libgenome →
1.3.11+svn20110227.4616-3 →
armhf → 2020-07-28 05:51:37
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testbuildd
+==============================================================================+
| libgenome 1.3.11+svn20110227.4616-3 (armhf) Tue, 28 Jul 2020 05:42:00 +0000 |
+==============================================================================+
Package: libgenome
Version: 1.3.11+svn20110227.4616-3
Source Version: 1.3.11+svn20110227.4616-3
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-27eacbbb-8f91-401e-b330-371825b0734c' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.8 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.9 MB]
Fetched 24.7 MB in 27s (908 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'libgenome' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/libgenome.git
Please use:
git clone https://salsa.debian.org/med-team/libgenome.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 93.8 kB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main libgenome 1.3.11+svn20110227.4616-3 (dsc) [2162 B]
Get:2 http://172.17.0.1/private bullseye-staging/main libgenome 1.3.11+svn20110227.4616-3 (tar) [81.1 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main libgenome 1.3.11+svn20110227.4616-3 (diff) [10.5 kB]
Fetched 93.8 kB in 0s (560 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/libgenome-L8FJXe/libgenome-1.3.11+svn20110227.4616' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/libgenome-L8FJXe' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-eIB3Kf/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-eIB3Kf/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-eIB3Kf/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-eIB3Kf/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-eIB3Kf/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-eIB3Kf/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-eIB3Kf/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-eIB3Kf/apt_archive ./ Packages [431 B]
Fetched 2107 B in 1s (2853 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
bsdextrautils dmsetup libargon2-1 libcryptsetup12 libdevmapper1.02.1
libjson-c4 libssl1.1 netbase
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 9 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-eIB3Kf/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
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Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12314 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), d-shlibs (>= 0.61)
Filtered Build-Depends: debhelper-compat (= 13), d-shlibs (>= 0.61)
dpkg-deb: building package 'sbuild-build-depends-libgenome-dummy' in '/<<BUILDDIR>>/resolver-eIB3Kf/apt_archive/sbuild-build-depends-libgenome-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-libgenome-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-eIB3Kf/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-eIB3Kf/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-eIB3Kf/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-eIB3Kf/apt_archive ./ Sources [507 B]
Get:5 copy:/<<BUILDDIR>>/resolver-eIB3Kf/apt_archive ./ Packages [586 B]
Fetched 2426 B in 1s (3258 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install libgenome build dependencies (apt-based resolver)
---------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
dmsetup libargon2-1 libcryptsetup12 libdevmapper1.02.1 libjson-c4 libssl1.1
netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev d-shlibs debhelper dh-autoreconf
dh-strip-nondeterminism dwz file gettext gettext-base groff-base
intltool-debian libarchive-zip-perl libcroco3 libdebhelper-perl libelf1
libfile-stripnondeterminism-perl libglib2.0-0 libicu67 libmagic-mgc
libmagic1 libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0
libxml2 m4 man-db po-debconf sensible-utils
Suggested packages:
autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc
libasprintf-dev libgettextpo-dev groff libtool-doc gfortran
| fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
libmail-box-perl
Recommended packages:
curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
xdg-user-dirs libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev d-shlibs debhelper dh-autoreconf
dh-strip-nondeterminism dwz file gettext gettext-base groff-base
intltool-debian libarchive-zip-perl libcroco3 libdebhelper-perl libelf1
libfile-stripnondeterminism-perl libglib2.0-0 libicu67 libmagic-mgc
libmagic1 libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0
libxml2 m4 man-db po-debconf sbuild-build-depends-libgenome-dummy
sensible-utils
0 upgraded, 34 newly installed, 0 to remove and 9 not upgraded.
Need to get 18.5 MB of archives.
After this operation, 68.1 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-eIB3Kf/apt_archive ./ sbuild-build-depends-libgenome-dummy 0.invalid.0 [872 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-5 [783 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.2-2 [29.6 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.3-2 [1269 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf sensible-utils all 0.0.12+nmu1 [16.0 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.38-5 [262 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.38-5 [113 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.38-5 [67.0 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11.1 [341 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.2-3 [801 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf d-shlibs all 0.93 [17.7 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-14 [513 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 13.2 [187 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.9.0-1 [25.5 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.9.0-1 [15.2 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.176-1.1 [158 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-5 [142 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.64.4-1 [1159 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf libicu67 armhf 67.1-3 [8287 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.10+dfsg-5+b1 [593 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-10 [1219 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 13.2 [1007 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Setting up gettext-base (0.19.8.1-10) ...
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Setting up autotools-dev (20180224.1) ...
Setting up libsigsegv2:armhf (2.12-2) ...
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Setting up libuchardet0:armhf (0.0.7-1) ...
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Setting up libelf1:armhf (0.176-1.1) ...
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Setting up libtool (2.4.6-14) ...
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Setting up autoconf (2.69-11.1) ...
Setting up dh-strip-nondeterminism (1.9.0-1) ...
Setting up dwz (0.13-5) ...
Setting up groff-base (1.22.4-5) ...
Setting up automake (1:1.16.2-3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up gettext (0.19.8.1-10) ...
Setting up man-db (2.9.3-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up po-debconf (1.0.21) ...
Setting up debhelper (13.2) ...
Setting up sbuild-build-depends-libgenome-dummy (0.invalid.0) ...
Setting up dh-autoreconf (19) ...
Processing triggers for libc-bin (2.31-1+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.6-armmp armhf (armv7l)
Toolchain package versions: binutils_2.34.90.20200706-1+rpi1 dpkg-dev_1.19.7 g++-9_9.3.0-14+rpi1 gcc-9_9.3.0-14+rpi1 libc6-dev_2.31-1+rpi1 libstdc++-9-dev_9.3.0-14+rpi1 libstdc++6_10.1.0-4+rpi1 linux-libc-dev_5.7.6-1+rpi1
Package versions: adduser_3.118 apt_2.1.7 autoconf_2.69-11.1 automake_1:1.16.2-3 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.47 bash_5.0-6 binutils_2.34.90.20200706-1+rpi1 binutils-arm-linux-gnueabihf_2.34.90.20200706-1+rpi1 binutils-common_2.34.90.20200706-1+rpi1 bsdextrautils_2.35.2-7 bsdutils_1:2.35.2-7 build-essential_12.8 bzip2_1.0.8-3 coreutils_8.30-3 cpp_4:9.2.1-3.1+rpi1 cpp-9_9.3.0-14+rpi1 d-shlibs_0.93 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13.2 debianutils_4.9.1 dh-autoreconf_19 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3 dirmngr_2.2.20-1 dmsetup_2:1.02.167-1+b2 dpkg_1.19.7 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.24-1 file_1:5.38-5 findutils_4.7.0-1 g++_4:9.2.1-3.1+rpi1 g++-9_9.3.0-14+rpi1 gcc_4:9.2.1-3.1+rpi1 gcc-10-base_10.1.0-4+rpi1 gcc-6-base_6.5.0-1+rpi3 gcc-7-base_7.5.0-6+rpi1 gcc-8-base_8.4.0-4+rpi1 gcc-9_9.3.0-14+rpi1 gcc-9-base_9.3.0-14+rpi1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gnupg_2.2.20-1 gnupg-l10n_2.2.20-1 gnupg-utils_2.2.20-1 gpg_2.2.20-1 gpg-agent_2.2.20-1 gpg-wks-client_2.2.20-1 gpg-wks-server_2.2.20-1 gpgconf_2.2.20-1 gpgsm_2.2.20-1 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2 hostname_3.23 init-system-helpers_1.58 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libapt-pkg6.0_2.1.7 libarchive-zip-perl_1.68-1 libargon2-1_0~20171227-0.2 libasan5_9.3.0-14+rpi1 libassuan0_2.5.3-7.1 libatomic1_10.1.0-4+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3 libaudit1_1:2.8.5-3 libbinutils_2.34.90.20200706-1+rpi1 libblkid1_2.35.2-7 libbz2-1.0_1.0.8-3 libc-bin_2.31-1+rpi1 libc-dev-bin_2.31-1+rpi1 libc6_2.31-1+rpi1 libc6-dev_2.31-1+rpi1 libcap-ng0_0.7.9-2.2 libcc1-0_10.1.0-4+rpi1 libcom-err2_1.45.6-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.16-1 libcrypt1_1:4.4.16-1 libcryptsetup12_2:2.3.3-1 libctf-nobfd0_2.34.90.20200706-1+rpi1 libctf0_2.34.90.20200706-1+rpi1 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.253 libdebhelper-perl_13.2 libdevmapper1.02.1_2:1.02.167-1+b2 libdpkg-perl_1.19.7 libelf1_0.176-1.1 libext2fs2_1.45.6-1 libfakeroot_1.24-1 libffi7_3.3-4 libfile-stripnondeterminism-perl_1.9.0-1 libgcc-9-dev_9.3.0-14+rpi1 libgcc-s1_10.1.0-4+rpi1 libgcrypt20_1.8.6-2 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libglib2.0-0_2.64.4-1 libgmp10_2:6.2.0+dfsg-6 libgnutls30_3.6.14-2+b1 libgomp1_10.1.0-4+rpi1 libgpg-error0_1.38-2 libhogweed6_3.6-2 libicu67_67.1-3 libidn2-0_2.3.0-1 libisl22_0.22.1-1 libjson-c4_0.13.1+dfsg-9 libksba8_1.4.0-2 libldap-2.4-2_2.4.50+dfsg-1+b1 libldap-common_2.4.50+dfsg-1 liblocale-gettext-perl_1.07-4 liblz4-1_1.9.2-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.35.2-7 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libncursesw6_6.2-1 libnettle8_3.6-2 libnpth0_1.6-2 libp11-kit0_0.23.20-1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-13 libperl5.30_5.30.3-4 libpipeline1_1.5.2-2 libreadline8_8.0-4 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.3-1+rpi1 libselinux1_3.1-2 libsemanage-common_3.1-1 libsemanage1_3.1-1 libsepol1_3.1-1 libsigsegv2_2.12-2 libsmartcols1_2.35.2-7 libsqlite3-0_3.32.3-1 libss2_1.45.6-1 libssl1.1_1.1.1g-1 libstdc++-9-dev_9.3.0-14+rpi1 libstdc++6_10.1.0-4+rpi1 libsub-override-perl_0.09-2 libsystemd0_245.6-2+rpi1+b1 libtasn1-6_4.16.0-2 libtext-charwidth-perl_0.04-10 libtext-iconv-perl_1.7-7 libtinfo6_6.2-1 libtool_2.4.6-14 libubsan1_10.1.0-4+rpi1 libuchardet0_0.0.7-1 libudev1_245.6-2+rpi1+b1 libunistring2_0.9.10-4 libuuid1_2.35.2-7 libxml2_2.9.10+dfsg-5+b1 libzstd1_1.4.5+dfsg-3+rpi1 linux-libc-dev_5.7.6-1+rpi1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0+rpi1 m4_1.4.18-4 make_4.2.1-2 man-db_2.9.3-2 mawk_1.3.4.20200120-2 mount_2.35.2-7 ncurses-base_6.2-1 ncurses-bin_6.2-1 netbase_6.1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.3-4 perl-base_5.30.3-4 perl-modules-5.30_5.30.3-4 pinentry-curses_1.1.0-4 po-debconf_1.0.21 raspbian-archive-keyring_20120528.2 readline-common_8.0-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-libgenome-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-3 tar_1.30+dfsg-7 tzdata_2020a-1 util-linux_2.35.2-7 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Thu Jul 23 13:07:31 2020 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./libgenome_1.3.11+svn20110227.4616-3.dsc
dpkg-source: info: extracting libgenome in /<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616
dpkg-source: info: unpacking libgenome_1.3.11+svn20110227.4616.orig.tar.xz
dpkg-source: info: unpacking libgenome_1.3.11+svn20110227.4616-3.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying gcc-6.1.patch
dpkg-source: info: applying drop-version-number.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-27eacbbb-8f91-401e-b330-371825b0734c
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package libgenome
dpkg-buildpackage: info: source version 1.3.11+svn20110227.4616-3
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean
dh_clean
debian/rules binary-arch
dh binary-arch
dh_update_autotools_config -a
dh_autoreconf -a
libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'config'.
libtoolize: copying file 'config/ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
configure.ac:61: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. For more info, see:
configure.ac:61: https://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation
configure.ac:68: installing 'config/compile'
configure.ac:8: installing 'config/config.guess'
configure.ac:8: installing 'config/config.sub'
configure.ac:61: installing 'config/install-sh'
configure.ac:61: installing 'config/missing'
Makefile.am: installing './INSTALL'
Makefile.am: installing './COPYING' using GNU General Public License v3 file
Makefile.am: Consider adding the COPYING file to the version control system
Makefile.am: for your code, to avoid questions about which license your project uses
libGenome/Makefile.am:44: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
libGenome/Makefile.am: installing 'config/depcomp'
dh_auto_configure -a
./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking
checking build system type... arm-unknown-linux-gnueabihf
checking host system type... arm-unknown-linux-gnueabihf
checking target system type... arm-unknown-linux-gnueabihf
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking whether make supports the include directive... yes (GNU style)
checking dependency style of gcc... none
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking dependency style of g++... none
checking how to print strings... printf
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop
checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... no
checking if : is a manifest tool... no
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking how to run the C++ preprocessor... g++ -E
checking for ld used by g++... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking for g++ option to produce PIC... -fPIC -DPIC
checking if g++ PIC flag -fPIC -DPIC works... yes
checking if g++ static flag -static works... yes
checking if g++ supports -c -o file.o... yes
checking if g++ supports -c -o file.o... (cached) yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether ln -s works... yes
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... 64
checking for ANSI C header files... (cached) yes
checking for doxygen... no
configure: WARNING: doxygen not found - will not generate any doxygen documentation
checking for perl... /usr/bin/perl
checking for an ANSI C-conforming const... yes
checking for inline... inline
checking whether time.h and sys/time.h may both be included... yes
checking whether gcc needs -traditional... no
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating libGenome/Makefile
config.status: creating libGenome.pc
config.status: creating config.h
config.status: executing depfiles commands
config.status: executing libtool commands
dh_auto_build -a
make -j4
make[1]: Entering directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
make all-recursive
make[2]: Entering directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
Making all in libGenome
make[3]: Entering directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/libGenome'
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnFilter.lo gnFilter.cpp
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnCompare.lo gnCompare.cpp
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnTranslator.lo gnTranslator.cpp
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnSourceFactory.lo gnSourceFactory.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnFilter.cpp -fPIC -DPIC -o .libs/gnFilter.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnSourceFactory.cpp -fPIC -DPIC -o .libs/gnSourceFactory.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnTranslator.cpp -fPIC -DPIC -o .libs/gnTranslator.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnCompare.cpp -fPIC -DPIC -o .libs/gnCompare.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnFilter.cpp -o gnFilter.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnCompare.cpp -o gnCompare.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnFeature.lo gnFeature.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnFeature.cpp -fPIC -DPIC -o .libs/gnFeature.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnSourceFactory.cpp -o gnSourceFactory.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnSourceQualifier.lo gnSourceQualifier.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnSourceQualifier.cpp -fPIC -DPIC -o .libs/gnSourceQualifier.o
In file included from /usr/include/c++/9/vector:72,
from ../libGenome/gnFeature.h:22,
from gnFeature.cpp:16:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const genome::gnLocation&}; _Tp = genome::gnLocation; _Alloc = std::allocator<genome::gnLocation>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<genome::gnLocation>::iterator' {aka '__gnu_cxx::__normal_iterator<genome::gnLocation*, std::vector<genome::gnLocation> >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
from ../libGenome/gnFeature.h:22,
from gnFeature.cpp:16:
/usr/include/c++/9/bits/stl_vector.h: In copy constructor 'genome::gnFeature::gnFeature(const genome::gnFeature&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<genome::gnLocation*, std::vector<genome::gnLocation> >' changed in GCC 7.1
1195 | _M_realloc_insert(end(), __x);
| ^~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnSourceQualifier.cpp -o gnSourceQualifier.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnFeature.cpp -o gnFeature.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnFileContig.lo gnFileContig.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnFileContig.cpp -fPIC -DPIC -o .libs/gnFileContig.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnFileContig.cpp -o gnFileContig.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnSourceSpec.lo gnSourceSpec.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnSourceSpec.cpp -fPIC -DPIC -o .libs/gnSourceSpec.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnFileSource.lo gnFileSource.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnFileSource.cpp -fPIC -DPIC -o .libs/gnFileSource.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnFASSource.lo gnFASSource.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnFASSource.cpp -fPIC -DPIC -o .libs/gnFASSource.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnTranslator.cpp -o gnTranslator.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnSourceSpec.cpp -o gnSourceSpec.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnFileSource.cpp -o gnFileSource.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnFragmentSpec.lo gnFragmentSpec.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnFragmentSpec.cpp -fPIC -DPIC -o .libs/gnFragmentSpec.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnStringSpec.lo gnStringSpec.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnStringSpec.cpp -fPIC -DPIC -o .libs/gnStringSpec.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnStringSpec.cpp -o gnStringSpec.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnFASSource.cpp -o gnFASSource.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnFragmentSpec.cpp -o gnFragmentSpec.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnGBKSource.lo gnGBKSource.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnGBKSource.cpp -fPIC -DPIC -o .libs/gnGBKSource.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnStringTools.lo gnStringTools.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnStringTools.cpp -fPIC -DPIC -o .libs/gnStringTools.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnGenomeSpec.lo gnGenomeSpec.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnGenomeSpec.cpp -fPIC -DPIC -o .libs/gnGenomeSpec.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnLocation.lo gnLocation.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnLocation.cpp -fPIC -DPIC -o .libs/gnLocation.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnStringTools.cpp -o gnStringTools.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnLocation.cpp -o gnLocation.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnRAWSource.lo gnRAWSource.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnRAWSource.cpp -fPIC -DPIC -o .libs/gnRAWSource.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnBaseFeature.lo gnBaseFeature.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnBaseFeature.cpp -fPIC -DPIC -o .libs/gnBaseFeature.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnGenomeSpec.cpp -o gnGenomeSpec.o >/dev/null 2>&1
In file included from /usr/include/c++/9/vector:72,
from ../libGenome/gnBaseFeature.h:21,
from gnBaseFeature.cpp:16:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const genome::gnLocation&}; _Tp = genome::gnLocation; _Alloc = std::allocator<genome::gnLocation>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<genome::gnLocation>::iterator' {aka '__gnu_cxx::__normal_iterator<genome::gnLocation*, std::vector<genome::gnLocation> >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnGBKSource.cpp -o gnGBKSource.o >/dev/null 2>&1
/usr/include/c++/9/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(std::vector<_Tp, _Alloc>::const_iterator, const value_type&) [with _Tp = genome::gnLocation; _Alloc = std::allocator<genome::gnLocation>]':
/usr/include/c++/9/bits/vector.tcc:130:5: note: parameter passing for argument of type 'std::vector<genome::gnLocation>::const_iterator' {aka '__gnu_cxx::__normal_iterator<const genome::gnLocation*, std::vector<genome::gnLocation> >'} changed in GCC 7.1
130 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:161:2: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<genome::gnLocation*, std::vector<genome::gnLocation> >' changed in GCC 7.1
161 | _M_realloc_insert(begin() + (__position - cbegin()), __x);
| ^~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnRAWSource.cpp -o gnRAWSource.o >/dev/null 2>&1
gnBaseFeature.cpp: In member function 'virtual boolean genome::gnBaseFeature::AddLocation(const genome::gnLocation&, uint32)':
gnBaseFeature.cpp:197:58: note: parameter passing for argument of type 'std::vector<genome::gnLocation>::const_iterator' {aka '__gnu_cxx::__normal_iterator<const genome::gnLocation*, std::vector<genome::gnLocation> >'} changed in GCC 7.1
197 | m_locationList.insert(m_locationList.begin() + listI, l);
| ^
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnBaseFeature.cpp -o gnBaseFeature.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnSEQSource.lo gnSEQSource.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnSEQSource.cpp -fPIC -DPIC -o .libs/gnSEQSource.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnSequence.lo gnSequence.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnSequence.cpp -fPIC -DPIC -o .libs/gnSequence.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnContigSpec.lo gnContigSpec.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnContigSpec.cpp -fPIC -DPIC -o .libs/gnContigSpec.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnContigSpec.cpp -o gnContigSpec.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnSourceHeader.lo gnSourceHeader.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnSourceHeader.cpp -fPIC -DPIC -o .libs/gnSourceHeader.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnSequence.cpp -o gnSequence.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnSourceHeader.cpp -o gnSourceHeader.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnSEQSource.cpp -o gnSEQSource.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnException.lo gnException.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnException.cpp -fPIC -DPIC -o .libs/gnException.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnFastTranslator.lo gnFastTranslator.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnFastTranslator.cpp -fPIC -DPIC -o .libs/gnFastTranslator.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnException.cpp -o gnException.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnPosSpecificTranslator.lo gnPosSpecificTranslator.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnPosSpecificTranslator.cpp -fPIC -DPIC -o .libs/gnPosSpecificTranslator.o
In file included from /usr/include/c++/9/vector:72,
from ../libGenome/gnFastTranslator.h:23,
from gnFastTranslator.cpp:16:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gnDefs.lo gnDefs.cpp
/usr/include/c++/9/bits/vector.tcc: In member function 'virtual void genome::gnFastTranslator::CacheTranslator(const genome::gnTranslator*, std::string, gnSeqI)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ^~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnDefs.cpp -fPIC -DPIC -o .libs/gnDefs.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnDefs.cpp -o gnDefs.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnFastTranslator.cpp -o gnFastTranslator.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -c gnPosSpecificTranslator.cpp -o gnPosSpecificTranslator.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 1:3:1 -Wl,-z,relro -Wl,-z,now -o libGenome.la -rpath /usr/lib/arm-linux-gnueabihf gnFilter.lo gnCompare.lo gnTranslator.lo gnSourceFactory.lo gnFeature.lo gnSourceQualifier.lo gnFileContig.lo gnSourceSpec.lo gnFileSource.lo gnFASSource.lo gnFragmentSpec.lo gnStringSpec.lo gnGBKSource.lo gnStringTools.lo gnGenomeSpec.lo gnLocation.lo gnRAWSource.lo gnBaseFeature.lo gnSEQSource.lo gnSequence.lo gnContigSpec.lo gnSourceHeader.lo gnException.lo gnFastTranslator.lo gnPosSpecificTranslator.lo gnDefs.lo
libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/9/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/9/crtbeginS.o .libs/gnFilter.o .libs/gnCompare.o .libs/gnTranslator.o .libs/gnSourceFactory.o .libs/gnFeature.o .libs/gnSourceQualifier.o .libs/gnFileContig.o .libs/gnSourceSpec.o .libs/gnFileSource.o .libs/gnFASSource.o .libs/gnFragmentSpec.o .libs/gnStringSpec.o .libs/gnGBKSource.o .libs/gnStringTools.o .libs/gnGenomeSpec.o .libs/gnLocation.o .libs/gnRAWSource.o .libs/gnBaseFeature.o .libs/gnSEQSource.o .libs/gnSequence.o .libs/gnContigSpec.o .libs/gnSourceHeader.o .libs/gnException.o .libs/gnFastTranslator.o .libs/gnPosSpecificTranslator.o .libs/gnDefs.o -L/usr/lib/gcc/arm-linux-gnueabihf/9 -L/usr/lib/gcc/arm-linux-gnueabihf/9/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/9/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/9/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/9/../../../arm-linux-gnueabihf/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libGenome.so.0 -o .libs/libGenome.so.0.1.3
libtool: link: (cd ".libs" && rm -f "libGenome.so.0" && ln -s "libGenome.so.0.1.3" "libGenome.so.0")
libtool: link: (cd ".libs" && rm -f "libGenome.so" && ln -s "libGenome.so.0.1.3" "libGenome.so")
libtool: link: ar cr .libs/libGenome.a gnFilter.o gnCompare.o gnTranslator.o gnSourceFactory.o gnFeature.o gnSourceQualifier.o gnFileContig.o gnSourceSpec.o gnFileSource.o gnFASSource.o gnFragmentSpec.o gnStringSpec.o gnGBKSource.o gnStringTools.o gnGenomeSpec.o gnLocation.o gnRAWSource.o gnBaseFeature.o gnSEQSource.o gnSequence.o gnContigSpec.o gnSourceHeader.o gnException.o gnFastTranslator.o gnPosSpecificTranslator.o gnDefs.o
libtool: link: ranlib .libs/libGenome.a
libtool: link: ( cd ".libs" && rm -f "libGenome.la" && ln -s "../libGenome.la" "libGenome.la" )
make[3]: Leaving directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/libGenome'
make[3]: Entering directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
make[3]: Leaving directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
make[2]: Leaving directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
make[1]: Leaving directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
debian/rules override_dh_auto_test
make[1]: Entering directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
echo 'Disable test since some header (gnDNXSource.h) seems to be missing.'
Disable test since some header (gnDNXSource.h) seems to be missing.
make[1]: Leaving directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
create-stamp debian/debhelper-build-stamp
dh_testroot -a
dh_prep -a
dh_auto_install -a
make -j1 install DESTDIR=/<<BUILDDIR>>/libgenome-1.3.11\+svn20110227.4616/debian/tmp AM_UPDATE_INFO_DIR=no
make[1]: Entering directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
Making install in libGenome
make[2]: Entering directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/libGenome'
make[3]: Entering directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/libGenome'
/bin/mkdir -p '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/lib/arm-linux-gnueabihf'
/bin/bash ../libtool --mode=install /usr/bin/install -c libGenome.la '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/libGenome.so.0.1.3 /<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/lib/arm-linux-gnueabihf/libGenome.so.0.1.3
libtool: install: (cd /<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libGenome.so.0.1.3 libGenome.so.0 || { rm -f libGenome.so.0 && ln -s libGenome.so.0.1.3 libGenome.so.0; }; })
libtool: install: (cd /<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libGenome.so.0.1.3 libGenome.so || { rm -f libGenome.so && ln -s libGenome.so.0.1.3 libGenome.so; }; })
libtool: install: /usr/bin/install -c .libs/libGenome.lai /<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/lib/arm-linux-gnueabihf/libGenome.la
libtool: install: /usr/bin/install -c .libs/libGenome.a /<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/lib/arm-linux-gnueabihf/libGenome.a
libtool: install: chmod 644 /<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/lib/arm-linux-gnueabihf/libGenome.a
libtool: install: ranlib /<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/lib/arm-linux-gnueabihf/libGenome.a
libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf'
/bin/mkdir -p '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/include/libGenome'
/usr/bin/install -c -m 644 gnABISource.h gnDataBaseSource.h gnLocation.h gnSetup.h gnBaseFeature.h gnDebug.h gnMultiSpec.h gnSourceFactory.h gnBaseFilter.h gnDefs.h gnSourceHeader.h gnPosSpecificTranslator.h gnBaseHeader.h gnFASSource.h gnSourceQualifier.h gnBaseQualifier.h gnSourceSpec.h gnStringQualifier.h gnBaseSource.h gnFeature.h gnProteinSequence.h gnStringHeader.h gnBaseSpec.h gnFileContig.h gnRAWSource.h gnClone.h gnFileSource.h gnRNASequence.h gnStringSpec.h gnCompare.h gnFilter.h gnSEQSource.h gnStringTools.h gnContigSpec.h gnFragmentSpec.h gnTranslator.h gnDNASequence.h gnGBKSource.h gnVersion.h gnFastTranslator.h '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/include/libGenome'
/usr/bin/install -c -m 644 gnGenomeSpec.h gnSequence.h gnException.h gnExceptionCode.h IntervalSequenceTree.h OmpGuard.h '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/include/libGenome'
make[3]: Leaving directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/libGenome'
make[2]: Leaving directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/libGenome'
make[2]: Entering directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
make[3]: Entering directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
make[3]: Nothing to be done for 'install-exec-am'.
/bin/mkdir -p '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig'
/usr/bin/install -c -m 644 libGenome.pc '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig'
make[3]: Leaving directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
make[2]: Leaving directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
make[1]: Leaving directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
debian/rules override_dh_install
make[1]: Entering directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
dh_install
# Call d-shlibmove to comply with library packaging guide
# mv debian/tmp/usr/include/*/* debian/tmp/usr/include/
d-shlibmove --commit \
--multiarch \
--devunversioned \
--exclude-la \
--movedev debian/tmp/usr/include/* usr/include \
--movedev "debian/tmp/usr/lib/*/pkgconfig/*.pc" usr/lib/arm-linux-gnueabihf/pkgconfig \
debian/tmp/usr/lib/*/*.so
Library package automatic movement utility
set -e
install -d -m 755 debian/libgenome-dev/usr/lib/arm-linux-gnueabihf
install -d -m 755 debian/libgenome0/usr/lib/arm-linux-gnueabihf
mv debian/tmp/usr/lib/arm-linux-gnueabihf/libGenome.a debian/libgenome-dev/usr/lib/arm-linux-gnueabihf
mv debian/tmp/usr/lib/arm-linux-gnueabihf/libGenome.so debian/libgenome-dev/usr/lib/arm-linux-gnueabihf
mv /<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/lib/arm-linux-gnueabihf/libGenome.so.0 debian/libgenome0/usr/lib/arm-linux-gnueabihf
mv /<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616/debian/tmp/usr/lib/arm-linux-gnueabihf/libGenome.so.0.1.3 debian/libgenome0/usr/lib/arm-linux-gnueabihf
PKGDEV=libgenome-dev
PKGSHL=libgenome0
install -d -m 755 debian/libgenome-dev/usr/include
mv debian/tmp/usr/include/libGenome debian/libgenome-dev/usr/include
install -d -m 755 debian/libgenome-dev/usr/lib/arm-linux-gnueabihf/pkgconfig
mv debian/tmp/usr/lib/*/pkgconfig/*.pc debian/libgenome-dev/usr/lib/arm-linux-gnueabihf/pkgconfig
find debian -name libGenome.la -delete
make[1]: Leaving directory '/<<BUILDDIR>>/libgenome-1.3.11+svn20110227.4616'
dh_installdocs -a
dh_installchangelogs -a
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
dh_compress -a
dh_fixperms -a
dh_missing -a
dh_dwz -a -a
dh_strip -a -a
dh_makeshlibs -a -a
dh_shlibdeps -a -a
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libgenome0/usr/lib/arm-linux-gnueabihf/libGenome.so.0.1.3 found in none of the libraries
dh_installdeb -a
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'libgenome-dev' in '../libgenome-dev_1.3.11+svn20110227.4616-3_armhf.deb'.
dpkg-deb: building package 'libgenome0' in '../libgenome0_1.3.11+svn20110227.4616-3_armhf.deb'.
dpkg-deb: building package 'libgenome0-dbgsym' in '../libgenome0-dbgsym_1.3.11+svn20110227.4616-3_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../libgenome_1.3.11+svn20110227.4616-3_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2020-07-28T05:51:23Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
libgenome_1.3.11+svn20110227.4616-3_armhf.changes:
--------------------------------------------------
Format: 1.8
Date: Thu, 23 Jul 2020 14:59:20 +0200
Source: libgenome
Binary: libgenome-dev libgenome0 libgenome0-dbgsym
Architecture: armhf
Version: 1.3.11+svn20110227.4616-3
Distribution: bullseye-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
libgenome-dev - toolkit for developing bioinformatic related software (devel)
libgenome0 - toolkit for developing bioinformatic related software
Closes: 957442
Changes:
libgenome (1.3.11+svn20110227.4616-3) unstable; urgency=medium
.
* Standards-Version: 4.5.0 (routine-update)
* debhelper-compat 13 (routine-update)
* Respect DEB_BUILD_OPTIONS in override_dh_auto_test target (routine-
update)
* Remove trailing whitespace in debian/control (routine-update)
* Add salsa-ci file (routine-update)
* Rules-Requires-Root: no (routine-update)
* Trim trailing whitespace.
* debian/copyright: use spaces rather than tabs to start continuation lines.
* Remove libGenome.la from build to make dh_missing happy
* Update symbols for gcc-10
Closes: #957442
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Checksums-Sha256:
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Files:
570cd4e01d92eb960944f3cdbf527634 169504 libdevel optional libgenome-dev_1.3.11+svn20110227.4616-3_armhf.deb
0d7aae804888007e00d41a6875551f60 1466632 debug optional libgenome0-dbgsym_1.3.11+svn20110227.4616-3_armhf.deb
9f8bd2fc1649f112a048f034e4e282f9 97528 libs optional libgenome0_1.3.11+svn20110227.4616-3_armhf.deb
d7abcd137bfd7dc1fb9e3ffbd3b9476d 6069 science optional libgenome_1.3.11+svn20110227.4616-3_armhf.buildinfo
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
libgenome-dev_1.3.11+svn20110227.4616-3_armhf.deb
-------------------------------------------------
new Debian package, version 2.0.
size 169504 bytes: control archive=2244 bytes.
1071 bytes, 27 lines control
3740 bytes, 52 lines md5sums
Package: libgenome-dev
Source: libgenome
Version: 1.3.11+svn20110227.4616-3
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1100
Depends: libgenome0 (= 1.3.11+svn20110227.4616-3)
Conflicts: libgenome-1.3-dev
Provides: libgenome-1.3-dev
Section: libdevel
Priority: optional
Homepage: https://sourceforge.net/projects/libgenome/
Description: toolkit for developing bioinformatic related software (devel)
libGenome is a freely available toolkit for developing bioinformatic related
software in C++. It is intended to take the hassle out of performing common
tasks on genetic sequence and annotation data.
.
Among other things, libGenome can help you:
.
* Read and write Multi-FastA format files
* Read and write GenBank flat file database entries
* Append, chop, truncate, reverse, complement, translate, and otherwise
mangle sequence data
* Access annotation in GenBank flat files
.
This is the development package containing the statically linked
library and the header files.
drwxr-xr-x root/root 0 2020-07-23 12:59 ./
drwxr-xr-x root/root 0 2020-07-23 12:59 ./usr/
drwxr-xr-x root/root 0 2020-07-23 12:59 ./usr/include/
drwxr-xr-x root/root 0 2020-07-23 12:59 ./usr/include/libGenome/
-rw-r--r-- root/root 22112 2020-07-23 12:59 ./usr/include/libGenome/IntervalSequenceTree.h
-rw-r--r-- root/root 1939 2020-07-23 12:59 ./usr/include/libGenome/OmpGuard.h
-rw-r--r-- root/root 2621 2020-07-23 12:59 ./usr/include/libGenome/gnABISource.h
-rw-r--r-- root/root 11124 2020-07-23 12:59 ./usr/include/libGenome/gnBaseFeature.h
-rw-r--r-- root/root 1939 2020-07-23 12:59 ./usr/include/libGenome/gnBaseFilter.h
-rw-r--r-- root/root 1943 2020-07-23 12:59 ./usr/include/libGenome/gnBaseHeader.h
-rw-r--r-- root/root 1796 2020-07-23 12:59 ./usr/include/libGenome/gnBaseQualifier.h
-rw-r--r-- root/root 5898 2020-07-23 12:59 ./usr/include/libGenome/gnBaseSource.h
-rw-r--r-- root/root 4693 2020-07-23 12:59 ./usr/include/libGenome/gnBaseSpec.h
-rw-r--r-- root/root 834 2020-07-23 12:59 ./usr/include/libGenome/gnClone.h
-rw-r--r-- root/root 5851 2020-07-23 12:59 ./usr/include/libGenome/gnCompare.h
-rw-r--r-- root/root 4548 2020-07-23 12:59 ./usr/include/libGenome/gnContigSpec.h
-rw-r--r-- root/root 3967 2020-07-23 12:59 ./usr/include/libGenome/gnDNASequence.h
-rw-r--r-- root/root 1815 2020-07-23 12:59 ./usr/include/libGenome/gnDataBaseSource.h
-rw-r--r-- root/root 1559 2020-07-23 12:59 ./usr/include/libGenome/gnDebug.h
-rw-r--r-- root/root 6166 2020-07-23 12:59 ./usr/include/libGenome/gnDefs.h
-rw-r--r-- root/root 1692 2020-07-23 12:59 ./usr/include/libGenome/gnException.h
-rw-r--r-- root/root 2969 2020-07-23 12:59 ./usr/include/libGenome/gnExceptionCode.h
-rw-r--r-- root/root 4847 2020-07-23 12:59 ./usr/include/libGenome/gnFASSource.h
-rw-r--r-- root/root 3139 2020-07-23 12:59 ./usr/include/libGenome/gnFastTranslator.h
-rw-r--r-- root/root 1827 2020-07-23 12:59 ./usr/include/libGenome/gnFeature.h
-rw-r--r-- root/root 5298 2020-07-23 12:59 ./usr/include/libGenome/gnFileContig.h
-rw-r--r-- root/root 2246 2020-07-23 12:59 ./usr/include/libGenome/gnFileSource.h
-rw-r--r-- root/root 5721 2020-07-23 12:59 ./usr/include/libGenome/gnFilter.h
-rw-r--r-- root/root 4699 2020-07-23 12:59 ./usr/include/libGenome/gnFragmentSpec.h
-rw-r--r-- root/root 4442 2020-07-23 12:59 ./usr/include/libGenome/gnGBKSource.h
-rw-r--r-- root/root 3924 2020-07-23 12:59 ./usr/include/libGenome/gnGenomeSpec.h
-rw-r--r-- root/root 11315 2020-07-23 12:59 ./usr/include/libGenome/gnLocation.h
-rw-r--r-- root/root 13275 2020-07-23 12:59 ./usr/include/libGenome/gnMultiSpec.h
-rw-r--r-- root/root 2346 2020-07-23 12:59 ./usr/include/libGenome/gnPosSpecificTranslator.h
-rw-r--r-- root/root 4168 2020-07-23 12:59 ./usr/include/libGenome/gnProteinSequence.h
-rw-r--r-- root/root 3717 2020-07-23 12:59 ./usr/include/libGenome/gnRAWSource.h
-rw-r--r-- root/root 3968 2020-07-23 12:59 ./usr/include/libGenome/gnRNASequence.h
-rw-r--r-- root/root 4121 2020-07-23 12:59 ./usr/include/libGenome/gnSEQSource.h
-rw-r--r-- root/root 24872 2020-07-23 12:59 ./usr/include/libGenome/gnSequence.h
-rw-r--r-- root/root 2094 2020-07-23 12:59 ./usr/include/libGenome/gnSetup.h
-rw-r--r-- root/root 7602 2020-07-23 12:59 ./usr/include/libGenome/gnSourceFactory.h
-rw-r--r-- root/root 3744 2020-07-23 12:59 ./usr/include/libGenome/gnSourceHeader.h
-rw-r--r-- root/root 3762 2020-07-23 12:59 ./usr/include/libGenome/gnSourceQualifier.h
-rw-r--r-- root/root 3003 2020-07-23 12:59 ./usr/include/libGenome/gnSourceSpec.h
-rw-r--r-- root/root 2760 2020-07-23 12:59 ./usr/include/libGenome/gnStringHeader.h
-rw-r--r-- root/root 2945 2020-07-23 12:59 ./usr/include/libGenome/gnStringQualifier.h
-rw-r--r-- root/root 2949 2020-07-23 12:59 ./usr/include/libGenome/gnStringSpec.h
-rw-r--r-- root/root 2152 2020-07-23 12:59 ./usr/include/libGenome/gnStringTools.h
-rw-r--r-- root/root 5438 2020-07-23 12:59 ./usr/include/libGenome/gnTranslator.h
-rw-r--r-- root/root 1067 2020-07-23 12:59 ./usr/include/libGenome/gnVersion.h
drwxr-xr-x root/root 0 2020-07-23 12:59 ./usr/lib/
drwxr-xr-x root/root 0 2020-07-23 12:59 ./usr/lib/arm-linux-gnueabihf/
-rw-r--r-- root/root 860436 2020-07-23 12:59 ./usr/lib/arm-linux-gnueabihf/libGenome.a
lrwxrwxrwx root/root 0 2020-07-23 12:59 ./usr/lib/arm-linux-gnueabihf/libGenome.so -> libGenome.so.0.1.3
drwxr-xr-x root/root 0 2020-07-23 12:59 ./usr/lib/arm-linux-gnueabihf/pkgconfig/
-rw-r--r-- root/root 278 2020-07-23 12:59 ./usr/lib/arm-linux-gnueabihf/pkgconfig/libGenome.pc
drwxr-xr-x root/root 0 2020-07-23 12:59 ./usr/share/
drwxr-xr-x root/root 0 2020-07-23 12:59 ./usr/share/doc/
drwxr-xr-x root/root 0 2020-07-23 12:59 ./usr/share/doc/libgenome-dev/
-rw-r--r-- root/root 472 2020-07-23 12:59 ./usr/share/doc/libgenome-dev/README.Debian
-rw-r--r-- root/root 2278 2020-07-23 12:59 ./usr/share/doc/libgenome-dev/changelog.Debian.gz
-rw-r--r-- root/root 516 2005-03-27 01:48 ./usr/share/doc/libgenome-dev/changelog.gz
-rw-r--r-- root/root 923 2020-07-23 12:59 ./usr/share/doc/libgenome-dev/copyright
libgenome0-dbgsym_1.3.11+svn20110227.4616-3_armhf.deb
-----------------------------------------------------
new Debian package, version 2.0.
size 1466632 bytes: control archive=568 bytes.
435 bytes, 13 lines control
106 bytes, 1 lines md5sums
Package: libgenome0-dbgsym
Source: libgenome
Version: 1.3.11+svn20110227.4616-3
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1552
Depends: libgenome0 (= 1.3.11+svn20110227.4616-3)
Section: debug
Priority: optional
Multi-Arch: same
Description: debug symbols for libgenome0
Build-Ids: af91b5fd92755df7083b63eb43440b16a0d64d66
drwxr-xr-x root/root 0 2020-07-23 12:59 ./
drwxr-xr-x root/root 0 2020-07-23 12:59 ./usr/
drwxr-xr-x root/root 0 2020-07-23 12:59 ./usr/lib/
drwxr-xr-x root/root 0 2020-07-23 12:59 ./usr/lib/debug/
drwxr-xr-x root/root 0 2020-07-23 12:59 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2020-07-23 12:59 ./usr/lib/debug/.build-id/af/
-rw-r--r-- root/root 1578256 2020-07-23 12:59 ./usr/lib/debug/.build-id/af/91b5fd92755df7083b63eb43440b16a0d64d66.debug
drwxr-xr-x root/root 0 2020-07-23 12:59 ./usr/share/
drwxr-xr-x root/root 0 2020-07-23 12:59 ./usr/share/doc/
lrwxrwxrwx root/root 0 2020-07-23 12:59 ./usr/share/doc/libgenome0-dbgsym -> libgenome0
libgenome0_1.3.11+svn20110227.4616-3_armhf.deb
----------------------------------------------
new Debian package, version 2.0.
size 97528 bytes: control archive=1116 bytes.
1062 bytes, 28 lines control
301 bytes, 4 lines md5sums
52 bytes, 1 lines shlibs
65 bytes, 2 lines triggers
Package: libgenome0
Source: libgenome
Version: 1.3.11+svn20110227.4616-3
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 326
Depends: libc6 (>= 2.4), libgcc-s1 (>= 3.5), libstdc++6 (>= 5.2)
Conflicts: libgenome-1.3-0v5
Replaces: libgenome-1.3-0v5
Provides: libgenome-1.3-0v5
Section: libs
Priority: optional
Multi-Arch: same
Homepage: https://sourceforge.net/projects/libgenome/
Description: toolkit for developing bioinformatic related software
libGenome is a freely available toolkit for developing bioinformatic related
software in C++. It is intended to take the hassle out of performing common
tasks on genetic sequence and annotation data.
.
Among other things, libGenome can help you:
.
* Read and write Multi-FastA format files
* Read and write GenBank flat file database entries
* Append, chop, truncate, reverse, complement, translate, and otherwise
mangle sequence data
* Access annotation in GenBank flat files
.
This package contains the dynamic library.
drwxr-xr-x root/root 0 2020-07-23 12:59 ./
drwxr-xr-x root/root 0 2020-07-23 12:59 ./usr/
drwxr-xr-x root/root 0 2020-07-23 12:59 ./usr/lib/
drwxr-xr-x root/root 0 2020-07-23 12:59 ./usr/lib/arm-linux-gnueabihf/
lrwxrwxrwx root/root 0 2020-07-23 12:59 ./usr/lib/arm-linux-gnueabihf/libGenome.so.0 -> libGenome.so.0.1.3
-rw-r--r-- root/root 316832 2020-07-23 12:59 ./usr/lib/arm-linux-gnueabihf/libGenome.so.0.1.3
drwxr-xr-x root/root 0 2020-07-23 12:59 ./usr/share/
drwxr-xr-x root/root 0 2020-07-23 12:59 ./usr/share/doc/
drwxr-xr-x root/root 0 2020-07-23 12:59 ./usr/share/doc/libgenome0/
-rw-r--r-- root/root 2278 2020-07-23 12:59 ./usr/share/doc/libgenome0/changelog.Debian.gz
-rw-r--r-- root/root 516 2005-03-27 01:48 ./usr/share/doc/libgenome0/changelog.gz
-rw-r--r-- root/root 923 2020-07-23 12:59 ./usr/share/doc/libgenome0/copyright
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 50128
Build-Time: 298
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 214
Job: libgenome_1.3.11+svn20110227.4616-3
Machine Architecture: armhf
Package: libgenome
Package-Time: 563
Source-Version: 1.3.11+svn20110227.4616-3
Space: 50128
Status: successful
Version: 1.3.11+svn20110227.4616-3
--------------------------------------------------------------------------------
Finished at 2020-07-28T05:51:23Z
Build needed 00:09:23, 50128k disc space