhmsbeagle
dpkg-buildpackage: info: source version 2.1.2+git20180307-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build libhmsbeagle-2.1.2+git20180307
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean --with javahelper
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
/usr/bin/make -f Makefile distclean || true
make[2]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
make[2]: Makefile: No such file or directory
make[2]: *** No rule to make target 'Makefile'. Stop.
make[2]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
rm -rf doc .config configure
rm -rf lib build
make[1]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
jh_clean
rm -fr debian/.eclipse-build
rm -f debian/orbitdeps.debhelper
dh_clean
rm -f debian/debhelper-build-stamp
rm -rf debian/.debhelper/
rm -f -- debian/libhmsbeagle-dev.substvars debian/libhmsbeagle1v5.substvars debian/libhmsbeagle-java.substvars debian/files
rm -fr -- debian/libhmsbeagle-dev/ debian/tmp/ debian/libhmsbeagle1v5/ debian/libhmsbeagle-java/
find . \( \( \
\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \
\( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
-o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
-o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
-o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
\) -exec rm -f {} + \) -o \
\( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \)
debian/rules build-arch
dh build-arch --with javahelper
dh_update_autotools_config -a
dh_autoreconf -a
find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p
" > debian/autoreconf.before
autoreconf -f -i
libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, '.config'.
libtoolize: copying file '.config/ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
configure.ac:60: installing '.config/compile'
configure.ac:66: installing '.config/config.guess'
configure.ac:66: installing '.config/config.sub'
configure.ac:58: installing '.config/install-sh'
configure.ac:58: installing '.config/missing'
Makefile.am: installing './INSTALL'
examples/complextest/Makefile.am: installing '.config/depcomp'
parallel-tests: installing '.config/test-driver'
find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p
" > debian/autoreconf.after
debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
./autogen.sh
libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, '.config'.
libtoolize: copying file '.config/ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
configure.ac:60: installing '.config/compile'
configure.ac:58: installing '.config/missing'
examples/complextest/Makefile.am: installing '.config/depcomp'
dh_auto_configure -- --enable-doxygen-man --enable-march-native=no --enable-sse=no --with-opencl=/usr/include/CL
./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --libexecdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --enable-doxygen-man --enable-march-native=no --enable-sse=no --with-opencl=/usr/include/CL
configure: WARNING: unrecognized options: --disable-maintainer-mode
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking for style of include used by make... GNU
checking dependency style of gcc... none
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking dependency style of g++... none
checking whether ln -s works... yes
checking build system type... arm-unknown-linux-gnueabihf
checking host system type... arm-unknown-linux-gnueabihf
checking how to print strings... printf
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking the maximum length of command line arguments... 1572864
checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop
checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... mt
checking if mt is a manifest tool... no
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking how to run the C++ preprocessor... g++ -E
checking for ld used by g++... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking for g++ option to produce PIC... -fPIC -DPIC
checking if g++ PIC flag -fPIC -DPIC works... yes
checking if g++ static flag -static works... yes
checking if g++ supports -c -o file.o... yes
checking if g++ supports -c -o file.o... (cached) yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for library containing lt_dlinit... no
checking for library containing dlopen... -ldl
checking for C compiler vendor... gnu
checking for C compiler version... 7.3.0
checking for /usr/local/cuda/... no
checking for /usr/local/cuda/include... no
checking for /usr/local/cuda/lib... no
checking if javac works... yes
checking for javac... /usr/bin/javac
checking symlink for /usr/bin/javac... /etc/alternatives/javac
checking symlink for /etc/alternatives/javac... /usr/lib/jvm/java-9-openjdk-armhf/bin/javac
checking for /usr/lib/jvm/java-9-openjdk-armhf/bin/include/jni.h... no
checking for /usr/lib/jvm/java-9-openjdk-armhf/include/jni.h... yes
checking for doxygen... /usr/bin/doxygen
checking for perl... /usr/bin/perl
checking for dot... /usr/bin/dot
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating hmsbeagle-1.pc
config.status: creating libhmsbeagle/Makefile
config.status: creating libhmsbeagle/GPU/Makefile
config.status: creating libhmsbeagle/GPU/kernels/Makefile
config.status: creating libhmsbeagle/CPU/Makefile
config.status: creating libhmsbeagle/plugin/Makefile
config.status: creating libhmsbeagle/JNI/Makefile
config.status: creating examples/Makefile
config.status: creating examples/tinytest/Makefile
config.status: creating examples/complextest/Makefile
config.status: creating examples/oddstatetest/Makefile
config.status: creating examples/fourtaxon/Makefile
config.status: creating examples/genomictest/Makefile
config.status: creating examples/matrixtest/Makefile
config.status: creating libhmsbeagle/config.h
config.status: executing depfiles commands
config.status: executing libtool commands
configure: WARNING: unrecognized options: --disable-maintainer-mode
configure: WARNING: NVIDIA CUDA nvcc compiler not found or CUDA support disabled. CUDA implementation will not be built. If CUDA support is desired, check the path to CUDA and specify --with-cuda=/path/to/cuda
make[1]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
jh_linkjars -a
rm -f debian/libhmsbeagle-dev.debhelper.log debian/libhmsbeagle-java.debhelper.log debian/libhmsbeagle1v5.debhelper.log
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
/usr/bin/make
make[2]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
Making all in libhmsbeagle
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle'
/usr/bin/make all-recursive
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle'
Making all in GPU
make[5]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/GPU'
Making all in kernels
make[6]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/GPU/kernels'
echo "// auto-generated header file with OpenCL kernels code" > BeagleOpenCL_kernels.h
echo "#define KERNELS_STRING_SP_4 \"" | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h
echo "#define STATE_COUNT 4" | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h
cat ./../GPUImplDefs.h | sed 's/\\/\\\\/g' | sed 's/\"/\\"/g' | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h
cat ./kernelsAll.cu | sed 's/\\/\\\\/g' | sed 's/\"/\\"/g' | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h
cat ./kernels4.cu | sed 's/\\/\\\\/g' | sed 's/\"/\\"/g' | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h
echo "\"" >> BeagleOpenCL_kernels.h
for s in 16 32 48 64 80 128 192; do \
echo "Making state count = $s" ; \
echo "#define KERNELS_STRING_SP_$s \"" | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h; \
echo "#define STATE_COUNT $s" | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h; \
cat ./../GPUImplDefs.h | sed 's/\\/\\\\/g' | sed 's/\"/\\"/g' | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h; \
cat ./kernelsAll.cu | sed 's/\\/\\\\/g' | sed 's/\"/\\"/g' | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h; \
cat ./kernelsX.cu | sed 's/\\/\\\\/g' | sed 's/\"/\\"/g' | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h; \
echo "\"" >> BeagleOpenCL_kernels.h; \
done
Making state count = 16
Making state count = 32
Making state count = 48
Making state count = 64
Making state count = 80
Making state count = 128
Making state count = 192
echo "#define KERNELS_STRING_DP_4 \"" | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h
echo "#define STATE_COUNT 4" | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h
echo "#define DOUBLE_PRECISION" | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h
cat ./../GPUImplDefs.h | sed 's/\\/\\\\/g' | sed 's/\"/\\"/g' | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h
cat ./kernelsAll.cu | sed 's/\\/\\\\/g' | sed 's/\"/\\"/g' | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h
cat ./kernels4.cu | sed 's/\\/\\\\/g' | sed 's/\"/\\"/g' | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h
echo "\"" >> BeagleOpenCL_kernels.h
for s in 16 32 48 64 80 128 192; do \
echo "Making state count = $s DP"; \
echo "#define KERNELS_STRING_DP_$s \"" | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h; \
echo "#define STATE_COUNT $s" | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h; \
echo "#define DOUBLE_PRECISION" | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h; \
cat ./../GPUImplDefs.h | sed 's/\\/\\\\/g' | sed 's/\"/\\"/g' | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h; \
cat ./kernelsAll.cu | sed 's/\\/\\\\/g' | sed 's/\"/\\"/g' | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h; \
cat ./kernelsX.cu | sed 's/\\/\\\\/g' | sed 's/\"/\\"/g' | sed 's/$/\\n\\/' >> BeagleOpenCL_kernels.h; \
echo "\"" >> BeagleOpenCL_kernels.h; \
done
Making state count = 16 DP
Making state count = 32 DP
Making state count = 48 DP
Making state count = 64 DP
Making state count = 80 DP
Making state count = 128 DP
Making state count = 192 DP
/usr/bin/make all-am
make[7]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/GPU/kernels'
make[7]: Nothing to be done for 'all-am'.
make[7]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/GPU/kernels'
make[6]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/GPU/kernels'
make[6]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/GPU'
/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-9-openjdk-armhf/include -I/usr/lib/jvm/java-9-openjdk-armhf/include/linux -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_opencl_la-GPUImplHelper.lo `test -f 'GPUImplHelper.cpp' || echo './'`GPUImplHelper.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-9-openjdk-armhf/include -I/usr/lib/jvm/java-9-openjdk-armhf/include/linux -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -c GPUImplHelper.cpp -fPIC -DPIC -o .libs/libhmsbeagle_opencl_la-GPUImplHelper.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-9-openjdk-armhf/include -I/usr/lib/jvm/java-9-openjdk-armhf/include/linux -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -c GPUImplHelper.cpp -o libhmsbeagle_opencl_la-GPUImplHelper.o >/dev/null 2>&1
/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-9-openjdk-armhf/include -I/usr/lib/jvm/java-9-openjdk-armhf/include/linux -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_opencl_la-GPUInterfaceOpenCL.lo `test -f 'GPUInterfaceOpenCL.cpp' || echo './'`GPUInterfaceOpenCL.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-9-openjdk-armhf/include -I/usr/lib/jvm/java-9-openjdk-armhf/include/linux -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -c GPUInterfaceOpenCL.cpp -fPIC -DPIC -o .libs/libhmsbeagle_opencl_la-GPUInterfaceOpenCL.o
GPUInterfaceOpenCL.cpp: In member function 'void opencl_device::GPUInterface::SetDevice(int, int, int, int, int, long int)':
GPUInterfaceOpenCL.cpp:316:68: warning: '_cl_command_queue* clCreateCommandQueue(cl_context, cl_device_id, cl_command_queue_properties, cl_int*)' is deprecated [-Wdeprecated-declarations]
queueProperties, &err);
^
In file included from /usr/include/CL/opencl.h:47:0,
from /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/GPU/GPUInterface.h:57,
from GPUInterfaceOpenCL.cpp:39:
/usr/include/CL/cl.h:1443:1: note: declared here
clCreateCommandQueue(cl_context /* context */,
^~~~~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-9-openjdk-armhf/include -I/usr/lib/jvm/java-9-openjdk-armhf/include/linux -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -c GPUInterfaceOpenCL.cpp -o libhmsbeagle_opencl_la-GPUInterfaceOpenCL.o >/dev/null 2>&1
/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-9-openjdk-armhf/include -I/usr/lib/jvm/java-9-openjdk-armhf/include/linux -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_opencl_la-KernelLauncher.lo `test -f 'KernelLauncher.cpp' || echo './'`KernelLauncher.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-9-openjdk-armhf/include -I/usr/lib/jvm/java-9-openjdk-armhf/include/linux -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -c KernelLauncher.cpp -fPIC -DPIC -o .libs/libhmsbeagle_opencl_la-KernelLauncher.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-9-openjdk-armhf/include -I/usr/lib/jvm/java-9-openjdk-armhf/include/linux -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -c KernelLauncher.cpp -o libhmsbeagle_opencl_la-KernelLauncher.o >/dev/null 2>&1
/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-9-openjdk-armhf/include -I/usr/lib/jvm/java-9-openjdk-armhf/include/linux -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_opencl_la-KernelResource.lo `test -f 'KernelResource.cpp' || echo './'`KernelResource.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-9-openjdk-armhf/include -I/usr/lib/jvm/java-9-openjdk-armhf/include/linux -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -c KernelResource.cpp -fPIC -DPIC -o .libs/libhmsbeagle_opencl_la-KernelResource.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-9-openjdk-armhf/include -I/usr/lib/jvm/java-9-openjdk-armhf/include/linux -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -c KernelResource.cpp -o libhmsbeagle_opencl_la-KernelResource.o >/dev/null 2>&1
/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-9-openjdk-armhf/include -I/usr/lib/jvm/java-9-openjdk-armhf/include/linux -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_opencl_la-OpenCLPlugin.lo `test -f 'OpenCLPlugin.cpp' || echo './'`OpenCLPlugin.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-9-openjdk-armhf/include -I/usr/lib/jvm/java-9-openjdk-armhf/include/linux -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -c OpenCLPlugin.cpp -fPIC -DPIC -o .libs/libhmsbeagle_opencl_la-OpenCLPlugin.o
In file included from /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/GPU/OpenCLPlugin.h:16:0,
from OpenCLPlugin.cpp:9:
/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/plugin/Plugin.h:59:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
throw (SharedLibraryException);
^~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-9-openjdk-armhf/include -I/usr/lib/jvm/java-9-openjdk-armhf/include/linux -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -c OpenCLPlugin.cpp -o libhmsbeagle_opencl_la-OpenCLPlugin.o >/dev/null 2>&1
/bin/bash ../../libtool --tag=CXX --mode=link g++ -D FW_OPENCL -I/usr/include/CL/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -module -version-number 21 -Wl,-z,relro -Wl,-z,now -o libhmsbeagle-opencl.la -rpath /usr/lib/arm-linux-gnueabihf libhmsbeagle_opencl_la-GPUImplHelper.lo libhmsbeagle_opencl_la-GPUInterfaceOpenCL.lo libhmsbeagle_opencl_la-KernelLauncher.lo libhmsbeagle_opencl_la-KernelResource.lo libhmsbeagle_opencl_la-OpenCLPlugin.lo -lOpenCL -ldl
libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/7/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/7/crtbeginS.o .libs/libhmsbeagle_opencl_la-GPUImplHelper.o .libs/libhmsbeagle_opencl_la-GPUInterfaceOpenCL.o .libs/libhmsbeagle_opencl_la-KernelLauncher.o .libs/libhmsbeagle_opencl_la-KernelResource.o .libs/libhmsbeagle_opencl_la-OpenCLPlugin.o -lOpenCL -ldl -L/usr/lib/gcc/arm-linux-gnueabihf/7 -L/usr/lib/gcc/arm-linux-gnueabihf/7/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/7/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/7/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/7/../../../arm-linux-gnueabihf/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libhmsbeagle-opencl.so.21 -o .libs/libhmsbeagle-opencl.so.21.0.0
libtool: link: (cd ".libs" && rm -f "libhmsbeagle-opencl.so.21" && ln -s "libhmsbeagle-opencl.so.21.0.0" "libhmsbeagle-opencl.so.21")
libtool: link: (cd ".libs" && rm -f "libhmsbeagle-opencl.so" && ln -s "libhmsbeagle-opencl.so.21.0.0" "libhmsbeagle-opencl.so")
libtool: link: ar cru .libs/libhmsbeagle-opencl.a libhmsbeagle_opencl_la-GPUImplHelper.o libhmsbeagle_opencl_la-GPUInterfaceOpenCL.o libhmsbeagle_opencl_la-KernelLauncher.o libhmsbeagle_opencl_la-KernelResource.o libhmsbeagle_opencl_la-OpenCLPlugin.o
ar: `u' modifier ignored since `D' is the default (see `U')
libtool: link: ranlib .libs/libhmsbeagle-opencl.a
libtool: link: ( cd ".libs" && rm -f "libhmsbeagle-opencl.la" && ln -s "../libhmsbeagle-opencl.la" "libhmsbeagle-opencl.la" )
make[6]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/GPU'
make[5]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/GPU'
Making all in CPU
make[5]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/CPU'
/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-9-openjdk-armhf/include -I/usr/lib/jvm/java-9-openjdk-armhf/include/linux -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_cpu_la-BeagleCPUPlugin.lo `test -f 'BeagleCPUPlugin.cpp' || echo './'`BeagleCPUPlugin.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-9-openjdk-armhf/include -I/usr/lib/jvm/java-9-openjdk-armhf/include/linux -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -c BeagleCPUPlugin.cpp -fPIC -DPIC -o .libs/libhmsbeagle_cpu_la-BeagleCPUPlugin.o
In file included from /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/CPU/BeagleCPUPlugin.h:16:0,
from BeagleCPUPlugin.cpp:8:
/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/plugin/Plugin.h:59:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
throw (SharedLibraryException);
^~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -I/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-9-openjdk-armhf/include -I/usr/lib/jvm/java-9-openjdk-armhf/include/linux -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -c BeagleCPUPlugin.cpp -o libhmsbeagle_cpu_la-BeagleCPUPlugin.o >/dev/null 2>&1
/bin/bash ../../libtool --tag=CXX --mode=link g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -module -version-number 21 -Wl,-z,relro -Wl,-z,now -o libhmsbeagle-cpu.la -rpath /usr/lib/arm-linux-gnueabihf libhmsbeagle_cpu_la-BeagleCPUPlugin.lo -ldl
libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/7/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/7/crtbeginS.o .libs/libhmsbeagle_cpu_la-BeagleCPUPlugin.o -ldl -L/usr/lib/gcc/arm-linux-gnueabihf/7 -L/usr/lib/gcc/arm-linux-gnueabihf/7/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/7/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/7/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/7/../../../arm-linux-gnueabihf/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libhmsbeagle-cpu.so.21 -o .libs/libhmsbeagle-cpu.so.21.0.0
libtool: link: (cd ".libs" && rm -f "libhmsbeagle-cpu.so.21" && ln -s "libhmsbeagle-cpu.so.21.0.0" "libhmsbeagle-cpu.so.21")
libtool: link: (cd ".libs" && rm -f "libhmsbeagle-cpu.so" && ln -s "libhmsbeagle-cpu.so.21.0.0" "libhmsbeagle-cpu.so")
libtool: link: ar cru .libs/libhmsbeagle-cpu.a libhmsbeagle_cpu_la-BeagleCPUPlugin.o
ar: `u' modifier ignored since `D' is the default (see `U')
libtool: link: ranlib .libs/libhmsbeagle-cpu.a
libtool: link: ( cd ".libs" && rm -f "libhmsbeagle-cpu.la" && ln -s "../libhmsbeagle-cpu.la" "libhmsbeagle-cpu.la" )
make[5]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/CPU'
Making all in plugin
make[5]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/plugin'
/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-9-openjdk-armhf/include -I/usr/lib/jvm/java-9-openjdk-armhf/include/linux -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libplugin_la-Plugin.lo `test -f 'Plugin.cpp' || echo './'`Plugin.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-9-openjdk-armhf/include -I/usr/lib/jvm/java-9-openjdk-armhf/include/linux -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -c Plugin.cpp -fPIC -DPIC -o .libs/libplugin_la-Plugin.o
In file included from Plugin.cpp:9:0:
../../libhmsbeagle/plugin/Plugin.h:59:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
throw (SharedLibraryException);
^~~~~
Plugin.cpp:25:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
throw (SharedLibraryException)
^~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-9-openjdk-armhf/include -I/usr/lib/jvm/java-9-openjdk-armhf/include/linux -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -c Plugin.cpp -o libplugin_la-Plugin.o >/dev/null 2>&1
/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-9-openjdk-armhf/include -I/usr/lib/jvm/java-9-openjdk-armhf/include/linux -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libplugin_la-UnixSharedLibrary.lo `test -f 'UnixSharedLibrary.cpp' || echo './'`UnixSharedLibrary.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-9-openjdk-armhf/include -I/usr/lib/jvm/java-9-openjdk-armhf/include/linux -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -c UnixSharedLibrary.cpp -fPIC -DPIC -o .libs/libplugin_la-UnixSharedLibrary.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-9-openjdk-armhf/include -I/usr/lib/jvm/java-9-openjdk-armhf/include/linux -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -c UnixSharedLibrary.cpp -o libplugin_la-UnixSharedLibrary.o >/dev/null 2>&1
/bin/bash ../../libtool --tag=CXX --mode=link g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o libplugin.la libplugin_la-Plugin.lo libplugin_la-UnixSharedLibrary.lo -ldl
libtool: link: ar cru .libs/libplugin.a .libs/libplugin_la-Plugin.o .libs/libplugin_la-UnixSharedLibrary.o
ar: `u' modifier ignored since `D' is the default (see `U')
libtool: link: ranlib .libs/libplugin.a
libtool: link: ( cd ".libs" && rm -f "libplugin.la" && ln -s "../libplugin.la" "libplugin.la" )
make[5]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/plugin'
make[5]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle'
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-9-openjdk-armhf/include -I/usr/lib/jvm/java-9-openjdk-armhf/include/linux -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_la-beagle.lo `test -f 'beagle.cpp' || echo './'`beagle.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-9-openjdk-armhf/include -I/usr/lib/jvm/java-9-openjdk-armhf/include/linux -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -c beagle.cpp -fPIC -DPIC -o .libs/libhmsbeagle_la-beagle.o
In file included from beagle.cpp:50:0:
../libhmsbeagle/plugin/Plugin.h:59:7: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
throw (SharedLibraryException);
^~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-9-openjdk-armhf/include -I/usr/lib/jvm/java-9-openjdk-armhf/include/linux -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -c beagle.cpp -o libhmsbeagle_la-beagle.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 2:1:1 -Wl,-z,relro -Wl,-z,now -o libhmsbeagle.la -rpath /usr/lib/arm-linux-gnueabihf libhmsbeagle_la-beagle.lo plugin/libplugin.la -ldl
libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/7/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/7/crtbeginS.o .libs/libhmsbeagle_la-beagle.o -Wl,--whole-archive plugin/.libs/libplugin.a -Wl,--no-whole-archive -ldl -L/usr/lib/gcc/arm-linux-gnueabihf/7 -L/usr/lib/gcc/arm-linux-gnueabihf/7/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/7/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/7/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/7/../../../arm-linux-gnueabihf/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libhmsbeagle.so.1 -o .libs/libhmsbeagle.so.1.1.1
libtool: link: (cd ".libs" && rm -f "libhmsbeagle.so.1" && ln -s "libhmsbeagle.so.1.1.1" "libhmsbeagle.so.1")
libtool: link: (cd ".libs" && rm -f "libhmsbeagle.so" && ln -s "libhmsbeagle.so.1.1.1" "libhmsbeagle.so")
libtool: link: (cd .libs/libhmsbeagle.lax/libplugin.a && ar x "/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/plugin/.libs/libplugin.a")
libtool: link: ar cru .libs/libhmsbeagle.a libhmsbeagle_la-beagle.o .libs/libhmsbeagle.lax/libplugin.a/libplugin_la-Plugin.o .libs/libhmsbeagle.lax/libplugin.a/libplugin_la-UnixSharedLibrary.o
ar: `u' modifier ignored since `D' is the default (see `U')
libtool: link: ranlib .libs/libhmsbeagle.a
libtool: link: rm -fr .libs/libhmsbeagle.lax
libtool: link: ( cd ".libs" && rm -f "libhmsbeagle.la" && ln -s "../libhmsbeagle.la" "libhmsbeagle.la" )
make[5]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle'
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle'
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle'
Making all in libhmsbeagle/JNI
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/JNI'
/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-9-openjdk-armhf/include -I/usr/lib/jvm/java-9-openjdk-armhf/include/linux -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.lo `test -f 'beagle_BeagleJNIWrapper.cpp' || echo './'`beagle_BeagleJNIWrapper.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-9-openjdk-armhf/include -I/usr/lib/jvm/java-9-openjdk-armhf/include/linux -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -c beagle_BeagleJNIWrapper.cpp -fPIC -DPIC -o .libs/libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-9-openjdk-armhf/include -I/usr/lib/jvm/java-9-openjdk-armhf/include/linux -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -c beagle_BeagleJNIWrapper.cpp -o libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.o >/dev/null 2>&1
/bin/bash ../../libtool --tag=CXX --mode=link g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -module -avoid-version -Wl,-z,relro -Wl,-z,now -o libhmsbeagle-jni.la -rpath /usr/lib/arm-linux-gnueabihf libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.lo -L../../libhmsbeagle -lhmsbeagle -ldl
libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/7/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/7/crtbeginS.o .libs/libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.o -Wl,-rpath -Wl,/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/.libs -L../../libhmsbeagle /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/.libs/libhmsbeagle.so -ldl -L/usr/lib/gcc/arm-linux-gnueabihf/7 -L/usr/lib/gcc/arm-linux-gnueabihf/7/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/7/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/7/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/7/../../../arm-linux-gnueabihf/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libhmsbeagle-jni.so -o .libs/libhmsbeagle-jni.so
libtool: link: ar cru .libs/libhmsbeagle-jni.a libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.o
ar: `u' modifier ignored since `D' is the default (see `U')
libtool: link: ranlib .libs/libhmsbeagle-jni.a
libtool: link: ( cd ".libs" && rm -f "libhmsbeagle-jni.la" && ln -s "../libhmsbeagle-jni.la" "libhmsbeagle-jni.la" )
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/JNI'
Making all in examples
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples'
Making all in genomictest
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples/genomictest'
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Making all in tinytest
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Making all in oddstatetest
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples/oddstatetest'
make[4]: Nothing to be done for 'all'.
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Making all in complextest
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Making all in fourtaxon
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples/fourtaxon'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples/fourtaxon'
Making all in matrixtest
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples/matrixtest'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples/matrixtest'
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples'
make[4]: Nothing to be done for 'all-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples'
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples'
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
make[3]: Nothing to be done for 'all-am'.
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
make[2]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
/usr/bin/make doxygen-doc
make[2]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
rm -rf doc
SRCDIR='.' PROJECT='libhmsbeagle' DOCDIR='doc' VERSION='2.1.2' PERL_PATH='/usr/bin/perl' HAVE_DOT='YES' DOT_PATH='/usr/bin' GENERATE_MAN='YES' GENERATE_RTF='NO' GENERATE_XML='NO' GENERATE_HTMLHELP='NO' GENERATE_CHI='NO' GENERATE_HTML='YES' GENERATE_LATEX='NO' /usr/bin/doxygen ./beagle.dox
warning: Tag `XML_SCHEMA' at line 1786 of file `./beagle.dox' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag `XML_DTD' at line 1792 of file `./beagle.dox' has become obsolete.
To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
Notice: Output directory `doc' does not exist. I have created it for you.
Searching for include files...
Searching for example files...
Searching for images...
Searching for dot files...
Searching for msc files...
Searching for dia files...
Searching for files to exclude
Searching INPUT for files to process...
Searching for files in directory /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle
Reading and parsing tag files
Parsing files
Preprocessing /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/beagle.h...
Parsing file /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/beagle.h...
Building group list...
Building directory list...
Building namespace list...
Building file list...
Building class list...
Associating documentation with classes...
Computing nesting relations for classes...
Building example list...
Searching for enumerations...
Searching for documented typedefs...
Searching for members imported via using declarations...
Searching for included using directives...
Searching for documented variables...
Building interface member list...
Building member list...
Searching for friends...
Searching for documented defines...
Computing class inheritance relations...
Computing class usage relations...
Flushing cached template relations that have become invalid...
Computing class relations...
Add enum values to enums...
Searching for member function documentation...
Creating members for template instances...
Building page list...
Search for main page...
Computing page relations...
Determining the scope of groups...
Sorting lists...
Freeing entry tree
Determining which enums are documented
Computing member relations...
Building full member lists recursively...
Adding members to member groups.
Computing member references...
Inheriting documentation...
Generating disk names...
Adding source references...
Adding xrefitems...
Sorting member lists...
Computing dependencies between directories...
Generating citations page...
Counting data structures...
Resolving user defined references...
Finding anchors and sections in the documentation...
Transferring function references...
Combining using relations...
Adding members to index pages...
Generating style sheet...
Generating search indices...
Generating example documentation...
Generating file sources...
Generating code for file libhmsbeagle/beagle.h...
Generating file documentation...
Generating docs for file libhmsbeagle/beagle.h...
Generating page documentation...
Generating group documentation...
Generating class documentation...
Generating docs for compound BeagleInstanceDetails...
Generating docs for compound BeagleOperation...
Generating docs for compound BeagleResource...
Generating docs for compound BeagleResourceList...
Generating namespace index...
Generating graph info page...
Generating directory documentation...
Generating index page...
Generating page index...
Generating module index...
Generating namespace index...
Generating namespace member index...
Generating annotated compound index...
Generating alphabetical compound index...
Generating hierarchical class index...
Generating graphical class hierarchy...
Generating member index...
Generating file index...
Generating file member index...
Generating example index...
finalizing index lists...
writing tag file...
Running dot...
Generating dot graphs using 5 parallel threads...
Running dot for graph 1/3
Running dot for graph 2/3
Running dot for graph 3/3
Patching output file 1/2
Patching output file 2/2
lookup cache used 103/65536 hits=138 misses=104
finished...
make[2]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
ant
Buildfile: /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/build.xml
init:
[mkdir] Created dir: /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/build
[mkdir] Created dir: /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/lib
compile:
[javac] /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/build.xml:37: warning: 'includeantruntime' was not set, defaulting to build.sysclasspath=last; set to false for repeatable builds
[javac] Using javac -source 1.6 is no longer supported, switching to 1.7
[javac] Using javac -target 1.6 is no longer supported, switching to 1.7
[javac] Compiling 13 source files to /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/build
[javac] warning: [options] bootstrap class path not set in conjunction with -source 1.7
[javac] Note: Some input files use or override a deprecated API.
[javac] Note: Recompile with -Xlint:deprecation for details.
[javac] 1 warning
dist:
[jar] Building jar: /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/lib/beagle.jar
BUILD SUCCESSFUL
Total time: 15 seconds
make[1]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
jh_build -a
debian/rules override_dh_auto_test
make[1]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
No OpenCL platform available, skipping test
make[1]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
create-stamp debian/debhelper-build-stamp
fakeroot debian/rules binary-arch
dh binary-arch --with javahelper
dh_testroot -a
dh_prep -a
rm -f -- debian/libhmsbeagle-dev.substvars debian/libhmsbeagle1v5.substvars debian/libhmsbeagle-java.substvars
rm -fr -- debian/.debhelper/generated/libhmsbeagle-dev/ debian/libhmsbeagle-dev/ debian/tmp/ debian/.debhelper/generated/libhmsbeagle1v5/ debian/libhmsbeagle1v5/ debian/.debhelper/generated/libhmsbeagle-java/ debian/libhmsbeagle-java/
dh_installdirs -a
install -d debian/libhmsbeagle-dev/usr/lib debian/libhmsbeagle-dev/usr/include
install -d debian/libhmsbeagle1v5/usr/lib
dh_auto_install -a
install -d /<<BUILDDIR>>/libhmsbeagle-2.1.2\+git20180307/debian/tmp
make -j1 install DESTDIR=/<<BUILDDIR>>/libhmsbeagle-2.1.2\+git20180307/debian/tmp AM_UPDATE_INFO_DIR=no
make[1]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
Making install in libhmsbeagle
make[2]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle'
Making install in GPU
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/GPU'
Making install in kernels
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/GPU/kernels'
make install-am
make[5]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/GPU/kernels'
make[6]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/GPU/kernels'
make[6]: Nothing to be done for 'install-exec-am'.
make[6]: Nothing to be done for 'install-data-am'.
make[6]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/GPU/kernels'
make[5]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/GPU/kernels'
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/GPU/kernels'
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/GPU'
make[5]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/GPU'
/bin/mkdir -p '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf'
/bin/bash ../../libtool --mode=install /usr/bin/install -c libhmsbeagle-opencl.la '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/libhmsbeagle-opencl.so.21.0.0 /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so.21.0.0
libtool: install: (cd /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libhmsbeagle-opencl.so.21.0.0 libhmsbeagle-opencl.so.21 || { rm -f libhmsbeagle-opencl.so.21 && ln -s libhmsbeagle-opencl.so.21.0.0 libhmsbeagle-opencl.so.21; }; })
libtool: install: (cd /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libhmsbeagle-opencl.so.21.0.0 libhmsbeagle-opencl.so || { rm -f libhmsbeagle-opencl.so && ln -s libhmsbeagle-opencl.so.21.0.0 libhmsbeagle-opencl.so; }; })
libtool: install: /usr/bin/install -c .libs/libhmsbeagle-opencl.lai /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.la
libtool: install: /usr/bin/install -c .libs/libhmsbeagle-opencl.a /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.a
libtool: install: chmod 644 /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.a
libtool: install: ranlib /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.a
libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf'
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/GPU'
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/GPU'
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/GPU'
Making install in CPU
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/CPU'
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/CPU'
/bin/mkdir -p '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf'
/bin/bash ../../libtool --mode=install /usr/bin/install -c libhmsbeagle-cpu.la '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/libhmsbeagle-cpu.so.21.0.0 /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so.21.0.0
libtool: install: (cd /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libhmsbeagle-cpu.so.21.0.0 libhmsbeagle-cpu.so.21 || { rm -f libhmsbeagle-cpu.so.21 && ln -s libhmsbeagle-cpu.so.21.0.0 libhmsbeagle-cpu.so.21; }; })
libtool: install: (cd /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libhmsbeagle-cpu.so.21.0.0 libhmsbeagle-cpu.so || { rm -f libhmsbeagle-cpu.so && ln -s libhmsbeagle-cpu.so.21.0.0 libhmsbeagle-cpu.so; }; })
libtool: install: /usr/bin/install -c .libs/libhmsbeagle-cpu.lai /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.la
libtool: install: /usr/bin/install -c .libs/libhmsbeagle-cpu.a /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.a
libtool: install: chmod 644 /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.a
libtool: install: ranlib /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.a
libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf'
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/CPU'
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/CPU'
Making install in plugin
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/plugin'
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/plugin'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/plugin'
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/plugin'
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle'
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle'
/bin/mkdir -p '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf'
/bin/bash ../libtool --mode=install /usr/bin/install -c libhmsbeagle.la '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/libhmsbeagle.so.1.1.1 /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so.1.1.1
libtool: install: (cd /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libhmsbeagle.so.1.1.1 libhmsbeagle.so.1 || { rm -f libhmsbeagle.so.1 && ln -s libhmsbeagle.so.1.1.1 libhmsbeagle.so.1; }; })
libtool: install: (cd /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libhmsbeagle.so.1.1.1 libhmsbeagle.so || { rm -f libhmsbeagle.so && ln -s libhmsbeagle.so.1.1.1 libhmsbeagle.so; }; })
libtool: install: /usr/bin/install -c .libs/libhmsbeagle.lai /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle.la
libtool: install: /usr/bin/install -c .libs/libhmsbeagle.a /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle.a
libtool: install: chmod 644 /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle.a
libtool: install: ranlib /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle.a
libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf'
/bin/mkdir -p '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/include/libhmsbeagle-1/libhmsbeagle'
/usr/bin/install -c -m 644 beagle.h platform.h '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/include/libhmsbeagle-1/libhmsbeagle'
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle'
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle'
make[2]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle'
Making install in libhmsbeagle/JNI
make[2]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/JNI'
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/JNI'
/bin/mkdir -p '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf'
/bin/bash ../../libtool --mode=install /usr/bin/install -c libhmsbeagle-jni.la '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf'
libtool: warning: relinking 'libhmsbeagle-jni.la'
libtool: install: (cd /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/JNI; /bin/bash "/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libtool" --tag CXX --mode=relink g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307=. -fstack-protector-strong -Wformat -Werror=format-security -module -avoid-version -Wl,-z,relro -Wl,-z,now -o libhmsbeagle-jni.la -rpath /usr/lib/arm-linux-gnueabihf libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.lo -L../../libhmsbeagle -lhmsbeagle -ldl -inst-prefix-dir /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp)
libtool: relink: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/7/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/7/crtbeginS.o .libs/libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.o -L../../libhmsbeagle -L/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lhmsbeagle -ldl -L/usr/lib/gcc/arm-linux-gnueabihf/7 -L/usr/lib/gcc/arm-linux-gnueabihf/7/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/7/../../.. -L/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/7/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/7/../../../arm-linux-gnueabihf/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libhmsbeagle-jni.so -o .libs/libhmsbeagle-jni.so
libtool: install: /usr/bin/install -c .libs/libhmsbeagle-jni.soT /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-jni.so
libtool: install: /usr/bin/install -c .libs/libhmsbeagle-jni.lai /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-jni.la
libtool: install: /usr/bin/install -c .libs/libhmsbeagle-jni.a /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-jni.a
libtool: install: chmod 644 /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-jni.a
libtool: install: ranlib /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-jni.a
libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf'
make[3]: Nothing to be done for 'install-data-am'.
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/JNI'
make[2]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/libhmsbeagle/JNI'
Making install in examples
make[2]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples'
Making install in genomictest
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples/genomictest'
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples/genomictest'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples/genomictest'
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples/genomictest'
Making install in tinytest
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples/tinytest'
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples/tinytest'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples/tinytest'
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples/tinytest'
Making install in oddstatetest
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples/oddstatetest'
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples/oddstatetest'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples/oddstatetest'
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples/oddstatetest'
Making install in complextest
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples/complextest'
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples/complextest'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples/complextest'
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples/complextest'
Making install in fourtaxon
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples/fourtaxon'
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples/fourtaxon'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples/fourtaxon'
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples/fourtaxon'
Making install in matrixtest
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples/matrixtest'
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples/matrixtest'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples/matrixtest'
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples/matrixtest'
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples'
make[4]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples'
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples'
make[2]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/examples'
make[2]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
make[3]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
make[3]: Nothing to be done for 'install-exec-am'.
/bin/mkdir -p '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig'
/usr/bin/install -c -m 644 hmsbeagle-1.pc '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig'
make[3]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
make[2]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
make[1]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
debian/rules override_dh_install
make[1]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
dh_install
cp --reflink=auto -a debian/tmp/usr/include/libhmsbeagle-1 debian/libhmsbeagle-dev//usr/include/
install -d debian/libhmsbeagle-dev//usr/lib/arm-linux-gnueabihf
cp --reflink=auto -a debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.a debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle.a debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so debian/libhmsbeagle-dev//usr/lib/arm-linux-gnueabihf/
install -d debian/libhmsbeagle-dev//usr/lib/arm-linux-gnueabihf/pkgconfig
cp --reflink=auto -a debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig/hmsbeagle-1.pc debian/libhmsbeagle-dev//usr/lib/arm-linux-gnueabihf/pkgconfig/
install -d debian/.debhelper/generated/libhmsbeagle-dev
install -d debian/libhmsbeagle1v5//usr/lib/arm-linux-gnueabihf
cp --reflink=auto -a debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so.21 debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so.21.0.0 debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-jni.so debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so.21 debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so.21.0.0 debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so.1 debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so.1.1.1 debian/libhmsbeagle1v5//usr/lib/arm-linux-gnueabihf/
install -d debian/.debhelper/generated/libhmsbeagle1v5
install -d debian/.debhelper/generated/libhmsbeagle-java
jniso=`find debian/libhmsbeagle1v5 -name libhmsbeagle-jni.so` ; \
mkdir -p `dirname $jniso`/jni ; \
mv $jniso `dirname $jniso`/jni
make[1]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
jh_installjavadoc -a
rm -f debian/libhmsbeagle-dev.debhelper.log debian/libhmsbeagle-java.debhelper.log debian/libhmsbeagle1v5.debhelper.log
debian/rules override_dh_installdocs
make[1]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
dh_installdocs
install -d debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev
cd './doc/html/..' && find 'html' \( -type f -or -type l \) -and ! -empty -print0 | LC_ALL=C sort -z | xargs -0 -I {} cp --reflink=auto --parents -dp {} /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev
chown -R 0:0 debian/libhmsbeagle-dev/usr/share/doc
chmod -R u\+rw,go=rX debian/libhmsbeagle-dev/usr/share/doc
install -p -m0644 debian/README.Debian debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/README.Debian
install -p -m0644 debian/copyright debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/copyright
install -d debian/libhmsbeagle-dev/usr/share/doc-base/
install -p -m0644 debian/libhmsbeagle-dev.doc-base debian/libhmsbeagle-dev/usr/share/doc-base/libhmsbeagle
install -d debian/libhmsbeagle1v5/usr/share/doc/libhmsbeagle1v5
install -p -m0644 debian/copyright debian/libhmsbeagle1v5/usr/share/doc/libhmsbeagle1v5/copyright
install -d debian/libhmsbeagle-java/usr/share/doc/libhmsbeagle-java
install -p -m0644 debian/copyright debian/libhmsbeagle-java/usr/share/doc/libhmsbeagle-java/copyright
find debian/libhmsbeagle-dev -name jquery.js -delete
find debian/libhmsbeagle-dev -name "*.md5" -delete
make[1]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
dh_installchangelogs -a
install -p -m0644 debian/changelog debian/libhmsbeagle1v5/usr/share/doc/libhmsbeagle1v5/changelog.Debian
install -p -m0644 debian/changelog debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/changelog.Debian
install -p -m0644 debian/changelog debian/libhmsbeagle-java/usr/share/doc/libhmsbeagle-java/changelog.Debian
dh_installman -a
install -d debian/libhmsbeagle-dev/usr/share/man/man3/
install -p -m0644 ./doc/man/man3/beagle.h.3 debian/libhmsbeagle-dev/usr/share/man/man3/beagle.h.3
install -p -m0644 ./doc/man/man3/BeagleInstanceDetails.3 debian/libhmsbeagle-dev/usr/share/man/man3/BeagleInstanceDetails.3
install -p -m0644 ./doc/man/man3/BeagleOperation.3 debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperation.3
install -p -m0644 ./doc/man/man3/BeagleResource.3 debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResource.3
install -p -m0644 ./doc/man/man3/BeagleResourceList.3 debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResourceList.3
man -l --recode UTF-8 ./debian/libhmsbeagle-dev/usr/share/man/man3/beagle.h.3 > debian/libhmsbeagle-dev/usr/share/man/man3/beagle.h.3.dh-new
man -l --recode UTF-8 ./debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperation.3 > debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperation.3.dh-new
man -l --recode UTF-8 ./debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResourceList.3 > debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResourceList.3.dh-new
mv debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperation.3.dh-new debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperation.3
man -l --recode UTF-8 ./debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResource.3 > debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResource.3.dh-new
mv debian/libhmsbeagle-dev/usr/share/man/man3/beagle.h.3.dh-new debian/libhmsbeagle-dev/usr/share/man/man3/beagle.h.3
man -l --recode UTF-8 ./debian/libhmsbeagle-dev/usr/share/man/man3/BeagleInstanceDetails.3 > debian/libhmsbeagle-dev/usr/share/man/man3/BeagleInstanceDetails.3.dh-new
mv debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResourceList.3.dh-new debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResourceList.3
chmod 0644 -- debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResourceList.3
mv debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResource.3.dh-new debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResource.3
chmod 0644 -- debian/libhmsbeagle-dev/usr/share/man/man3/BeagleOperation.3 debian/libhmsbeagle-dev/usr/share/man/man3/BeagleResource.3
mv debian/libhmsbeagle-dev/usr/share/man/man3/BeagleInstanceDetails.3.dh-new debian/libhmsbeagle-dev/usr/share/man/man3/BeagleInstanceDetails.3
chmod 0644 -- debian/libhmsbeagle-dev/usr/share/man/man3/beagle.h.3 debian/libhmsbeagle-dev/usr/share/man/man3/BeagleInstanceDetails.3
dh_perl -a
rm -f debian/libhmsbeagle-dev.debhelper.log debian/libhmsbeagle-java.debhelper.log debian/libhmsbeagle1v5.debhelper.log
debian/rules override_dh_link
make[1]: Entering directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
dh_link
rm -f debian/libhmsbeagle-dev/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so
ln -s libhmsbeagle.so.1.1.1 debian/libhmsbeagle-dev/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so
rm -f debian/libhmsbeagle-dev/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so
ln -s libhmsbeagle-cpu.so.21.0.0 debian/libhmsbeagle-dev/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so
rm -f debian/libhmsbeagle-dev/usr/include/libhmsbeagle
ln -s libhmsbeagle-2 debian/libhmsbeagle-dev/usr/include/libhmsbeagle
rm -f debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so.1
ln -s libhmsbeagle.so.1.1.1 debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so.1
rm -f debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so.21
ln -s libhmsbeagle-opencl.so.21.0.0 debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so.21
rm -f debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so.21
ln -s libhmsbeagle-cpu.so.21.0.0 debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so.21
dh_link -plibhmsbeagle-dev usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so.21 usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so
rm -f debian/libhmsbeagle-dev/usr/include/libhmsbeagle
ln -s libhmsbeagle-2 debian/libhmsbeagle-dev/usr/include/libhmsbeagle
rm -f debian/libhmsbeagle-dev/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so
ln -s libhmsbeagle-cpu.so.21.0.0 debian/libhmsbeagle-dev/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so
rm -f debian/libhmsbeagle-dev/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so
ln -s libhmsbeagle.so.1.1.1 debian/libhmsbeagle-dev/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so
rm -f debian/libhmsbeagle-dev/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so
ln -s libhmsbeagle-opencl.so.21 debian/libhmsbeagle-dev/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so
rm -f debian/libhmsbeagle-dev/usr/include/libhmsbeagle
ln -s libhmsbeagle-2 debian/libhmsbeagle-dev/usr/include/libhmsbeagle
make[1]: Leaving directory '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
jh_installlibs -a
Searching /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/libhmsbeagle-dev for libhmsbeagle-dev
Searching /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/libhmsbeagle1v5 for libhmsbeagle1v5
Searching /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/libhmsbeagle-java for libhmsbeagle-java
Installing library lib/beagle.jar into package libhmsbeagle-java
jh_classpath -a
jh_manifest -a
find debian/libhmsbeagle-dev -name '*.jar'
find debian/libhmsbeagle1v5 -name '*.jar'
find debian/libhmsbeagle-java -name '*.jar'
Found usr/share/java/beagle-2.1.2+git20180307.jar
Found symlink usr/share/java/beagle.jar
Reading manifest from debian/libhmsbeagle-java/usr/share/java/beagle-2.1.2+git20180307.jar
No update of debian/libhmsbeagle-java/usr/share/java/beagle-2.1.2+git20180307.jar required.
jh_exec -a
Searching /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/libhmsbeagle-dev for libhmsbeagle-dev
Searching /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/libhmsbeagle1v5 for libhmsbeagle1v5
Searching /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/libhmsbeagle-java for libhmsbeagle-java
jh_depends -a
Searching /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/libhmsbeagle-dev for libhmsbeagle-dev
Searching
Found Jars:
Found Debs:
Adding substvars: java:Depends= java:Recommends=
Searching /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/libhmsbeagle1v5 for libhmsbeagle1v5
Searching
Found Jars:
Found Debs:
Adding substvars: java:Depends= java:Recommends=
Searching /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/libhmsbeagle-java for libhmsbeagle-java
Searching /<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307/debian/libhmsbeagle-java/usr/share/java/beagle-2.1.2+git20180307.jar
Found Jars:
Found Debs:
Adding substvars: java:Depends= java:Recommends=
dh_strip_nondeterminism -a
Using 1523448173 as canonical time
Normalizing debian/libhmsbeagle-dev/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.a using File::StripNondeterminism::handlers::ar
Normalizing debian/libhmsbeagle-dev/usr/lib/arm-linux-gnueabihf/libhmsbeagle.a using File::StripNondeterminism::handlers::ar
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/bc_s.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/bdwn.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/beagle-dox.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/beagle_8h__incl.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/closed.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/doc.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/doxygen.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/folderclosed.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/folderopen.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/graph_legend.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/nav_f.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/nav_g.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/nav_h.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/open.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/splitbar.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/struct_beagle_resource_list__coll__graph.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/sync_off.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/sync_on.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/tab_a.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/tab_b.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/tab_h.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/tab_s.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/search/close.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/search/mag_sel.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/search/search_l.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/search/search_m.png using File::StripNondeterminism::handlers::png
Normalizing debian/libhmsbeagle-dev/usr/share/doc/libhmsbeagle-dev/html/search/search_r.png using File::StripNondeterminism::handlers::png
Using 1523448173 as canonical time
Normalizing debian/libhmsbeagle-java/usr/share/java/beagle-2.1.2+git20180307.jar using File::StripNondeterminism::handlers::jar
dh_compress -a
cd debian/libhmsbeagle-dev
cd debian/libhmsbeagle1v5
cd debian/libhmsbeagle-java
chmod a-x usr/share/doc/libhmsbeagle-java/changelog.Debian
chmod a-x usr/share/doc/libhmsbeagle1v5/changelog.Debian
gzip -9nf usr/share/doc/libhmsbeagle-java/changelog.Debian
gzip -9nf usr/share/doc/libhmsbeagle1v5/changelog.Debian
chmod a-x usr/share/doc/libhmsbeagle-dev/changelog.Debian usr/share/man/man3/BeagleInstanceDetails.3 usr/share/man/man3/BeagleOperation.3 usr/share/man/man3/BeagleResource.3 usr/share/man/man3/BeagleResourceList.3 usr/share/man/man3/beagle.h.3
gzip -9nf usr/share/doc/libhmsbeagle-dev/changelog.Debian usr/share/man/man3/BeagleInstanceDetails.3 usr/share/man/man3/BeagleOperation.3 usr/share/man/man3/BeagleResource.3 usr/share/man/man3/BeagleResourceList.3 usr/share/man/man3/beagle.h.3
cd '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
cd '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
cd '/<<BUILDDIR>>/libhmsbeagle-2.1.2+git20180307'
dh_fixperms -a
find debian/libhmsbeagle-dev -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/libhmsbeagle-java -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/libhmsbeagle1v5 -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/libhmsbeagle-java ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
find debian/libhmsbeagle1v5 ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
find debian/libhmsbeagle-java/usr/share/doc -type f -a -true -a ! -regex 'debian/libhmsbeagle-java/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
find debian/libhmsbeagle-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
find debian/libhmsbeagle1v5/usr/share/doc -type f -a -true -a ! -regex 'debian/libhmsbeagle1v5/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
find debian/libhmsbeagle-java/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
find debian/libhmsbeagle1v5/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
find debian/libhmsbeagle1v5 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/libhmsbeagle-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libhmsbeagle-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
find debian/libhmsbeagle-java -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/libhmsbeagle1v5/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
find debian/libhmsbeagle-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
find debian/libhmsbeagle-dev/usr/share/man debian/libhmsbeagle-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/libhmsbeagle-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/libhmsbeagle-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
dh_missing -a
dh_strip -a
install -d debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/16
objcopy --only-keep-debug --compress-debug-sections debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so.21.0.0 debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/16/5743e91285e5784be8477db46b550a3a2be714.debug
strip --strip-debug --remove-section=.comment --remove-section=.note --enable-deterministic-archives debian/libhmsbeagle-dev/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.a
strip --strip-debug --remove-section=.comment --remove-section=.note --enable-deterministic-archives debian/libhmsbeagle-dev/usr/lib/arm-linux-gnueabihf/libhmsbeagle.a
chmod 0644 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/16/5743e91285e5784be8477db46b550a3a2be714.debug
chown 0:0 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/16/5743e91285e5784be8477db46b550a3a2be714.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so.21.0.0
objcopy --add-gnu-debuglink debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/16/5743e91285e5784be8477db46b550a3a2be714.debug debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so.21.0.0
install -d debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/0d
objcopy --only-keep-debug --compress-debug-sections debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so.21.0.0 debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/0d/57955c8b892f7dbc3033c24fd50f7a01544b95.debug
chmod 0644 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/0d/57955c8b892f7dbc3033c24fd50f7a01544b95.debug
chown 0:0 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/0d/57955c8b892f7dbc3033c24fd50f7a01544b95.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so.21.0.0
objcopy --add-gnu-debuglink debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/0d/57955c8b892f7dbc3033c24fd50f7a01544b95.debug debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so.21.0.0
install -d debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/a0
objcopy --only-keep-debug --compress-debug-sections debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so.1.1.1 debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/a0/2d6ffc422e979c5d1ceae6f10be95520948b29.debug
chmod 0644 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/a0/2d6ffc422e979c5d1ceae6f10be95520948b29.debug
chown 0:0 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/a0/2d6ffc422e979c5d1ceae6f10be95520948b29.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so.1.1.1
objcopy --add-gnu-debuglink debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/a0/2d6ffc422e979c5d1ceae6f10be95520948b29.debug debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so.1.1.1
install -d debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/d8
objcopy --only-keep-debug --compress-debug-sections debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/jni/libhmsbeagle-jni.so debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/d8/2091f3dca16269e0ec724df7a0b5bf14bfb626.debug
chmod 0644 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/d8/2091f3dca16269e0ec724df7a0b5bf14bfb626.debug
chown 0:0 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/d8/2091f3dca16269e0ec724df7a0b5bf14bfb626.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/jni/libhmsbeagle-jni.so
objcopy --add-gnu-debuglink debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/lib/debug/.build-id/d8/2091f3dca16269e0ec724df7a0b5bf14bfb626.debug debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/jni/libhmsbeagle-jni.so
install -d debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/share/doc
ln -s libhmsbeagle1v5 debian/.debhelper/libhmsbeagle1v5/dbgsym-root/usr/share/doc/libhmsbeagle1v5-dbgsym
dh_makeshlibs -a
rm -f debian/libhmsbeagle-dev/DEBIAN/shlibs
rm -f debian/libhmsbeagle1v5/DEBIAN/shlibs
install -d debian/libhmsbeagle1v5/DEBIAN
echo "libhmsbeagle-cpu 21 libhmsbeagle1v5" >> debian/libhmsbeagle1v5/DEBIAN/shlibs
echo "libhmsbeagle-opencl 21 libhmsbeagle1v5" >> debian/libhmsbeagle1v5/DEBIAN/shlibs
echo "libhmsbeagle 1 libhmsbeagle1v5" >> debian/libhmsbeagle1v5/DEBIAN/shlibs
chmod 0644 -- debian/libhmsbeagle1v5/DEBIAN/shlibs
chown 0:0 -- debian/libhmsbeagle1v5/DEBIAN/shlibs
mv debian/.debhelper/generated/libhmsbeagle1v5/triggers.new debian/.debhelper/generated/libhmsbeagle1v5/triggers
rm -f debian/libhmsbeagle-java/DEBIAN/shlibs
dh_shlibdeps -a
dpkg-shlibdeps -Tdebian/libhmsbeagle1v5.substvars debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so.21.0.0 debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so.21.0.0 debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so.1.1.1 debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/jni/libhmsbeagle-jni.so
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so.1.1.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so.21.0.0 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libhmsbeagle1v5/usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so.21.0.0 found in none of the libraries
dh_installdeb -a
install -d debian/libhmsbeagle-dev/DEBIAN
install -p -m0644 debian/.debhelper/generated/libhmsbeagle1v5/triggers debian/libhmsbeagle1v5/DEBIAN/triggers
install -d debian/libhmsbeagle-java/DEBIAN
dh_gencontrol -a
echo misc:Depends= >> debian/libhmsbeagle-dev.substvars
echo misc:Pre-Depends= >> debian/libhmsbeagle-dev.substvars
dpkg-gencontrol -plibhmsbeagle-dev -ldebian/changelog -Tdebian/libhmsbeagle-dev.substvars -Pdebian/libhmsbeagle-dev -UMulti-Arch
echo misc:Depends= >> debian/libhmsbeagle-java.substvars
echo misc:Pre-Depends= >> debian/libhmsbeagle-java.substvars
dpkg-gencontrol -plibhmsbeagle-java -ldebian/changelog -Tdebian/libhmsbeagle-java.substvars -Pdebian/libhmsbeagle-java -UMulti-Arch
echo misc:Depends= >> debian/libhmsbeagle1v5.substvars
echo misc:Pre-Depends= >> debian/libhmsbeagle1v5.substvars
install -d debian/.debhelper/libhmsbeagle1v5/dbgsym-root/DEBIAN
dpkg-gencontrol -plibhmsbeagle1v5 -ldebian/changelog -Tdebian/libhmsbeagle1v5.substvars -Pdebian/.debhelper/libhmsbeagle1v5/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -DPackage=libhmsbeagle1v5-dbgsym "-DDepends=libhmsbeagle1v5 (= \${binary:Version})" "-DDescription=debug symbols for libhmsbeagle1v5" "-DBuild-Ids=0d57955c8b892f7dbc3033c24fd50f7a01544b95 165743e91285e5784be8477db46b550a3a2be714 a02d6ffc422e979c5d1ceae6f10be95520948b29 d82091f3dca16269e0ec724df7a0b5bf14bfb626" -DSection=debug -UMulti-Arch -UReplaces -UBreaks
dpkg-gencontrol: warning: Depends field of package libhmsbeagle-dev: unknown substitution variable ${shlibs:Depends}
dpkg-gencontrol: warning: Depends field of package libhmsbeagle-java: unknown substitution variable ${shlibs:Depends}
chmod 0644 -- debian/libhmsbeagle-java/DEBIAN/control
chown 0:0 -- debian/libhmsbeagle-java/DEBIAN/control
chmod 0644 -- debian/libhmsbeagle-dev/DEBIAN/control
chown 0:0 -- debian/libhmsbeagle-dev/DEBIAN/control
chmod 0644 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/DEBIAN/control
chown 0:0 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/DEBIAN/control
dpkg-gencontrol -plibhmsbeagle1v5 -ldebian/changelog -Tdebian/libhmsbeagle1v5.substvars -Pdebian/libhmsbeagle1v5 -UMulti-Arch
chmod 0644 -- debian/libhmsbeagle1v5/DEBIAN/control
chown 0:0 -- debian/libhmsbeagle1v5/DEBIAN/control
dh_md5sums -a
(cd debian/libhmsbeagle-dev >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums) >/dev/null
(cd debian/libhmsbeagle1v5 >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums) >/dev/null
(cd debian/libhmsbeagle-java >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums) >/dev/null
chmod 0644 -- debian/libhmsbeagle-java/DEBIAN/md5sums
chown 0:0 -- debian/libhmsbeagle-java/DEBIAN/md5sums
chmod 0644 -- debian/libhmsbeagle1v5/DEBIAN/md5sums
chown 0:0 -- debian/libhmsbeagle1v5/DEBIAN/md5sums
(cd debian/.debhelper/libhmsbeagle1v5/dbgsym-root >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums) >/dev/null
chmod 0644 -- debian/libhmsbeagle-dev/DEBIAN/md5sums
chown 0:0 -- debian/libhmsbeagle-dev/DEBIAN/md5sums
chmod 0644 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/DEBIAN/md5sums
chown 0:0 -- debian/.debhelper/libhmsbeagle1v5/dbgsym-root/DEBIAN/md5sums
dh_builddeb -a
dpkg-deb --build debian/libhmsbeagle-dev ..
dpkg-deb --build debian/libhmsbeagle1v5 ..
dpkg-deb --build debian/.debhelper/libhmsbeagle1v5/dbgsym-root ..
dpkg-deb --build debian/libhmsbeagle-java ..
dpkg-deb: building package 'libhmsbeagle-dev' in '../libhmsbeagle-dev_2.1.2+git20180307-1_armhf.deb'.
dpkg-deb: building package 'libhmsbeagle-java' in '../libhmsbeagle-java_2.1.2+git20180307-1_armhf.deb'.
dpkg-deb: building package 'libhmsbeagle1v5' in '../libhmsbeagle1v5_2.1.2+git20180307-1_armhf.deb'.
dpkg-deb: building package 'libhmsbeagle1v5-dbgsym' in '../libhmsbeagle1v5-dbgsym_2.1.2+git20180307-1_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../libhmsbeagle_2.1.2+git20180307-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build libhmsbeagle-2.1.2+git20180307
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2018-04-16T05:53:25Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
libhmsbeagle_2.1.2+git20180307-1_armhf.changes:
-----------------------------------------------
Format: 1.8
Date: Wed, 11 Apr 2018 14:02:53 +0200
Source: libhmsbeagle
Binary: libhmsbeagle-dev libhmsbeagle1v5 libhmsbeagle-java
Architecture: armhf
Version: 2.1.2+git20180307-1
Distribution: buster-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
libhmsbeagle-dev - High-performance lib for Bayesian and Maximum Likelihood phylogen
libhmsbeagle-java - High-performance lib for Bayesian and Maximum Likelihood phylogen
libhmsbeagle1v5 - High-performance lib for Bayesian and Maximum Likelihood phylogen
Changes:
libhmsbeagle (2.1.2+git20180307-1) unstable; urgency=medium
.
* New Github commit
* d/watch now scans Github commits (deleted get-orig-source)
* Standards-Version: 4.1.4
* Point Vcs fields to salsa.debian.org
* Remove unused lintian override
Checksums-Sha1:
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3d1ad229b41ce9d1bbd6e17b68283a7d24e134d5 24428 libhmsbeagle-java_2.1.2+git20180307-1_armhf.deb
7141f8cb18ad1679719a203b468d30e4984eb140 514220 libhmsbeagle1v5-dbgsym_2.1.2+git20180307-1_armhf.deb
0ca851ed09fdfab711682b06330b7429bfa48481 89348 libhmsbeagle1v5_2.1.2+git20180307-1_armhf.deb
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Checksums-Sha256:
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ef7e8fdf5b9ee5b1eddb460ca74e5ade6b264870f624921877822cd3da113711 24428 libhmsbeagle-java_2.1.2+git20180307-1_armhf.deb
7f96c41d6a42020aa82caed4da1f06c0e357d08964d2e7dc44591fdcf4ff2c73 514220 libhmsbeagle1v5-dbgsym_2.1.2+git20180307-1_armhf.deb
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Files:
4b3e4b4a2770dd15f4e4b36d9d7180d0 153412 libdevel optional libhmsbeagle-dev_2.1.2+git20180307-1_armhf.deb
e165980377bbe1fc6f5f603f64c26cb8 24428 java optional libhmsbeagle-java_2.1.2+git20180307-1_armhf.deb
f0aa833930b95906be1e4bc295ab1dce 514220 debug optional libhmsbeagle1v5-dbgsym_2.1.2+git20180307-1_armhf.deb
9133c7d01a1c1efe14a23d2750106aad 89348 libs optional libhmsbeagle1v5_2.1.2+git20180307-1_armhf.deb
0cd3b6cb34e4bc37ebd9f82d73df9b99 11621 libs optional libhmsbeagle_2.1.2+git20180307-1_armhf.buildinfo
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
libhmsbeagle-dev_2.1.2+git20180307-1_armhf.deb
----------------------------------------------
new Debian package, version 2.0.
size 153412 bytes: control archive=3772 bytes.
1261 bytes, 26 lines control
10378 bytes, 118 lines md5sums
Package: libhmsbeagle-dev
Source: libhmsbeagle
Version: 2.1.2+git20180307-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 882
Depends: libhmsbeagle1v5 (= 2.1.2+git20180307-1)
Section: libdevel
Priority: optional
Homepage: https://github.com/beagle-dev/beagle-lib
Description: High-performance lib for Bayesian and Maximum Likelihood phylogenetics (devel)
BEAGLE is a high-performance library that can perform the core calculations at
the heart of most Bayesian and Maximum Likelihood phylogenetics packages. It
can make use of highly-parallel processors such as those in graphics cards
(GPUs) found in many PCs.
.
The project involves an open API and fast implementations of a library for
evaluating phylogenetic likelihoods (continuous time Markov processes) of
biomolecular sequence evolution.
.
The aim is to provide high performance evaluation 'services' to a wide range
of phylogenetic software, both Bayesian samplers and Maximum Likelihood
optimizers. This allows these packages to make use of implementations that
make use of optimized hardware such as graphics processing units.
.
This package contains development files needed to build against Beagle library.
drwxr-xr-x root/root 0 2018-04-11 12:02 ./
drwxr-xr-x root/root 0 2018-04-11 12:02 ./usr/
drwxr-xr-x root/root 0 2018-04-11 12:02 ./usr/include/
lrwxrwxrwx root/root 0 2018-04-11 12:02 ./usr/include/libhmsbeagle -> libhmsbeagle-2
drwxr-xr-x root/root 0 2018-04-11 12:02 ./usr/include/libhmsbeagle-1/
drwxr-xr-x root/root 0 2018-04-11 12:02 ./usr/include/libhmsbeagle-1/libhmsbeagle/
-rw-r--r-- root/root 37735 2018-04-11 12:02 ./usr/include/libhmsbeagle-1/libhmsbeagle/beagle.h
-rw-r--r-- root/root 1637 2018-04-11 12:02 ./usr/include/libhmsbeagle-1/libhmsbeagle/platform.h
drwxr-xr-x root/root 0 2018-04-11 12:02 ./usr/lib/
drwxr-xr-x root/root 0 2018-04-11 12:02 ./usr/lib/arm-linux-gnueabihf/
-rw-r--r-- root/root 228544 2018-04-11 12:02 ./usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.a
lrwxrwxrwx root/root 0 2018-04-11 12:02 ./usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so -> libhmsbeagle-cpu.so.21.0.0
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libhmsbeagle-java_2.1.2+git20180307-1_armhf.deb
-----------------------------------------------
new Debian package, version 2.0.
size 24428 bytes: control archive=1020 bytes.
1194 bytes, 26 lines control
240 bytes, 3 lines md5sums
Package: libhmsbeagle-java
Source: libhmsbeagle
Version: 2.1.2+git20180307-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 34
Depends: libhmsbeagle1v5
Section: java
Priority: optional
Homepage: https://github.com/beagle-dev/beagle-lib
Description: High-performance lib for Bayesian and Maximum Likelihood phylogenetics (java)
BEAGLE is a high-performance library that can perform the core calculations at
the heart of most Bayesian and Maximum Likelihood phylogenetics packages. It
can make use of highly-parallel processors such as those in graphics cards
(GPUs) found in many PCs.
.
The project involves an open API and fast implementations of a library for
evaluating phylogenetic likelihoods (continuous time Markov processes) of
biomolecular sequence evolution.
.
The aim is to provide high performance evaluation 'services' to a wide range
of phylogenetic software, both Bayesian samplers and Maximum Likelihood
optimizers. This allows these packages to make use of implementations that
make use of optimized hardware such as graphics processing units.
.
This package contains the Java interface.
drwxr-xr-x root/root 0 2018-04-11 12:02 ./
drwxr-xr-x root/root 0 2018-04-11 12:02 ./usr/
drwxr-xr-x root/root 0 2018-04-11 12:02 ./usr/share/
drwxr-xr-x root/root 0 2018-04-11 12:02 ./usr/share/doc/
drwxr-xr-x root/root 0 2018-04-11 12:02 ./usr/share/doc/libhmsbeagle-java/
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-rw-r--r-- root/root 1349 2018-04-11 12:02 ./usr/share/doc/libhmsbeagle-java/copyright
drwxr-xr-x root/root 0 2018-04-11 12:02 ./usr/share/java/
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lrwxrwxrwx root/root 0 2018-04-11 12:02 ./usr/share/java/beagle.jar -> beagle-2.1.2+git20180307.jar
libhmsbeagle1v5-dbgsym_2.1.2+git20180307-1_armhf.deb
----------------------------------------------------
new Debian package, version 2.0.
size 514220 bytes: control archive=720 bytes.
546 bytes, 12 lines control
424 bytes, 4 lines md5sums
Package: libhmsbeagle1v5-dbgsym
Source: libhmsbeagle
Version: 2.1.2+git20180307-1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 581
Depends: libhmsbeagle1v5 (= 2.1.2+git20180307-1)
Section: debug
Priority: optional
Description: debug symbols for libhmsbeagle1v5
Build-Ids: 0d57955c8b892f7dbc3033c24fd50f7a01544b95 165743e91285e5784be8477db46b550a3a2be714 a02d6ffc422e979c5d1ceae6f10be95520948b29 d82091f3dca16269e0ec724df7a0b5bf14bfb626
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-rw-r--r-- root/root 173964 2018-04-11 12:02 ./usr/lib/debug/.build-id/0d/57955c8b892f7dbc3033c24fd50f7a01544b95.debug
drwxr-xr-x root/root 0 2018-04-11 12:02 ./usr/lib/debug/.build-id/16/
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drwxr-xr-x root/root 0 2018-04-11 12:02 ./usr/lib/debug/.build-id/a0/
-rw-r--r-- root/root 190152 2018-04-11 12:02 ./usr/lib/debug/.build-id/a0/2d6ffc422e979c5d1ceae6f10be95520948b29.debug
drwxr-xr-x root/root 0 2018-04-11 12:02 ./usr/lib/debug/.build-id/d8/
-rw-r--r-- root/root 38668 2018-04-11 12:02 ./usr/lib/debug/.build-id/d8/2091f3dca16269e0ec724df7a0b5bf14bfb626.debug
drwxr-xr-x root/root 0 2018-04-11 12:02 ./usr/share/
drwxr-xr-x root/root 0 2018-04-11 12:02 ./usr/share/doc/
lrwxrwxrwx root/root 0 2018-04-11 12:02 ./usr/share/doc/libhmsbeagle1v5-dbgsym -> libhmsbeagle1v5
libhmsbeagle1v5_2.1.2+git20180307-1_armhf.deb
---------------------------------------------
new Debian package, version 2.0.
size 89348 bytes: control archive=1308 bytes.
1361 bytes, 26 lines control
509 bytes, 6 lines md5sums
106 bytes, 3 lines shlibs
67 bytes, 2 lines triggers
Package: libhmsbeagle1v5
Source: libhmsbeagle
Version: 2.1.2+git20180307-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 2047
Depends: libc6 (>= 2.4), libgcc1 (>= 1:3.5), libstdc++6 (>= 5.2), ocl-icd-libopencl1 | libopencl1, ocl-icd-libopencl1 (>= 1.0) | libopencl-1.1-1, beignet-opencl-icd | mesa-opencl-icd | opencl-icd
Conflicts: libhmsbeagle1
Replaces: libhmsbeagle1
Section: libs
Priority: optional
Homepage: https://github.com/beagle-dev/beagle-lib
Description: High-performance lib for Bayesian and Maximum Likelihood phylogenetics
BEAGLE is a high-performance library that can perform the core calculations at
the heart of most Bayesian and Maximum Likelihood phylogenetics packages. It
can make use of highly-parallel processors such as those in graphics cards
(GPUs) found in many PCs.
.
The project involves an open API and fast implementations of a library for
evaluating phylogenetic likelihoods (continuous time Markov processes) of
biomolecular sequence evolution.
.
The aim is to provide high performance evaluation 'services' to a wide range
of phylogenetic software, both Bayesian samplers and Maximum Likelihood
optimizers. This allows these packages to make use of implementations that
make use of optimized hardware such as graphics processing units.
drwxr-xr-x root/root 0 2018-04-11 12:02 ./
drwxr-xr-x root/root 0 2018-04-11 12:02 ./usr/
drwxr-xr-x root/root 0 2018-04-11 12:02 ./usr/lib/
drwxr-xr-x root/root 0 2018-04-11 12:02 ./usr/lib/arm-linux-gnueabihf/
drwxr-xr-x root/root 0 2018-04-11 12:02 ./usr/lib/arm-linux-gnueabihf/jni/
-rw-r--r-- root/root 17768 2018-04-11 12:02 ./usr/lib/arm-linux-gnueabihf/jni/libhmsbeagle-jni.so
lrwxrwxrwx root/root 0 2018-04-11 12:02 ./usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so.21 -> libhmsbeagle-cpu.so.21.0.0
-rw-r--r-- root/root 107936 2018-04-11 12:02 ./usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so.21.0.0
lrwxrwxrwx root/root 0 2018-04-11 12:02 ./usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so.21 -> libhmsbeagle-opencl.so.21.0.0
-rw-r--r-- root/root 1918368 2018-04-11 12:02 ./usr/lib/arm-linux-gnueabihf/libhmsbeagle-opencl.so.21.0.0
lrwxrwxrwx root/root 0 2018-04-11 12:02 ./usr/lib/arm-linux-gnueabihf/libhmsbeagle.so.1 -> libhmsbeagle.so.1.1.1
-rw-r--r-- root/root 30112 2018-04-11 12:02 ./usr/lib/arm-linux-gnueabihf/libhmsbeagle.so.1.1.1
drwxr-xr-x root/root 0 2018-04-11 12:02 ./usr/share/
drwxr-xr-x root/root 0 2018-04-11 12:02 ./usr/share/doc/
drwxr-xr-x root/root 0 2018-04-11 12:02 ./usr/share/doc/libhmsbeagle1v5/
-rw-r--r-- root/root 2632 2018-04-11 12:02 ./usr/share/doc/libhmsbeagle1v5/changelog.Debian.gz
-rw-r--r-- root/root 1349 2018-04-11 12:02 ./usr/share/doc/libhmsbeagle1v5/copyright
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 42928
Build-Time: 549
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 1354
Job: libhmsbeagle_2.1.2+git20180307-1
Machine Architecture: armhf
Package: libhmsbeagle
Package-Time: 1959
Source-Version: 2.1.2+git20180307-1
Space: 42928
Status: successful
Version: 2.1.2+git20180307-1
--------------------------------------------------------------------------------
Finished at 2018-04-16T05:53:25Z
Build needed 00:32:39, 42928k disc space