libgenome →
1.3.11+svn20110227.4616-6 →
armhf → 2023-09-16 04:31:08
sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-01
+==============================================================================+
| libgenome 1.3.11+svn20110227.4616-6 (armhf) Sat, 16 Sep 2023 04:25:55 +0000 |
+==============================================================================+
Package: libgenome
Version: 1.3.11+svn20110227.4616-6
Source Version: 1.3.11+svn20110227.4616-6
Distribution: trixie-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/trixie-staging-armhf-sbuild-5ee92635-d167-461c-b14e-0910de3731d5' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.4.1/private trixie-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private trixie-staging/main Sources [14.1 MB]
Get:3 http://172.17.4.1/private trixie-staging/main armhf Packages [14.7 MB]
Fetched 28.7 MB in 12s (2368 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
W: http://172.17.4.1/private/dists/trixie-staging/InRelease: Key is stored in legacy trusted.gpg keyring (/etc/apt/trusted.gpg), see the DEPRECATION section in apt-key(8) for details.
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'libgenome' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/libgenome.git
Please use:
git clone https://salsa.debian.org/med-team/libgenome.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 94.5 kB of source archives.
Get:1 http://172.17.4.1/private trixie-staging/main libgenome 1.3.11+svn20110227.4616-6 (dsc) [2329 B]
Get:2 http://172.17.4.1/private trixie-staging/main libgenome 1.3.11+svn20110227.4616-6 (tar) [81.1 kB]
Get:3 http://172.17.4.1/private trixie-staging/main libgenome 1.3.11+svn20110227.4616-6 (diff) [11.0 kB]
Fetched 94.5 kB in 0s (1308 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/libgenome-1dLzq1/libgenome-1.3.11+svn20110227.4616' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/libgenome-1dLzq1' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-U271Vc/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-U271Vc/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-U271Vc/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-U271Vc/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-U271Vc/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-U271Vc/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-U271Vc/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-U271Vc/apt_archive ./ Packages [432 B]
Fetched 2108 B in 1s (3369 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
krb5-locales libpam-cap netbase sensible-utils sgml-base
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 7 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-U271Vc/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
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Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 11771 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), d-shlibs
Filtered Build-Depends: debhelper-compat (= 13), d-shlibs
dpkg-deb: building package 'sbuild-build-depends-libgenome-dummy' in '/<<BUILDDIR>>/resolver-U271Vc/apt_archive/sbuild-build-depends-libgenome-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-libgenome-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-U271Vc/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-U271Vc/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-U271Vc/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-U271Vc/apt_archive ./ Sources [498 B]
Get:5 copy:/<<BUILDDIR>>/resolver-U271Vc/apt_archive ./ Packages [581 B]
Fetched 2412 B in 1s (3809 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install libgenome build dependencies (apt-based resolver)
---------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
krb5-locales libpam-cap netbase sgml-base
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils d-shlibs debhelper
dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
groff-base intltool-debian libarchive-zip-perl libdebhelper-perl libelf1
libfile-stripnondeterminism-perl libicu72 libmagic-mgc libmagic1
libpipeline1 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db
po-debconf
Suggested packages:
autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc
libasprintf-dev libgettextpo-dev groff libtool-doc gfortran
| fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
libmail-box-perl
Recommended packages:
curl | wget | lynx libarchive-cpio-perl libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils d-shlibs debhelper
dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
groff-base intltool-debian libarchive-zip-perl libdebhelper-perl libelf1
libfile-stripnondeterminism-perl libicu72 libmagic-mgc libmagic1
libpipeline1 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db
po-debconf sbuild-build-depends-libgenome-dummy
0 upgraded, 31 newly installed, 0 to remove and 7 not upgraded.
Need to get 17.9 MB of archives.
After this operation, 69.7 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-U271Vc/apt_archive ./ sbuild-build-depends-libgenome-dummy 0.invalid.0 [868 B]
Get:2 http://172.17.4.1/private trixie-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:3 http://172.17.4.1/private trixie-staging/main armhf groff-base armhf 1.22.4-10 [774 kB]
Get:4 http://172.17.4.1/private trixie-staging/main armhf bsdextrautils armhf 2.38.1-5 [78.5 kB]
Get:5 http://172.17.4.1/private trixie-staging/main armhf libpipeline1 armhf 1.5.7-1 [33.4 kB]
Get:6 http://172.17.4.1/private trixie-staging/main armhf man-db armhf 2.11.2-2 [1342 kB]
Get:7 http://172.17.4.1/private trixie-staging/main armhf libmagic-mgc armhf 1:5.44-3 [305 kB]
Get:8 http://172.17.4.1/private trixie-staging/main armhf libmagic1 armhf 1:5.44-3 [95.3 kB]
Get:9 http://172.17.4.1/private trixie-staging/main armhf file armhf 1:5.44-3 [41.5 kB]
Get:10 http://172.17.4.1/private trixie-staging/main armhf gettext-base armhf 0.21-12 [156 kB]
Get:11 http://172.17.4.1/private trixie-staging/main armhf m4 armhf 1.4.19-3 [256 kB]
Get:12 http://172.17.4.1/private trixie-staging/main armhf autoconf all 2.71-3 [332 kB]
Get:13 http://172.17.4.1/private trixie-staging/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get:14 http://172.17.4.1/private trixie-staging/main armhf automake all 1:1.16.5-1.3 [823 kB]
Get:15 http://172.17.4.1/private trixie-staging/main armhf autopoint all 0.21-13 [496 kB]
Get:16 http://172.17.4.1/private trixie-staging/main armhf d-shlibs all 0.104 [18.6 kB]
Get:17 http://172.17.4.1/private trixie-staging/main armhf libdebhelper-perl all 13.11.6 [81.9 kB]
Get:18 http://172.17.4.1/private trixie-staging/main armhf libtool all 2.4.7-7 [517 kB]
Get:19 http://172.17.4.1/private trixie-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:20 http://172.17.4.1/private trixie-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:21 http://172.17.4.1/private trixie-staging/main armhf libsub-override-perl all 0.09-4 [9304 B]
Get:22 http://172.17.4.1/private trixie-staging/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB]
Get:23 http://172.17.4.1/private trixie-staging/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B]
Get:24 http://172.17.4.1/private trixie-staging/main armhf libelf1 armhf 0.188-2.1+rpi1 [171 kB]
Get:25 http://172.17.4.1/private trixie-staging/main armhf dwz armhf 0.15-1 [92.4 kB]
Get:26 http://172.17.4.1/private trixie-staging/main armhf libicu72 armhf 72.1-3 [9009 kB]
Get:27 http://172.17.4.1/private trixie-staging/main armhf libxml2 armhf 2.9.14+dfsg-1.3~deb12u1 [570 kB]
Get:28 http://172.17.4.1/private trixie-staging/main armhf gettext armhf 0.21-12 [1201 kB]
Get:29 http://172.17.4.1/private trixie-staging/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get:30 http://172.17.4.1/private trixie-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:31 http://172.17.4.1/private trixie-staging/main armhf debhelper all 13.11.6 [952 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Setting up libxml2:armhf (2.9.14+dfsg-1.3~deb12u1) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libfile-stripnondeterminism-perl (1.13.1-1) ...
Setting up gettext (0.21-12) ...
Setting up libtool (2.4.7-7) ...
Setting up intltool-debian (0.35.0+20060710.6) ...
Setting up dh-autoreconf (20) ...
Setting up dh-strip-nondeterminism (1.13.1-1) ...
Setting up dwz (0.15-1) ...
Setting up groff-base (1.22.4-10) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up man-db (2.11.2-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up debhelper (13.11.6) ...
Setting up sbuild-build-depends-libgenome-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.36-9+rpi1+deb12u1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.15.0-187-generic armhf (armv8l)
Toolchain package versions: binutils_2.40-2+rpi2 dpkg-dev_1.21.22+rpi1 g++-12_12.2.0-14+rpi1 gcc-12_12.2.0-14+rpi1 libc6-dev_2.36-9+rpi1+deb12u1 libstdc++-12-dev_12.2.0-14+rpi1 libstdc++6_12.2.0-14+rpi1 linux-libc-dev_6.1.38-1+rpi1
Package versions: adduser_3.137 apt_2.6.1 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-13 autotools-dev_20220109.1 base-files_12.4+rpi1+deb12u1 base-passwd_3.6.1 bash_5.2.15-2 binutils_2.40-2+rpi2 binutils-arm-linux-gnueabihf_2.40-2+rpi2 binutils-common_2.40-2+rpi2 bsdextrautils_2.38.1-5 bsdutils_1:2.38.1-5 build-essential_12.9 bzip2_1.0.8-5+b2 coreutils_9.1-1 cpp_4:12.2.0-3+rpi1 cpp-12_12.2.0-14+rpi1 d-shlibs_0.104 dash_0.5.12-2 debconf_1.5.82 debhelper_13.11.6 debianutils_5.7-0.4 dh-autoreconf_20 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.8-4 dirmngr_2.2.40-1.1 dpkg_1.21.22+rpi1 dpkg-dev_1.21.22+rpi1 dwz_0.15-1 e2fsprogs_1.47.0-2 fakeroot_1.31-1.2 file_1:5.44-3 findutils_4.9.0-4 g++_4:12.2.0-3+rpi1 g++-12_12.2.0-14+rpi1 gcc_4:12.2.0-3+rpi1 gcc-12_12.2.0-14+rpi1 gcc-12-base_12.2.0-14+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.4.0-2+rpi1 gettext_0.21-12 gettext-base_0.21-12 gnupg_2.2.40-1.1 gnupg-l10n_2.2.40-1.1 gnupg-utils_2.2.40-1.1 gpg_2.2.40-1.1 gpg-agent_2.2.40-1.1 gpg-wks-client_2.2.40-1.1 gpg-wks-server_2.2.40-1.1 gpgconf_2.2.40-1.1 gpgsm_2.2.40-1.1 gpgv_2.2.40-1.1 grep_3.8-5 groff-base_1.22.4-10 gzip_1.12-1 hostname_3.23+nmu1 init-system-helpers_1.65.2 intltool-debian_0.35.0+20060710.6 iputils-ping_3:20221126-1 krb5-locales_1.20.1-3 libacl1_2.3.1-3 libapt-pkg6.0_2.6.1 libarchive-zip-perl_1.68-1 libasan8_12.2.0-14+rpi1 libassuan0_2.5.5-5 libatomic1_12.2.0-14+rpi1 libattr1_1:2.5.1-4 libaudit-common_1:3.1.1-1 libaudit1_1:3.0.9-1 libbinutils_2.40-2+rpi2 libblkid1_2.38.1-5 libbz2-1.0_1.0.8-5+b2 libc-bin_2.36-9+rpi1+deb12u1 libc-dev-bin_2.36-9+rpi1+deb12u1 libc6_2.36-9+rpi1+deb12u1 libc6-dev_2.36-9+rpi1+deb12u1 libcap-ng0_0.8.3-1+b1 libcap2_1:2.66-4 libcap2-bin_1:2.66-4 libcc1-0_12.2.0-14+rpi1 libcom-err2_1.47.0-2 libcrypt-dev_1:4.4.33-2 libcrypt1_1:4.4.33-2 libctf-nobfd0_2.40-2+rpi2 libctf0_2.40-2+rpi2 libdb5.3_5.3.28+dfsg2-1 libdebconfclient0_0.270 libdebhelper-perl_13.11.6 libdpkg-perl_1.21.22+rpi1 libelf1_0.188-2.1+rpi1 libext2fs2_1.47.0-2 libfakeroot_1.31-1.2 libffi8_3.4.4-1 libfile-find-rule-perl_0.34-3 libfile-stripnondeterminism-perl_1.13.1-1 libgcc-12-dev_12.2.0-14+rpi1 libgcc-s1_12.2.0-14+rpi1 libgcrypt20_1.10.1-3 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgmp10_2:6.2.1+dfsg1-1.1 libgnutls30_3.7.9-2 libgomp1_12.2.0-14+rpi1 libgpg-error0_1.46-1 libgssapi-krb5-2_1.20.1-2 libhogweed6_3.8.1-2 libicu72_72.1-3 libidn2-0_2.3.3-1+b2 libisl23_0.25-1 libjansson4_2.14-2 libk5crypto3_1.20.1-2 libkeyutils1_1.6.3-2 libkrb5-3_1.20.1-2 libkrb5support0_1.20.1-2 libksba8_1.6.3-2 libldap-2.5-0_2.5.13+dfsg-5+rpi1 liblz4-1_1.9.4-1+rpi1+b1 liblzma5_5.4.1-0.2 libmagic-mgc_1:5.44-3 libmagic1_1:5.44-3 libmd0_1.0.4-2 libmount1_2.38.1-5 libmpc3_1.3.1-1 libmpfr6_4.2.0-1 libncursesw6_6.4-4 libnettle8_3.8.1-2 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnumber-compare-perl_0.03-3 libp11-kit0_0.24.1-2 libpam-cap_1:2.66-4 libpam-modules_1.5.2-6 libpam-modules-bin_1.5.2-6 libpam-runtime_1.5.2-7 libpam0g_1.5.2-6 libpcre2-8-0_10.42-1 libpcre3_2:8.39-15 libperl5.36_5.36.0-7 libpipeline1_1.5.7-1 libreadline8_8.2-1.3 libsasl2-2_2.1.28+dfsg-10 libsasl2-modules-db_2.1.28+dfsg-10 libseccomp2_2.5.4-1+rpi1+b1 libselinux1_3.4-1+b2 libsemanage-common_3.5-1 libsemanage2_3.4-1+b2 libsepol1_3.1-1 libsepol2_3.4-2.1 libsmartcols1_2.38.1-5 libsqlite3-0_3.40.1-2 libss2_1.47.0-2 libssl1.1_1.1.1o-1 libssl3_3.0.9-1 libstdc++-12-dev_12.2.0-14+rpi1 libstdc++6_12.2.0-14+rpi1 libsub-override-perl_0.09-4 libsystemd0_252.12-1~deb12u1+rpi1 libtasn1-6_4.19.0-2 libtext-glob-perl_0.11-3 libtinfo6_6.4-4 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtool_2.4.7-7 libubsan1_12.2.0-14+rpi1 libuchardet0_0.0.7-1 libudev1_252.12-1~deb12u1+rpi1 libunistring2_1.0-2 libuuid1_2.38.1-5 libxml2_2.9.14+dfsg-1.3~deb12u1 libxxhash0_0.8.1-1 libzstd1_1.5.4+dfsg2-5 linux-libc-dev_6.1.38-1+rpi1 login_1:4.13+dfsg1-1 logsave_1.47.0-2 lsb-base_11.6+rpi1 m4_1.4.19-3 make_4.3-4.1 man-db_2.11.2-2 mawk_1.3.4.20200120-3.1 mount_2.38.1-5 nano_7.2-1 ncurses-base_6.4+20230625-2 ncurses-bin_6.4-4 netbase_6.4 passwd_1:4.13+dfsg1-1 patch_2.7.6-7 perl_5.36.0-7 perl-base_5.36.0-7 perl-modules-5.36_5.36.0-7 pinentry-curses_1.2.1-1 po-debconf_1.0.21+nmu1 raspbian-archive-keyring_20120528.2 readline-common_8.2-1.3 rpcsvc-proto_1.4.3-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-libgenome-dummy_0.invalid.0 sed_4.9-1 sensible-utils_0.0.20 sgml-base_1.31 sysvinit-utils_3.06-4 tar_1.34+dfsg-1.2 tzdata_2023c-10 usrmerge_37 util-linux_2.38.1-5 util-linux-extra_2.38.1-5 xz-utils_5.4.1-0.2 zlib1g_1:1.2.13.dfsg-1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: Signature made Tue Jul 18 13:07:14 2023 UTC
gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA
gpgv: issuer "emollier@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./libgenome_1.3.11+svn20110227.4616-6.dsc: no acceptable signature found
dpkg-source: info: extracting libgenome in /<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616
dpkg-source: info: unpacking libgenome_1.3.11+svn20110227.4616.orig.tar.xz
dpkg-source: info: unpacking libgenome_1.3.11+svn20110227.4616-6.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying gcc-6.1.patch
dpkg-source: info: applying drop-version-number.patch
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=trixie-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=trixie-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=trixie-staging-armhf-sbuild-5ee92635-d167-461c-b14e-0910de3731d5
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package libgenome
dpkg-buildpackage: info: source version 1.3.11+svn20110227.4616-6
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean
dh_clean
debian/rules binary-arch
dh binary-arch
dh_update_autotools_config -a
dh_autoreconf -a
libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'config'.
libtoolize: copying file 'config/ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
configure.ac:61: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated.
./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from...
aclocal.m4:429: AM_INIT_AUTOMAKE is expanded from...
configure.ac:61: the top level
configure.ac:70: warning: The macro `AC_PROG_LIBTOOL' is obsolete.
configure.ac:70: You should run autoupdate.
m4/libtool.m4:100: AC_PROG_LIBTOOL is expanded from...
configure.ac:70: the top level
configure.ac:73: warning: The macro `AM_PROG_LIBTOOL' is obsolete.
configure.ac:73: You should run autoupdate.
m4/libtool.m4:101: AM_PROG_LIBTOOL is expanded from...
configure.ac:73: the top level
configure.ac:77: warning: The macro `AC_HEADER_STDC' is obsolete.
configure.ac:77: You should run autoupdate.
./lib/autoconf/headers.m4:704: AC_HEADER_STDC is expanded from...
configure.ac:77: the top level
configure.ac:99: warning: 'AM_CONFIG_HEADER': this macro is obsolete.
configure.ac:99: You should use the 'AC_CONFIG_HEADERS' macro instead.
./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from...
aclocal.m4:745: AM_CONFIG_HEADER is expanded from...
configure.ac:99: the top level
configure.ac:116: warning: The macro `AC_HEADER_TIME' is obsolete.
configure.ac:116: You should run autoupdate.
./lib/autoconf/headers.m4:743: AC_HEADER_TIME is expanded from...
configure.ac:116: the top level
configure.ac:124: warning: AC_OUTPUT should be used without arguments.
configure.ac:124: You should run autoupdate.
configure.ac:61: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. For more info, see:
configure.ac:61: https://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation
configure.ac:68: installing 'config/compile'
configure.ac:8: installing 'config/config.guess'
configure.ac:8: installing 'config/config.sub'
configure.ac:61: installing 'config/install-sh'
configure.ac:61: installing 'config/missing'
Makefile.am: installing './INSTALL'
Makefile.am: installing './COPYING' using GNU General Public License v3 file
Makefile.am: Consider adding the COPYING file to the version control system
Makefile.am: for your code, to avoid questions about which license your project uses
libGenome/Makefile.am:44: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
libGenome/Makefile.am: installing 'config/depcomp'
dh_auto_configure -a
./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking
checking build system type... arm-unknown-linux-gnueabihf
checking host system type... arm-unknown-linux-gnueabihf
checking target system type... arm-unknown-linux-gnueabihf
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a race-free mkdir -p... /usr/bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether gcc accepts -g... yes
checking for gcc option to enable C11 features... none needed
checking whether gcc understands -c and -o together... yes
checking whether make supports the include directive... yes (GNU style)
checking dependency style of gcc... none
checking for g++... g++
checking whether the compiler supports GNU C++... yes
checking whether g++ accepts -g... yes
checking for g++ option to enable C++11 features... none needed
checking dependency style of g++... none
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop
checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for file... file
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /usr/bin/dd
checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1
checking for mt... no
checking if : is a manifest tool... no
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for sys/time.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking how to run the C++ preprocessor... g++ -E
checking for ld used by g++... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking for g++ option to produce PIC... -fPIC -DPIC
checking if g++ PIC flag -fPIC -DPIC works... yes
checking if g++ static flag -static works... yes
checking if g++ supports -c -o file.o... yes
checking if g++ supports -c -o file.o... (cached) yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether ln -s works... yes
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... 64
checking for egrep... (cached) /usr/bin/grep -E
checking for doxygen... no
configure: WARNING: doxygen not found - will not generate any doxygen documentation
checking for perl... /usr/bin/perl
checking for an ANSI C-conforming const... yes
checking for inline... inline
checking how to run the C preprocessor... gcc -E
checking whether gcc needs -traditional... no
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating libGenome/Makefile
config.status: creating libGenome.pc
config.status: creating config.h
config.status: executing depfiles commands
config.status: executing libtool commands
dh_auto_build -a
make -j4
make[1]: Entering directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
make all-recursive
make[2]: Entering directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
Making all in libGenome
make[3]: Entering directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/libGenome'
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnFilter.lo gnFilter.cpp
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnCompare.lo gnCompare.cpp
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnTranslator.lo gnTranslator.cpp
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnSourceFactory.lo gnSourceFactory.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnFilter.cpp -fPIC -DPIC -o .libs/gnFilter.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnTranslator.cpp -fPIC -DPIC -o .libs/gnTranslator.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnSourceFactory.cpp -fPIC -DPIC -o .libs/gnSourceFactory.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnCompare.cpp -fPIC -DPIC -o .libs/gnCompare.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnFilter.cpp -o gnFilter.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnCompare.cpp -o gnCompare.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnFeature.lo gnFeature.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnFeature.cpp -fPIC -DPIC -o .libs/gnFeature.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnSourceQualifier.lo gnSourceQualifier.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnSourceQualifier.cpp -fPIC -DPIC -o .libs/gnSourceQualifier.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnSourceFactory.cpp -o gnSourceFactory.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnSourceQualifier.cpp -o gnSourceQualifier.o >/dev/null 2>&1
In file included from /usr/include/c++/12/vector:70,
from ../libGenome/gnFeature.h:22,
from gnFeature.cpp:16:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const genome::gnLocation&}; _Tp = genome::gnLocation; _Alloc = std::allocator<genome::gnLocation>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<genome::gnLocation>::iterator' changed in GCC 7.1
439 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = genome::gnLocation; _Alloc = std::allocator<genome::gnLocation>]',
inlined from 'genome::gnFeature::gnFeature(const genome::gnFeature&)' at gnFeature.cpp:47:27:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<genome::gnLocation*, std::vector<genome::gnLocation> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnTranslator.cpp -o gnTranslator.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnFeature.cpp -o gnFeature.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnFileContig.lo gnFileContig.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnFileContig.cpp -fPIC -DPIC -o .libs/gnFileContig.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnFileContig.cpp -o gnFileContig.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnSourceSpec.lo gnSourceSpec.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnSourceSpec.cpp -fPIC -DPIC -o .libs/gnSourceSpec.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnFileSource.lo gnFileSource.cpp
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnFASSource.lo gnFASSource.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnFileSource.cpp -fPIC -DPIC -o .libs/gnFileSource.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnFASSource.cpp -fPIC -DPIC -o .libs/gnFASSource.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnSourceSpec.cpp -o gnSourceSpec.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnFileSource.cpp -o gnFileSource.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnFragmentSpec.lo gnFragmentSpec.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnFragmentSpec.cpp -fPIC -DPIC -o .libs/gnFragmentSpec.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnStringSpec.lo gnStringSpec.cpp
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnGBKSource.lo gnGBKSource.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnStringSpec.cpp -fPIC -DPIC -o .libs/gnStringSpec.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnGBKSource.cpp -fPIC -DPIC -o .libs/gnGBKSource.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnFASSource.cpp -o gnFASSource.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnStringSpec.cpp -o gnStringSpec.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnStringTools.lo gnStringTools.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnStringTools.cpp -fPIC -DPIC -o .libs/gnStringTools.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnFragmentSpec.cpp -o gnFragmentSpec.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnStringTools.cpp -o gnStringTools.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnGenomeSpec.lo gnGenomeSpec.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnGenomeSpec.cpp -fPIC -DPIC -o .libs/gnGenomeSpec.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnLocation.lo gnLocation.cpp
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnRAWSource.lo gnRAWSource.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnLocation.cpp -fPIC -DPIC -o .libs/gnLocation.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnRAWSource.cpp -fPIC -DPIC -o .libs/gnRAWSource.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnGBKSource.cpp -o gnGBKSource.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnLocation.cpp -o gnLocation.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnRAWSource.cpp -o gnRAWSource.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnBaseFeature.lo gnBaseFeature.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnBaseFeature.cpp -fPIC -DPIC -o .libs/gnBaseFeature.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnGenomeSpec.cpp -o gnGenomeSpec.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnSEQSource.lo gnSEQSource.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnSEQSource.cpp -fPIC -DPIC -o .libs/gnSEQSource.o
In file included from /usr/include/c++/12/vector:70,
from ../libGenome/gnBaseFeature.h:21,
from gnBaseFeature.cpp:16:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const genome::gnLocation&}; _Tp = genome::gnLocation; _Alloc = std::allocator<genome::gnLocation>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<genome::gnLocation>::iterator' changed in GCC 7.1
439 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = genome::gnLocation; _Alloc = std::allocator<genome::gnLocation>]',
inlined from 'virtual boolean genome::gnBaseFeature::AddLocation(const genome::gnLocation&, uint32)' at gnBaseFeature.cpp:197:24:
/usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<genome::gnLocation*, std::vector<genome::gnLocation> >' changed in GCC 7.1
164 | _M_realloc_insert(begin() + (__position - cbegin()), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnBaseFeature.cpp -o gnBaseFeature.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnSequence.lo gnSequence.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnSequence.cpp -fPIC -DPIC -o .libs/gnSequence.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnContigSpec.lo gnContigSpec.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnContigSpec.cpp -fPIC -DPIC -o .libs/gnContigSpec.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnSourceHeader.lo gnSourceHeader.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnSourceHeader.cpp -fPIC -DPIC -o .libs/gnSourceHeader.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnContigSpec.cpp -o gnContigSpec.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnSourceHeader.cpp -o gnSourceHeader.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnSEQSource.cpp -o gnSEQSource.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnSequence.cpp -o gnSequence.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnException.lo gnException.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnException.cpp -fPIC -DPIC -o .libs/gnException.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnFastTranslator.lo gnFastTranslator.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnFastTranslator.cpp -fPIC -DPIC -o .libs/gnFastTranslator.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnException.cpp -o gnException.o >/dev/null 2>&1
In file included from /usr/include/c++/12/vector:70,
from ../libGenome/gnFastTranslator.h:23,
from gnFastTranslator.cpp:16:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
439 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
inlined from 'virtual void genome::gnFastTranslator::CacheTranslator(const genome::gnTranslator*, std::string, gnSeqI)' at gnFastTranslator.cpp:143:18:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnFastTranslator.cpp -o gnFastTranslator.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnPosSpecificTranslator.lo gnPosSpecificTranslator.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnPosSpecificTranslator.cpp -fPIC -DPIC -o .libs/gnPosSpecificTranslator.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnPosSpecificTranslator.cpp -o gnPosSpecificTranslator.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnDefs.lo gnDefs.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnDefs.cpp -fPIC -DPIC -o .libs/gnDefs.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnDefs.cpp -o gnDefs.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 1:3:1 -Wl,-z,relro -Wl,-z,now -o libGenome.la -rpath /usr/lib/arm-linux-gnueabihf gnFilter.lo gnCompare.lo gnTranslator.lo gnSourceFactory.lo gnFeature.lo gnSourceQualifier.lo gnFileContig.lo gnSourceSpec.lo gnFileSource.lo gnFASSource.lo gnFragmentSpec.lo gnStringSpec.lo gnGBKSource.lo gnStringTools.lo gnGenomeSpec.lo gnLocation.lo gnRAWSource.lo gnBaseFeature.lo gnSEQSource.lo gnSequence.lo gnContigSpec.lo gnSourceHeader.lo gnException.lo gnFastTranslator.lo gnPosSpecificTranslator.lo gnDefs.lo
libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/12/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/12/crtbeginS.o .libs/gnFilter.o .libs/gnCompare.o .libs/gnTranslator.o .libs/gnSourceFactory.o .libs/gnFeature.o .libs/gnSourceQualifier.o .libs/gnFileContig.o .libs/gnSourceSpec.o .libs/gnFileSource.o .libs/gnFASSource.o .libs/gnFragmentSpec.o .libs/gnStringSpec.o .libs/gnGBKSource.o .libs/gnStringTools.o .libs/gnGenomeSpec.o .libs/gnLocation.o .libs/gnRAWSource.o .libs/gnBaseFeature.o .libs/gnSEQSource.o .libs/gnSequence.o .libs/gnContigSpec.o .libs/gnSourceHeader.o .libs/gnException.o .libs/gnFastTranslator.o .libs/gnPosSpecificTranslator.o .libs/gnDefs.o -L/usr/lib/gcc/arm-linux-gnueabihf/12 -L/usr/lib/gcc/arm-linux-gnueabihf/12/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/12/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/12/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/12/../../../arm-linux-gnueabihf/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libGenome.so.0 -o .libs/libGenome.so.0.1.3
libtool: link: (cd ".libs" && rm -f "libGenome.so.0" && ln -s "libGenome.so.0.1.3" "libGenome.so.0")
libtool: link: (cd ".libs" && rm -f "libGenome.so" && ln -s "libGenome.so.0.1.3" "libGenome.so")
libtool: link: ar cr .libs/libGenome.a gnFilter.o gnCompare.o gnTranslator.o gnSourceFactory.o gnFeature.o gnSourceQualifier.o gnFileContig.o gnSourceSpec.o gnFileSource.o gnFASSource.o gnFragmentSpec.o gnStringSpec.o gnGBKSource.o gnStringTools.o gnGenomeSpec.o gnLocation.o gnRAWSource.o gnBaseFeature.o gnSEQSource.o gnSequence.o gnContigSpec.o gnSourceHeader.o gnException.o gnFastTranslator.o gnPosSpecificTranslator.o gnDefs.o
libtool: link: ranlib .libs/libGenome.a
libtool: link: ( cd ".libs" && rm -f "libGenome.la" && ln -s "../libGenome.la" "libGenome.la" )
make[3]: Leaving directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/libGenome'
make[3]: Entering directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
make[3]: Leaving directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
make[2]: Leaving directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
make[1]: Leaving directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
debian/rules override_dh_auto_test
make[1]: Entering directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
echo 'Disable test since some header (gnDNXSource.h) seems to be missing.'
Disable test since some header (gnDNXSource.h) seems to be missing.
make[1]: Leaving directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
create-stamp debian/debhelper-build-stamp
dh_prep -a
dh_auto_install -a
make -j1 install DESTDIR=/<<BUILDDIR>>/libgenome-1.3.11\+svn20110227.4616/debian/tmp AM_UPDATE_INFO_DIR=no
make[1]: Entering directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
Making install in libGenome
make[2]: Entering directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/libGenome'
make[3]: Entering directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/libGenome'
/usr/bin/mkdir -p '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/lib/arm-linux-gnueabihf'
/bin/bash ../libtool --mode=install /usr/bin/install -c libGenome.la '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/libGenome.so.0.1.3 /<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/lib/arm-linux-gnueabihf/libGenome.so.0.1.3
libtool: install: (cd /<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libGenome.so.0.1.3 libGenome.so.0 || { rm -f libGenome.so.0 && ln -s libGenome.so.0.1.3 libGenome.so.0; }; })
libtool: install: (cd /<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libGenome.so.0.1.3 libGenome.so || { rm -f libGenome.so && ln -s libGenome.so.0.1.3 libGenome.so; }; })
libtool: install: /usr/bin/install -c .libs/libGenome.lai /<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/lib/arm-linux-gnueabihf/libGenome.la
libtool: install: /usr/bin/install -c .libs/libGenome.a /<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/lib/arm-linux-gnueabihf/libGenome.a
libtool: install: chmod 644 /<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/lib/arm-linux-gnueabihf/libGenome.a
libtool: install: ranlib /<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/lib/arm-linux-gnueabihf/libGenome.a
libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf'
/usr/bin/mkdir -p '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/include/libGenome'
/usr/bin/install -c -m 644 gnABISource.h gnDataBaseSource.h gnLocation.h gnSetup.h gnBaseFeature.h gnDebug.h gnMultiSpec.h gnSourceFactory.h gnBaseFilter.h gnDefs.h gnSourceHeader.h gnPosSpecificTranslator.h gnBaseHeader.h gnFASSource.h gnSourceQualifier.h gnBaseQualifier.h gnSourceSpec.h gnStringQualifier.h gnBaseSource.h gnFeature.h gnProteinSequence.h gnStringHeader.h gnBaseSpec.h gnFileContig.h gnRAWSource.h gnClone.h gnFileSource.h gnRNASequence.h gnStringSpec.h gnCompare.h gnFilter.h gnSEQSource.h gnStringTools.h gnContigSpec.h gnFragmentSpec.h gnTranslator.h gnDNASequence.h gnGBKSource.h gnVersion.h gnFastTranslator.h '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/include/libGenome'
/usr/bin/install -c -m 644 gnGenomeSpec.h gnSequence.h gnException.h gnExceptionCode.h IntervalSequenceTree.h OmpGuard.h '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/include/libGenome'
make[3]: Leaving directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/libGenome'
make[2]: Leaving directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/libGenome'
make[2]: Entering directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
make[3]: Entering directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
make[3]: Nothing to be done for 'install-exec-am'.
/usr/bin/mkdir -p '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig'
/usr/bin/install -c -m 644 libGenome.pc '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig'
make[3]: Leaving directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
make[2]: Leaving directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
make[1]: Leaving directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
debian/rules override_dh_install
make[1]: Entering directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
dh_install
# Call d-shlibmove to comply with library packaging guide
# mv debian/tmp/usr/include/*/* debian/tmp/usr/include/
d-shlibmove --commit \
--multiarch \
--devunversioned \
--exclude-la \
--movedev debian/tmp/usr/include/* usr/include \
--movedev "debian/tmp/usr/lib/*/pkgconfig/*.pc" usr/lib/arm-linux-gnueabihf/pkgconfig \
debian/tmp/usr/lib/*/*.so
Library package automatic movement utility
set -e
install -d -m 755 debian/libgenome-dev/usr/lib/arm-linux-gnueabihf
install -d -m 755 debian/libgenome0/usr/lib/arm-linux-gnueabihf
mv debian/tmp/usr/lib/arm-linux-gnueabihf/libGenome.a debian/libgenome-dev/usr/lib/arm-linux-gnueabihf
mv debian/tmp/usr/lib/arm-linux-gnueabihf/libGenome.so debian/libgenome-dev/usr/lib/arm-linux-gnueabihf
mv /<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/lib/arm-linux-gnueabihf/libGenome.so.0 debian/libgenome0/usr/lib/arm-linux-gnueabihf
mv /<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/lib/arm-linux-gnueabihf/libGenome.so.0.1.3 debian/libgenome0/usr/lib/arm-linux-gnueabihf
PKGDEV=libgenome-dev
PKGSHL=libgenome0
install -d -m 755 debian/libgenome-dev/usr/include
mv debian/tmp/usr/include/libGenome debian/libgenome-dev/usr/include
install -d -m 755 debian/libgenome-dev/usr/lib/arm-linux-gnueabihf/pkgconfig
mv debian/tmp/usr/lib/*/pkgconfig/*.pc debian/libgenome-dev/usr/lib/arm-linux-gnueabihf/pkgconfig
find debian -name libGenome.la -delete
make[1]: Leaving directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
dh_installdocs -a
dh_installchangelogs -a
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
dh_compress -a
dh_fixperms -a
dh_missing -a
dh_dwz -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libgenome0/usr/lib/arm-linux-gnueabihf/libGenome.so.0.1.3 found in none of the libraries
dh_installdeb -a
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'libgenome0' in '../libgenome0_1.3.11+svn20110227.4616-6_armhf.deb'.
dpkg-deb: building package 'libgenome0-dbgsym' in '../libgenome0-dbgsym_1.3.11+svn20110227.4616-6_armhf.deb'.
dpkg-deb: building package 'libgenome-dev' in '../libgenome-dev_1.3.11+svn20110227.4616-6_armhf.deb'.
dpkg-genbuildinfo --build=any -O../libgenome_1.3.11+svn20110227.4616-6_armhf.buildinfo
dpkg-genchanges --build=any -mRaspbian mythic lxc autobuilder 1 <root@raspbian.org> -O../libgenome_1.3.11+svn20110227.4616-6_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2023-09-16T04:31:03Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
libgenome_1.3.11+svn20110227.4616-6_armhf.changes:
--------------------------------------------------
Format: 1.8
Date: Tue, 18 Jul 2023 14:57:43 +0200
Source: libgenome
Binary: libgenome-dev libgenome0 libgenome0-dbgsym
Architecture: armhf
Version: 1.3.11+svn20110227.4616-6
Distribution: trixie-staging
Urgency: medium
Maintainer: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Changed-By: Étienne Mollier <emollier@debian.org>
Description:
libgenome-dev - toolkit for developing bioinformatic related software (devel)
libgenome0 - toolkit for developing bioinformatic related software
Closes: 1015488 1037728
Changes:
libgenome (1.3.11+svn20110227.4616-6) unstable; urgency=medium
.
* d/libgenome0.symbols.amd64: update.
Mark symbols optimized out by LTO as optional. This has also the side
effect of resolving build issues encountered with Gcc 13.
(Closes: #1015488, #1037728)
* d/control: declare compliance to standards version 4.6.2.
Checksums-Sha1:
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312e055f6fc35b16704bf9dd5146b6d291b117e2 99892 libgenome0_1.3.11+svn20110227.4616-6_armhf.deb
e2dcdb126a7afb41838bca59c8957bbbf7cf9cd9 6671 libgenome_1.3.11+svn20110227.4616-6_armhf.buildinfo
Checksums-Sha256:
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Files:
1ae130398423d26f93fafdb1261412ff 168348 libdevel optional libgenome-dev_1.3.11+svn20110227.4616-6_armhf.deb
1ac6c9c3a199a171f10a18997fb587da 1684784 debug optional libgenome0-dbgsym_1.3.11+svn20110227.4616-6_armhf.deb
a9a1e80b782f9bd7b7599d39848db3f5 99892 libs optional libgenome0_1.3.11+svn20110227.4616-6_armhf.deb
1abc00449f73d2f443e9a19a08f0ca9f 6671 science optional libgenome_1.3.11+svn20110227.4616-6_armhf.buildinfo
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
libgenome-dev_1.3.11+svn20110227.4616-6_armhf.deb
-------------------------------------------------
new Debian package, version 2.0.
size 168348 bytes: control archive=2244 bytes.
1059 bytes, 27 lines control
3740 bytes, 52 lines md5sums
Package: libgenome-dev
Source: libgenome
Version: 1.3.11+svn20110227.4616-6
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1050
Depends: libgenome0 (= 1.3.11+svn20110227.4616-6)
Provides: libgenome-1.3-dev
Section: libdevel
Priority: optional
Multi-Arch: same
Homepage: https://sourceforge.net/projects/libgenome/
Description: toolkit for developing bioinformatic related software (devel)
libGenome is a freely available toolkit for developing bioinformatic related
software in C++. It is intended to take the hassle out of performing common
tasks on genetic sequence and annotation data.
.
Among other things, libGenome can help you:
.
* Read and write Multi-FastA format files
* Read and write GenBank flat file database entries
* Append, chop, truncate, reverse, complement, translate, and otherwise
mangle sequence data
* Access annotation in GenBank flat files
.
This is the development package containing the statically linked
library and the header files.
drwxr-xr-x root/root 0 2023-07-18 12:57 ./
drwxr-xr-x root/root 0 2023-07-18 12:57 ./usr/
drwxr-xr-x root/root 0 2023-07-18 12:57 ./usr/include/
drwxr-xr-x root/root 0 2023-07-18 12:57 ./usr/include/libGenome/
-rw-r--r-- root/root 22112 2023-07-18 12:57 ./usr/include/libGenome/IntervalSequenceTree.h
-rw-r--r-- root/root 1939 2023-07-18 12:57 ./usr/include/libGenome/OmpGuard.h
-rw-r--r-- root/root 2621 2023-07-18 12:57 ./usr/include/libGenome/gnABISource.h
-rw-r--r-- root/root 11124 2023-07-18 12:57 ./usr/include/libGenome/gnBaseFeature.h
-rw-r--r-- root/root 1939 2023-07-18 12:57 ./usr/include/libGenome/gnBaseFilter.h
-rw-r--r-- root/root 1943 2023-07-18 12:57 ./usr/include/libGenome/gnBaseHeader.h
-rw-r--r-- root/root 1796 2023-07-18 12:57 ./usr/include/libGenome/gnBaseQualifier.h
-rw-r--r-- root/root 5898 2023-07-18 12:57 ./usr/include/libGenome/gnBaseSource.h
-rw-r--r-- root/root 4693 2023-07-18 12:57 ./usr/include/libGenome/gnBaseSpec.h
-rw-r--r-- root/root 834 2023-07-18 12:57 ./usr/include/libGenome/gnClone.h
-rw-r--r-- root/root 5851 2023-07-18 12:57 ./usr/include/libGenome/gnCompare.h
-rw-r--r-- root/root 4548 2023-07-18 12:57 ./usr/include/libGenome/gnContigSpec.h
-rw-r--r-- root/root 3967 2023-07-18 12:57 ./usr/include/libGenome/gnDNASequence.h
-rw-r--r-- root/root 1815 2023-07-18 12:57 ./usr/include/libGenome/gnDataBaseSource.h
-rw-r--r-- root/root 1559 2023-07-18 12:57 ./usr/include/libGenome/gnDebug.h
-rw-r--r-- root/root 6166 2023-07-18 12:57 ./usr/include/libGenome/gnDefs.h
-rw-r--r-- root/root 1692 2023-07-18 12:57 ./usr/include/libGenome/gnException.h
-rw-r--r-- root/root 2969 2023-07-18 12:57 ./usr/include/libGenome/gnExceptionCode.h
-rw-r--r-- root/root 4847 2023-07-18 12:57 ./usr/include/libGenome/gnFASSource.h
-rw-r--r-- root/root 3139 2023-07-18 12:57 ./usr/include/libGenome/gnFastTranslator.h
-rw-r--r-- root/root 1827 2023-07-18 12:57 ./usr/include/libGenome/gnFeature.h
-rw-r--r-- root/root 5298 2023-07-18 12:57 ./usr/include/libGenome/gnFileContig.h
-rw-r--r-- root/root 2246 2023-07-18 12:57 ./usr/include/libGenome/gnFileSource.h
-rw-r--r-- root/root 5721 2023-07-18 12:57 ./usr/include/libGenome/gnFilter.h
-rw-r--r-- root/root 4699 2023-07-18 12:57 ./usr/include/libGenome/gnFragmentSpec.h
-rw-r--r-- root/root 4442 2023-07-18 12:57 ./usr/include/libGenome/gnGBKSource.h
-rw-r--r-- root/root 3924 2023-07-18 12:57 ./usr/include/libGenome/gnGenomeSpec.h
-rw-r--r-- root/root 11315 2023-07-18 12:57 ./usr/include/libGenome/gnLocation.h
-rw-r--r-- root/root 13275 2023-07-18 12:57 ./usr/include/libGenome/gnMultiSpec.h
-rw-r--r-- root/root 2346 2023-07-18 12:57 ./usr/include/libGenome/gnPosSpecificTranslator.h
-rw-r--r-- root/root 4168 2023-07-18 12:57 ./usr/include/libGenome/gnProteinSequence.h
-rw-r--r-- root/root 3717 2023-07-18 12:57 ./usr/include/libGenome/gnRAWSource.h
-rw-r--r-- root/root 3968 2023-07-18 12:57 ./usr/include/libGenome/gnRNASequence.h
-rw-r--r-- root/root 4121 2023-07-18 12:57 ./usr/include/libGenome/gnSEQSource.h
-rw-r--r-- root/root 24872 2023-07-18 12:57 ./usr/include/libGenome/gnSequence.h
-rw-r--r-- root/root 2094 2023-07-18 12:57 ./usr/include/libGenome/gnSetup.h
-rw-r--r-- root/root 7602 2023-07-18 12:57 ./usr/include/libGenome/gnSourceFactory.h
-rw-r--r-- root/root 3744 2023-07-18 12:57 ./usr/include/libGenome/gnSourceHeader.h
-rw-r--r-- root/root 3762 2023-07-18 12:57 ./usr/include/libGenome/gnSourceQualifier.h
-rw-r--r-- root/root 3003 2023-07-18 12:57 ./usr/include/libGenome/gnSourceSpec.h
-rw-r--r-- root/root 2760 2023-07-18 12:57 ./usr/include/libGenome/gnStringHeader.h
-rw-r--r-- root/root 2945 2023-07-18 12:57 ./usr/include/libGenome/gnStringQualifier.h
-rw-r--r-- root/root 2949 2023-07-18 12:57 ./usr/include/libGenome/gnStringSpec.h
-rw-r--r-- root/root 2152 2023-07-18 12:57 ./usr/include/libGenome/gnStringTools.h
-rw-r--r-- root/root 5438 2023-07-18 12:57 ./usr/include/libGenome/gnTranslator.h
-rw-r--r-- root/root 1067 2023-07-18 12:57 ./usr/include/libGenome/gnVersion.h
drwxr-xr-x root/root 0 2023-07-18 12:57 ./usr/lib/
drwxr-xr-x root/root 0 2023-07-18 12:57 ./usr/lib/arm-linux-gnueabihf/
-rw-r--r-- root/root 811926 2023-07-18 12:57 ./usr/lib/arm-linux-gnueabihf/libGenome.a
lrwxrwxrwx root/root 0 2023-07-18 12:57 ./usr/lib/arm-linux-gnueabihf/libGenome.so -> libGenome.so.0.1.3
drwxr-xr-x root/root 0 2023-07-18 12:57 ./usr/lib/arm-linux-gnueabihf/pkgconfig/
-rw-r--r-- root/root 278 2023-07-18 12:57 ./usr/lib/arm-linux-gnueabihf/pkgconfig/libGenome.pc
drwxr-xr-x root/root 0 2023-07-18 12:57 ./usr/share/
drwxr-xr-x root/root 0 2023-07-18 12:57 ./usr/share/doc/
drwxr-xr-x root/root 0 2023-07-18 12:57 ./usr/share/doc/libgenome-dev/
-rw-r--r-- root/root 472 2023-07-18 12:57 ./usr/share/doc/libgenome-dev/README.Debian
-rw-r--r-- root/root 850 2023-07-18 12:57 ./usr/share/doc/libgenome-dev/changelog.Debian.gz
-rw-r--r-- root/root 516 2005-03-27 01:48 ./usr/share/doc/libgenome-dev/changelog.gz
-rw-r--r-- root/root 965 2023-07-18 12:57 ./usr/share/doc/libgenome-dev/copyright
libgenome0-dbgsym_1.3.11+svn20110227.4616-6_armhf.deb
-----------------------------------------------------
new Debian package, version 2.0.
size 1684784 bytes: control archive=568 bytes.
435 bytes, 13 lines control
106 bytes, 1 lines md5sums
Package: libgenome0-dbgsym
Source: libgenome
Version: 1.3.11+svn20110227.4616-6
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1750
Depends: libgenome0 (= 1.3.11+svn20110227.4616-6)
Section: debug
Priority: optional
Multi-Arch: same
Description: debug symbols for libgenome0
Build-Ids: a21ff95d2aa9cd84c9147f996650f282f2abf7c0
drwxr-xr-x root/root 0 2023-07-18 12:57 ./
drwxr-xr-x root/root 0 2023-07-18 12:57 ./usr/
drwxr-xr-x root/root 0 2023-07-18 12:57 ./usr/lib/
drwxr-xr-x root/root 0 2023-07-18 12:57 ./usr/lib/debug/
drwxr-xr-x root/root 0 2023-07-18 12:57 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2023-07-18 12:57 ./usr/lib/debug/.build-id/a2/
-rw-r--r-- root/root 1780984 2023-07-18 12:57 ./usr/lib/debug/.build-id/a2/1ff95d2aa9cd84c9147f996650f282f2abf7c0.debug
drwxr-xr-x root/root 0 2023-07-18 12:57 ./usr/share/
drwxr-xr-x root/root 0 2023-07-18 12:57 ./usr/share/doc/
lrwxrwxrwx root/root 0 2023-07-18 12:57 ./usr/share/doc/libgenome0-dbgsym -> libgenome0
libgenome0_1.3.11+svn20110227.4616-6_armhf.deb
----------------------------------------------
new Debian package, version 2.0.
size 99892 bytes: control archive=1096 bytes.
1004 bytes, 26 lines control
301 bytes, 4 lines md5sums
52 bytes, 1 lines shlibs
68 bytes, 2 lines triggers
Package: libgenome0
Source: libgenome
Version: 1.3.11+svn20110227.4616-6
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 340
Depends: libc6 (>= 2.4), libgcc-s1 (>= 3.5), libstdc++6 (>= 11)
Provides: libgenome-1.3-0v5
Section: libs
Priority: optional
Multi-Arch: same
Homepage: https://sourceforge.net/projects/libgenome/
Description: toolkit for developing bioinformatic related software
libGenome is a freely available toolkit for developing bioinformatic related
software in C++. It is intended to take the hassle out of performing common
tasks on genetic sequence and annotation data.
.
Among other things, libGenome can help you:
.
* Read and write Multi-FastA format files
* Read and write GenBank flat file database entries
* Append, chop, truncate, reverse, complement, translate, and otherwise
mangle sequence data
* Access annotation in GenBank flat files
.
This package contains the dynamic library.
drwxr-xr-x root/root 0 2023-07-18 12:57 ./
drwxr-xr-x root/root 0 2023-07-18 12:57 ./usr/
drwxr-xr-x root/root 0 2023-07-18 12:57 ./usr/lib/
drwxr-xr-x root/root 0 2023-07-18 12:57 ./usr/lib/arm-linux-gnueabihf/
lrwxrwxrwx root/root 0 2023-07-18 12:57 ./usr/lib/arm-linux-gnueabihf/libGenome.so.0 -> libGenome.so.0.1.3
-rw-r--r-- root/root 333216 2023-07-18 12:57 ./usr/lib/arm-linux-gnueabihf/libGenome.so.0.1.3
drwxr-xr-x root/root 0 2023-07-18 12:57 ./usr/share/
drwxr-xr-x root/root 0 2023-07-18 12:57 ./usr/share/doc/
drwxr-xr-x root/root 0 2023-07-18 12:57 ./usr/share/doc/libgenome0/
-rw-r--r-- root/root 851 2023-07-18 12:57 ./usr/share/doc/libgenome0/changelog.Debian.gz
-rw-r--r-- root/root 516 2005-03-27 01:48 ./usr/share/doc/libgenome0/changelog.gz
-rw-r--r-- root/root 965 2023-07-18 12:57 ./usr/share/doc/libgenome0/copyright
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 47832
Build-Time: 146
Distribution: trixie-staging
Host Architecture: armhf
Install-Time: 137
Job: libgenome_1.3.11+svn20110227.4616-6
Machine Architecture: armhf
Package: libgenome
Package-Time: 308
Source-Version: 1.3.11+svn20110227.4616-6
Space: 47832
Status: successful
Version: 1.3.11+svn20110227.4616-6
--------------------------------------------------------------------------------
Finished at 2023-09-16T04:31:03Z
Build needed 00:05:08, 47832k disk space