Raspbian Package Auto-Building

libhmsbeagle → 2.1.2+20150609-1 → armhf → 2015-07-24 04:53:27

sbuild (Debian sbuild) 0.65.2 (24 Mar 2015) on bm-wb-02

╔══════════════════════════════════════════════════════════════════════════════╗
║ libhmsbeagle 2.1.2+20150609-1 (armhf)                      24 Jul 2015 04:26 ║
╚══════════════════════════════════════════════════════════════════════════════╝

Package: libhmsbeagle
Version: 2.1.2+20150609-1
Source Version: 2.1.2+20150609-1
Distribution: stretch-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'build/libhmsbeagle-Gdod7W/libhmsbeagle-2.1.2+20150609' with '«PKGBUILDDIR»'
I: NOTICE: Log filtering will replace 'build/libhmsbeagle-Gdod7W' with '«BUILDDIR»'
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/stretch-staging-armhf-sbuild-95d2ac78-211b-4576-9c5a-943d20a6e40e' with '«CHROOT»'

┌──────────────────────────────────────────────────────────────────────────────┐
│ Update chroot                                                                │
└──────────────────────────────────────────────────────────────────────────────┘

Get:1 http://172.17.0.1 stretch-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1 stretch-staging/main Sources [8138 kB]
Get:3 http://172.17.0.1 stretch-staging/main armhf Packages [10.0 MB]
Ign http://172.17.0.1 stretch-staging/main Translation-en
Fetched 18.2 MB in 34s (519 kB/s)
Reading package lists...

┌──────────────────────────────────────────────────────────────────────────────┐
│ Fetch source files                                                           │
└──────────────────────────────────────────────────────────────────────────────┘


Check APT
─────────

Checking available source versions...

Download source files with APT
──────────────────────────────

Reading package lists...
Building dependency tree...
NOTICE: 'libhmsbeagle' packaging is maintained in the 'Git' version control system at:
git://anonscm.debian.org/debian-med/libhmsbeagle.git
Need to get 280 kB of source archives.
Get:1 http://172.17.0.1/private/ stretch-staging/main libhmsbeagle 2.1.2+20150609-1 (dsc) [2318 B]
Get:2 http://172.17.0.1/private/ stretch-staging/main libhmsbeagle 2.1.2+20150609-1 (tar) [243 kB]
Get:3 http://172.17.0.1/private/ stretch-staging/main libhmsbeagle 2.1.2+20150609-1 (diff) [35.0 kB]
Fetched 280 kB in 0s (3613 kB/s)
Download complete and in download only mode

Check architectures
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Check dependencies
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Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-s8iI09/apt_archive/sbuild-build-depends-core-dummy.deb'.
OK
Ign file: ./ InRelease
Get:1 file: ./ Release.gpg [299 B]
Get:2 file: ./ Release [2119 B]
Ign file: ./ Translation-en
Reading package lists...
Reading package lists...

┌──────────────────────────────────────────────────────────────────────────────┐
│ Install core build dependencies (apt-based resolver)                         │
└──────────────────────────────────────────────────────────────────────────────┘

Installing build dependencies
Reading package lists...
Building dependency tree...
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
debconf: delaying package configuration, since apt-utils is not installed
0 upgraded, 1 newly installed, 0 to remove and 90 not upgraded.
Need to get 0 B/818 B of archives.
After this operation, 0 B of additional disk space will be used.
Selecting previously unselected package sbuild-build-depends-core-dummy.
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(Reading database ... 11998 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
Merged Build-Depends: libc6-dev | libc-dev, gcc (>= 4:4.9.1), g++ (>= 4:4.9.1), make, dpkg-dev (>= 1.17.11), debhelper (>= 9), autotools-dev, dh-autoreconf, doxygen, graphviz, javahelper, default-jdk (>= 1:1.6), ant, dh-linktree, libjs-jquery
Filtered Build-Depends: libc6-dev, gcc (>= 4:4.9.1), g++ (>= 4:4.9.1), make, dpkg-dev (>= 1.17.11), debhelper (>= 9), autotools-dev, dh-autoreconf, doxygen, graphviz, javahelper, default-jdk (>= 1:1.6), ant, dh-linktree, libjs-jquery
dpkg-deb: building package `sbuild-build-depends-libhmsbeagle-dummy' in `/«BUILDDIR»/resolver-K29yIR/apt_archive/sbuild-build-depends-libhmsbeagle-dummy.deb'.
OK
Ign file: ./ InRelease
Get:1 file: ./ Release.gpg [299 B]
Get:2 file: ./ Release [2119 B]
Ign file: ./ Translation-en
Reading package lists...
Reading package lists...

┌──────────────────────────────────────────────────────────────────────────────┐
│ Install libhmsbeagle build dependencies (apt-based resolver)                 │
└──────────────────────────────────────────────────────────────────────────────┘

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
  adwaita-icon-theme ant autoconf automake autopoint autotools-dev
  bsdmainutils ca-certificates ca-certificates-java cpp-4.9
  dconf-gsettings-backend dconf-service dctrl-tools debhelper default-jdk
  default-jre default-jre-headless devscripts dh-autoreconf dh-linktree
  dh-python doxygen file fontconfig fontconfig-config fonts-dejavu-core
  g++-4.9 gcc-4.9 gcc-4.9-base gcc-5-base gettext gettext-base glib-networking
  glib-networking-common glib-networking-services graphviz groff-base
  gsettings-desktop-schemas hicolor-icon-theme intltool-debian java-common
  javahelper libarchive-zip-perl libasan1 libasound2 libasound2-data
  libasprintf0c2 libasyncns0 libatk-bridge2.0-0 libatk-wrapper-java
  libatk-wrapper-java-jni libatk1.0-0 libatk1.0-data libatomic1 libatspi2.0-0
  libavahi-client3 libavahi-common-data libavahi-common3 libbsd0
  libcairo-gobject2 libcairo2 libcdt5 libcgraph6 libclang1-3.5 libcolord2
  libcroco3 libcups2 libdatrie1 libdconf1 libedit2 libegl1-mesa libepoxy0
  libexpat1 libffi6 libflac8 libfontconfig1 libfontenc1 libfreetype6 libgbm1
  libgcc-4.9-dev libgcc1 libgd3 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common
  libgif4 libgl1-mesa-glx libglapi-mesa libglib2.0-0 libgnutls-deb0-28
  libgomp1 libgraphite2-3 libgssapi-krb5-2 libgtk-3-0 libgtk-3-bin
  libgtk-3-common libgtk2.0-0 libgtk2.0-common libgvc6 libgvpr2 libharfbuzz0b
  libhogweed4 libice6 libisl13 libjasper1 libjbig0 libjpeg62-turbo
  libjs-jquery libjson-c2 libjson-glib-1.0-0 libjson-glib-1.0-common
  libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblcms2-2 libllvm3.5
  libltdl7 libmagic1 libmpdec2 libmpfr4 libnettle6 libnspr4 libnss3
  libobjc-4.9-dev libobjc4 libogg0 libp11-kit0 libpango-1.0-0
  libpangocairo-1.0-0 libpangoft2-1.0-0 libpathplan4 libpcsclite1 libpipeline1
  libpixman-1-0 libproxy1 libpulse0 libpython3-stdlib libpython3.4-minimal
  libpython3.4-stdlib librest-0.7-0 librsvg2-2 librsvg2-common libsigsegv2
  libsm6 libsndfile1 libsoup-gnome2.4-1 libsoup2.4-1 libsqlite3-0 libssl1.0.0
  libstdc++-4.9-dev libstdc++6 libtasn1-6 libthai-data libthai0 libtiff5
  libtool libubsan0 libunistring0 libvorbis0a libvorbisenc2 libvpx2
  libwayland-client0 libwayland-cursor0 libwayland-egl1-mesa
  libwayland-server0 libwrap0 libx11-6 libx11-data libx11-xcb1 libxapian22
  libxau6 libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0
  libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1
  libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxdot4 libxext6
  libxfixes3 libxft2 libxi6 libxinerama1 libxkbcommon0 libxml2 libxmu6
  libxmuu1 libxpm4 libxrandr2 libxrender1 libxshmfence1 libxt6 libxtst6 libxv1
  libxxf86dga1 libxxf86vm1 m4 man-db mime-support openjdk-7-jdk openjdk-7-jre
  openjdk-7-jre-headless openssl po-debconf python3 python3-minimal python3.4
  python3.4-minimal shared-mime-info tzdata tzdata-java ucf x11-common
  x11-utils xkb-data
Suggested packages:
  ant-doc ant-gcj autoconf-archive gnu-standards autoconf-doc wamerican
  wordlist whois vacation gcc-4.9-locales debtags dh-make bsd-mailx mailx
  cvs-buildpackage debbindiff devscripts-el gnuplot libauthen-sasl-perl
  libfile-desktopentry-perl libnet-smtp-ssl-perl libterm-size-perl
  libyaml-syck-perl mutt ssh-client svn-buildpackage w3m doxygen-latex
  doxygen-doc doxygen-gui gcc-4.9-doc libstdc++6-4.9-dbg libgcc1-dbg
  libgomp1-dbg libitm1-dbg libatomic1-dbg libasan1-dbg liblsan0-dbg
  libtsan0-dbg libubsan0-dbg libcilkrts5-dbg libquadmath-dbg gettext-doc
  gsfonts graphviz-doc groff cvs gawk tofrodos libasound2-plugins alsa-utils
  cups-common libgd-tools gnutls-bin krb5-doc krb5-user gvfs libjasper-runtime
  liblcms2-utils pcscd pulseaudio librsvg2-bin libstdc++-4.9-doc libtool-doc
  automaken gfortran fortran95-compiler gcj-jdk xapian-tools less www-browser
  openjdk-7-demo openjdk-7-source visualvm icedtea-7-plugin libnss-mdns
  sun-java6-fonts fonts-ipafont-gothic fonts-ipafont-mincho ttf-wqy-microhei
  ttf-wqy-zenhei fonts-indic libmail-box-perl python3-doc python3-tk
  python3-venv python3.4-venv python3.4-doc binfmt-support mesa-utils
Recommended packages:
  ant-optional at dput dupload libdistro-info-perl libencode-locale-perl
  libjson-perl liburi-perl libwww-perl lintian patchutils python3-debian
  python3-magic strace unzip wdiff wget curl debian-keyring equivs
  liblwp-protocol-https-perl libsoap-lite-perl libasprintf-dev
  libgettextpo-dev fonts-liberation at-spi2-core colord libgl1-mesa-dri
  libglib2.0-data xdg-user-dirs libgtk2.0-bin javascript-common krb5-locales
  libltdl-dev tcpd xml-core libxt-dev libgnome2-0 libgnomevfs2-0 libgconf2-4
  fonts-dejavu-extra icedtea-7-jre-jamvm libmail-sendmail-perl
The following NEW packages will be installed:
  adwaita-icon-theme ant autoconf automake autopoint autotools-dev
  bsdmainutils ca-certificates ca-certificates-java dconf-gsettings-backend
  dconf-service dctrl-tools debhelper default-jdk default-jre
  default-jre-headless devscripts dh-autoreconf dh-linktree dh-python doxygen
  file fontconfig fontconfig-config fonts-dejavu-core gcc-5-base gettext
  gettext-base glib-networking glib-networking-common glib-networking-services
  graphviz groff-base gsettings-desktop-schemas hicolor-icon-theme
  intltool-debian java-common javahelper libarchive-zip-perl libasound2
  libasound2-data libasprintf0c2 libasyncns0 libatk-bridge2.0-0
  libatk-wrapper-java libatk-wrapper-java-jni libatk1.0-0 libatk1.0-data
  libatspi2.0-0 libavahi-client3 libavahi-common-data libavahi-common3 libbsd0
  libcairo-gobject2 libcairo2 libcdt5 libcgraph6 libclang1-3.5 libcolord2
  libcroco3 libcups2 libdatrie1 libdconf1 libedit2 libegl1-mesa libepoxy0
  libexpat1 libffi6 libflac8 libfontconfig1 libfontenc1 libfreetype6 libgbm1
  libgd3 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgif4 libgl1-mesa-glx
  libglapi-mesa libglib2.0-0 libgnutls-deb0-28 libgraphite2-3 libgssapi-krb5-2
  libgtk-3-0 libgtk-3-bin libgtk-3-common libgtk2.0-0 libgtk2.0-common libgvc6
  libgvpr2 libharfbuzz0b libhogweed4 libice6 libisl13 libjasper1 libjbig0
  libjpeg62-turbo libjs-jquery libjson-c2 libjson-glib-1.0-0
  libjson-glib-1.0-common libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0
  liblcms2-2 libllvm3.5 libltdl7 libmagic1 libmpdec2 libnettle6 libnspr4
  libnss3 libobjc-4.9-dev libobjc4 libogg0 libp11-kit0 libpango-1.0-0
  libpangocairo-1.0-0 libpangoft2-1.0-0 libpathplan4 libpcsclite1 libpipeline1
  libpixman-1-0 libproxy1 libpulse0 libpython3-stdlib libpython3.4-minimal
  libpython3.4-stdlib librest-0.7-0 librsvg2-2 librsvg2-common libsigsegv2
  libsm6 libsndfile1 libsoup-gnome2.4-1 libsoup2.4-1 libsqlite3-0 libssl1.0.0
  libtasn1-6 libthai-data libthai0 libtiff5 libtool libunistring0 libvorbis0a
  libvorbisenc2 libvpx2 libwayland-client0 libwayland-cursor0
  libwayland-egl1-mesa libwayland-server0 libwrap0 libx11-6 libx11-data
  libx11-xcb1 libxapian22 libxau6 libxaw7 libxcb-dri2-0 libxcb-dri3-0
  libxcb-glx0 libxcb-present0 libxcb-render0 libxcb-shape0 libxcb-shm0
  libxcb-sync1 libxcb-xfixes0 libxcb1 libxcomposite1 libxcursor1 libxdamage1
  libxdmcp6 libxdot4 libxext6 libxfixes3 libxft2 libxi6 libxinerama1
  libxkbcommon0 libxml2 libxmu6 libxmuu1 libxpm4 libxrandr2 libxrender1
  libxshmfence1 libxt6 libxtst6 libxv1 libxxf86dga1 libxxf86vm1 m4 man-db
  mime-support openjdk-7-jdk openjdk-7-jre openjdk-7-jre-headless openssl
  po-debconf python3 python3-minimal python3.4 python3.4-minimal
  sbuild-build-depends-libhmsbeagle-dummy shared-mime-info tzdata-java ucf
  x11-common x11-utils xkb-data
The following packages will be upgraded:
  cpp-4.9 g++-4.9 gcc-4.9 gcc-4.9-base libasan1 libatomic1 libgcc-4.9-dev
  libgcc1 libgomp1 libmpfr4 libstdc++-4.9-dev libstdc++6 libubsan0 tzdata
14 upgraded, 211 newly installed, 0 to remove and 76 not upgraded.
Need to get 159 MB/159 MB of archives.
After this operation, 355 MB of additional disk space will be used.
Get:1 http://172.17.0.1/private/ stretch-staging/main gcc-5-base armhf 5.1.1-14+rpi1 [165 kB]
Get:2 http://172.17.0.1/private/ stretch-staging/main libgcc1 armhf 1:5.1.1-14+rpi1 [38.6 kB]
Get:3 http://172.17.0.1/private/ stretch-staging/main libstdc++6 armhf 5.1.1-14+rpi1 [249 kB]
Get:4 http://172.17.0.1/private/ stretch-staging/main libpipeline1 armhf 1.4.0-1 [24.0 kB]
Get:5 http://172.17.0.1/private/ stretch-staging/main groff-base armhf 1.22.3-1 [1085 kB]
Get:6 http://172.17.0.1/private/ stretch-staging/main bsdmainutils armhf 9.0.6 [177 kB]
Get:7 http://172.17.0.1/private/ stretch-staging/main man-db armhf 2.7.0.2-5 [972 kB]
Get:8 http://172.17.0.1/private/ stretch-staging/main libasprintf0c2 armhf 0.19.4-1 [31.5 kB]
Get:9 http://172.17.0.1/private/ stretch-staging/main libbsd0 armhf 0.7.0-2 [63.7 kB]
Get:10 http://172.17.0.1/private/ stretch-staging/main libedit2 armhf 3.1-20150325-1 [70.7 kB]
Get:11 http://172.17.0.1/private/ stretch-staging/main libkeyutils1 armhf 1.5.9-5 [10.9 kB]
Get:12 http://172.17.0.1/private/ stretch-staging/main libkrb5support0 armhf 1.12.1+dfsg-20 [54.9 kB]
Get:13 http://172.17.0.1/private/ stretch-staging/main libk5crypto3 armhf 1.12.1+dfsg-20 [108 kB]
Get:14 http://172.17.0.1/private/ stretch-staging/main libkrb5-3 armhf 1.12.1+dfsg-20 [258 kB]
Get:15 http://172.17.0.1/private/ stretch-staging/main libgssapi-krb5-2 armhf 1.12.1+dfsg-20 [128 kB]
Get:16 http://172.17.0.1/private/ stretch-staging/main libmagic1 armhf 1:5.22+15-2 [244 kB]
Get:17 http://172.17.0.1/private/ stretch-staging/main libtasn1-6 armhf 4.5-2 [43.9 kB]
Get:18 http://172.17.0.1/private/ stretch-staging/main libwrap0 armhf 7.6.q-25 [55.5 kB]
Get:19 http://172.17.0.1/private/ stretch-staging/main libxml2 armhf 2.9.1+dfsg1-5 [703 kB]
Get:20 http://172.17.0.1/private/ stretch-staging/main libexpat1 armhf 2.1.0-6 [60.2 kB]
Get:21 http://172.17.0.1/private/ stretch-staging/main libfreetype6 armhf 2.5.2-4 [412 kB]
Get:22 http://172.17.0.1/private/ stretch-staging/main ucf all 3.0030 [69.7 kB]
Get:23 http://172.17.0.1/private/ stretch-staging/main fonts-dejavu-core all 2.35-1 [1064 kB]
Get:24 http://172.17.0.1/private/ stretch-staging/main fontconfig-config all 2.11.0-6.3 [273 kB]
Get:25 http://172.17.0.1/private/ stretch-staging/main libfontconfig1 armhf 2.11.0-6.3 [311 kB]
Get:26 http://172.17.0.1/private/ stretch-staging/main fontconfig armhf 2.11.0-6.3 [402 kB]
Get:27 http://172.17.0.1/private/ stretch-staging/main libisl13 armhf 0.14-2 [353 kB]
Get:28 http://172.17.0.1/private/ stretch-staging/main libmpfr4 armhf 3.1.3-1 [517 kB]
Get:29 http://172.17.0.1/private/ stretch-staging/main g++-4.9 armhf 4.9.3-2 [11.9 MB]
Get:30 http://172.17.0.1/private/ stretch-staging/main gcc-4.9 armhf 4.9.3-2 [4468 kB]
Get:31 http://172.17.0.1/private/ stretch-staging/main cpp-4.9 armhf 4.9.3-2 [4273 kB]
Get:32 http://172.17.0.1/private/ stretch-staging/main libgomp1 armhf 5.1.1-14+rpi1 [47.4 kB]
Get:33 http://172.17.0.1/private/ stretch-staging/main libatomic1 armhf 5.1.1-14+rpi1 [6720 B]
Get:34 http://172.17.0.1/private/ stretch-staging/main libubsan0 armhf 5.1.1-14+rpi1 [84.3 kB]
Get:35 http://172.17.0.1/private/ stretch-staging/main libstdc++-4.9-dev armhf 4.9.3-2 [1128 kB]
Get:36 http://172.17.0.1/private/ stretch-staging/main libgcc-4.9-dev armhf 4.9.3-2 [354 kB]
Get:37 http://172.17.0.1/private/ stretch-staging/main libasan1 armhf 4.9.3-2 [165 kB]
Get:38 http://172.17.0.1/private/ stretch-staging/main gcc-4.9-base armhf 4.9.3-2 [162 kB]
Get:39 http://172.17.0.1/private/ stretch-staging/main libasyncns0 armhf 0.8-5 [11.4 kB]
Get:40 http://172.17.0.1/private/ stretch-staging/main libffi6 armhf 3.2.1-3 [18.5 kB]
Get:41 http://172.17.0.1/private/ stretch-staging/main libglib2.0-0 armhf 2.44.1-1.1 [2312 kB]
Get:42 http://172.17.0.1/private/ stretch-staging/main libatk1.0-data all 2.16.0-2 [183 kB]
Get:43 http://172.17.0.1/private/ stretch-staging/main libatk1.0-0 armhf 2.16.0-2 [84.8 kB]
Get:44 http://172.17.0.1/private/ stretch-staging/main libxau6 armhf 1:1.0.8-1 [19.9 kB]
Get:45 http://172.17.0.1/private/ stretch-staging/main libxdmcp6 armhf 1:1.1.2-1 [25.0 kB]
Get:46 http://172.17.0.1/private/ stretch-staging/main libxcb1 armhf 1.10-3 [38.1 kB]
Get:47 http://172.17.0.1/private/ stretch-staging/main libx11-data all 2:1.6.3-1 [128 kB]
Get:48 http://172.17.0.1/private/ stretch-staging/main libx11-6 armhf 2:1.6.3-1 [678 kB]
Get:49 http://172.17.0.1/private/ stretch-staging/main libatspi2.0-0 armhf 2.16.0-1 [50.6 kB]
Get:50 http://172.17.0.1/private/ stretch-staging/main libatk-bridge2.0-0 armhf 2.16.0-1 [45.6 kB]
Get:51 http://172.17.0.1/private/ stretch-staging/main libavahi-common-data armhf 0.6.31-5 [98.8 kB]
Get:52 http://172.17.0.1/private/ stretch-staging/main libavahi-common3 armhf 0.6.31-5 [48.0 kB]
Get:53 http://172.17.0.1/private/ stretch-staging/main libavahi-client3 armhf 0.6.31-5 [50.6 kB]
Get:54 http://172.17.0.1/private/ stretch-staging/main liblcms2-2 armhf 2.6-3 [113 kB]
Get:55 http://172.17.0.1/private/ stretch-staging/main libcolord2 armhf 1.2.1-1+b3 [215 kB]
Get:56 http://172.17.0.1/private/ stretch-staging/main libcroco3 armhf 0.6.8-3 [121 kB]
Get:57 http://172.17.0.1/private/ stretch-staging/main libogg0 armhf 1.3.2-1 [17.2 kB]
Get:58 http://172.17.0.1/private/ stretch-staging/main libflac8 armhf 1.3.1-2 [145 kB]
Get:59 http://172.17.0.1/private/ stretch-staging/main libfontenc1 armhf 1:1.1.2-1 [23.9 kB]
Get:60 http://172.17.0.1/private/ stretch-staging/main libgif4 armhf 4.1.6-11 [40.4 kB]
Get:61 http://172.17.0.1/private/ stretch-staging/main libgraphite2-3 armhf 1.2.4-3 [48.2 kB]
Get:62 http://172.17.0.1/private/ stretch-staging/main x11-common all 1:7.7+9 [287 kB]
Get:63 http://172.17.0.1/private/ stretch-staging/main libice6 armhf 2:1.0.9-1 [51.2 kB]
Get:64 http://172.17.0.1/private/ stretch-staging/main libjpeg62-turbo armhf 1:1.4.0-7 [102 kB]
Get:65 http://172.17.0.1/private/ stretch-staging/main libjasper1 armhf 1.900.1-debian1-2.4 [109 kB]
Get:66 http://172.17.0.1/private/ stretch-staging/main libjbig0 armhf 2.1-3.1 [27.5 kB]
Get:67 http://172.17.0.1/private/ stretch-staging/main libltdl7 armhf 2.4.2-1.11 [42.5 kB]
Get:68 http://172.17.0.1/private/ stretch-staging/main libmpdec2 armhf 2.4.1-1 [65.8 kB]
Get:69 http://172.17.0.1/private/ stretch-staging/main libobjc4 armhf 5.1.1-14+rpi1 [90.4 kB]
Get:70 http://172.17.0.1/private/ stretch-staging/main libthai-data all 0.1.22-2 [161 kB]
Get:71 http://172.17.0.1/private/ stretch-staging/main libdatrie1 armhf 0.2.9-2 [31.5 kB]
Get:72 http://172.17.0.1/private/ stretch-staging/main libthai0 armhf 0.1.22-2 [44.8 kB]
Get:73 http://172.17.0.1/private/ stretch-staging/main libpango-1.0-0 armhf 1.36.8-3 [274 kB]
Get:74 http://172.17.0.1/private/ stretch-staging/main libpixman-1-0 armhf 0.32.6-3 [422 kB]
Get:75 http://172.17.0.1/private/ stretch-staging/main libxcb-render0 armhf 1.10-3 [16.0 kB]
Get:76 http://172.17.0.1/private/ stretch-staging/main libxcb-shm0 armhf 1.10-3 [11.0 kB]
Get:77 http://172.17.0.1/private/ stretch-staging/main libxext6 armhf 2:1.3.3-1 [48.1 kB]
Get:78 http://172.17.0.1/private/ stretch-staging/main libxrender1 armhf 1:0.9.8-1 [30.4 kB]
Get:79 http://172.17.0.1/private/ stretch-staging/main libcairo2 armhf 1.14.2-2 [672 kB]
Get:80 http://172.17.0.1/private/ stretch-staging/main libharfbuzz0b armhf 0.9.41-1 [488 kB]
Get:81 http://172.17.0.1/private/ stretch-staging/main libpangoft2-1.0-0 armhf 1.36.8-3 [207 kB]
Get:82 http://172.17.0.1/private/ stretch-staging/main libpangocairo-1.0-0 armhf 1.36.8-3 [197 kB]
Get:83 http://172.17.0.1/private/ stretch-staging/main libpcsclite1 armhf 1.8.13-1 [53.6 kB]
Get:84 http://172.17.0.1/private/ stretch-staging/main libproxy1 armhf 0.4.11-4 [55.6 kB]
Get:85 http://172.17.0.1/private/ stretch-staging/main libssl1.0.0 armhf 1.0.2d-1 [882 kB]
Get:86 http://172.17.0.1/private/ stretch-staging/main libpython3.4-minimal armhf 3.4.3-7 [487 kB]
Get:87 http://172.17.0.1/private/ stretch-staging/main mime-support all 3.58 [36.0 kB]
Get:88 http://172.17.0.1/private/ stretch-staging/main libsqlite3-0 armhf 3.8.10.2-1 [389 kB]
Get:89 http://172.17.0.1/private/ stretch-staging/main libpython3.4-stdlib armhf 3.4.3-7 [1983 kB]
Get:90 http://172.17.0.1/private/ stretch-staging/main libnettle6 armhf 3.1.1-3 [200 kB]
Get:91 http://172.17.0.1/private/ stretch-staging/main libhogweed4 armhf 3.1.1-3 [126 kB]
Get:92 http://172.17.0.1/private/ stretch-staging/main libp11-kit0 armhf 0.23.1-3 [94.2 kB]
Get:93 http://172.17.0.1/private/ stretch-staging/main libgnutls-deb0-28 armhf 3.3.16-1 [648 kB]
Get:94 http://172.17.0.1/private/ stretch-staging/main glib-networking-common all 2.44.0-2 [54.7 kB]
Get:95 http://172.17.0.1/private/ stretch-staging/main glib-networking-services armhf 2.44.0-2 [18.1 kB]
Get:96 http://172.17.0.1/private/ stretch-staging/main libdconf1 armhf 0.24.0-2 [31.9 kB]
Get:97 http://172.17.0.1/private/ stretch-staging/main dconf-service armhf 0.24.0-2 [38.7 kB]
Get:98 http://172.17.0.1/private/ stretch-staging/main dconf-gsettings-backend armhf 0.24.0-2 [30.7 kB]
Get:99 http://172.17.0.1/private/ stretch-staging/main gsettings-desktop-schemas all 3.16.1-1 [428 kB]
Get:100 http://172.17.0.1/private/ stretch-staging/main glib-networking armhf 2.44.0-2 [45.7 kB]
Get:101 http://172.17.0.1/private/ stretch-staging/main libsoup2.4-1 armhf 2.50.0-2 [231 kB]
Get:102 http://172.17.0.1/private/ stretch-staging/main libsoup-gnome2.4-1 armhf 2.50.0-2 [58.7 kB]
Get:103 http://172.17.0.1/private/ stretch-staging/main librest-0.7-0 armhf 0.7.93-1 [28.0 kB]
Get:104 http://172.17.0.1/private/ stretch-staging/main libsigsegv2 armhf 2.10-4 [28.2 kB]
Get:105 http://172.17.0.1/private/ stretch-staging/main libsm6 armhf 2:1.2.2-1 [31.2 kB]
Get:106 http://172.17.0.1/private/ stretch-staging/main libvorbis0a armhf 1.3.4-2 [82.7 kB]
Get:107 http://172.17.0.1/private/ stretch-staging/main libvorbisenc2 armhf 1.3.4-2 [72.0 kB]
Get:108 http://172.17.0.1/private/ stretch-staging/main libsndfile1 armhf 1.0.25-9.1 [204 kB]
Get:109 http://172.17.0.1/private/ stretch-staging/main libtiff5 armhf 4.0.3-13 [193 kB]
Get:110 http://172.17.0.1/private/ stretch-staging/main libunistring0 armhf 0.9.3-5.2 [253 kB]
Get:111 http://172.17.0.1/private/ stretch-staging/main libx11-xcb1 armhf 2:1.6.3-1 [176 kB]
Get:112 http://172.17.0.1/private/ stretch-staging/main libxt6 armhf 1:1.1.4-1 [183 kB]
Get:113 http://172.17.0.1/private/ stretch-staging/main libxmu6 armhf 2:1.1.2-1 [50.8 kB]
Get:114 http://172.17.0.1/private/ stretch-staging/main libxpm4 armhf 1:3.5.11-1 [41.7 kB]
Get:115 http://172.17.0.1/private/ stretch-staging/main libxaw7 armhf 2:1.0.12-2 [159 kB]
Get:116 http://172.17.0.1/private/ stretch-staging/main libxcb-dri2-0 armhf 1.10-3 [12.1 kB]
Get:117 http://172.17.0.1/private/ stretch-staging/main libxcb-dri3-0 armhf 1.10-3 [10.6 kB]
Get:118 http://172.17.0.1/private/ stretch-staging/main libxcb-glx0 armhf 1.10-3 [23.8 kB]
Get:119 http://172.17.0.1/private/ stretch-staging/main libxcb-present0 armhf 1.10-3 [10.8 kB]
Get:120 http://172.17.0.1/private/ stretch-staging/main libxcb-shape0 armhf 1.10-3 [11.0 kB]
Get:121 http://172.17.0.1/private/ stretch-staging/main libxcb-sync1 armhf 1.10-3 [13.2 kB]
Get:122 http://172.17.0.1/private/ stretch-staging/main libxcb-xfixes0 armhf 1.10-3 [13.8 kB]
Get:123 http://172.17.0.1/private/ stretch-staging/main libxcomposite1 armhf 1:0.4.4-1 [16.8 kB]
Get:124 http://172.17.0.1/private/ stretch-staging/main libxfixes3 armhf 1:5.0.1-2 [19.6 kB]
Get:125 http://172.17.0.1/private/ stretch-staging/main libxcursor1 armhf 1:1.1.14-1 [34.7 kB]
Get:126 http://172.17.0.1/private/ stretch-staging/main libxdamage1 armhf 1:1.1.4-2 [13.9 kB]
Get:127 http://172.17.0.1/private/ stretch-staging/main libxft2 armhf 2.3.2-1 [48.3 kB]
Get:128 http://172.17.0.1/private/ stretch-staging/main libxi6 armhf 2:1.7.4-1 [73.4 kB]
Get:129 http://172.17.0.1/private/ stretch-staging/main libxinerama1 armhf 2:1.1.3-1 [16.9 kB]
Get:130 http://172.17.0.1/private/ stretch-staging/main libxmuu1 armhf 2:1.1.2-1 [22.8 kB]
Get:131 http://172.17.0.1/private/ stretch-staging/main libxrandr2 armhf 2:1.4.2-1 [31.7 kB]
Get:132 http://172.17.0.1/private/ stretch-staging/main libxtst6 armhf 2:1.2.2-1 [26.8 kB]
Get:133 http://172.17.0.1/private/ stretch-staging/main libxv1 armhf 2:1.0.10-1 [22.2 kB]
Get:134 http://172.17.0.1/private/ stretch-staging/main libxxf86dga1 armhf 2:1.1.4-1 [22.4 kB]
Get:135 http://172.17.0.1/private/ stretch-staging/main libxxf86vm1 armhf 1:1.1.4-1 [20.2 kB]
Get:136 http://172.17.0.1/private/ stretch-staging/main openssl armhf 1.0.2d-1 [683 kB]
Get:137 http://172.17.0.1/private/ stretch-staging/main ca-certificates all 20150426 [208 kB]
Get:138 http://172.17.0.1/private/ stretch-staging/main java-common all 0.52 [136 kB]
Get:139 http://172.17.0.1/private/ stretch-staging/main default-jre-headless armhf 2:1.7-52 [9114 B]
Get:140 http://172.17.0.1/private/ stretch-staging/main libnspr4 armhf 2:4.10.8-2 [95.2 kB]
Get:141 http://172.17.0.1/private/ stretch-staging/main libnss3 armhf 2:3.19.2-1 [936 kB]
Get:142 http://172.17.0.1/private/ stretch-staging/main ca-certificates-java all 20140324 [13.7 kB]
Get:143 http://172.17.0.1/private/ stretch-staging/main tzdata all 2015e-1 [184 kB]
Get:144 http://172.17.0.1/private/ stretch-staging/main tzdata-java all 2015e-1 [78.5 kB]
Get:145 http://172.17.0.1/private/ stretch-staging/main libcups2 armhf 2.0.3-6 [264 kB]
Get:146 http://172.17.0.1/private/ stretch-staging/main libjson-c2 armhf 0.11-4 [22.7 kB]
Get:147 http://172.17.0.1/private/ stretch-staging/main libpulse0 armhf 6.0-2+b1 [229 kB]
Get:148 http://172.17.0.1/private/ stretch-staging/main openjdk-7-jre-headless armhf 7u79-2.5.5-1~deb8u1+rpi1 [37.6 MB]
Get:149 http://172.17.0.1/private/ stretch-staging/main python3.4-minimal armhf 3.4.3-7 [1142 kB]
Get:150 http://172.17.0.1/private/ stretch-staging/main python3-minimal armhf 3.4.3-4 [34.8 kB]
Get:151 http://172.17.0.1/private/ stretch-staging/main python3.4 armhf 3.4.3-7 [219 kB]
Get:152 http://172.17.0.1/private/ stretch-staging/main libpython3-stdlib armhf 3.4.3-4 [18.2 kB]
Get:153 http://172.17.0.1/private/ stretch-staging/main dh-python all 1.20150705-1 [66.7 kB]
Get:154 http://172.17.0.1/private/ stretch-staging/main python3 armhf 3.4.3-4 [21.3 kB]
Get:155 http://172.17.0.1/private/ stretch-staging/main libxapian22 armhf 1.2.21-1 [876 kB]
Get:156 http://172.17.0.1/private/ stretch-staging/main file armhf 1:5.22+15-2 [59.9 kB]
Get:157 http://172.17.0.1/private/ stretch-staging/main gettext-base armhf 0.19.4-1 [117 kB]
Get:158 http://172.17.0.1/private/ stretch-staging/main m4 armhf 1.4.17-4 [238 kB]
Get:159 http://172.17.0.1/private/ stretch-staging/main hicolor-icon-theme all 0.13-1 [8600 B]
Get:160 http://172.17.0.1/private/ stretch-staging/main libcairo-gobject2 armhf 1.14.2-2 [314 kB]
Get:161 http://172.17.0.1/private/ stretch-staging/main libepoxy0 armhf 1.2-1 [147 kB]
Get:162 http://172.17.0.1/private/ stretch-staging/main libgdk-pixbuf2.0-common all 2.31.4-2 [295 kB]
Get:163 http://172.17.0.1/private/ stretch-staging/main libgdk-pixbuf2.0-0 armhf 2.31.4-2 [149 kB]
Get:164 http://172.17.0.1/private/ stretch-staging/main libgtk-3-common all 3.16.5-1 [6218 kB]
Get:165 http://172.17.0.1/private/ stretch-staging/main libjson-glib-1.0-common all 1.0.4-1 [154 kB]
Get:166 http://172.17.0.1/private/ stretch-staging/main libjson-glib-1.0-0 armhf 1.0.4-1 [156 kB]
Get:167 http://172.17.0.1/private/ stretch-staging/main libwayland-client0 armhf 1.8.1-1 [19.4 kB]
Get:168 http://172.17.0.1/private/ stretch-staging/main libwayland-cursor0 armhf 1.8.1-1 [11.7 kB]
Get:169 http://172.17.0.1/private/ stretch-staging/main libwayland-server0 armhf 1.8.1-1 [23.4 kB]
Get:170 http://172.17.0.1/private/ stretch-staging/main libgbm1 armhf 10.5.9-2 [54.5 kB]
Get:171 http://172.17.0.1/private/ stretch-staging/main libegl1-mesa armhf 10.5.9-2 [87.2 kB]
Get:172 http://172.17.0.1/private/ stretch-staging/main libwayland-egl1-mesa armhf 10.5.9-2 [39.7 kB]
Get:173 http://172.17.0.1/private/ stretch-staging/main xkb-data all 2.14-1 [614 kB]
Get:174 http://172.17.0.1/private/ stretch-staging/main libxkbcommon0 armhf 0.5.0-1 [109 kB]
Get:175 http://172.17.0.1/private/ stretch-staging/main shared-mime-info armhf 1.3-1 [630 kB]
Get:176 http://172.17.0.1/private/ stretch-staging/main libgtk-3-0 armhf 3.16.5-1 [4866 kB]
Get:177 http://172.17.0.1/private/ stretch-staging/main libgtk-3-bin armhf 3.16.5-1 [3007 kB]
Get:178 http://172.17.0.1/private/ stretch-staging/main librsvg2-2 armhf 2.40.9-2 [240 kB]
Get:179 http://172.17.0.1/private/ stretch-staging/main librsvg2-common armhf 2.40.9-2 [177 kB]
Get:180 http://172.17.0.1/private/ stretch-staging/main adwaita-icon-theme all 3.16.2.1-2 [10.8 MB]
Get:181 http://172.17.0.1/private/ stretch-staging/main ant all 1.9.6-1 [1900 kB]
Get:182 http://172.17.0.1/private/ stretch-staging/main autoconf all 2.69-8 [340 kB]
Get:183 http://172.17.0.1/private/ stretch-staging/main autotools-dev all 20140911.1 [70.5 kB]
Get:184 http://172.17.0.1/private/ stretch-staging/main automake all 1:1.15-2 [735 kB]
Get:185 http://172.17.0.1/private/ stretch-staging/main autopoint all 0.19.4-1 [415 kB]
Get:186 http://172.17.0.1/private/ stretch-staging/main dctrl-tools armhf 2.24-1 [136 kB]
Get:187 http://172.17.0.1/private/ stretch-staging/main gettext armhf 0.19.4-1 [1168 kB]
Get:188 http://172.17.0.1/private/ stretch-staging/main intltool-debian all 0.35.0+20060710.2 [25.9 kB]
Get:189 http://172.17.0.1/private/ stretch-staging/main po-debconf all 1.0.18 [248 kB]
Get:190 http://172.17.0.1/private/ stretch-staging/main debhelper all 9.20150628 [817 kB]
Get:191 http://172.17.0.1/private/ stretch-staging/main libasound2-data all 1.0.29-1 [67.1 kB]
Get:192 http://172.17.0.1/private/ stretch-staging/main libasound2 armhf 1.0.29-1 [324 kB]
Get:193 http://172.17.0.1/private/ stretch-staging/main libgtk2.0-common all 2.24.28-1 [3140 kB]
Get:194 http://172.17.0.1/private/ stretch-staging/main libgtk2.0-0 armhf 2.24.28-1 [2017 kB]
Get:195 http://172.17.0.1/private/ stretch-staging/main libglapi-mesa armhf 10.5.9-2 [67.7 kB]
Get:196 http://172.17.0.1/private/ stretch-staging/main libxshmfence1 armhf 1.2-1 [7642 B]
Get:197 http://172.17.0.1/private/ stretch-staging/main libgl1-mesa-glx armhf 10.5.9-2 [172 kB]
Get:198 http://172.17.0.1/private/ stretch-staging/main x11-utils armhf 7.7+3 [175 kB]
Get:199 http://172.17.0.1/private/ stretch-staging/main libatk-wrapper-java all 0.33.0-2 [38.2 kB]
Get:200 http://172.17.0.1/private/ stretch-staging/main libatk-wrapper-java-jni armhf 0.33.0-2 [27.8 kB]
Get:201 http://172.17.0.1/private/ stretch-staging/main openjdk-7-jre armhf 7u79-2.5.5-1~deb8u1+rpi1 [152 kB]
Get:202 http://172.17.0.1/private/ stretch-staging/main default-jre armhf 2:1.7-52 [966 B]
Get:203 http://172.17.0.1/private/ stretch-staging/main openjdk-7-jdk armhf 7u79-2.5.5-1~deb8u1+rpi1 [13.7 MB]
Get:204 http://172.17.0.1/private/ stretch-staging/main default-jdk armhf 2:1.7-52 [966 B]
Get:205 http://172.17.0.1/private/ stretch-staging/main devscripts armhf 2.15.5 [907 kB]
Get:206 http://172.17.0.1/private/ stretch-staging/main libtool all 2.4.2-1.11 [190 kB]
Get:207 http://172.17.0.1/private/ stretch-staging/main dh-autoreconf all 10 [15.2 kB]
Get:208 http://172.17.0.1/private/ stretch-staging/main dh-linktree all 0.4 [10.3 kB]
Get:209 http://172.17.0.1/private/ stretch-staging/main libllvm3.5 armhf 1:3.5.2-1 [6643 kB]
Get:210 http://172.17.0.1/private/ stretch-staging/main libobjc-4.9-dev armhf 4.9.3-2 [344 kB]
Get:211 http://172.17.0.1/private/ stretch-staging/main libclang1-3.5 armhf 1:3.5.2-1 [2959 kB]
Get:212 http://172.17.0.1/private/ stretch-staging/main doxygen armhf 1.8.9.1-3 [2561 kB]
Get:213 http://172.17.0.1/private/ stretch-staging/main libcdt5 armhf 2.38.0-10 [60.3 kB]
Get:214 http://172.17.0.1/private/ stretch-staging/main libcgraph6 armhf 2.38.0-10 [78.6 kB]
Get:215 http://172.17.0.1/private/ stretch-staging/main libvpx2 armhf 1.4.0-4+rpi1 [409 kB]
Get:216 http://172.17.0.1/private/ stretch-staging/main libgd3 armhf 2.1.1-1+b1 [127 kB]
Get:217 http://172.17.0.1/private/ stretch-staging/main libpathplan4 armhf 2.38.0-10 [63.4 kB]
Get:218 http://172.17.0.1/private/ stretch-staging/main libxdot4 armhf 2.38.0-10 [57.6 kB]
Get:219 http://172.17.0.1/private/ stretch-staging/main libgvc6 armhf 2.38.0-10 [534 kB]
Get:220 http://172.17.0.1/private/ stretch-staging/main libgvpr2 armhf 2.38.0-10 [191 kB]
Get:221 http://172.17.0.1/private/ stretch-staging/main graphviz armhf 2.38.0-10 [650 kB]
Get:222 http://172.17.0.1/private/ stretch-staging/main libarchive-zip-perl all 1.48-1 [96.8 kB]
Get:223 http://172.17.0.1/private/ stretch-staging/main javahelper all 0.52 [84.4 kB]
Get:224 http://172.17.0.1/private/ stretch-staging/main libjs-jquery all 1.7.2+dfsg-3.2 [97.5 kB]
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Setting up libxcb1:armhf (1.10-3) ...
Setting up libx11-data (2:1.6.3-1) ...
Setting up libx11-6:armhf (2:1.6.3-1) ...
Setting up libatspi2.0-0:armhf (2.16.0-1) ...
Setting up libatk-bridge2.0-0:armhf (2.16.0-1) ...
Setting up libavahi-common-data:armhf (0.6.31-5) ...
Setting up libavahi-common3:armhf (0.6.31-5) ...
Setting up libavahi-client3:armhf (0.6.31-5) ...
Setting up liblcms2-2:armhf (2.6-3) ...
Setting up libcolord2:armhf (1.2.1-1+b3) ...
Setting up libcroco3:armhf (0.6.8-3) ...
Setting up libogg0:armhf (1.3.2-1) ...
Setting up libflac8:armhf (1.3.1-2) ...
Setting up libfontenc1:armhf (1:1.1.2-1) ...
Setting up libgif4:armhf (4.1.6-11) ...
Setting up libgraphite2-3:armhf (1.2.4-3) ...
Setting up x11-common (1:7.7+9) ...
update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
Setting up libice6:armhf (2:1.0.9-1) ...
Setting up libjpeg62-turbo:armhf (1:1.4.0-7) ...
Setting up libjasper1:armhf (1.900.1-debian1-2.4) ...
Setting up libjbig0:armhf (2.1-3.1) ...
Setting up libltdl7:armhf (2.4.2-1.11) ...
Setting up libmpdec2:armhf (2.4.1-1) ...
Setting up libobjc4:armhf (5.1.1-14+rpi1) ...
Setting up libthai-data (0.1.22-2) ...
Setting up libdatrie1:armhf (0.2.9-2) ...
Setting up libthai0:armhf (0.1.22-2) ...
Setting up libpango-1.0-0:armhf (1.36.8-3) ...
Setting up libpixman-1-0:armhf (0.32.6-3) ...
Setting up libxcb-render0:armhf (1.10-3) ...
Setting up libxcb-shm0:armhf (1.10-3) ...
Setting up libxext6:armhf (2:1.3.3-1) ...
Setting up libxrender1:armhf (1:0.9.8-1) ...
Setting up libcairo2:armhf (1.14.2-2) ...
Setting up libharfbuzz0b:armhf (0.9.41-1) ...
Setting up libpangoft2-1.0-0:armhf (1.36.8-3) ...
Setting up libpangocairo-1.0-0:armhf (1.36.8-3) ...
Setting up libpcsclite1:armhf (1.8.13-1) ...
Setting up libproxy1:armhf (0.4.11-4) ...
Setting up mime-support (3.58) ...
Setting up libsqlite3-0:armhf (3.8.10.2-1) ...
Setting up libpython3.4-stdlib:armhf (3.4.3-7) ...
Setting up libnettle6:armhf (3.1.1-3) ...
Setting up libhogweed4:armhf (3.1.1-3) ...
Setting up libp11-kit0:armhf (0.23.1-3) ...
Setting up libgnutls-deb0-28:armhf (3.3.16-1) ...
Setting up glib-networking-common (2.44.0-2) ...
Setting up glib-networking-services (2.44.0-2) ...
Setting up libdconf1:armhf (0.24.0-2) ...
Setting up dconf-service (0.24.0-2) ...
Setting up dconf-gsettings-backend:armhf (0.24.0-2) ...
Setting up gsettings-desktop-schemas (3.16.1-1) ...
Setting up glib-networking:armhf (2.44.0-2) ...
Setting up libsoup2.4-1:armhf (2.50.0-2) ...
Setting up libsoup-gnome2.4-1:armhf (2.50.0-2) ...
Setting up librest-0.7-0:armhf (0.7.93-1) ...
Setting up libsigsegv2:armhf (2.10-4) ...
Setting up libsm6:armhf (2:1.2.2-1) ...
Setting up libvorbis0a:armhf (1.3.4-2) ...
Setting up libvorbisenc2:armhf (1.3.4-2) ...
Setting up libsndfile1:armhf (1.0.25-9.1) ...
Setting up libtiff5:armhf (4.0.3-13) ...
Setting up libunistring0:armhf (0.9.3-5.2) ...
Setting up libx11-xcb1:armhf (2:1.6.3-1) ...
Setting up libxt6:armhf (1:1.1.4-1) ...
Setting up libxmu6:armhf (2:1.1.2-1) ...
Setting up libxpm4:armhf (1:3.5.11-1) ...
Setting up libxaw7:armhf (2:1.0.12-2) ...
Setting up libxcb-dri2-0:armhf (1.10-3) ...
Setting up libxcb-dri3-0:armhf (1.10-3) ...
Setting up libxcb-glx0:armhf (1.10-3) ...
Setting up libxcb-present0:armhf (1.10-3) ...
Setting up libxcb-shape0:armhf (1.10-3) ...
Setting up libxcb-sync1:armhf (1.10-3) ...
Setting up libxcb-xfixes0:armhf (1.10-3) ...
Setting up libxcomposite1:armhf (1:0.4.4-1) ...
Setting up libxfixes3:armhf (1:5.0.1-2) ...
Setting up libxcursor1:armhf (1:1.1.14-1) ...
Setting up libxdamage1:armhf (1:1.1.4-2) ...
Setting up libxft2:armhf (2.3.2-1) ...
Setting up libxi6:armhf (2:1.7.4-1) ...
Setting up libxinerama1:armhf (2:1.1.3-1) ...
Setting up libxmuu1:armhf (2:1.1.2-1) ...
Setting up libxrandr2:armhf (2:1.4.2-1) ...
Setting up libxtst6:armhf (2:1.2.2-1) ...
Setting up libxv1:armhf (2:1.0.10-1) ...
Setting up libxxf86dga1:armhf (2:1.1.4-1) ...
Setting up libxxf86vm1:armhf (1:1.1.4-1) ...
Setting up openssl (1.0.2d-1) ...
Setting up ca-certificates (20150426) ...
Setting up java-common (0.52) ...
Setting up libnspr4:armhf (2:4.10.8-2) ...
Setting up libnss3:armhf (2:3.19.2-1) ...
Setting up tzdata-java (2015e-1) ...
Setting up libcups2:armhf (2.0.3-6) ...
Setting up libjson-c2:armhf (0.11-4) ...
Setting up libpulse0:armhf (6.0-2+b1) ...
Setting up python3.4 (3.4.3-7) ...
Setting up libpython3-stdlib:armhf (3.4.3-4) ...
Setting up libxapian22 (1.2.21-1) ...
Setting up file (1:5.22+15-2) ...
Setting up gettext-base (0.19.4-1) ...
Setting up m4 (1.4.17-4) ...
Setting up hicolor-icon-theme (0.13-1) ...
Setting up libcairo-gobject2:armhf (1.14.2-2) ...
Setting up libepoxy0 (1.2-1) ...
Setting up libgdk-pixbuf2.0-common (2.31.4-2) ...
Setting up libgdk-pixbuf2.0-0:armhf (2.31.4-2) ...
Setting up libjson-glib-1.0-common (1.0.4-1) ...
Setting up libjson-glib-1.0-0:armhf (1.0.4-1) ...
Setting up libwayland-client0:armhf (1.8.1-1) ...
Setting up libwayland-cursor0:armhf (1.8.1-1) ...
Setting up libwayland-server0:armhf (1.8.1-1) ...
Setting up libgbm1:armhf (10.5.9-2) ...
Setting up libegl1-mesa:armhf (10.5.9-2) ...
Setting up libwayland-egl1-mesa:armhf (10.5.9-2) ...
Setting up xkb-data (2.14-1) ...
Setting up libxkbcommon0:armhf (0.5.0-1) ...
Setting up shared-mime-info (1.3-1) ...
Setting up librsvg2-2:armhf (2.40.9-2) ...
Setting up librsvg2-common:armhf (2.40.9-2) ...
Setting up autoconf (2.69-8) ...
Setting up autotools-dev (20140911.1) ...
Setting up automake (1:1.15-2) ...
update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode
Setting up autopoint (0.19.4-1) ...
Setting up dctrl-tools (2.24-1) ...
Setting up gettext (0.19.4-1) ...
Setting up intltool-debian (0.35.0+20060710.2) ...
Setting up po-debconf (1.0.18) ...
Setting up debhelper (9.20150628) ...
Setting up libasound2-data (1.0.29-1) ...
Setting up libasound2:armhf (1.0.29-1) ...
Setting up libgtk2.0-common (2.24.28-1) ...
Setting up libgtk2.0-0:armhf (2.24.28-1) ...
Setting up libglapi-mesa:armhf (10.5.9-2) ...
Setting up libxshmfence1:armhf (1.2-1) ...
Setting up libgl1-mesa-glx:armhf (10.5.9-2) ...
Setting up x11-utils (7.7+3) ...
Setting up libatk-wrapper-java (0.33.0-2) ...
Setting up libtool (2.4.2-1.11) ...
Setting up dh-autoreconf (10) ...
Setting up dh-linktree (0.4) ...
Setting up libllvm3.5:armhf (1:3.5.2-1) ...
Setting up libobjc-4.9-dev:armhf (4.9.3-2) ...
Setting up libclang1-3.5:armhf (1:3.5.2-1) ...
Setting up doxygen (1.8.9.1-3) ...
Setting up libcdt5 (2.38.0-10) ...
Setting up libcgraph6 (2.38.0-10) ...
Setting up libvpx2:armhf (1.4.0-4+rpi1) ...
Setting up libgd3:armhf (2.1.1-1+b1) ...
Setting up libpathplan4 (2.38.0-10) ...
Setting up libxdot4 (2.38.0-10) ...
Setting up libgvc6 (2.38.0-10) ...
Setting up libgvpr2 (2.38.0-10) ...
Setting up graphviz (2.38.0-10) ...
Setting up libarchive-zip-perl (1.48-1) ...
Setting up libjs-jquery (1.7.2+dfsg-3.2) ...
Setting up ca-certificates-java (20140324) ...
done.
Setting up default-jre-headless (2:1.7-52) ...
Setting up dh-python (1.20150705-1) ...
Setting up python3 (3.4.3-4) ...
Setting up libgtk-3-common (3.16.5-1) ...
Setting up libgtk-3-0:armhf (3.16.5-1) ...
Setting up ant (1.9.6-1) ...
Setting up libatk-wrapper-java-jni:armhf (0.33.0-2) ...
Setting up devscripts (2.15.5) ...
Setting up javahelper (0.52) ...
Setting up libgtk-3-bin (3.16.5-1) ...
Setting up adwaita-icon-theme (3.16.2.1-2) ...
Processing triggers for ca-certificates (20150426) ...
Updating certificates in /etc/ssl/certs...
180 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...

Adding debian:A-Trust-nQual-03.pem
Adding debian:ACCVRAIZ1.pem
Adding debian:ACEDICOM_Root.pem
Adding debian:AC_Raíz_Certicámara_S.A..pem
Adding debian:Actalis_Authentication_Root_CA.pem
Adding debian:AddTrust_External_Root.pem
Adding debian:AddTrust_Low-Value_Services_Root.pem
Adding debian:AddTrust_Public_Services_Root.pem
Adding debian:AddTrust_Qualified_Certificates_Root.pem
Adding debian:AffirmTrust_Commercial.pem
Adding debian:AffirmTrust_Networking.pem
Adding debian:AffirmTrust_Premium.pem
Adding debian:AffirmTrust_Premium_ECC.pem
Adding debian:ApplicationCA_-_Japanese_Government.pem
Adding debian:Atos_TrustedRoot_2011.pem
Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem
Adding debian:Baltimore_CyberTrust_Root.pem
Adding debian:Buypass_Class_2_CA_1.pem
Adding debian:Buypass_Class_2_Root_CA.pem
Adding debian:Buypass_Class_3_CA_1.pem
Adding debian:Buypass_Class_3_Root_CA.pem
Adding debian:CA_Disig.pem
Adding debian:CA_Disig_Root_R1.pem
Adding debian:CA_Disig_Root_R2.pem
Adding debian:CFCA_EV_ROOT.pem
Adding debian:CNNIC_ROOT.pem
Adding debian:COMODO_Certification_Authority.pem
Adding debian:COMODO_ECC_Certification_Authority.pem
Adding debian:COMODO_RSA_Certification_Authority.pem
Adding debian:Camerfirma_Chambers_of_Commerce_Root.pem
Adding debian:Camerfirma_Global_Chambersign_Root.pem
Adding debian:Certigna.pem
Adding debian:Certinomis_-_Autorité_Racine.pem
Adding debian:Certplus_Class_2_Primary_CA.pem
Adding debian:Certum_Root_CA.pem
Adding debian:Certum_Trusted_Network_CA.pem
Adding debian:Chambers_of_Commerce_Root_-_2008.pem
Adding debian:China_Internet_Network_Information_Center_EV_Certificates_Root.pem
Adding debian:ComSign_CA.pem
Adding debian:ComSign_Secured_CA.pem
Adding debian:Comodo_AAA_Services_root.pem
Adding debian:Comodo_Secure_Services_root.pem
Adding debian:Comodo_Trusted_Services_root.pem
Adding debian:Cybertrust_Global_Root.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem
Adding debian:DST_ACES_CA_X6.pem
Adding debian:DST_Root_CA_X3.pem
Adding debian:Deutsche_Telekom_Root_CA_2.pem
Adding debian:DigiCert_Assured_ID_Root_CA.pem
Adding debian:DigiCert_Assured_ID_Root_G2.pem
Adding debian:DigiCert_Assured_ID_Root_G3.pem
Adding debian:DigiCert_Global_Root_CA.pem
Adding debian:DigiCert_Global_Root_G2.pem
Adding debian:DigiCert_Global_Root_G3.pem
Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem
Adding debian:DigiCert_Trusted_Root_G4.pem
Adding debian:Digital_Signature_Trust_Co._Global_CA_1.pem
Adding debian:Digital_Signature_Trust_Co._Global_CA_3.pem
Adding debian:E-Tugra_Certification_Authority.pem
Adding debian:EBG_Elektronik_Sertifika_Hizmet_Sağlayıcısı.pem
Adding debian:EC-ACC.pem
Adding debian:EE_Certification_Centre_Root_CA.pem
Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem
Adding debian:Entrust_Root_Certification_Authority.pem
Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem
Adding debian:Entrust_Root_Certification_Authority_-_G2.pem
Adding debian:Equifax_Secure_CA.pem
Adding debian:Equifax_Secure_Global_eBusiness_CA.pem
Adding debian:Equifax_Secure_eBusiness_CA_1.pem
Adding debian:GeoTrust_Global_CA.pem
Adding debian:GeoTrust_Global_CA_2.pem
Adding debian:GeoTrust_Primary_Certification_Authority.pem
Adding debian:GeoTrust_Primary_Certification_Authority_-_G2.pem
Adding debian:GeoTrust_Primary_Certification_Authority_-_G3.pem
Adding debian:GeoTrust_Universal_CA.pem
Adding debian:GeoTrust_Universal_CA_2.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem
Adding debian:GlobalSign_Root_CA.pem
Adding debian:GlobalSign_Root_CA_-_R2.pem
Adding debian:GlobalSign_Root_CA_-_R3.pem
Adding debian:Global_Chambersign_Root_-_2008.pem
Adding debian:Go_Daddy_Class_2_CA.pem
Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2011.pem
Adding debian:Hongkong_Post_Root_CA_1.pem
Adding debian:IGC_A.pem
Adding debian:IdenTrust_Commercial_Root_CA_1.pem
Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem
Adding debian:Izenpe.com.pem
Adding debian:Juur-SK.pem
Adding debian:Microsec_e-Szigno_Root_CA.pem
Adding debian:Microsec_e-Szigno_Root_CA_2009.pem
Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem
Adding debian:NetLock_Business_=Class_B=_Root.pem
Adding debian:NetLock_Express_=Class_C=_Root.pem
Adding debian:NetLock_Notary_=Class_A=_Root.pem
Adding debian:NetLock_Qualified_=Class_QA=_Root.pem
Adding debian:Network_Solutions_Certificate_Authority.pem
Adding debian:OISTE_WISeKey_Global_Root_GA_CA.pem
Adding debian:PSCProcert.pem
Adding debian:QuoVadis_Root_CA.pem
Adding debian:QuoVadis_Root_CA_1_G3.pem
Adding debian:QuoVadis_Root_CA_2.pem
Adding debian:QuoVadis_Root_CA_2_G3.pem
Adding debian:QuoVadis_Root_CA_3.pem
Adding debian:QuoVadis_Root_CA_3_G3.pem
Adding debian:RSA_Security_2048_v3.pem
Adding debian:Root_CA_Generalitat_Valenciana.pem
Adding debian:S-TRUST_Authentication_and_Encryption_Root_CA_2005_PN.pem
Adding debian:S-TRUST_Universal_Root_CA.pem
Adding debian:SG_TRUST_SERVICES_RACINE.pem
Adding debian:SecureSign_RootCA11.pem
Adding debian:SecureTrust_CA.pem
Adding debian:Secure_Global_CA.pem
Adding debian:Security_Communication_EV_RootCA1.pem
Adding debian:Security_Communication_RootCA2.pem
Adding debian:Security_Communication_Root_CA.pem
Adding debian:Sonera_Class_1_Root_CA.pem
Adding debian:Sonera_Class_2_Root_CA.pem
Adding debian:Staat_der_Nederlanden_EV_Root_CA.pem
Adding debian:Staat_der_Nederlanden_Root_CA.pem
Adding debian:Staat_der_Nederlanden_Root_CA_-_G2.pem
Adding debian:Staat_der_Nederlanden_Root_CA_-_G3.pem
Adding debian:Starfield_Class_2_CA.pem
Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem
Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem
Adding debian:StartCom_Certification_Authority.pem
Adding debian:StartCom_Certification_Authority_2.pem
Adding debian:StartCom_Certification_Authority_G2.pem
Adding debian:SwissSign_Gold_CA_-_G2.pem
Adding debian:SwissSign_Platinum_CA_-_G2.pem
Adding debian:SwissSign_Silver_CA_-_G2.pem
Adding debian:Swisscom_Root_CA_1.pem
Adding debian:Swisscom_Root_CA_2.pem
Adding debian:Swisscom_Root_EV_CA_2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_3.pem
Adding debian:TC_TrustCenter_Class_2_CA_II.pem
Adding debian:TC_TrustCenter_Class_3_CA_II.pem
Adding debian:TC_TrustCenter_Universal_CA_I.pem
Adding debian:TURKTRUST_Certificate_Services_Provider_Root_1.pem
Adding debian:TURKTRUST_Certificate_Services_Provider_Root_2.pem
Adding debian:TURKTRUST_Certificate_Services_Provider_Root_2007.pem
Adding debian:TWCA_Global_Root_CA.pem
Adding debian:TWCA_Root_Certification_Authority.pem
Adding debian:Taiwan_GRCA.pem
Adding debian:TeliaSonera_Root_CA_v1.pem
Adding debian:Trustis_FPS_Root_CA.pem
Adding debian:TÜBİTAK_UEKAE_Kök_Sertifika_Hizmet_Sağlayıcısı_-_Sürüm_3.pem
Adding debian:USERTrust_ECC_Certification_Authority.pem
Adding debian:USERTrust_RSA_Certification_Authority.pem
Adding debian:UTN_DATACorp_SGC_Root_CA.pem
Adding debian:UTN_USERFirst_Email_Root_CA.pem
Adding debian:UTN_USERFirst_Hardware_Root_CA.pem
Adding debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G4.pem
Adding debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G5.pem
Adding debian:VeriSign_Universal_Root_Certification_Authority.pem
Adding debian:Verisign_Class_1_Public_Primary_Certification_Authority.pem
Adding debian:Verisign_Class_1_Public_Primary_Certification_Authority_-_G2.pem
Adding debian:Verisign_Class_1_Public_Primary_Certification_Authority_-_G3.pem
Adding debian:Verisign_Class_2_Public_Primary_Certification_Authority_-_G2.pem
Adding debian:Verisign_Class_2_Public_Primary_Certification_Authority_-_G3.pem
Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority.pem
Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority_-_G2.pem
Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority_-_G3.pem
Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority_2.pem
Adding debian:Verisign_Class_4_Public_Primary_Certification_Authority_-_G3.pem
Adding debian:Visa_eCommerce_Root.pem
Adding debian:WellsSecure_Public_Root_Certificate_Authority.pem
Adding debian:WoSign.pem
Adding debian:WoSign_China.pem
Adding debian:XRamp_Global_CA_Root.pem
Adding debian:certSIGN_ROOT_CA.pem
Adding debian:ePKI_Root_Certification_Authority.pem
Adding debian:thawte_Primary_Root_CA.pem
Adding debian:thawte_Primary_Root_CA_-_G2.pem
Adding debian:thawte_Primary_Root_CA_-_G3.pem
Adding debian:spi-cacert-2008.pem
done.
done.
Setting up openjdk-7-jre-headless:armhf (7u79-2.5.5-1~deb8u1+rpi1) ...
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/jre/bin/rmid to provide /usr/bin/rmid (rmid) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/jre/bin/java to provide /usr/bin/java (java) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/jre/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/jre/bin/pack200 to provide /usr/bin/pack200 (pack200) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/jre/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/jre/bin/unpack200 to provide /usr/bin/unpack200 (unpack200) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/jre/bin/orbd to provide /usr/bin/orbd (orbd) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/jre/bin/servertool to provide /usr/bin/servertool (servertool) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/jre/bin/tnameserv to provide /usr/bin/tnameserv (tnameserv) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/jre/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode
Setting up openjdk-7-jre:armhf (7u79-2.5.5-1~deb8u1+rpi1) ...
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/jre/bin/policytool to provide /usr/bin/policytool (policytool) in auto mode
Setting up default-jre (2:1.7-52) ...
Setting up openjdk-7-jdk:armhf (7u79-2.5.5-1~deb8u1+rpi1) ...
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/idlj to provide /usr/bin/idlj (idlj) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/wsimport to provide /usr/bin/wsimport (wsimport) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/rmic to provide /usr/bin/rmic (rmic) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/jsadebugd to provide /usr/bin/jsadebugd (jsadebugd) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/native2ascii to provide /usr/bin/native2ascii (native2ascii) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/javac to provide /usr/bin/javac (javac) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/javah to provide /usr/bin/javah (javah) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/jps to provide /usr/bin/jps (jps) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/javap to provide /usr/bin/javap (javap) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/jar to provide /usr/bin/jar (jar) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/xjc to provide /usr/bin/xjc (xjc) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/schemagen to provide /usr/bin/schemagen (schemagen) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/extcheck to provide /usr/bin/extcheck (extcheck) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/appletviewer to provide /usr/bin/appletviewer (appletviewer) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/jhat to provide /usr/bin/jhat (jhat) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/wsgen to provide /usr/bin/wsgen (wsgen) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode
Setting up default-jdk (2:1.7-52) ...
Setting up sbuild-build-depends-libhmsbeagle-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.19-18) ...
Processing triggers for systemd (215-17) ...
Processing triggers for libgdk-pixbuf2.0-0:armhf (2.31.4-2) ...

┌──────────────────────────────────────────────────────────────────────────────┐
│ Build environment                                                            │
└──────────────────────────────────────────────────────────────────────────────┘

Kernel: Linux 3.19.0-trunk-armmp armhf (armv7l)
Toolchain package versions: binutils_2.25-5 dpkg-dev_1.17.25 g++-4.9_4.9.3-2 gcc-4.9_4.9.3-2 libc6-dev_2.19-18 libstdc++-4.9-dev_4.9.3-2 libstdc++6_5.1.1-14+rpi1 linux-libc-dev_3.16.7-ckt4-1+rpi1
Package versions: acl_2.2.52-2 adduser_3.113+nmu3 adwaita-icon-theme_3.16.2.1-2 ant_1.9.6-1 apt_1.0.9.8 autoconf_2.69-8 automake_1:1.15-2 autopoint_0.19.4-1 autotools-dev_20140911.1 base-files_8+rpi1 base-passwd_3.5.37 bash_4.3-11 binutils_2.25-5 bsdmainutils_9.0.6 bsdutils_1:2.25.2-6 build-essential_11.7 bzip2_1.0.6-7 ca-certificates_20150426 ca-certificates-java_20140324 coreutils_8.23-4 cpio_2.11+dfsg-4.1 cpp_4:4.9.2-2 cpp-4.9_4.9.3-2 dash_0.5.7-4 dconf-gsettings-backend_0.24.0-2 dconf-service_0.24.0-2 dctrl-tools_2.24-1 debconf_1.5.56 debconf-i18n_1.5.56 debfoster_2.7-2 debhelper_9.20150628 debianutils_4.4 default-jdk_2:1.7-52 default-jre_2:1.7-52 default-jre-headless_2:1.7-52 devscripts_2.15.5 dh-autoreconf_10 dh-linktree_0.4 dh-python_1.20150705-1 diffutils_1:3.3-1 dmsetup_2:1.02.90-2.2 doxygen_1.8.9.1-3 dpkg_1.17.25 dpkg-dev_1.17.25 e2fslibs_1.42.12-1.1 e2fsprogs_1.42.12-1.1 fakeroot_1.20.2-1 file_1:5.22+15-2 findutils_4.4.2-9 fontconfig_2.11.0-6.3 fontconfig-config_2.11.0-6.3 fonts-dejavu-core_2.35-1 g++_4:4.9.2-2 g++-4.9_4.9.3-2 gcc_4:4.9.2-2 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.4-1 gcc-4.9_4.9.3-2 gcc-4.9-base_4.9.3-2 gcc-5-base_5.1.1-14+rpi1 gettext_0.19.4-1 gettext-base_0.19.4-1 glib-networking_2.44.0-2 glib-networking-common_2.44.0-2 glib-networking-services_2.44.0-2 gnupg_1.4.18-7 gpgv_1.4.18-7 graphviz_2.38.0-10 grep_2.20-4.1 groff-base_1.22.3-1 gsettings-desktop-schemas_3.16.1-1 gzip_1.6-4 hicolor-icon-theme_0.13-1 hostname_3.15 init_1.22 init-system-helpers_1.22 initramfs-tools_0.120 initscripts_2.88dsf-59 insserv_1.14.0-5 intltool-debian_0.35.0+20060710.2 java-common_0.52 javahelper_0.52 klibc-utils_2.0.4-2+rpi1 kmod_18-3 libacl1_2.2.52-2 libapt-pkg4.12_1.0.9.8 libarchive-zip-perl_1.48-1 libasan1_4.9.3-2 libasound2_1.0.29-1 libasound2-data_1.0.29-1 libasprintf0c2_0.19.4-1 libasyncns0_0.8-5 libatk-bridge2.0-0_2.16.0-1 libatk-wrapper-java_0.33.0-2 libatk-wrapper-java-jni_0.33.0-2 libatk1.0-0_2.16.0-2 libatk1.0-data_2.16.0-2 libatomic1_5.1.1-14+rpi1 libatspi2.0-0_2.16.0-1 libattr1_1:2.4.47-2 libaudit-common_1:2.4-1 libaudit1_1:2.4-1 libavahi-client3_0.6.31-5 libavahi-common-data_0.6.31-5 libavahi-common3_0.6.31-5 libblkid1_2.25.2-6 libbsd0_0.7.0-2 libbz2-1.0_1.0.6-7 libc-bin_2.19-18 libc-dev-bin_2.19-18 libc6_2.19-18 libc6-dev_2.19-18 libcairo-gobject2_1.14.2-2 libcairo2_1.14.2-2 libcap2_1:2.24-8 libcap2-bin_1:2.24-8 libcdt5_2.38.0-10 libcgraph6_2.38.0-10 libclang1-3.5_1:3.5.2-1 libcloog-isl4_0.18.2-1 libcolord2_1.2.1-1+b3 libcomerr2_1.42.12-1.1 libcroco3_0.6.8-3 libcryptsetup4_2:1.6.6-5 libcups2_2.0.3-6 libdatrie1_0.2.9-2 libdb5.3_5.3.28-9 libdbus-1-3_1.8.16-1 libdconf1_0.24.0-2 libdebconfclient0_0.192 libdevmapper1.02.1_2:1.02.90-2.2 libdpkg-perl_1.17.25 libdrm2_2.4.58-2 libedit2_3.1-20150325-1 libegl1-mesa_10.5.9-2 libepoxy0_1.2-1 libexpat1_2.1.0-6 libfakeroot_1.20.2-1 libffi6_3.2.1-3 libflac8_1.3.1-2 libfontconfig1_2.11.0-6.3 libfontenc1_1:1.1.2-1 libfreetype6_2.5.2-4 libgbm1_10.5.9-2 libgc1c2_1:7.2d-6.4 libgcc-4.9-dev_4.9.3-2 libgcc1_1:5.1.1-14+rpi1 libgcrypt20_1.6.3-2 libgd3_2.1.1-1+b1 libgdbm3_1.8.3-13.1 libgdk-pixbuf2.0-0_2.31.4-2 libgdk-pixbuf2.0-common_2.31.4-2 libgif4_4.1.6-11 libgl1-mesa-glx_10.5.9-2 libglapi-mesa_10.5.9-2 libglib2.0-0_2.44.1-1.1 libgmp10_2:6.0.0+dfsg-6+rpi1 libgnutls-deb0-28_3.3.16-1 libgomp1_5.1.1-14+rpi1 libgpg-error0_1.17-3 libgraphite2-3_1.2.4-3 libgssapi-krb5-2_1.12.1+dfsg-20 libgtk-3-0_3.16.5-1 libgtk-3-bin_3.16.5-1 libgtk-3-common_3.16.5-1 libgtk2.0-0_2.24.28-1 libgtk2.0-common_2.24.28-1 libgvc6_2.38.0-10 libgvpr2_2.38.0-10 libharfbuzz0b_0.9.41-1 libhogweed4_3.1.1-3 libice6_2:1.0.9-1 libisl10_0.12.2-2 libisl13_0.14-2 libjasper1_1.900.1-debian1-2.4 libjbig0_2.1-3.1 libjpeg62-turbo_1:1.4.0-7 libjs-jquery_1.7.2+dfsg-3.2 libjson-c2_0.11-4 libjson-glib-1.0-0_1.0.4-1 libjson-glib-1.0-common_1.0.4-1 libk5crypto3_1.12.1+dfsg-20 libkeyutils1_1.5.9-5 libklibc_2.0.4-2+rpi1 libkmod2_18-3 libkrb5-3_1.12.1+dfsg-20 libkrb5support0_1.12.1+dfsg-20 liblcms2-2_2.6-3 libllvm3.5_1:3.5.2-1 liblocale-gettext-perl_1.05-8+b1 libltdl7_2.4.2-1.11 liblzma5_5.1.1alpha+20120614-2 libmagic1_1:5.22+15-2 libmount1_2.25.2-6 libmpc3_1.0.2-1 libmpdec2_2.4.1-1 libmpfr4_3.1.3-1 libncurses5_5.9+20140913-1 libncursesw5_5.9+20140913-1 libnettle6_3.1.1-3 libnih-dbus1_1.0.3-4.3 libnih1_1.0.3-4.3 libnspr4_2:4.10.8-2 libnss3_2:3.19.2-1 libobjc-4.9-dev_4.9.3-2 libobjc4_5.1.1-14+rpi1 libogg0_1.3.2-1 libp11-kit0_0.23.1-3 libpam-modules_1.1.8-3.1 libpam-modules-bin_1.1.8-3.1 libpam-runtime_1.1.8-3.1 libpam0g_1.1.8-3.1 libpango-1.0-0_1.36.8-3 libpangocairo-1.0-0_1.36.8-3 libpangoft2-1.0-0_1.36.8-3 libpathplan4_2.38.0-10 libpcre3_2:8.35-3.3 libpcsclite1_1.8.13-1 libpipeline1_1.4.0-1 libpixman-1-0_0.32.6-3 libpng12-0_1.2.50-2 libprocps3_2:3.3.9-9 libproxy1_0.4.11-4 libpulse0_6.0-2+b1 libpython3-stdlib_3.4.3-4 libpython3.4-minimal_3.4.3-7 libpython3.4-stdlib_3.4.3-7 libreadline6_6.3-8 librest-0.7-0_0.7.93-1 librsvg2-2_2.40.9-2 librsvg2-common_2.40.9-2 libselinux1_2.3-2 libsemanage-common_2.3-1 libsemanage1_2.3-1 libsepol1_2.3-2 libsigsegv2_2.10-4 libslang2_2.3.0-2 libsm6_2:1.2.2-1 libsmartcols1_2.25.2-6 libsndfile1_1.0.25-9.1 libsoup-gnome2.4-1_2.50.0-2 libsoup2.4-1_2.50.0-2 libsqlite3-0_3.8.10.2-1 libss2_1.42.12-1.1 libssl1.0.0_1.0.2d-1 libstdc++-4.9-dev_4.9.3-2 libstdc++6_5.1.1-14+rpi1 libsystemd0_215-17 libtasn1-6_4.5-2 libtext-charwidth-perl_0.04-7+b4 libtext-iconv-perl_1.7-5+b5 libtext-wrapi18n-perl_0.06-7 libthai-data_0.1.22-2 libthai0_0.1.22-2 libtiff5_4.0.3-13 libtimedate-perl_2.3000-2 libtinfo5_5.9+20140913-1 libtool_2.4.2-1.11 libubsan0_5.1.1-14+rpi1 libudev1_215-17 libunistring0_0.9.3-5.2 libusb-0.1-4_2:0.1.12-25 libustr-1.0-1_1.0.4-3 libuuid1_2.25.2-6 libvorbis0a_1.3.4-2 libvorbisenc2_1.3.4-2 libvpx2_1.4.0-4+rpi1 libwayland-client0_1.8.1-1 libwayland-cursor0_1.8.1-1 libwayland-egl1-mesa_10.5.9-2 libwayland-server0_1.8.1-1 libwrap0_7.6.q-25 libx11-6_2:1.6.3-1 libx11-data_2:1.6.3-1 libx11-xcb1_2:1.6.3-1 libxapian22_1.2.21-1 libxau6_1:1.0.8-1 libxaw7_2:1.0.12-2 libxcb-dri2-0_1.10-3 libxcb-dri3-0_1.10-3 libxcb-glx0_1.10-3 libxcb-present0_1.10-3 libxcb-render0_1.10-3 libxcb-shape0_1.10-3 libxcb-shm0_1.10-3 libxcb-sync1_1.10-3 libxcb-xfixes0_1.10-3 libxcb1_1.10-3 libxcomposite1_1:0.4.4-1 libxcursor1_1:1.1.14-1 libxdamage1_1:1.1.4-2 libxdmcp6_1:1.1.2-1 libxdot4_2.38.0-10 libxext6_2:1.3.3-1 libxfixes3_1:5.0.1-2 libxft2_2.3.2-1 libxi6_2:1.7.4-1 libxinerama1_2:1.1.3-1 libxkbcommon0_0.5.0-1 libxml2_2.9.1+dfsg1-5 libxmu6_2:1.1.2-1 libxmuu1_2:1.1.2-1 libxpm4_1:3.5.11-1 libxrandr2_2:1.4.2-1 libxrender1_1:0.9.8-1 libxshmfence1_1.2-1 libxt6_1:1.1.4-1 libxtst6_2:1.2.2-1 libxv1_2:1.0.10-1 libxxf86dga1_2:1.1.4-1 libxxf86vm1_1:1.1.4-1 linux-libc-dev_3.16.7-ckt4-1+rpi1 login_1:4.2-3 lsb-base_4.1+Debian13+rpi1+nmu1 m4_1.4.17-4 make_4.0-8.1 makedev_2.3.1-93 man-db_2.7.0.2-5 mawk_1.3.3-17 mime-support_3.58 mount_2.25.2-6 mountall_2.54 multiarch-support_2.19-18 ncurses-base_5.9+20140913-1 ncurses-bin_5.9+20140913-1 openjdk-7-jdk_7u79-2.5.5-1~deb8u1+rpi1 openjdk-7-jre_7u79-2.5.5-1~deb8u1+rpi1 openjdk-7-jre-headless_7u79-2.5.5-1~deb8u1+rpi1 openssl_1.0.2d-1 passwd_1:4.2-3 patch_2.7.5-1 perl_5.20.2-3 perl-base_5.20.2-3 perl-modules_5.20.2-3 plymouth_0.9.0-9 po-debconf_1.0.18 procps_2:3.3.9-9 python3_3.4.3-4 python3-minimal_3.4.3-4 python3.4_3.4.3-7 python3.4-minimal_3.4.3-7 raspbian-archive-keyring_20120528.2 readline-common_6.3-8 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-libhmsbeagle-dummy_0.invalid.0 sed_4.2.2-4 sensible-utils_0.0.9 shared-mime-info_1.3-1 startpar_0.59-3 systemd_215-17 systemd-sysv_215-17 sysv-rc_2.88dsf-59 sysvinit-utils_2.88dsf-59 tar_1.27.1-2 tzdata_2015e-1 tzdata-java_2015e-1 ucf_3.0030 udev_215-17 util-linux_2.25.2-6 x11-common_1:7.7+9 x11-utils_7.7+3 xkb-data_2.14-1 xz-utils_5.1.1alpha+20120614-2 zlib1g_1:1.2.8.dfsg-2

┌──────────────────────────────────────────────────────────────────────────────┐
│ Build                                                                        │
└──────────────────────────────────────────────────────────────────────────────┘


Unpack source
─────────────

gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
gpgv: Signature made Sat Jul 18 18:38:13 2015 UTC using RSA key ID D1C646D1
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./libhmsbeagle_2.1.2+20150609-1.dsc
dpkg-source: info: extracting libhmsbeagle in libhmsbeagle-2.1.2+20150609
dpkg-source: info: unpacking libhmsbeagle_2.1.2+20150609.orig.tar.xz
dpkg-source: info: unpacking libhmsbeagle_2.1.2+20150609-1.debian.tar.xz
dpkg-source: info: applying enable_static.patch
dpkg-source: info: applying gcc-4.7.patch
dpkg-source: info: applying doxygen_update.patch

Check disc space
────────────────

Sufficient free space for build

User Environment
────────────────

DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=stretch-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=stretch-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=stretch-staging-armhf-sbuild-95d2ac78-211b-4576-9c5a-943d20a6e40e
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd

dpkg-buildpackage
─────────────────

dpkg-buildpackage: source package libhmsbeagle
dpkg-buildpackage: source version 2.1.2+20150609-1
dpkg-buildpackage: source distribution unstable
 dpkg-source --before-build libhmsbeagle-2.1.2+20150609
dpkg-buildpackage: host architecture armhf
 fakeroot debian/rules clean
dh clean --with autoreconf --with javahelper
   dh_testdir
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609'
/usr/bin/make -f Makefile distclean || true
make[2]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609'
make[2]: Makefile: No such file or directory
make[2]: *** No rule to make target 'Makefile'.  Stop.
make[2]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609'
rm -rf doc .config configure
rm -rf lib build
make[1]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609'
   dh_autoreconf_clean
   jh_clean
   dh_clean
 debian/rules build-arch
dh build-arch --with autoreconf --with javahelper
   dh_testdir -a
   dh_autoreconf -a
libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, `.config'.
libtoolize: copying file `.config/ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIR, `m4'.
libtoolize: copying file `m4/libtool.m4'
libtoolize: copying file `m4/ltoptions.m4'
libtoolize: copying file `m4/ltsugar.m4'
libtoolize: copying file `m4/ltversion.m4'
libtoolize: copying file `m4/lt~obsolete.m4'
configure.ac:60: installing '.config/compile'
configure.ac:66: installing '.config/config.guess'
configure.ac:66: installing '.config/config.sub'
configure.ac:58: installing '.config/install-sh'
configure.ac:58: installing '.config/missing'
Makefile.am: installing './INSTALL'
examples/complextest/Makefile.am: installing '.config/depcomp'
parallel-tests: installing '.config/test-driver'
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609'
./autogen.sh
libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, `.config'.
libtoolize: copying file `.config/ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIR, `m4'.
libtoolize: copying file `m4/libtool.m4'
libtoolize: copying file `m4/ltoptions.m4'
libtoolize: copying file `m4/ltsugar.m4'
libtoolize: copying file `m4/ltversion.m4'
libtoolize: copying file `m4/lt~obsolete.m4'
dh_auto_configure -- --enable-doxygen-man --enable-march-native=no --enable-sse=no
	./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --libexecdir=\${prefix}/lib/arm-linux-gnueabihf --disable-maintainer-mode --disable-dependency-tracking --enable-doxygen-man --enable-march-native=no --enable-sse=no
configure: WARNING: unrecognized options: --disable-maintainer-mode
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking for style of include used by make... GNU
checking dependency style of gcc... none
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking dependency style of g++... none
checking whether ln -s works... yes
checking build system type... arm-unknown-linux-gnueabihf
checking host system type... arm-unknown-linux-gnueabihf
checking how to print strings... printf
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking the maximum length of command line arguments... 1572864
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop
checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for mt... mt
checking if mt is a manifest tool... no
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking how to run the C++ preprocessor... g++ -E
checking for ld used by g++... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking for g++ option to produce PIC... -fPIC -DPIC
checking if g++ PIC flag -fPIC -DPIC works... yes
checking if g++ static flag -static works... yes
checking if g++ supports -c -o file.o... yes
checking if g++ supports -c -o file.o... (cached) yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for library containing lt_dlinit... no
checking for library containing dlopen... -ldl
checking if gcc accepts -dumpversion option... yes
checking gcc version... 4.9.3
checking for /usr/include/CL... no
checking for /usr/local/cuda/... no
checking for /usr/local/cuda/include... no
checking for /usr/local/cuda/lib... no
checking for javac... javac
checking for javac... /usr/bin/javac
checking symlink for /usr/bin/javac... /etc/alternatives/javac
checking symlink for /etc/alternatives/javac... /usr/lib/jvm/java-7-openjdk-armhf/bin/javac
checking for doxygen... /usr/bin/doxygen
checking for perl... /usr/bin/perl
checking for dot... /usr/bin/dot
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating hmsbeagle-1.pc
config.status: creating libhmsbeagle/Makefile
config.status: creating libhmsbeagle/GPU/Makefile
config.status: creating libhmsbeagle/GPU/kernels/Makefile
config.status: creating libhmsbeagle/CPU/Makefile
config.status: creating libhmsbeagle/plugin/Makefile
config.status: creating libhmsbeagle/JNI/Makefile
config.status: creating examples/Makefile
config.status: creating examples/tinytest/Makefile
config.status: creating examples/complextest/Makefile
config.status: creating examples/oddstatetest/Makefile
config.status: creating examples/fourtaxon/Makefile
config.status: creating examples/genomictest/Makefile
config.status: creating examples/matrixtest/Makefile
config.status: creating libhmsbeagle/config.h
config.status: executing depfiles commands
config.status: executing libtool commands
configure: WARNING: unrecognized options: --disable-maintainer-mode
configure: WARNING: OpenCL not found or disabled.  OpenCL implementation  will not be built. If OpenCL support is desired, check the path to OpenCL and specify --with-opencl=/path/to/opencl
configure: WARNING: NVIDIA CUDA nvcc compiler not found or CUDA support disabled.  CUDA implementation will not be built. If CUDA support is desired, check the path to CUDA and specify --with-cuda=/path/to/cuda
make[1]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609'
   jh_linkjars -a
   debian/rules override_dh_auto_build
make[1]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609'
/usr/bin/make
make[2]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609'
Making all in libhmsbeagle
make[3]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle'
/usr/bin/make  all-recursive
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle'
Making all in GPU
make[5]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/GPU'
Making all in kernels
make[6]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/GPU/kernels'
/usr/bin/make  all-am
make[7]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/GPU/kernels'
make[7]: Nothing to be done for 'all-am'.
make[7]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/GPU/kernels'
make[6]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/GPU/kernels'
make[6]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/GPU'
make[6]: Nothing to be done for 'all-am'.
make[6]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/GPU'
make[5]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/GPU'
Making all in CPU
make[5]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/CPU'
/bin/bash ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle  -I/«BUILDDIR»/libhmsbeagle-2.1.2+20150609 -I/«BUILDDIR»/libhmsbeagle-2.1.2+20150609 -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-7-openjdk-armhf/include -I/usr/lib/jvm/java-7-openjdk-armhf/include/linux  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_cpu_la-BeagleCPUPlugin.lo `test -f 'BeagleCPUPlugin.cpp' || echo './'`BeagleCPUPlugin.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/«BUILDDIR»/libhmsbeagle-2.1.2+20150609 -I/«BUILDDIR»/libhmsbeagle-2.1.2+20150609 -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-7-openjdk-armhf/include -I/usr/lib/jvm/java-7-openjdk-armhf/include/linux -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c BeagleCPUPlugin.cpp  -fPIC -DPIC -o .libs/libhmsbeagle_cpu_la-BeagleCPUPlugin.o
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I/«BUILDDIR»/libhmsbeagle-2.1.2+20150609 -I/«BUILDDIR»/libhmsbeagle-2.1.2+20150609 -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-7-openjdk-armhf/include -I/usr/lib/jvm/java-7-openjdk-armhf/include/linux -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c BeagleCPUPlugin.cpp -o libhmsbeagle_cpu_la-BeagleCPUPlugin.o >/dev/null 2>&1
/bin/bash ../../libtool  --tag=CXX   --mode=link g++  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -module -version-number 21 -Wl,-z,relro -o libhmsbeagle-cpu.la -rpath /usr/lib/arm-linux-gnueabihf  libhmsbeagle_cpu_la-BeagleCPUPlugin.lo  -ldl 
libtool: link: g++  -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/4.9/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/4.9/crtbeginS.o  .libs/libhmsbeagle_cpu_la-BeagleCPUPlugin.o   -ldl -L/usr/lib/gcc/arm-linux-gnueabihf/4.9 -L/usr/lib/gcc/arm-linux-gnueabihf/4.9/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/4.9/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/4.9/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/4.9/../../../arm-linux-gnueabihf/crtn.o  -O2 -Wl,-z -Wl,relro   -Wl,-soname -Wl,libhmsbeagle-cpu.so.21 -o .libs/libhmsbeagle-cpu.so.21.0.0
libtool: link: (cd ".libs" && rm -f "libhmsbeagle-cpu.so.21" && ln -s "libhmsbeagle-cpu.so.21.0.0" "libhmsbeagle-cpu.so.21")
libtool: link: (cd ".libs" && rm -f "libhmsbeagle-cpu.so" && ln -s "libhmsbeagle-cpu.so.21.0.0" "libhmsbeagle-cpu.so")
libtool: link: ar cru .libs/libhmsbeagle-cpu.a  libhmsbeagle_cpu_la-BeagleCPUPlugin.o
libtool: link: ranlib .libs/libhmsbeagle-cpu.a
libtool: link: ( cd ".libs" && rm -f "libhmsbeagle-cpu.la" && ln -s "../libhmsbeagle-cpu.la" "libhmsbeagle-cpu.la" )
make[5]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/CPU'
Making all in plugin
make[5]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/plugin'
/bin/bash ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle  -I../.. -I../.. -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-7-openjdk-armhf/include -I/usr/lib/jvm/java-7-openjdk-armhf/include/linux  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o libplugin_la-Plugin.lo `test -f 'Plugin.cpp' || echo './'`Plugin.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-7-openjdk-armhf/include -I/usr/lib/jvm/java-7-openjdk-armhf/include/linux -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c Plugin.cpp  -fPIC -DPIC -o .libs/libplugin_la-Plugin.o
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-7-openjdk-armhf/include -I/usr/lib/jvm/java-7-openjdk-armhf/include/linux -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c Plugin.cpp -o libplugin_la-Plugin.o >/dev/null 2>&1
/bin/bash ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle  -I../.. -I../.. -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-7-openjdk-armhf/include -I/usr/lib/jvm/java-7-openjdk-armhf/include/linux  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o libplugin_la-UnixSharedLibrary.lo `test -f 'UnixSharedLibrary.cpp' || echo './'`UnixSharedLibrary.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-7-openjdk-armhf/include -I/usr/lib/jvm/java-7-openjdk-armhf/include/linux -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c UnixSharedLibrary.cpp  -fPIC -DPIC -o .libs/libplugin_la-UnixSharedLibrary.o
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-7-openjdk-armhf/include -I/usr/lib/jvm/java-7-openjdk-armhf/include/linux -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c UnixSharedLibrary.cpp -o libplugin_la-UnixSharedLibrary.o >/dev/null 2>&1
/bin/bash ../../libtool  --tag=CXX   --mode=link g++  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security  -Wl,-z,relro -o libplugin.la  libplugin_la-Plugin.lo libplugin_la-UnixSharedLibrary.lo  -ldl 
libtool: link: ar cru .libs/libplugin.a .libs/libplugin_la-Plugin.o .libs/libplugin_la-UnixSharedLibrary.o 
libtool: link: ranlib .libs/libplugin.a
libtool: link: ( cd ".libs" && rm -f "libplugin.la" && ln -s "../libplugin.la" "libplugin.la" )
make[5]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/plugin'
make[5]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle'
/bin/bash ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I.. -I.. -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-7-openjdk-armhf/include -I/usr/lib/jvm/java-7-openjdk-armhf/include/linux  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_la-beagle.lo `test -f 'beagle.cpp' || echo './'`beagle.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I.. -I.. -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-7-openjdk-armhf/include -I/usr/lib/jvm/java-7-openjdk-armhf/include/linux -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c beagle.cpp  -fPIC -DPIC -o .libs/libhmsbeagle_la-beagle.o
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I.. -I.. -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-7-openjdk-armhf/include -I/usr/lib/jvm/java-7-openjdk-armhf/include/linux -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c beagle.cpp -o libhmsbeagle_la-beagle.o >/dev/null 2>&1
/bin/bash ../libtool  --tag=CXX   --mode=link g++  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -version-info 2:1:1 -Wl,-z,relro -o libhmsbeagle.la -rpath /usr/lib/arm-linux-gnueabihf libhmsbeagle_la-beagle.lo plugin/libplugin.la -ldl 
libtool: link: g++  -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/4.9/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/4.9/crtbeginS.o  .libs/libhmsbeagle_la-beagle.o  -Wl,--whole-archive plugin/.libs/libplugin.a -Wl,--no-whole-archive  -ldl -L/usr/lib/gcc/arm-linux-gnueabihf/4.9 -L/usr/lib/gcc/arm-linux-gnueabihf/4.9/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/4.9/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/4.9/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/4.9/../../../arm-linux-gnueabihf/crtn.o  -O2 -Wl,-z -Wl,relro   -Wl,-soname -Wl,libhmsbeagle.so.1 -o .libs/libhmsbeagle.so.1.1.1
libtool: link: (cd ".libs" && rm -f "libhmsbeagle.so.1" && ln -s "libhmsbeagle.so.1.1.1" "libhmsbeagle.so.1")
libtool: link: (cd ".libs" && rm -f "libhmsbeagle.so" && ln -s "libhmsbeagle.so.1.1.1" "libhmsbeagle.so")
libtool: link: (cd .libs/libhmsbeagle.lax/libplugin.a && ar x "/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/plugin/.libs/libplugin.a")
libtool: link: ar cru .libs/libhmsbeagle.a  libhmsbeagle_la-beagle.o  .libs/libhmsbeagle.lax/libplugin.a/libplugin_la-Plugin.o .libs/libhmsbeagle.lax/libplugin.a/libplugin_la-UnixSharedLibrary.o 
libtool: link: ranlib .libs/libhmsbeagle.a
libtool: link: rm -fr .libs/libhmsbeagle.lax
libtool: link: ( cd ".libs" && rm -f "libhmsbeagle.la" && ln -s "../libhmsbeagle.la" "libhmsbeagle.la" )
make[5]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle'
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle'
make[3]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle'
Making all in libhmsbeagle/JNI
make[3]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/JNI'
/bin/bash ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle  -I../.. -I../.. -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-7-openjdk-armhf/include -I/usr/lib/jvm/java-7-openjdk-armhf/include/linux  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.lo `test -f 'beagle_BeagleJNIWrapper.cpp' || echo './'`beagle_BeagleJNIWrapper.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-7-openjdk-armhf/include -I/usr/lib/jvm/java-7-openjdk-armhf/include/linux -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c beagle_BeagleJNIWrapper.cpp  -fPIC -DPIC -o .libs/libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.o
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle -I../.. -I../.. -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-7-openjdk-armhf/include -I/usr/lib/jvm/java-7-openjdk-armhf/include/linux -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c beagle_BeagleJNIWrapper.cpp -o libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.o >/dev/null 2>&1
/bin/bash ../../libtool  --tag=CXX   --mode=link g++  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -module -avoid-version  -Wl,-z,relro -o libhmsbeagle-jni.la -rpath /usr/lib/arm-linux-gnueabihf libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.lo -L../../libhmsbeagle -lhmsbeagle -ldl 
libtool: link: g++  -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/4.9/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/4.9/crtbeginS.o  .libs/libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.o   -Wl,-rpath -Wl,/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/.libs -L../../libhmsbeagle /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/.libs/libhmsbeagle.so -ldl -L/usr/lib/gcc/arm-linux-gnueabihf/4.9 -L/usr/lib/gcc/arm-linux-gnueabihf/4.9/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/4.9/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/4.9/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/4.9/../../../arm-linux-gnueabihf/crtn.o  -O2 -Wl,-z -Wl,relro   -Wl,-soname -Wl,libhmsbeagle-jni.so -o .libs/libhmsbeagle-jni.so
libtool: link: ar cru .libs/libhmsbeagle-jni.a  libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.o
libtool: link: ranlib .libs/libhmsbeagle-jni.a
libtool: link: ( cd ".libs" && rm -f "libhmsbeagle-jni.la" && ln -s "../libhmsbeagle-jni.la" "libhmsbeagle-jni.la" )
make[3]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/JNI'
Making all in examples
make[3]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples'
Making all in genomictest
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/genomictest'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/genomictest'
Making all in tinytest
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/tinytest'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/tinytest'
Making all in oddstatetest
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/oddstatetest'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/oddstatetest'
Making all in complextest
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/complextest'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/complextest'
Making all in fourtaxon
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/fourtaxon'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/fourtaxon'
Making all in matrixtest
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/matrixtest'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/matrixtest'
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples'
make[4]: Nothing to be done for 'all-am'.
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples'
make[3]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples'
make[3]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609'
make[3]: Nothing to be done for 'all-am'.
make[3]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609'
make[2]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609'
/usr/bin/make doxygen-doc
make[2]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609'
rm -rf doc
SRCDIR='.' PROJECT='libhmsbeagle' DOCDIR='doc' VERSION='2.1.2' PERL_PATH='/usr/bin/perl' HAVE_DOT='YES' DOT_PATH='/usr/bin' GENERATE_MAN='YES' GENERATE_RTF='NO' GENERATE_XML='NO' GENERATE_HTMLHELP='NO' GENERATE_CHI='NO' GENERATE_HTML='YES' GENERATE_LATEX='NO' /usr/bin/doxygen ./beagle.dox
Warning: Tag `XML_SCHEMA' at line 1786 of file `./beagle.dox' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
Warning: Tag `XML_DTD' at line 1792 of file `./beagle.dox' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
Notice: Output directory `doc' does not exist. I have created it for you.
Searching for include files...
Searching for example files...
Searching for images...
Searching for dot files...
Searching for msc files...
Searching for dia files...
Searching for files to exclude
Searching for files to process...
Searching for files in directory /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle
Reading and parsing tag files
Parsing files
Preprocessing /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/beagle.h...
Parsing file /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/beagle.h...
Building group list...
Building directory list...
Building namespace list...
Building file list...
Building class list...
Associating documentation with classes...
Computing nesting relations for classes...
Building example list...
Searching for enumerations...
Searching for documented typedefs...
Searching for members imported via using declarations...
Searching for included using directives...
Searching for documented variables...
Building interface member list...
Building member list...
Searching for friends...
Searching for documented defines...
Computing class inheritance relations...
Computing class usage relations...
Flushing cached template relations that have become invalid...
Creating members for template instances...
Computing class relations...
Add enum values to enums...
Searching for member function documentation...
Building page list...
Search for main page...
Computing page relations...
Determining the scope of groups...
Sorting lists...
Freeing entry tree
Determining which enums are documented
Computing member relations...
Building full member lists recursively...
Adding members to member groups.
Computing member references...
Inheriting documentation...
Generating disk names...
Adding source references...
Adding xrefitems...
Sorting member lists...
Computing dependencies between directories...
Generating citations page...
Counting data structures...
Resolving user defined references...
Finding anchors and sections in the documentation...
Transferring function references...
Combining using relations...
Adding members to index pages...
Generating style sheet...
Generating search indices...
Generating example documentation...
Generating file sources...
Generating code for file libhmsbeagle/beagle.h...
Generating file documentation...
Generating docs for file libhmsbeagle/beagle.h...
Generating page documentation...
Generating group documentation...
Generating class documentation...
Generating docs for compound BeagleInstanceDetails...
Generating docs for compound BeagleOperation...
Generating docs for compound BeagleResource...
Generating docs for compound BeagleResourceList...
Generating namespace index...
Generating graph info page...
Generating directory documentation...
Generating dependency graph for directory libhmsbeagle
Generating index page...
Generating page index...
Generating module index...
Generating namespace index...
Generating namespace member index...
Generating annotated compound index...
Generating alphabetical compound index...
Generating hierarchical class index...
Generating graphical class hierarchy...
Generating member index...
Generating file index...
Generating file member index...
Generating example index...
finalizing index lists...
writing tag file...
Generating SQLITE3 output...
Initializing DB schema...
Generating Sqlite3 output for class BeagleInstanceDetails
Generating Sqlite3 output for class BeagleInstanceDetails
Generating Sqlite3 output for class BeagleOperation
Generating Sqlite3 output for class BeagleOperation
Generating Sqlite3 output for class BeagleResource
Generating Sqlite3 output for class BeagleResource
Generating Sqlite3 output for class BeagleResourceList
Generating Sqlite3 output for class BeagleResourceList
Generating Sqlite3 output for file beagle.h
Generating Sqlite3 output for dir /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/
Running dot...
Generating dot graphs using 5 parallel threads...
Running dot for graph 1/4
Running dot for graph 2/4
Running dot for graph 3/4
Running dot for graph 4/4
Patching output file 1/3
Patching output file 2/3
Patching output file 3/3
lookup cache used 97/65536 hits=142 misses=98
finished...
make[2]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609'
ant
Buildfile: /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/build.xml

init:
    [mkdir] Created dir: /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/build
    [mkdir] Created dir: /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/lib

compile:
    [javac] /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/build.xml:37: warning: 'includeantruntime' was not set, defaulting to build.sysclasspath=last; set to false for repeatable builds
    [javac] Compiling 13 source files to /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/build
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 1.6
    [javac] 1 warning

dist:
      [jar] Building jar: /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/lib/beagle.jar

BUILD SUCCESSFUL
Total time: 10 seconds
make[1]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609'
   jh_build -a
   dh_auto_test -a
	make -j1 check
make[1]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609'
Making check in libhmsbeagle
make[2]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle'
Making check in GPU
make[3]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/GPU'
Making check in kernels
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/GPU/kernels'
make  check-am
make[5]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/GPU/kernels'
make[5]: Nothing to be done for 'check-am'.
make[5]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/GPU/kernels'
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/GPU/kernels'
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/GPU'
make[4]: Nothing to be done for 'check-am'.
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/GPU'
make[3]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/GPU'
Making check in CPU
make[3]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/CPU'
make[3]: Nothing to be done for 'check'.
make[3]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/CPU'
Making check in plugin
make[3]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/plugin'
make[3]: Nothing to be done for 'check'.
make[3]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/plugin'
make[3]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle'
make[3]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle'
make[2]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle'
Making check in libhmsbeagle/JNI
make[2]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/JNI'
make[2]: Nothing to be done for 'check'.
make[2]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/JNI'
Making check in examples
make[2]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples'
Making check in genomictest
make[3]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/genomictest'
make  genomictest genomictest.sh
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/genomictest'
g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle  -I../.. -I../.. -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-7-openjdk-armhf/include -I/usr/lib/jvm/java-7-openjdk-armhf/include/linux  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o genomictest.o genomictest.cpp
g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle  -I../.. -I../.. -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-7-openjdk-armhf/include -I/usr/lib/jvm/java-7-openjdk-armhf/include/linux  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o linalg.o linalg.cpp
/bin/bash ../../libtool  --tag=CXX   --mode=link g++  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security  -Wl,-z,relro -o genomictest genomictest.o linalg.o ../../libhmsbeagle/libhmsbeagle.la -ldl 
libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/genomictest genomictest.o linalg.o  ../../libhmsbeagle/.libs/libhmsbeagle.so -ldl
echo './genomictest' > genomictest.sh
echo './genomictest --states 64 --sites 100 --taxa 10' >> genomictest.sh
chmod +x genomictest.sh
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/genomictest'
make  check-TESTS
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/genomictest'
make[5]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/genomictest'
PASS: genomictest.sh
============================================================================
Testsuite summary for libhmsbeagle 2.1.2
============================================================================
# TOTAL: 1
# PASS:  1
# SKIP:  0
# XFAIL: 0
# FAIL:  0
# XPASS: 0
# ERROR: 0
============================================================================
make[5]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/genomictest'
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/genomictest'
make[3]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/genomictest'
Making check in tinytest
make[3]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/tinytest'
make  tinytest
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/tinytest'
g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle  -I../.. -I../.. -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-7-openjdk-armhf/include -I/usr/lib/jvm/java-7-openjdk-armhf/include/linux  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o tinytest.o tinytest.cpp
/bin/bash ../../libtool  --tag=CXX   --mode=link g++  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security  -Wl,-z,relro -o tinytest tinytest.o ../../libhmsbeagle/libhmsbeagle.la -ldl 
libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/tinytest tinytest.o  ../../libhmsbeagle/.libs/libhmsbeagle.so -ldl
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/tinytest'
make  check-TESTS
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/tinytest'
make[5]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/tinytest'
PASS: tinytest
============================================================================
Testsuite summary for libhmsbeagle 2.1.2
============================================================================
# TOTAL: 1
# PASS:  1
# SKIP:  0
# XFAIL: 0
# FAIL:  0
# XPASS: 0
# ERROR: 0
============================================================================
make[5]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/tinytest'
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/tinytest'
make[3]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/tinytest'
Making check in oddstatetest
make[3]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/oddstatetest'
make  oddstatetest
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/oddstatetest'
g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle  -I../.. -I../.. -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-7-openjdk-armhf/include -I/usr/lib/jvm/java-7-openjdk-armhf/include/linux  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o oddstatetest.o oddstatetest.cpp
oddstatetest.cpp: In function 'int main(int, const char**)':
oddstatetest.cpp:444:36: warning: passing NULL to non-pointer argument 1 of 'void runBeagle(int, int, int, int, bool, bool, int)' [-Wconversion-null]
                   rateCategoryCount);
                                    ^
/bin/bash ../../libtool  --tag=CXX   --mode=link g++  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security  -Wl,-z,relro -o oddstatetest oddstatetest.o ../../libhmsbeagle/libhmsbeagle.la -ldl 
libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/oddstatetest oddstatetest.o  ../../libhmsbeagle/.libs/libhmsbeagle.so -ldl
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/oddstatetest'
make  check-TESTS
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/oddstatetest'
make[5]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/oddstatetest'
PASS: oddstatetest
============================================================================
Testsuite summary for libhmsbeagle 2.1.2
============================================================================
# TOTAL: 1
# PASS:  1
# SKIP:  0
# XFAIL: 0
# FAIL:  0
# XPASS: 0
# ERROR: 0
============================================================================
make[5]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/oddstatetest'
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/oddstatetest'
make[3]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/oddstatetest'
Making check in complextest
make[3]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/complextest'
make  complextest
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/complextest'
g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle  -I../.. -I../.. -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-7-openjdk-armhf/include -I/usr/lib/jvm/java-7-openjdk-armhf/include/linux  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o complextest.o complextest.cpp
/bin/bash ../../libtool  --tag=CXX   --mode=link g++  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security  -Wl,-z,relro -o complextest complextest.o ../../libhmsbeagle/libhmsbeagle.la -ldl 
libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/complextest complextest.o  ../../libhmsbeagle/.libs/libhmsbeagle.so -ldl
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/complextest'
make  check-TESTS
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/complextest'
make[5]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/complextest'
PASS: complextest
============================================================================
Testsuite summary for libhmsbeagle 2.1.2
============================================================================
# TOTAL: 1
# PASS:  1
# SKIP:  0
# XFAIL: 0
# FAIL:  0
# XPASS: 0
# ERROR: 0
============================================================================
make[5]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/complextest'
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/complextest'
make[3]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/complextest'
Making check in fourtaxon
make[3]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/fourtaxon'
make  fourtaxon fourtaxonrun.sh
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/fourtaxon'
g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle  -I../.. -I../.. -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-7-openjdk-armhf/include -I/usr/lib/jvm/java-7-openjdk-armhf/include/linux  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o fourtaxon.o fourtaxon.cpp
/bin/bash ../../libtool  --tag=CXX   --mode=link g++  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security  -Wl,-z,relro -o fourtaxon fourtaxon.o ../../libhmsbeagle/libhmsbeagle.la -ldl 
libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/fourtaxon fourtaxon.o  ../../libhmsbeagle/.libs/libhmsbeagle.so -ldl
echo './fourtaxon --niters 4 --filename ./fourtaxon.dat' > fourtaxonrun.sh
chmod +x fourtaxonrun.sh
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/fourtaxon'
make  check-TESTS
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/fourtaxon'
make[5]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/fourtaxon'
PASS: fourtaxonrun.sh
============================================================================
Testsuite summary for libhmsbeagle 2.1.2
============================================================================
# TOTAL: 1
# PASS:  1
# SKIP:  0
# XFAIL: 0
# FAIL:  0
# XPASS: 0
# ERROR: 0
============================================================================
make[5]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/fourtaxon'
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/fourtaxon'
make[3]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/fourtaxon'
Making check in matrixtest
make[3]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/matrixtest'
make  matrixtest
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/matrixtest'
g++ -DHAVE_CONFIG_H -I. -I../../libhmsbeagle  -I../.. -I../.. -D_FORTIFY_SOURCE=2 -I/usr/lib/jvm/java-7-openjdk-armhf/include -I/usr/lib/jvm/java-7-openjdk-armhf/include/linux  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o matrixtest.o matrixtest.cpp
/bin/bash ../../libtool  --tag=CXX   --mode=link g++  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security  -Wl,-z,relro -o matrixtest matrixtest.o ../../libhmsbeagle/libhmsbeagle.la -ldl 
libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/matrixtest matrixtest.o  ../../libhmsbeagle/.libs/libhmsbeagle.so -ldl
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/matrixtest'
make  check-TESTS
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/matrixtest'
make[5]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/matrixtest'
PASS: matrixtest
============================================================================
Testsuite summary for libhmsbeagle 2.1.2
============================================================================
# TOTAL: 1
# PASS:  1
# SKIP:  0
# XFAIL: 0
# FAIL:  0
# XPASS: 0
# ERROR: 0
============================================================================
make[5]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/matrixtest'
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/matrixtest'
make[3]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/matrixtest'
make[3]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples'
make[3]: Nothing to be done for 'check-am'.
make[3]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples'
make[2]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples'
make[2]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609'
make[2]: Nothing to be done for 'check-am'.
make[2]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609'
make[1]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609'
 fakeroot debian/rules binary-arch
dh binary-arch --with autoreconf --with javahelper
   dh_testroot -a
   dh_prep -a
   dh_installdirs -a
   dh_auto_install -a
	make -j1 install DESTDIR=/«BUILDDIR»/libhmsbeagle-2.1.2\+20150609/debian/tmp AM_UPDATE_INFO_DIR=no
make[1]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609'
Making install in libhmsbeagle
make[2]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle'
Making install in GPU
make[3]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/GPU'
Making install in kernels
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/GPU/kernels'
make  install-am
make[5]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/GPU/kernels'
make[6]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/GPU/kernels'
make[6]: Nothing to be done for 'install-exec-am'.
make[6]: Nothing to be done for 'install-data-am'.
make[6]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/GPU/kernels'
make[5]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/GPU/kernels'
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/GPU/kernels'
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/GPU'
make[5]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/GPU'
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/GPU'
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/GPU'
make[3]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/GPU'
Making install in CPU
make[3]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/CPU'
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/CPU'
 /bin/mkdir -p '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp/usr/lib/arm-linux-gnueabihf'
 /bin/bash ../../libtool   --mode=install /usr/bin/install -c   libhmsbeagle-cpu.la '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/libhmsbeagle-cpu.so.21.0.0 /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so.21.0.0
libtool: install: (cd /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libhmsbeagle-cpu.so.21.0.0 libhmsbeagle-cpu.so.21 || { rm -f libhmsbeagle-cpu.so.21 && ln -s libhmsbeagle-cpu.so.21.0.0 libhmsbeagle-cpu.so.21; }; })
libtool: install: (cd /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libhmsbeagle-cpu.so.21.0.0 libhmsbeagle-cpu.so || { rm -f libhmsbeagle-cpu.so && ln -s libhmsbeagle-cpu.so.21.0.0 libhmsbeagle-cpu.so; }; })
libtool: install: /usr/bin/install -c .libs/libhmsbeagle-cpu.lai /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.la
libtool: install: /usr/bin/install -c .libs/libhmsbeagle-cpu.a /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.a
libtool: install: chmod 644 /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.a
libtool: install: ranlib /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.a
libtool: install: warning: remember to run `libtool --finish /usr/lib/arm-linux-gnueabihf'
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/CPU'
make[3]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/CPU'
Making install in plugin
make[3]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/plugin'
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/plugin'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/plugin'
make[3]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/plugin'
make[3]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle'
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle'
 /bin/mkdir -p '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp/usr/lib/arm-linux-gnueabihf'
 /bin/bash ../libtool   --mode=install /usr/bin/install -c   libhmsbeagle.la '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/libhmsbeagle.so.1.1.1 /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so.1.1.1
libtool: install: (cd /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libhmsbeagle.so.1.1.1 libhmsbeagle.so.1 || { rm -f libhmsbeagle.so.1 && ln -s libhmsbeagle.so.1.1.1 libhmsbeagle.so.1; }; })
libtool: install: (cd /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libhmsbeagle.so.1.1.1 libhmsbeagle.so || { rm -f libhmsbeagle.so && ln -s libhmsbeagle.so.1.1.1 libhmsbeagle.so; }; })
libtool: install: /usr/bin/install -c .libs/libhmsbeagle.lai /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle.la
libtool: install: /usr/bin/install -c .libs/libhmsbeagle.a /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle.a
libtool: install: chmod 644 /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle.a
libtool: install: ranlib /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle.a
libtool: install: warning: remember to run `libtool --finish /usr/lib/arm-linux-gnueabihf'
 /bin/mkdir -p '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp/usr/include/libhmsbeagle-1/libhmsbeagle'
 /usr/bin/install -c -m 644 beagle.h platform.h '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp/usr/include/libhmsbeagle-1/libhmsbeagle'
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle'
make[3]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle'
make[2]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle'
Making install in libhmsbeagle/JNI
make[2]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/JNI'
make[3]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/JNI'
 /bin/mkdir -p '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp/usr/lib/arm-linux-gnueabihf'
 /bin/bash ../../libtool   --mode=install /usr/bin/install -c   libhmsbeagle-jni.la '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp/usr/lib/arm-linux-gnueabihf'
libtool: install: warning: relinking `libhmsbeagle-jni.la'
libtool: install: (cd /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/JNI; /bin/bash /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libtool  --tag CXX --mode=relink g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -module -avoid-version -Wl,-z,relro -o libhmsbeagle-jni.la -rpath /usr/lib/arm-linux-gnueabihf libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.lo -L../../libhmsbeagle -lhmsbeagle -ldl -inst-prefix-dir /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp)
libtool: relink: g++  -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/4.9/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/4.9/crtbeginS.o  .libs/libhmsbeagle_jni_la-beagle_BeagleJNIWrapper.o   -L../../libhmsbeagle -L/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lhmsbeagle -ldl -L/usr/lib/gcc/arm-linux-gnueabihf/4.9 -L/usr/lib/gcc/arm-linux-gnueabihf/4.9/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/4.9/../../.. -L/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/4.9/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/4.9/../../../arm-linux-gnueabihf/crtn.o  -O2 -Wl,-z -Wl,relro   -Wl,-soname -Wl,libhmsbeagle-jni.so -o .libs/libhmsbeagle-jni.so
libtool: install: /usr/bin/install -c .libs/libhmsbeagle-jni.soT /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-jni.so
libtool: install: /usr/bin/install -c .libs/libhmsbeagle-jni.lai /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-jni.la
libtool: install: /usr/bin/install -c .libs/libhmsbeagle-jni.a /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-jni.a
libtool: install: chmod 644 /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-jni.a
libtool: install: ranlib /«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp/usr/lib/arm-linux-gnueabihf/libhmsbeagle-jni.a
libtool: install: warning: remember to run `libtool --finish /usr/lib/arm-linux-gnueabihf'
make[3]: Nothing to be done for 'install-data-am'.
make[3]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/JNI'
make[2]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/libhmsbeagle/JNI'
Making install in examples
make[2]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples'
Making install in genomictest
make[3]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/genomictest'
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/genomictest'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/genomictest'
make[3]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/genomictest'
Making install in tinytest
make[3]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/tinytest'
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/tinytest'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/tinytest'
make[3]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/tinytest'
Making install in oddstatetest
make[3]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/oddstatetest'
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/oddstatetest'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/oddstatetest'
make[3]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/oddstatetest'
Making install in complextest
make[3]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/complextest'
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/complextest'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/complextest'
make[3]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/complextest'
Making install in fourtaxon
make[3]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/fourtaxon'
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/fourtaxon'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/fourtaxon'
make[3]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/fourtaxon'
Making install in matrixtest
make[3]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/matrixtest'
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/matrixtest'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/matrixtest'
make[3]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples/matrixtest'
make[3]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples'
make[4]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples'
make[3]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples'
make[2]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/examples'
make[2]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609'
make[3]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609'
make[3]: Nothing to be done for 'install-exec-am'.
 /bin/mkdir -p '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig'
 /usr/bin/install -c -m 644 hmsbeagle-1.pc '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig'
make[3]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609'
make[2]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609'
make[1]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609'
   debian/rules override_dh_install
make[1]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609'
dh_install
jniso=`find debian/libhmsbeagle1 -name libhmsbeagle-jni.so` ; \
mkdir -p `dirname $jniso`/jni ; \
mv $jniso `dirname $jniso`/jni
make[1]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609'
   jh_installjavadoc -a
   debian/rules override_dh_installdocs
make[1]: Entering directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609'
dh_installdocs
find debian/libhmsbeagle-dev -name jquery.js -delete
find debian/libhmsbeagle-dev -name "*.md5" -delete
make[1]: Leaving directory '/«BUILDDIR»/libhmsbeagle-2.1.2+20150609'
   dh_installchangelogs -a
   dh_installman -a
   dh_perl -a
   dh_link -a
   jh_installlibs -a
   jh_classpath -a
   jh_manifest -a
   jh_exec -a
   jh_depends -a
   dh_compress -a
   dh_fixperms -a
   dh_strip -a
   dh_makeshlibs -a
   dh_shlibdeps -a
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libhmsbeagle1/usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so.21.0.0 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libhmsbeagle1/usr/lib/arm-linux-gnueabihf/libhmsbeagle.so.1.1.1 found in none of the libraries
   dh_installdeb -a
   dh_gencontrol -a
dpkg-gencontrol: warning: Depends field of package libhmsbeagle-dev: unknown substitution variable ${shlibs:Depends}
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: Depends field of package libhmsbeagle-java: unknown substitution variable ${shlibs:Depends}
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
   dh_md5sums -a
   dh_builddeb -a
dpkg-deb: building package `libhmsbeagle-dev' in `../libhmsbeagle-dev_2.1.2+20150609-1_armhf.deb'.
dpkg-deb: building package `libhmsbeagle-java' in `../libhmsbeagle-java_2.1.2+20150609-1_armhf.deb'.
dpkg-deb: building package `libhmsbeagle1' in `../libhmsbeagle1_2.1.2+20150609-1_armhf.deb'.
 dpkg-genchanges -B -mRaspbian wandboard test autobuilder <root@raspbian.org> >../libhmsbeagle_2.1.2+20150609-1_armhf.changes
dpkg-genchanges: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build libhmsbeagle-2.1.2+20150609
dpkg-buildpackage: binary-only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
Build finished at 20150724-0452

Finished
────────

I: Built successfully

┌──────────────────────────────────────────────────────────────────────────────┐
│ Post Build Chroot                                                            │
└──────────────────────────────────────────────────────────────────────────────┘


┌──────────────────────────────────────────────────────────────────────────────┐
│ Changes                                                                      │
└──────────────────────────────────────────────────────────────────────────────┘


libhmsbeagle_2.1.2+20150609-1_armhf.changes:
────────────────────────────────────────────

Format: 1.8
Date: Sat, 18 Jul 2015 20:35:03 +0200
Source: libhmsbeagle
Binary: libhmsbeagle-dev libhmsbeagle1 libhmsbeagle-java
Architecture: armhf
Version: 2.1.2+20150609-1
Distribution: stretch-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 libhmsbeagle-dev - High-performance lib for Bayesian and Maximum Likelihood phylogen
 libhmsbeagle-java - High-performance lib for Bayesian and Maximum Likelihood phylogen
 libhmsbeagle1 - High-performance lib for Bayesian and Maximum Likelihood phylogen
Changes:
 libhmsbeagle (2.1.2+20150609-1) unstable; urgency=medium
 .
   * New Git checkout featuring functionality used in beast-mcmc release
   * Moved from SVN to Git
   * Updated debian/copyright
Checksums-Sha1:
 9116902c902b3a07f43e561517a5bec5a5aaee30 149840 libhmsbeagle-dev_2.1.2+20150609-1_armhf.deb
 2bdce5136f5d666338b007ffe6872913e5d939f1 48460 libhmsbeagle1_2.1.2+20150609-1_armhf.deb
 d0c3b33830076c415393927353bca356affdb078 23614 libhmsbeagle-java_2.1.2+20150609-1_armhf.deb
Checksums-Sha256:
 9b38f06ca57b61003578d722d4bd32175f624921612e1b4fbee8da839fa06638 149840 libhmsbeagle-dev_2.1.2+20150609-1_armhf.deb
 adc7243b9029b1096bbe695073283829ad40f05a2aa8d79b026f48effb8494d7 48460 libhmsbeagle1_2.1.2+20150609-1_armhf.deb
 6ff2fed8284fee97b55bde0a87b3bb17552724f202d5a0a7cd8daa8c4e8d0f1a 23614 libhmsbeagle-java_2.1.2+20150609-1_armhf.deb
Files:
 6414c5aa03585c54a5ce5f17aac61518 149840 libdevel optional libhmsbeagle-dev_2.1.2+20150609-1_armhf.deb
 74611af6075b7882fb3326d0b5765ea2 48460 libs optional libhmsbeagle1_2.1.2+20150609-1_armhf.deb
 e2dcb8897c5ba68f456f41f9a84780d9 23614 java optional libhmsbeagle-java_2.1.2+20150609-1_armhf.deb

┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents                                                             │
└──────────────────────────────────────────────────────────────────────────────┘


libhmsbeagle-dev_2.1.2+20150609-1_armhf.deb
───────────────────────────────────────────

 new debian package, version 2.0.
 size 149840 bytes: control archive=4371 bytes.
    1248 bytes,    26 lines      control              
   10551 bytes,   119 lines      md5sums              
 Package: libhmsbeagle-dev
 Source: libhmsbeagle
 Version: 2.1.2+20150609-1
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 821
 Depends: libhmsbeagle1 (= 2.1.2+20150609-1)
 Section: libdevel
 Priority: optional
 Homepage: http://code.google.com/p/beagle-lib
 Description: High-performance lib for Bayesian and Maximum Likelihood phylogenetics (devel)
  BEAGLE is a high-performance library that can perform the core calculations at
  the heart of most Bayesian and Maximum Likelihood phylogenetics packages. It
  can make use of highly-parallel processors such as those in graphics cards
  (GPUs) found in many PCs.
  .
  The project involves an open API and fast implementations of a library for
  evaluating phylogenetic likelihoods (continuous time Markov processes) of
  biomolecular sequence evolution.
  .
  The aim is to provide high performance evaluation 'services' to a wide range
  of phylogenetic software, both Bayesian samplers and Maximum Likelihood
  optimizers.  This allows these packages to make use of implementations that
  make use of optimized hardware such as graphics processing units.
  .
  This package contains development files needed to build against Beagle library.

drwxr-xr-x root/root         0 2015-07-24 04:52 ./
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drwxr-xr-x root/root         0 2015-07-24 04:51 ./usr/include/
lrwxrwxrwx root/root         0 2015-07-24 04:51 ./usr/include/libhmsbeagle -> libhmsbeagle-2
drwxr-xr-x root/root         0 2015-07-24 04:51 ./usr/include/libhmsbeagle-1/
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libhmsbeagle1_2.1.2+20150609-1_armhf.deb
────────────────────────────────────────

 new debian package, version 2.0.
 size 48460 bytes: control archive=1296 bytes.
    1172 bytes,    24 lines      control              
     413 bytes,     5 lines      md5sums              
     135 bytes,     7 lines   *  postinst             #!/bin/sh
     132 bytes,     7 lines   *  postrm               #!/bin/sh
      94 bytes,     3 lines      shlibs               
 Package: libhmsbeagle1
 Source: libhmsbeagle
 Version: 2.1.2+20150609-1
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 157
 Depends: libc6 (>= 2.4), libgcc1 (>= 1:4.4.0), libstdc++6 (>= 4.6)
 Section: libs
 Priority: optional
 Homepage: http://code.google.com/p/beagle-lib
 Description: High-performance lib for Bayesian and Maximum Likelihood phylogenetics
  BEAGLE is a high-performance library that can perform the core calculations at
  the heart of most Bayesian and Maximum Likelihood phylogenetics packages. It
  can make use of highly-parallel processors such as those in graphics cards
  (GPUs) found in many PCs.
  .
  The project involves an open API and fast implementations of a library for
  evaluating phylogenetic likelihoods (continuous time Markov processes) of
  biomolecular sequence evolution.
  .
  The aim is to provide high performance evaluation 'services' to a wide range
  of phylogenetic software, both Bayesian samplers and Maximum Likelihood
  optimizers.  This allows these packages to make use of implementations that
  make use of optimized hardware such as graphics processing units.

drwxr-xr-x root/root         0 2015-07-24 04:52 ./
drwxr-xr-x root/root         0 2015-07-24 04:51 ./usr/
drwxr-xr-x root/root         0 2015-07-24 04:51 ./usr/lib/
drwxr-xr-x root/root         0 2015-07-24 04:52 ./usr/lib/arm-linux-gnueabihf/
drwxr-xr-x root/root         0 2015-07-24 04:52 ./usr/lib/arm-linux-gnueabihf/jni/
-rw-r--r-- root/root     17884 2015-07-24 04:52 ./usr/lib/arm-linux-gnueabihf/jni/libhmsbeagle-jni.so
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-rw-r--r-- root/root    108204 2015-07-24 04:52 ./usr/lib/arm-linux-gnueabihf/libhmsbeagle-cpu.so.21.0.0
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drwxr-xr-x root/root         0 2015-07-24 04:51 ./usr/share/
drwxr-xr-x root/root         0 2015-07-24 04:51 ./usr/share/doc/
drwxr-xr-x root/root         0 2015-07-24 04:52 ./usr/share/doc/libhmsbeagle1/
-rw-r--r-- root/root      1892 2015-07-18 18:35 ./usr/share/doc/libhmsbeagle1/changelog.Debian.gz
-rw-r--r-- root/root      1231 2015-07-18 18:35 ./usr/share/doc/libhmsbeagle1/copyright


libhmsbeagle-java_2.1.2+20150609-1_armhf.deb
────────────────────────────────────────────

 new debian package, version 2.0.
 size 23614 bytes: control archive=977 bytes.
    1161 bytes,    25 lines      control              
     237 bytes,     3 lines      md5sums              
 Package: libhmsbeagle-java
 Source: libhmsbeagle
 Version: 2.1.2+20150609-1
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 24
 Section: java
 Priority: optional
 Homepage: http://code.google.com/p/beagle-lib
 Description: High-performance lib for Bayesian and Maximum Likelihood phylogenetics (java)
  BEAGLE is a high-performance library that can perform the core calculations at
  the heart of most Bayesian and Maximum Likelihood phylogenetics packages. It
  can make use of highly-parallel processors such as those in graphics cards
  (GPUs) found in many PCs.
  .
  The project involves an open API and fast implementations of a library for
  evaluating phylogenetic likelihoods (continuous time Markov processes) of
  biomolecular sequence evolution.
  .
  The aim is to provide high performance evaluation 'services' to a wide range
  of phylogenetic software, both Bayesian samplers and Maximum Likelihood
  optimizers.  This allows these packages to make use of implementations that
  make use of optimized hardware such as graphics processing units.
  .
  This package contains the Java interface.

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drwxr-xr-x root/root         0 2015-07-24 04:51 ./usr/
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drwxr-xr-x root/root         0 2015-07-24 04:51 ./usr/share/doc/
drwxr-xr-x root/root         0 2015-07-24 04:52 ./usr/share/doc/libhmsbeagle-java/
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-rw-r--r-- root/root      1231 2015-07-18 18:35 ./usr/share/doc/libhmsbeagle-java/copyright
drwxr-xr-x root/root         0 2015-07-24 04:51 ./usr/share/java/
-rw-r--r-- root/root     20677 2015-07-24 04:51 ./usr/share/java/beagle-2.1.2+20150609.jar
lrwxrwxrwx root/root         0 2015-07-24 04:51 ./usr/share/java/beagle.jar -> beagle-2.1.2+20150609.jar


┌──────────────────────────────────────────────────────────────────────────────┐
│ Post Build                                                                   │
└──────────────────────────────────────────────────────────────────────────────┘


┌──────────────────────────────────────────────────────────────────────────────┐
│ Cleanup                                                                      │
└──────────────────────────────────────────────────────────────────────────────┘

Purging /«BUILDDIR»
Not cleaning session: cloned chroot in use

┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary                                                                      │
└──────────────────────────────────────────────────────────────────────────────┘

Build Architecture: armhf
Build-Space: 22876
Build-Time: 465
Distribution: stretch-staging
Host Architecture: armhf
Install-Time: 1046
Job: libhmsbeagle_2.1.2+20150609-1
Machine Architecture: armhf
Package: libhmsbeagle
Package-Time: 1573
Source-Version: 2.1.2+20150609-1
Space: 22876
Status: successful
Version: 2.1.2+20150609-1
────────────────────────────────────────────────────────────────────────────────
Finished at 20150724-0452
Build needed 00:26:13, 22876k disc space

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