Raspbian Package Auto-Building

Build log for libbpp-seq (2.3.1-7) on armhf

libbpp-seq → 2.3.1-7 → armhf → 2017-07-24 05:25:18 

sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-02

+==============================================================================+
| libbpp-seq 2.3.1-7 (armhf)                   Mon, 24 Jul 2017 05:14:57 +0000 |
+==============================================================================+

Package: libbpp-seq
Version: 2.3.1-7
Source Version: 2.3.1-7
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-230b5f7b-e0b0-4160-b7b1-4aa1b405102c' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [10.0 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [11.9 MB]
Fetched 22.0 MB in 8s (2457 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'libbpp-seq' packaging is maintained in the 'Git' version control system at:
https://anonscm.debian.org/git/debian-med/libbpp-seq.git
Please use:
git clone https://anonscm.debian.org/git/debian-med/libbpp-seq.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 333 kB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main libbpp-seq 2.3.1-7 (dsc) [2119 B]
Get:2 http://172.17.0.1/private buster-staging/main libbpp-seq 2.3.1-7 (tar) [324 kB]
Get:3 http://172.17.0.1/private buster-staging/main libbpp-seq 2.3.1-7 (diff) [6892 B]
Fetched 333 kB in 5s (56.1 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/libbpp-seq-n3DJaV/libbpp-seq-2.3.1' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/libbpp-seq-n3DJaV' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install build-essential                                                      |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-ejoGpQ/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-ejoGpQ/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-ejoGpQ/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg:               imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg:              unchanged: 1
gpg:       secret keys read: 1
gpg:   secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-ejoGpQ/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-ejoGpQ/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-ejoGpQ/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-ejoGpQ/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-ejoGpQ/apt_archive ./ Packages [432 B]
Fetched 2108 B in 0s (4919 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install core build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 49 not upgraded.
Need to get 770 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-ejoGpQ/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [770 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 770 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12681 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any)

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper (>= 10), cmake, d-shlibs (>= 0.80), libbpp-core-dev (>= 2.3.1)
Filtered Build-Depends: debhelper (>= 10), cmake, d-shlibs (>= 0.80), libbpp-core-dev (>= 2.3.1)
dpkg-deb: building package 'sbuild-build-depends-libbpp-seq-dummy' in '/<<BUILDDIR>>/resolver-ejoGpQ/apt_archive/sbuild-build-depends-libbpp-seq-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy sbuild-build-depends-libbpp-seq-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-ejoGpQ/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-ejoGpQ/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-ejoGpQ/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-ejoGpQ/apt_archive ./ Sources [517 B]
Get:5 copy:/<<BUILDDIR>>/resolver-ejoGpQ/apt_archive ./ Packages [601 B]
Fetched 2451 B in 0s (5336 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install libbpp-seq build dependencies (apt-based resolver)
----------------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data
  d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism file gettext
  gettext-base groff-base intltool-debian libarchive-zip-perl libarchive13
  libbpp-core-dev libbpp-core3 libbsd0 libcroco3 libcurl3 libexpat1 libffi6
  libfile-stripnondeterminism-perl libglib2.0-0 libgnutls30 libgssapi-krb5-2
  libhogweed4 libicu57 libidn2-0 libjsoncpp1 libk5crypto3 libkeyutils1
  libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common liblzo2-2
  libmagic-mgc libmagic1 libnettle6 libnghttp2-14 libp11-kit0 libpipeline1
  libpsl5 librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh2-1
  libssl1.0.2 libtasn1-6 libtimedate-perl libtool libunistring2 libuv1 libxml2
  m4 man-db po-debconf
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
  vacation codeblocks eclipse ninja-build dh-make gettext-doc libasprintf-dev
  libgettextpo-dev groff lrzip gnutls-bin krb5-doc krb5-user libtool-doc
  gfortran | fortran95-compiler gcj-jdk m4-doc less www-browser
  libmail-box-perl
Recommended packages:
  curl | wget | lynx-cur ca-certificates libarchive-cpio-perl libglib2.0-data
  shared-mime-info xdg-user-dirs krb5-locales publicsuffix libsasl2-modules
  libltdl-dev xml-core libmail-sendmail-perl
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data
  d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism file gettext
  gettext-base groff-base intltool-debian libarchive-zip-perl libarchive13
  libbpp-core-dev libbpp-core3 libbsd0 libcroco3 libcurl3 libexpat1 libffi6
  libfile-stripnondeterminism-perl libglib2.0-0 libgnutls30 libgssapi-krb5-2
  libhogweed4 libicu57 libidn2-0 libjsoncpp1 libk5crypto3 libkeyutils1
  libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common liblzo2-2
  libmagic-mgc libmagic1 libnettle6 libnghttp2-14 libp11-kit0 libpipeline1
  libpsl5 librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh2-1
  libssl1.0.2 libtasn1-6 libtimedate-perl libtool libunistring2 libuv1 libxml2
  m4 man-db po-debconf sbuild-build-depends-libbpp-seq-dummy
0 upgraded, 63 newly installed, 0 to remove and 49 not upgraded.
Need to get 28.3 MB of archives.
After this operation, 105 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-ejoGpQ/apt_archive ./ sbuild-build-depends-libbpp-seq-dummy 0.invalid.0 [806 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.3-9 [1005 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.8.6-1 [95.7 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 9.0.12+nmu1 [178 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.4.2-1 [24.2 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.7.6.1-2 [1014 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf cmake-data all 3.7.2-1 [1216 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf liblzo2-2 armhf 2.08-1.2 [47.6 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf libnettle6 armhf 3.3-1 [204 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf libicu57 armhf 57.1-6 [7427 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf libxml2 armhf 2.9.4+dfsg1-3 [601 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf libarchive13 armhf 3.2.2-2 [254 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf libkeyutils1 armhf 1.5.9-9 [11.9 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf libkrb5support0 armhf 1.15.1-1 [58.3 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf libk5crypto3 armhf 1.15.1-1 [115 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf libkrb5-3 armhf 1.15.1-1 [263 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf libgssapi-krb5-2 armhf 1.15.1-1 [132 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf libunistring2 armhf 0.9.7-2 [351 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf libidn2-0 armhf 2.0.2-1 [55.7 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf libhogweed4 armhf 3.3-1 [126 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf libffi6 armhf 3.2.1-6 [18.7 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf libp11-kit0 armhf 0.23.3-5 [94.6 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf libtasn1-6 armhf 4.12-2 [46.0 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf libgnutls30 armhf 3.5.14-2 [806 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf libsasl2-modules-db armhf 2.1.27~101-g0780600+dfsg-3 [66.9 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf libsasl2-2 armhf 2.1.27~101-g0780600+dfsg-3 [98.1 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf libldap-common all 2.4.44+dfsg-8 [85.3 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf libldap-2.4-2 armhf 2.4.44+dfsg-8 [195 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf libnghttp2-14 armhf 1.24.0-1 [70.4 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf libpsl5 armhf 0.17.0-5 [42.0 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-1 [54.2 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf libssh2-1 armhf 1.8.0-1 [126 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf libssl1.0.2 armhf 1.0.2l-2 [893 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf libcurl3 armhf 7.52.1-5 [261 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf libexpat1 armhf 2.2.2-2 [66.3 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf libjsoncpp1 armhf 1.7.4-3 [66.2 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf libuv1 armhf 1.9.1-3 [73.2 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf cmake armhf 3.7.2-1 [2402 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.30-1 [222 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.30-1 [105 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.30-1 [63.4 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-2+b1 [117 kB]
Get:43 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.11-1 [29.3 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-1 [185 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-10 [338 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20161112.1 [73.4 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.15.1-2 [736 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-2 [433 kB]
Get:49 http://172.17.0.1/private buster-staging/main armhf d-shlibs all 0.81 [18.7 kB]
Get:50 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-2 [545 kB]
Get:51 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 14 [15.9 kB]
Get:52 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.59-1 [95.5 kB]
Get:53 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 0.038-1 [17.6 kB]
Get:54 http://172.17.0.1/private buster-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:55 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 0.038-1 [11.1 kB]
Get:56 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.52.3-1 [2576 kB]
Get:57 http://172.17.0.1/private buster-staging/main armhf libcroco3 armhf 0.6.12-1 [132 kB]
Get:58 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-2+b1 [1220 kB]
Get:59 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:60 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.20 [247 kB]
Get:61 http://172.17.0.1/private buster-staging/main armhf debhelper all 10.2.5 [961 kB]
Get:62 http://172.17.0.1/private buster-staging/main armhf libbpp-core3 armhf 2.3.1-4 [531 kB]
Get:63 http://172.17.0.1/private buster-staging/main armhf libbpp-core-dev armhf 2.3.1-4 [952 kB]
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Setting up cmake-data (3.7.2-1) ...
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Setting up m4 (1.4.18-1) ...
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Setting up libbsd0:armhf (0.8.6-1) ...
Setting up libxml2:armhf (2.9.4+dfsg1-3) ...
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Setting up libssl1.0.2:armhf (1.0.2l-2) ...
Setting up libssh2-1:armhf (1.8.0-1) ...
Processing triggers for libc-bin (2.24-12) ...
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Setting up libffi6:armhf (3.2.1-6) ...
Setting up libkeyutils1:armhf (1.5.9-9) ...
Setting up bsdmainutils (9.0.12+nmu1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
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Setting up libjsoncpp1:armhf (1.7.4-3) ...
Setting up libarchive13:armhf (3.2.2-2) ...
Setting up libbpp-core-dev (2.3.1-4) ...
Setting up libglib2.0-0:armhf (2.52.3-1) ...
No schema files found: doing nothing.
Setting up autoconf (2.69-10) ...
Setting up file (1:5.30-1) ...
Setting up libkrb5support0:armhf (1.15.1-1) ...
Setting up libcroco3:armhf (0.6.12-1) ...
Setting up libp11-kit0:armhf (0.23.3-5) ...
Setting up automake (1:1.15.1-2) ...
update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode
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Not building database; man-db/auto-update is not 'true'.
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Setting up libk5crypto3:armhf (1.15.1-1) ...
Setting up gettext (0.19.8.1-2+b1) ...
Setting up libgnutls30:armhf (3.5.14-2) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-1) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up libldap-2.4-2:armhf (2.4.44+dfsg-8) ...
Setting up libkrb5-3:armhf (1.15.1-1) ...
Setting up po-debconf (1.0.20) ...
Setting up libgssapi-krb5-2:armhf (1.15.1-1) ...
Setting up libcurl3:armhf (7.52.1-5) ...
Setting up cmake (3.7.2-1) ...
Setting up dh-strip-nondeterminism (0.038-1) ...
Setting up debhelper (10.2.5) ...
Setting up dh-autoreconf (14) ...
Setting up sbuild-build-depends-libbpp-seq-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.24-12) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.4.0-79-generic armhf (armv8l)
Toolchain package versions: binutils_2.28-6 dpkg-dev_1.18.24 g++-6_6.3.0-18+rpi1 gcc-6_6.3.0-18+rpi1 libc6-dev_2.24-12 libstdc++-6-dev_6.3.0-18+rpi1 libstdc++6_6.3.0-18+rpi1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch
Package versions: adduser_3.115 apt_1.4.6 autoconf_2.69-10 automake_1:1.15.1-2 autopoint_0.19.8.1-2 autotools-dev_20161112.1 base-files_9.9+rpi1 base-passwd_3.5.43 bash_4.4-5 binutils_2.28-6 bsdmainutils_9.0.12+nmu1 bsdutils_1:2.29.2-1 build-essential_12.3 bzip2_1.0.6-8.1 cmake_3.7.2-1 cmake-data_3.7.2-1 coreutils_8.26-3 cpio_2.11+dfsg-6 cpp_4:6.3.0-4 cpp-6_6.3.0-18+rpi1 d-shlibs_0.81 dash_0.5.8-2.4 debconf_1.5.61 debhelper_10.2.5 debianutils_4.8.1.1 dh-autoreconf_14 dh-strip-nondeterminism_0.038-1 diffutils_1:3.5-3 dmsetup_2:1.02.137-2 dpkg_1.18.24 dpkg-dev_1.18.24 e2fslibs_1.43.4-2 e2fsprogs_1.43.4-2 fakeroot_1.21-3.1 file_1:5.30-1 findutils_4.6.0+git+20161106-2 g++_4:6.3.0-4 g++-6_6.3.0-18+rpi1 gcc_4:6.3.0-4 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.3-14 gcc-5-base_5.4.1-4 gcc-6_6.3.0-18+rpi1 gcc-6-base_6.3.0-18+rpi1 gettext_0.19.8.1-2+b1 gettext-base_0.19.8.1-2+b1 gnupg_2.1.18-8 gnupg-agent_2.1.18-8 gpgv_2.1.18-8 grep_2.27-2 groff-base_1.22.3-9 gzip_1.6-5 hostname_3.18 init-system-helpers_1.48 initramfs-tools_0.130 initramfs-tools-core_0.130 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-9+rpi1 kmod_24-1 libacl1_2.2.52-3 libapparmor1_2.11.0-3 libapt-pkg5.0_1.4.6 libarchive-zip-perl_1.59-1 libarchive13_3.2.2-2 libasan3_6.3.0-18+rpi1 libassuan0_2.4.3-2 libatomic1_6.3.0-18+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.7.7-1 libaudit1_1:2.7.7-1 libblkid1_2.29.2-1 libbpp-core-dev_2.3.1-4 libbpp-core3_2.3.1-4 libbsd0_0.8.6-1 libbz2-1.0_1.0.6-8.1 libc-bin_2.24-12 libc-dev-bin_2.24-12 libc6_2.24-12 libc6-dev_2.24-12 libcap-ng0_0.7.7-3 libcap2_1:2.25-1 libcc1-0_6.3.0-18+rpi1 libcomerr2_1.43.4-2 libcroco3_0.6.12-1 libcryptsetup4_2:1.7.3-4 libcurl3_7.52.1-5 libdb5.3_5.3.28-12 libdbus-1-3_1.10.18-1 libdebconfclient0_0.228 libdevmapper1.02.1_2:1.02.137-2 libdpkg-perl_1.18.24 libdrm2_2.4.74-1 libexpat1_2.2.2-2 libfakeroot_1.21-3.1 libfdisk1_2.29.2-1 libffi6_3.2.1-6 libfile-stripnondeterminism-perl_0.038-1 libgcc-6-dev_6.3.0-18+rpi1 libgcc1_1:6.3.0-18+rpi1 libgcrypt20_1.7.7-2 libgdbm3_1.8.3-14 libglib2.0-0_2.52.3-1 libgmp10_2:6.1.2+dfsg-1 libgnutls30_3.5.14-2 libgomp1_6.3.0-18+rpi1 libgpg-error0_1.26-2 libgssapi-krb5-2_1.15.1-1 libhogweed4_3.3-1 libicu57_57.1-6 libidn11_1.33-1 libidn2-0_2.0.2-1 libip4tc0_1.6.0+snapshot20161117-6 libisl15_0.18-1 libjsoncpp1_1.7.4-3 libk5crypto3_1.15.1-1 libkeyutils1_1.5.9-9 libklibc_2.0.4-9+rpi1 libkmod2_24-1 libkrb5-3_1.15.1-1 libkrb5support0_1.15.1-1 libksba8_1.3.5-2 libldap-2.4-2_2.4.44+dfsg-8 libldap-common_2.4.44+dfsg-8 liblocale-gettext-perl_1.07-3+b1 liblz4-1_0.0~r131-2 liblzma5_5.2.2-1.2 liblzo2-2_2.08-1.2 libmagic-mgc_1:5.30-1 libmagic1_1:5.30-1 libmount1_2.29.2-1 libmpc3_1.0.3-1 libmpfr4_3.1.5-1 libncurses5_6.0+20161126-1 libncursesw5_6.0+20161126-1 libnettle6_3.3-1 libnghttp2-14_1.24.0-1 libnih-dbus1_1.0.3-8 libnih1_1.0.3-8 libnpth0_1.3-1 libp11-kit0_0.23.3-5 libpam-modules_1.1.8-3.6 libpam-modules-bin_1.1.8-3.6 libpam-runtime_1.1.8-3.6 libpam0g_1.1.8-3.6 libpcre3_2:8.39-3 libperl5.24_5.24.1-4 libpipeline1_1.4.2-1 libplymouth4_0.9.2-4 libpng16-16_1.6.29-3 libprocps6_2:3.3.12-3 libpsl5_0.17.0-5 libreadline7_7.0-3 librtmp1_2.4+20151223.gitfa8646d.1-1 libsasl2-2_2.1.27~101-g0780600+dfsg-3 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3 libseccomp2_2.3.1-2.1 libselinux1_2.6-3 libsemanage-common_2.6-2 libsemanage1_2.6-2 libsepol1_2.6-2 libsigsegv2_2.11-1 libsmartcols1_2.29.2-1 libsqlite3-0_3.16.2-5 libss2_1.43.4-2 libssh2-1_1.8.0-1 libssl1.0.2_1.0.2l-2 libstdc++-6-dev_6.3.0-18+rpi1 libstdc++6_6.3.0-18+rpi1 libsystemd0_233-9 libtasn1-6_4.12-2 libtext-charwidth-perl_0.04-7+b7 libtext-iconv-perl_1.7-5+b8 libtext-wrapi18n-perl_0.06-7.1 libtimedate-perl_2.3000-2 libtinfo5_6.0+20161126-1 libtool_2.4.6-2 libubsan0_6.3.0-18+rpi1 libudev1_233-9 libunistring2_0.9.7-2 libustr-1.0-1_1.0.4-6 libuuid1_2.29.2-1 libuv1_1.9.1-3 libxml2_2.9.4+dfsg1-3 linux-base_4.5 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch login_1:4.4-4.1 lsb-base_9.20161125+rpi1 m4_1.4.18-1 make_4.1-9.1 makedev_2.3.1-93 man-db_2.7.6.1-2 mawk_1.3.3-17 mount_2.29.2-1 mountall_2.54 multiarch-support_2.24-12 ncurses-base_6.0+20161126-1 ncurses-bin_6.0+20161126-1 passwd_1:4.4-4.1 patch_2.7.5-1 perl_5.24.1-4 perl-base_5.24.1-4 perl-modules-5.24_5.24.1-4 pinentry-curses_1.0.0-2 plymouth_0.9.2-4 po-debconf_1.0.20 procps_2:3.3.12-3 raspbian-archive-keyring_20120528.2 readline-common_7.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-libbpp-seq-dummy_0.invalid.0 sed_4.4-1 sensible-utils_0.0.9 systemd_233-9 sysvinit-utils_2.88dsf-59.9 tar_1.29b-1.1 tzdata_2017b-2 udev_233-9 util-linux_2.29.2-1 xz-utils_5.2.2-1.2 zlib1g_1:1.2.8.dfsg-5

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Wed Jul 19 11:38:14 2017 UTC
gpgv:                using RSA key 578A0494D1C646D1
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./libbpp-seq_2.3.1-7.dsc
dpkg-source: info: extracting libbpp-seq in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking libbpp-seq_2.3.1.orig.tar.gz
dpkg-source: info: unpacking libbpp-seq_2.3.1-7.debian.tar.xz
dpkg-source: info: applying rm_VectorProbabilisticSiteContainer.patch
dpkg-source: info: applying relax_test_timeout.patch

Check disk space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-230b5f7b-e0b0-4160-b7b1-4aa1b405102c
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd

dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package libbpp-seq
dpkg-buildpackage: info: source version 2.3.1-7
dpkg-buildpackage: info: source distribution unstable
 dpkg-source --before-build libbpp-seq-2.3.1
dpkg-buildpackage: info: host architecture armhf
 fakeroot debian/rules clean
dh clean
   dh_testdir
   dh_auto_clean
   dh_autoreconf_clean
   dh_clean
 debian/rules build-arch
dh build-arch
   dh_testdir -a
   dh_update_autotools_config -a
   dh_autoreconf -a
   dh_auto_configure -a
	cmake .. -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var
-- The CXX compiler identification is GNU 6.3.0
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- bpp-core 3.0.0 found:
--   static lib: /usr/lib/arm-linux-gnueabihf/libbpp-core.a
--   shared lib: /usr/lib/arm-linux-gnueabihf/libbpp-core.so.3.0.0
--   includes: /usr/include
-- Could NOT find Doxygen (missing:  DOXYGEN_EXECUTABLE) 
-- Configuring done
-- Generating done
-- Build files have been written to: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf
   dh_auto_build -a
	make -j4
make[1]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -H/<<PKGBUILDDIR>> -B/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f src/CMakeFiles/bpp-seq-shared.dir/build.make src/CMakeFiles/bpp-seq-shared.dir/depend
make -f src/CMakeFiles/bpp-seq-static.dir/build.make src/CMakeFiles/bpp-seq-static.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/src /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src/CMakeFiles/bpp-seq-static.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/src /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src/CMakeFiles/bpp-seq-shared.dir/DependInfo.cmake --color=
Scanning dependencies of target bpp-seq-static
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f src/CMakeFiles/bpp-seq-static.dir/build.make src/CMakeFiles/bpp-seq-static.dir/build
Scanning dependencies of target bpp-seq-shared
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f src/CMakeFiles/bpp-seq-shared.dir/build.make src/CMakeFiles/bpp-seq-shared.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  0%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/AbstractAlphabet.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/AbstractAlphabet.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/AbstractAlphabet.cpp
[  1%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/AlphabetExceptions.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/AlphabetExceptions.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/AlphabetExceptions.cpp
[  1%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/AbstractAlphabet.cpp.o
[  1%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/AlphabetTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/AbstractAlphabet.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/AbstractAlphabet.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/AlphabetTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/AlphabetTools.cpp
[  2%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/BinaryAlphabet.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/BinaryAlphabet.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/BinaryAlphabet.cpp
[  3%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/AlphabetExceptions.cpp.o
[  3%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/AlphabetTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/AlphabetExceptions.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/AlphabetExceptions.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/AlphabetTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/AlphabetTools.cpp
[  3%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/CaseMaskedAlphabet.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/CaseMaskedAlphabet.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/CaseMaskedAlphabet.cpp
[  4%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/CodonAlphabet.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/CodonAlphabet.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/CodonAlphabet.cpp
[  5%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/BinaryAlphabet.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/BinaryAlphabet.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/BinaryAlphabet.cpp
[  5%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/CaseMaskedAlphabet.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/CaseMaskedAlphabet.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/CaseMaskedAlphabet.cpp
[  6%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/CodonAlphabet.cpp.o
[  7%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/DNA.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/CodonAlphabet.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/CodonAlphabet.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/DNA.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/DNA.cpp
[  7%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/DefaultAlphabet.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/DefaultAlphabet.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/DefaultAlphabet.cpp
[  7%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/DNA.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/DNA.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/DNA.cpp
[  8%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/IntegerAlphabet.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/IntegerAlphabet.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/IntegerAlphabet.cpp
[  8%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/LetterAlphabet.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/LetterAlphabet.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/LetterAlphabet.cpp
[  9%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/LexicalAlphabet.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/LexicalAlphabet.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/LexicalAlphabet.cpp
[ 10%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/DefaultAlphabet.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/DefaultAlphabet.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/DefaultAlphabet.cpp
[ 10%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/IntegerAlphabet.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/IntegerAlphabet.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/IntegerAlphabet.cpp
[ 11%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/LetterAlphabet.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/LetterAlphabet.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/LetterAlphabet.cpp
[ 11%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/NumericAlphabet.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/NumericAlphabet.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/NumericAlphabet.cpp
[ 11%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/LexicalAlphabet.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/LexicalAlphabet.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/LexicalAlphabet.cpp
[ 12%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/NumericAlphabet.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/NumericAlphabet.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/NumericAlphabet.cpp
[ 13%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/ProteicAlphabet.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/ProteicAlphabet.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/ProteicAlphabet.cpp
[ 13%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/RNA.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/RNA.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/RNA.cpp
In file included from /usr/include/c++/6/map:61:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/AbstractAlphabet.h:52,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/NumericAlphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/NumericAlphabet.cpp:40:
/usr/include/c++/6/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = unsigned int; _Compare = std::less<double>; _Alloc = std::allocator<std::pair<const double, unsigned int> >]':
/usr/include/c++/6/bits/stl_map.h:483:4: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, unsigned int>, std::_Select1st<std::pair<const double, unsigned int> >, std::less<double>, std::allocator<std::pair<const double, unsigned int> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const double, unsigned int> >}' will change in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
    ^~~
In file included from /usr/include/c++/6/map:60:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/AbstractAlphabet.h:52,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/NumericAlphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/NumericAlphabet.cpp:40:
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const double&>, std::tuple<>}; _Key = double; _Val = std::pair<const double, unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const double, unsigned int> >; _Compare = std::less<double>; _Alloc = std::allocator<std::pair<const double, unsigned int> >]':
/usr/include/c++/6/bits/stl_tree.h:2193:7: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, unsigned int>, std::_Select1st<std::pair<const double, unsigned int> >, std::less<double>, std::allocator<std::pair<const double, unsigned int> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const double, unsigned int> >}' will change in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = double; _Val = std::pair<const double, unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const double, unsigned int> >; _Compare = std::less<double>; _Alloc = std::allocator<std::pair<const double, unsigned int> >]':
/usr/include/c++/6/bits/stl_tree.h:1928:5: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, unsigned int>, std::_Select1st<std::pair<const double, unsigned int> >, std::less<double>, std::allocator<std::pair<const double, unsigned int> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const double, unsigned int> >}' will change in GCC 7.1
     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 14%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/ProteicAlphabet.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/ProteicAlphabet.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/ProteicAlphabet.cpp
In file included from /usr/include/c++/6/map:61:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/AbstractAlphabet.h:52,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/NumericAlphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/NumericAlphabet.cpp:40:
/usr/include/c++/6/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = unsigned int; _Compare = std::less<double>; _Alloc = std::allocator<std::pair<const double, unsigned int> >]':
/usr/include/c++/6/bits/stl_map.h:483:4: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, unsigned int>, std::_Select1st<std::pair<const double, unsigned int> >, std::less<double>, std::allocator<std::pair<const double, unsigned int> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const double, unsigned int> >}' will change in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
    ^~~
In file included from /usr/include/c++/6/map:60:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/AbstractAlphabet.h:52,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/NumericAlphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/NumericAlphabet.cpp:40:
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const double&>, std::tuple<>}; _Key = double; _Val = std::pair<const double, unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const double, unsigned int> >; _Compare = std::less<double>; _Alloc = std::allocator<std::pair<const double, unsigned int> >]':
/usr/include/c++/6/bits/stl_tree.h:2193:7: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, unsigned int>, std::_Select1st<std::pair<const double, unsigned int> >, std::less<double>, std::allocator<std::pair<const double, unsigned int> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const double, unsigned int> >}' will change in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = double; _Val = std::pair<const double, unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const double, unsigned int> >; _Compare = std::less<double>; _Alloc = std::allocator<std::pair<const double, unsigned int> >]':
/usr/include/c++/6/bits/stl_tree.h:1928:5: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, unsigned int>, std::_Select1st<std::pair<const double, unsigned int> >, std::less<double>, std::allocator<std::pair<const double, unsigned int> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const double, unsigned int> >}' will change in GCC 7.1
     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 15%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/RNY.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/RNY.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/RNY.cpp
[ 15%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/WordAlphabet.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/WordAlphabet.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/WordAlphabet.cpp
[ 16%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/AlphabetIndex/AAIndex1Entry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/AlphabetIndex/AAIndex1Entry.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex1Entry.cpp
[ 16%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/RNA.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/RNA.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/RNA.cpp
[ 16%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp
In file included from /usr/include/c++/6/vector:64:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex1.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex1Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex1Entry.cpp:40:
/usr/include/c++/6/bits/stl_vector.h: In copy constructor 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:324:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
    std::__uninitialized_copy_a(__x.begin(), __x.end(),
    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
           this->_M_impl._M_start,
           ~~~~~~~~~~~~~~~~~~~~~~~
           _M_get_Tp_allocator());
           ~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex1.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex1Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex1Entry.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:61:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex1.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex1Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex1Entry.cpp:40:
/usr/include/c++/6/bits/cpp_type_traits.h: In function '_Iterator std::__miter_base(_Iterator) [with _Iterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >]':
/usr/include/c++/6/bits/cpp_type_traits.h:408:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     __miter_base(_Iterator __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex1.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex1Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex1Entry.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex1.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex1Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex1Entry.cpp:40:
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = const double*; _Container = std::vector<double>]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     __niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container> __it)
     ^~~~~~~~~~~~
[ 17%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex1.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex1Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex1Entry.cpp:40:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
         __result));
                  ^
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
[ 18%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/RNY.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/RNY.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/RNY.cpp
[ 18%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp
In file included from /usr/include/c++/6/vector:64:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_vector.h: In copy constructor 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:324:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
    std::__uninitialized_copy_a(__x.begin(), __x.end(),
    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
           this->_M_impl._M_start,
           ~~~~~~~~~~~~~~~~~~~~~~~
           _M_get_Tp_allocator());
           ~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:69:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/vector.tcc:195:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
          __x.end());
                   ^
/usr/include/c++/6/bits/vector.tcc:195:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::_Destroy(std::copy(__x.begin(), __x.end(), begin()),
        ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        end(), _M_get_Tp_allocator());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:8: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::_Destroy(std::copy(__x.begin(), __x.end(), begin()),
        ^~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
In file included from /usr/include/c++/6/vector:64:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_vector.h: In member function 'std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(std::vector<_Tp, _Alloc>::size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:1219:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         _M_allocate_and_copy(size_type __n,
         ^~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_vector.h:1219:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_vector.h:1225:8: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::__uninitialized_copy_a(__first, __last, __result,
        ^~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __result));
                  ^
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_construct.h: In function 'void std::_Destroy(_ForwardIterator, _ForwardIterator, std::allocator<_T2>&) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >; _Tp = double]':
/usr/include/c++/6/bits/stl_construct.h:148:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     _Destroy(_ForwardIterator __first, _ForwardIterator __last,
     ^~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:148:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_construct.h:151:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
       _Destroy(__first, __last);
       ^~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:61:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/cpp_type_traits.h: In function '_Iterator std::__miter_base(_Iterator) [with _Iterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/cpp_type_traits.h:408:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __miter_base(_Iterator __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_construct.h: In function 'void std::_Destroy(_ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_construct.h:122:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     _Destroy(_ForwardIterator __first, _ForwardIterator __last)
     ^~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:122:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_construct.h:126:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
       std::_Destroy_aux<__has_trivial_destructor(_Value_type)>::
       ^~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_move_if_noexcept_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = double*; _ForwardIterator = double*; _Allocator = std::allocator<double>]':
/usr/include/c++/6/bits/stl_uninitialized.h:304:69: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
   _GLIBCXX_MAKE_MOVE_IF_NOEXCEPT_ITERATOR(__last), __result, __alloc);
                                                                     ^
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = const double*; _Container = std::vector<double, std::allocator<double> >]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container> __it)
     ^~~~~~~~~~~~
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = double*; _Container = std::vector<double, std::allocator<double> >]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_construct.h: In static member function 'static void std::_Destroy_aux<true>::__destroy(_ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_construct.h:112:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __destroy(_ForwardIterator, _ForwardIterator) { }
         ^~~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:112:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __result));
                  ^
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = std::move_iterator<double*>; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_iterator.h: In function 'decltype (std::__miter_base(__it.base())) std::__miter_base(std::move_iterator<_IteratorL>) [with _Iterator = double*]':
/usr/include/c++/6/bits/stl_iterator.h:1243:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __miter_base(move_iterator<_Iterator> __it)
     ^~~~~~~~~~~~
[ 19%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp
In file included from /usr/include/c++/6/vector:64:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_vector.h: In copy constructor 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:324:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
    std::__uninitialized_copy_a(__x.begin(), __x.end(),
    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
           this->_M_impl._M_start,
           ~~~~~~~~~~~~~~~~~~~~~~~
           _M_get_Tp_allocator());
           ~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:69:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/vector.tcc:195:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
          __x.end());
                   ^
/usr/include/c++/6/bits/vector.tcc:195:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::_Destroy(std::copy(__x.begin(), __x.end(), begin()),
        ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        end(), _M_get_Tp_allocator());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:8: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::_Destroy(std::copy(__x.begin(), __x.end(), begin()),
        ^~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
In file included from /usr/include/c++/6/vector:64:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_vector.h: In member function 'std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(std::vector<_Tp, _Alloc>::size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:1219:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         _M_allocate_and_copy(size_type __n,
         ^~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_vector.h:1219:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_vector.h:1225:8: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::__uninitialized_copy_a(__first, __last, __result,
        ^~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __result));
                  ^
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_construct.h: In function 'void std::_Destroy(_ForwardIterator, _ForwardIterator, std::allocator<_T2>&) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >; _Tp = double]':
/usr/include/c++/6/bits/stl_construct.h:148:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     _Destroy(_ForwardIterator __first, _ForwardIterator __last,
     ^~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:148:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_construct.h:151:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
       _Destroy(__first, __last);
       ^~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:61:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/cpp_type_traits.h: In function '_Iterator std::__miter_base(_Iterator) [with _Iterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/cpp_type_traits.h:408:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __miter_base(_Iterator __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_construct.h: In function 'void std::_Destroy(_ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_construct.h:122:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     _Destroy(_ForwardIterator __first, _ForwardIterator __last)
     ^~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:122:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_construct.h:126:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
       std::_Destroy_aux<__has_trivial_destructor(_Value_type)>::
       ^~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_move_if_noexcept_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = double*; _ForwardIterator = double*; _Allocator = std::allocator<double>]':
/usr/include/c++/6/bits/stl_uninitialized.h:304:69: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
   _GLIBCXX_MAKE_MOVE_IF_NOEXCEPT_ITERATOR(__last), __result, __alloc);
                                                                     ^
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = const double*; _Container = std::vector<double, std::allocator<double> >]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container> __it)
     ^~~~~~~~~~~~
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = double*; _Container = std::vector<double, std::allocator<double> >]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_construct.h: In static member function 'static void std::_Destroy_aux<true>::__destroy(_ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_construct.h:112:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __destroy(_ForwardIterator, _ForwardIterator) { }
         ^~~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:112:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __result));
                  ^
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = std::move_iterator<double*>; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_iterator.h: In function 'decltype (std::__miter_base(__it.base())) std::__miter_base(std::move_iterator<_IteratorL>) [with _Iterator = double*]':
/usr/include/c++/6/bits/stl_iterator.h:1243:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __miter_base(move_iterator<_Iterator> __it)
     ^~~~~~~~~~~~
[ 19%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp
[ 19%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/WordAlphabet.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/WordAlphabet.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/WordAlphabet.cpp
In file included from /usr/include/c++/6/vector:64:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_vector.h: In copy constructor 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:324:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
    std::__uninitialized_copy_a(__x.begin(), __x.end(),
    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
           this->_M_impl._M_start,
           ~~~~~~~~~~~~~~~~~~~~~~~
           _M_get_Tp_allocator());
           ~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:69:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/vector.tcc:195:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
          __x.end());
                   ^
/usr/include/c++/6/bits/vector.tcc:195:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::_Destroy(std::copy(__x.begin(), __x.end(), begin()),
        ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        end(), _M_get_Tp_allocator());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:8: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::_Destroy(std::copy(__x.begin(), __x.end(), begin()),
        ^~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
In file included from /usr/include/c++/6/vector:64:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_vector.h: In member function 'std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(std::vector<_Tp, _Alloc>::size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:1219:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         _M_allocate_and_copy(size_type __n,
         ^~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_vector.h:1219:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_vector.h:1225:8: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::__uninitialized_copy_a(__first, __last, __result,
        ^~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __result));
                  ^
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_construct.h: In function 'void std::_Destroy(_ForwardIterator, _ForwardIterator, std::allocator<_T2>&) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >; _Tp = double]':
/usr/include/c++/6/bits/stl_construct.h:148:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     _Destroy(_ForwardIterator __first, _ForwardIterator __last,
     ^~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:148:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_construct.h:151:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
       _Destroy(__first, __last);
       ^~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:61:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/cpp_type_traits.h: In function '_Iterator std::__miter_base(_Iterator) [with _Iterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/cpp_type_traits.h:408:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __miter_base(_Iterator __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_construct.h: In function 'void std::_Destroy(_ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_construct.h:122:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     _Destroy(_ForwardIterator __first, _ForwardIterator __last)
     ^~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:122:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_construct.h:126:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
       std::_Destroy_aux<__has_trivial_destructor(_Value_type)>::
       ^~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = const double*; _Container = std::vector<double, std::allocator<double> >]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container> __it)
     ^~~~~~~~~~~~
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = double*; _Container = std::vector<double, std::allocator<double> >]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_construct.h: In static member function 'static void std::_Destroy_aux<true>::__destroy(_ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_construct.h:112:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __destroy(_ForwardIterator, _ForwardIterator) { }
         ^~~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:112:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __result));
                  ^
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_move_if_noexcept_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = double*; _ForwardIterator = double*; _Allocator = std::allocator<double>]':
/usr/include/c++/6/bits/stl_uninitialized.h:304:69: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
   _GLIBCXX_MAKE_MOVE_IF_NOEXCEPT_ITERATOR(__last), __result, __alloc);
                                                                     ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = std::move_iterator<double*>; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_iterator.h: In function 'decltype (std::__miter_base(__it.base())) std::__miter_base(std::move_iterator<_IteratorL>) [with _Iterator = double*]':
/usr/include/c++/6/bits/stl_iterator.h:1243:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __miter_base(move_iterator<_Iterator> __it)
     ^~~~~~~~~~~~
[ 20%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/AlphabetIndex/SimpleScore.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/AlphabetIndex/SimpleScore.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp
In file included from /usr/include/c++/6/vector:64:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:45:
/usr/include/c++/6/bits/stl_vector.h: In copy constructor 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:324:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
    std::__uninitialized_copy_a(__x.begin(), __x.end(),
    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
           this->_M_impl._M_start,
           ~~~~~~~~~~~~~~~~~~~~~~~
           _M_get_Tp_allocator());
           ~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:69:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:45:
/usr/include/c++/6/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/vector.tcc:195:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
          __x.end());
                   ^
/usr/include/c++/6/bits/vector.tcc:195:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::_Destroy(std::copy(__x.begin(), __x.end(), begin()),
        ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        end(), _M_get_Tp_allocator());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:8: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::_Destroy(std::copy(__x.begin(), __x.end(), begin()),
        ^~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:45:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
In file included from /usr/include/c++/6/vector:64:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:45:
/usr/include/c++/6/bits/stl_vector.h: In member function 'std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(std::vector<_Tp, _Alloc>::size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:1219:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         _M_allocate_and_copy(size_type __n,
         ^~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_vector.h:1219:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_vector.h:1225:8: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::__uninitialized_copy_a(__first, __last, __result,
        ^~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __result));
                  ^
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:45:
/usr/include/c++/6/bits/stl_construct.h: In function 'void std::_Destroy(_ForwardIterator, _ForwardIterator, std::allocator<_T2>&) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >; _Tp = double]':
/usr/include/c++/6/bits/stl_construct.h:148:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     _Destroy(_ForwardIterator __first, _ForwardIterator __last,
     ^~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:148:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_construct.h:151:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
       _Destroy(__first, __last);
       ^~~~~~~~
In file included from /usr/include/c++/6/vector:64:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:43:
/usr/include/c++/6/bits/stl_vector.h: In copy constructor 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:324:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
    std::__uninitialized_copy_a(__x.begin(), __x.end(),
    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
           this->_M_impl._M_start,
           ~~~~~~~~~~~~~~~~~~~~~~~
           _M_get_Tp_allocator());
           ~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:45:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:69:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:43:
/usr/include/c++/6/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/vector.tcc:195:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
          __x.end());
                   ^
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
/usr/include/c++/6/bits/vector.tcc:195:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::_Destroy(std::copy(__x.begin(), __x.end(), begin()),
        ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        end(), _M_get_Tp_allocator());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:8: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::_Destroy(std::copy(__x.begin(), __x.end(), begin()),
        ^~~
In file included from /usr/include/c++/6/bits/stl_algobase.h:61:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:41:
/usr/include/c++/6/bits/cpp_type_traits.h: In function '_Iterator std::__miter_base(_Iterator) [with _Iterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/cpp_type_traits.h:408:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __miter_base(_Iterator __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:45:
/usr/include/c++/6/bits/stl_construct.h: In function 'void std::_Destroy(_ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_construct.h:122:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     _Destroy(_ForwardIterator __first, _ForwardIterator __last)
     ^~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:122:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_construct.h:126:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
       std::_Destroy_aux<__has_trivial_destructor(_Value_type)>::
       ^~~
[ 21%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/AlphabetIndex/AAIndex1Entry.cpp.o
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:45:
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/AlphabetIndex/AAIndex1Entry.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex1Entry.cpp
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:41:
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = const double*; _Container = std::vector<double, std::allocator<double> >]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container> __it)
     ^~~~~~~~~~~~
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = double*; _Container = std::vector<double, std::allocator<double> >]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:45:
/usr/include/c++/6/bits/stl_construct.h: In static member function 'static void std::_Destroy_aux<true>::__destroy(_ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_construct.h:112:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __destroy(_ForwardIterator, _ForwardIterator) { }
         ^~~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:112:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:43:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __result));
                  ^
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
In file included from /usr/include/c++/6/vector:64:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:43:
/usr/include/c++/6/bits/stl_vector.h: In member function 'std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(std::vector<_Tp, _Alloc>::size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:1219:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         _M_allocate_and_copy(size_type __n,
         ^~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_vector.h:1219:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_vector.h:1225:8: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::__uninitialized_copy_a(__first, __last, __result,
        ^~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:45:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_move_if_noexcept_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = double*; _ForwardIterator = double*; _Allocator = std::allocator<double>]':
/usr/include/c++/6/bits/stl_uninitialized.h:304:69: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
   _GLIBCXX_MAKE_MOVE_IF_NOEXCEPT_ITERATOR(__last), __result, __alloc);
                                                                     ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __result));
                  ^
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:43:
/usr/include/c++/6/bits/stl_construct.h: In function 'void std::_Destroy(_ForwardIterator, _ForwardIterator, std::allocator<_T2>&) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >; _Tp = double]':
/usr/include/c++/6/bits/stl_construct.h:148:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     _Destroy(_ForwardIterator __first, _ForwardIterator __last,
     ^~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:148:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_construct.h:151:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
       _Destroy(__first, __last);
       ^~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:45:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = std::move_iterator<double*>; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:41:
/usr/include/c++/6/bits/stl_iterator.h: In function 'decltype (std::__miter_base(__it.base())) std::__miter_base(std::move_iterator<_IteratorL>) [with _Iterator = double*]':
/usr/include/c++/6/bits/stl_iterator.h:1243:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __miter_base(move_iterator<_Iterator> __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:43:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:61:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/cpp_type_traits.h: In function '_Iterator std::__miter_base(_Iterator) [with _Iterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/cpp_type_traits.h:408:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __miter_base(_Iterator __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:43:
/usr/include/c++/6/bits/stl_construct.h: In function 'void std::_Destroy(_ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_construct.h:122:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     _Destroy(_ForwardIterator __first, _ForwardIterator __last)
     ^~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:122:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_construct.h:126:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
       std::_Destroy_aux<__has_trivial_destructor(_Value_type)>::
       ^~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:43:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_move_if_noexcept_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = double*; _ForwardIterator = double*; _Allocator = std::allocator<double>]':
/usr/include/c++/6/bits/stl_uninitialized.h:304:69: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
   _GLIBCXX_MAKE_MOVE_IF_NOEXCEPT_ITERATOR(__last), __result, __alloc);
                                                                     ^
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = const double*; _Container = std::vector<double, std::allocator<double> >]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container> __it)
     ^~~~~~~~~~~~
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = double*; _Container = std::vector<double, std::allocator<double> >]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:43:
/usr/include/c++/6/bits/stl_construct.h: In static member function 'static void std::_Destroy_aux<true>::__destroy(_ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_construct.h:112:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __destroy(_ForwardIterator, _ForwardIterator) { }
         ^~~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:112:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
[ 22%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/App/SequenceApplicationTools.cpp.o
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:43:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/App/SequenceApplicationTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/App/SequenceApplicationTools.cpp
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __result));
                  ^
In file included from /usr/include/c++/6/vector:64:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:45:
/usr/include/c++/6/bits/stl_vector.h: In copy constructor 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:324:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
    std::__uninitialized_copy_a(__x.begin(), __x.end(),
    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
           this->_M_impl._M_start,
           ~~~~~~~~~~~~~~~~~~~~~~~
           _M_get_Tp_allocator());
           ~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:43:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
In file included from /usr/include/c++/6/vector:69:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:45:
/usr/include/c++/6/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/vector.tcc:195:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
          __x.end());
                   ^
/usr/include/c++/6/bits/vector.tcc:195:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::_Destroy(std::copy(__x.begin(), __x.end(), begin()),
        ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        end(), _M_get_Tp_allocator());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:8: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::_Destroy(std::copy(__x.begin(), __x.end(), begin()),
        ^~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:43:
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = std::move_iterator<double*>; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/stl_iterator.h: In function 'decltype (std::__miter_base(__it.base())) std::__miter_base(std::move_iterator<_IteratorL>) [with _Iterator = double*]':
/usr/include/c++/6/bits/stl_iterator.h:1243:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __miter_base(move_iterator<_Iterator> __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:45:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
In file included from /usr/include/c++/6/vector:64:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:45:
/usr/include/c++/6/bits/stl_vector.h: In member function 'std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(std::vector<_Tp, _Alloc>::size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:1219:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         _M_allocate_and_copy(size_type __n,
         ^~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_vector.h:1219:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_vector.h:1225:8: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::__uninitialized_copy_a(__first, __last, __result,
        ^~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __result));
                  ^
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:45:
/usr/include/c++/6/bits/stl_construct.h: In function 'void std::_Destroy(_ForwardIterator, _ForwardIterator, std::allocator<_T2>&) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >; _Tp = double]':
/usr/include/c++/6/bits/stl_construct.h:148:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     _Destroy(_ForwardIterator __first, _ForwardIterator __last,
     ^~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:148:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_construct.h:151:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
       _Destroy(__first, __last);
       ^~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:45:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:61:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/cpp_type_traits.h: In function '_Iterator std::__miter_base(_Iterator) [with _Iterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/cpp_type_traits.h:408:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __miter_base(_Iterator __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:45:
/usr/include/c++/6/bits/stl_construct.h: In function 'void std::_Destroy(_ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_construct.h:122:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     _Destroy(_ForwardIterator __first, _ForwardIterator __last)
     ^~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:122:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_construct.h:126:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
       std::_Destroy_aux<__has_trivial_destructor(_Value_type)>::
       ^~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:45:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_move_if_noexcept_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = double*; _ForwardIterator = double*; _Allocator = std::allocator<double>]':
/usr/include/c++/6/bits/stl_uninitialized.h:304:69: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
   _GLIBCXX_MAKE_MOVE_IF_NOEXCEPT_ITERATOR(__last), __result, __alloc);
                                                                     ^
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = const double*; _Container = std::vector<double, std::allocator<double> >]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container> __it)
     ^~~~~~~~~~~~
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = double*; _Container = std::vector<double, std::allocator<double> >]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:45:
/usr/include/c++/6/bits/stl_construct.h: In static member function 'static void std::_Destroy_aux<true>::__destroy(_ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_construct.h:112:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __destroy(_ForwardIterator, _ForwardIterator) { }
         ^~~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:112:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:45:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __result));
                  ^
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:45:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:45:
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = std::move_iterator<double*>; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/stl_iterator.h: In function 'decltype (std::__miter_base(__it.base())) std::__miter_base(std::move_iterator<_IteratorL>) [with _Iterator = double*]':
/usr/include/c++/6/bits/stl_iterator.h:1243:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __miter_base(move_iterator<_Iterator> __it)
     ^~~~~~~~~~~~
[ 22%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/CodonSiteTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/CodonSiteTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/CodonSiteTools.cpp
[ 22%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp
In file included from /usr/include/c++/6/vector:64:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex1.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex1Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex1Entry.cpp:40:
/usr/include/c++/6/bits/stl_vector.h: In copy constructor 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:324:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
    std::__uninitialized_copy_a(__x.begin(), __x.end(),
    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
           this->_M_impl._M_start,
           ~~~~~~~~~~~~~~~~~~~~~~~
           _M_get_Tp_allocator());
           ~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex1.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex1Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex1Entry.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:61:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex1.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex1Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex1Entry.cpp:40:
/usr/include/c++/6/bits/cpp_type_traits.h: In function '_Iterator std::__miter_base(_Iterator) [with _Iterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >]':
/usr/include/c++/6/bits/cpp_type_traits.h:408:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     __miter_base(_Iterator __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex1.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex1Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex1Entry.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex1.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex1Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex1Entry.cpp:40:
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = const double*; _Container = std::vector<double>]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     __niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container> __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex1.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex1Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex1Entry.cpp:40:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
         __result));
                  ^
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
[ 23%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp
In file included from /usr/include/c++/6/vector:64:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_vector.h: In copy constructor 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:324:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
    std::__uninitialized_copy_a(__x.begin(), __x.end(),
    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
           this->_M_impl._M_start,
           ~~~~~~~~~~~~~~~~~~~~~~~
           _M_get_Tp_allocator());
           ~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:69:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/vector.tcc:195:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
          __x.end());
                   ^
/usr/include/c++/6/bits/vector.tcc:195:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::_Destroy(std::copy(__x.begin(), __x.end(), begin()),
        ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        end(), _M_get_Tp_allocator());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:8: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::_Destroy(std::copy(__x.begin(), __x.end(), begin()),
        ^~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
In file included from /usr/include/c++/6/vector:64:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_vector.h: In member function 'std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(std::vector<_Tp, _Alloc>::size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:1219:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         _M_allocate_and_copy(size_type __n,
         ^~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_vector.h:1219:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_vector.h:1225:8: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::__uninitialized_copy_a(__first, __last, __result,
        ^~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __result));
                  ^
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_construct.h: In function 'void std::_Destroy(_ForwardIterator, _ForwardIterator, std::allocator<_T2>&) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >; _Tp = double]':
/usr/include/c++/6/bits/stl_construct.h:148:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     _Destroy(_ForwardIterator __first, _ForwardIterator __last,
     ^~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:148:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_construct.h:151:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
       _Destroy(__first, __last);
       ^~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:61:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/cpp_type_traits.h: In function '_Iterator std::__miter_base(_Iterator) [with _Iterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/cpp_type_traits.h:408:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __miter_base(_Iterator __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_construct.h: In function 'void std::_Destroy(_ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_construct.h:122:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     _Destroy(_ForwardIterator __first, _ForwardIterator __last)
     ^~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:122:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_construct.h:126:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
       std::_Destroy_aux<__has_trivial_destructor(_Value_type)>::
       ^~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_move_if_noexcept_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = double*; _ForwardIterator = double*; _Allocator = std::allocator<double>]':
/usr/include/c++/6/bits/stl_uninitialized.h:304:69: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
   _GLIBCXX_MAKE_MOVE_IF_NOEXCEPT_ITERATOR(__last), __result, __alloc);
                                                                     ^
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = const double*; _Container = std::vector<double, std::allocator<double> >]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container> __it)
     ^~~~~~~~~~~~
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = double*; _Container = std::vector<double, std::allocator<double> >]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_construct.h: In static member function 'static void std::_Destroy_aux<true>::__destroy(_ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_construct.h:112:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __destroy(_ForwardIterator, _ForwardIterator) { }
         ^~~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:112:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __result));
                  ^
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = std::move_iterator<double*>; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp:40:
/usr/include/c++/6/bits/stl_iterator.h: In function 'decltype (std::__miter_base(__it.base())) std::__miter_base(std::move_iterator<_IteratorL>) [with _Iterator = double*]':
/usr/include/c++/6/bits/stl_iterator.h:1243:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __miter_base(move_iterator<_Iterator> __it)
     ^~~~~~~~~~~~
[ 24%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/AbstractSequenceContainer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/AbstractSequenceContainer.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/AbstractSequenceContainer.cpp
In file included from /usr/include/c++/6/map:61:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolListTools.h:48,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/CodonSiteTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/CodonSiteTools.cpp:40:
/usr/include/c++/6/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = int; _Tp = double; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_map.h:502:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
    ^~~
In file included from /usr/include/c++/6/map:60:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolListTools.h:48,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/CodonSiteTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/CodonSiteTools.cpp:40:
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_tree.h:2193:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_tree.h:1928:5: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 24%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/AlignedSequenceContainer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/AlignedSequenceContainer.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/AlignedSequenceContainer.cpp
In file included from /usr/include/c++/6/map:61:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/App/../GeneticCode/../Alphabet/AbstractAlphabet.h:52,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/App/../GeneticCode/../Alphabet/WordAlphabet.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/App/../GeneticCode/../Alphabet/CodonAlphabet.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/App/../GeneticCode/GeneticCode.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/App/SequenceApplicationTools.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/App/SequenceApplicationTools.cpp:41:
/usr/include/c++/6/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = int; _Tp = double; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_map.h:502:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
    ^~~
/usr/include/c++/6/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = int; _Tp = double; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_map.h:483:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
    ^~~
In file included from /usr/include/c++/6/map:60:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/App/../GeneticCode/../Alphabet/AbstractAlphabet.h:52,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/App/../GeneticCode/../Alphabet/WordAlphabet.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/App/../GeneticCode/../Alphabet/CodonAlphabet.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/App/../GeneticCode/GeneticCode.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/App/SequenceApplicationTools.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/App/SequenceApplicationTools.cpp:41:
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_tree.h:2193:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const int&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_tree.h:2193:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
[ 25%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/CompressedVectorSiteContainer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/CompressedVectorSiteContainer.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/CompressedVectorSiteContainer.cpp
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_tree.h:1928:5: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:64:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_vector.h: In copy constructor 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:324:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
    std::__uninitialized_copy_a(__x.begin(), __x.end(),
    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
           this->_M_impl._M_start,
           ~~~~~~~~~~~~~~~~~~~~~~~
           _M_get_Tp_allocator());
           ~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:69:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/vector.tcc:195:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
          __x.end());
                   ^
/usr/include/c++/6/bits/vector.tcc:195:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::_Destroy(std::copy(__x.begin(), __x.end(), begin()),
        ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        end(), _M_get_Tp_allocator());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:8: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::_Destroy(std::copy(__x.begin(), __x.end(), begin()),
        ^~~
[ 25%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/MapSequenceContainer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/MapSequenceContainer.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/MapSequenceContainer.cpp
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
In file included from /usr/include/c++/6/vector:64:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_vector.h: In member function 'std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(std::vector<_Tp, _Alloc>::size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:1219:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         _M_allocate_and_copy(size_type __n,
         ^~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_vector.h:1219:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_vector.h:1225:8: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::__uninitialized_copy_a(__first, __last, __result,
        ^~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __result));
                  ^
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_construct.h: In function 'void std::_Destroy(_ForwardIterator, _ForwardIterator, std::allocator<_T2>&) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >; _Tp = double]':
/usr/include/c++/6/bits/stl_construct.h:148:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     _Destroy(_ForwardIterator __first, _ForwardIterator __last,
     ^~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:148:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_construct.h:151:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
       _Destroy(__first, __last);
       ^~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:61:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/cpp_type_traits.h: In function '_Iterator std::__miter_base(_Iterator) [with _Iterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/cpp_type_traits.h:408:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __miter_base(_Iterator __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_construct.h: In function 'void std::_Destroy(_ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_construct.h:122:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     _Destroy(_ForwardIterator __first, _ForwardIterator __last)
     ^~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:122:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_construct.h:126:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
       std::_Destroy_aux<__has_trivial_destructor(_Value_type)>::
       ^~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_move_if_noexcept_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = double*; _ForwardIterator = double*; _Allocator = std::allocator<double>]':
/usr/include/c++/6/bits/stl_uninitialized.h:304:69: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
   _GLIBCXX_MAKE_MOVE_IF_NOEXCEPT_ITERATOR(__last), __result, __alloc);
                                                                     ^
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = const double*; _Container = std::vector<double, std::allocator<double> >]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container> __it)
     ^~~~~~~~~~~~
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = double*; _Container = std::vector<double, std::allocator<double> >]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_construct.h: In static member function 'static void std::_Destroy_aux<true>::__destroy(_ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_construct.h:112:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __destroy(_ForwardIterator, _ForwardIterator) { }
         ^~~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:112:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __result));
                  ^
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = std::move_iterator<double*>; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp:41:
/usr/include/c++/6/bits/stl_iterator.h: In function 'decltype (std::__miter_base(__it.base())) std::__miter_base(std::move_iterator<_IteratorL>) [with _Iterator = double*]':
/usr/include/c++/6/bits/stl_iterator.h:1243:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __miter_base(move_iterator<_Iterator> __it)
     ^~~~~~~~~~~~
[ 26%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp
[ 27%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/SequenceContainerIterator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/SequenceContainerIterator.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SequenceContainerIterator.cpp
In file included from /usr/include/c++/6/vector:64:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_vector.h: In copy constructor 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:324:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
    std::__uninitialized_copy_a(__x.begin(), __x.end(),
    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
           this->_M_impl._M_start,
           ~~~~~~~~~~~~~~~~~~~~~~~
           _M_get_Tp_allocator());
           ~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:69:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/vector.tcc:195:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
          __x.end());
                   ^
/usr/include/c++/6/bits/vector.tcc:195:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::_Destroy(std::copy(__x.begin(), __x.end(), begin()),
        ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        end(), _M_get_Tp_allocator());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:8: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::_Destroy(std::copy(__x.begin(), __x.end(), begin()),
        ^~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
In file included from /usr/include/c++/6/vector:64:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_vector.h: In member function 'std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(std::vector<_Tp, _Alloc>::size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:1219:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         _M_allocate_and_copy(size_type __n,
         ^~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_vector.h:1219:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_vector.h:1225:8: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::__uninitialized_copy_a(__first, __last, __result,
        ^~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __result));
                  ^
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_construct.h: In function 'void std::_Destroy(_ForwardIterator, _ForwardIterator, std::allocator<_T2>&) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >; _Tp = double]':
/usr/include/c++/6/bits/stl_construct.h:148:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     _Destroy(_ForwardIterator __first, _ForwardIterator __last,
     ^~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:148:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_construct.h:151:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
       _Destroy(__first, __last);
       ^~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:61:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/cpp_type_traits.h: In function '_Iterator std::__miter_base(_Iterator) [with _Iterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/cpp_type_traits.h:408:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __miter_base(_Iterator __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_construct.h: In function 'void std::_Destroy(_ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_construct.h:122:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     _Destroy(_ForwardIterator __first, _ForwardIterator __last)
     ^~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:122:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_construct.h:126:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
       std::_Destroy_aux<__has_trivial_destructor(_Value_type)>::
       ^~~
[ 27%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/SequenceContainerTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/SequenceContainerTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SequenceContainerTools.cpp
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = const double*; _Container = std::vector<double, std::allocator<double> >]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container> __it)
     ^~~~~~~~~~~~
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = double*; _Container = std::vector<double, std::allocator<double> >]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_construct.h: In static member function 'static void std::_Destroy_aux<true>::__destroy(_ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_construct.h:112:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __destroy(_ForwardIterator, _ForwardIterator) { }
         ^~~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:112:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __result));
                  ^
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_move_if_noexcept_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = double*; _ForwardIterator = double*; _Allocator = std::allocator<double>]':
/usr/include/c++/6/bits/stl_uninitialized.h:304:69: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
   _GLIBCXX_MAKE_MOVE_IF_NOEXCEPT_ITERATOR(__last), __result, __alloc);
                                                                     ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = std::move_iterator<double*>; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp:40:
/usr/include/c++/6/bits/stl_iterator.h: In function 'decltype (std::__miter_base(__it.base())) std::__miter_base(std::move_iterator<_IteratorL>) [with _Iterator = double*]':
/usr/include/c++/6/bits/stl_iterator.h:1243:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __miter_base(move_iterator<_Iterator> __it)
     ^~~~~~~~~~~~
[ 27%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp
[ 28%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/SiteContainerExceptions.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/SiteContainerExceptions.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerExceptions.cpp
[ 28%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/SiteContainerIterator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/SiteContainerIterator.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerIterator.cpp
[ 29%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/SiteContainerTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/SiteContainerTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.cpp
In file included from /usr/include/c++/6/map:61:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SequenceContainerTools.h:47,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SequenceContainerTools.cpp:40:
/usr/include/c++/6/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = int; _Tp = double; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_map.h:483:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
    ^~~
In file included from /usr/include/c++/6/map:60:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SequenceContainerTools.h:47,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SequenceContainerTools.cpp:40:
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const int&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_tree.h:2193:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_tree.h:1928:5: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 30%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/VectorSequenceContainer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/VectorSequenceContainer.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/VectorSequenceContainer.cpp
In file included from /usr/include/c++/6/vector:64:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:43:
/usr/include/c++/6/bits/stl_vector.h: In copy constructor 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:324:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
    std::__uninitialized_copy_a(__x.begin(), __x.end(),
    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
           this->_M_impl._M_start,
           ~~~~~~~~~~~~~~~~~~~~~~~
           _M_get_Tp_allocator());
           ~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:69:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:43:
/usr/include/c++/6/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/vector.tcc:195:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
          __x.end());
                   ^
/usr/include/c++/6/bits/vector.tcc:195:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::_Destroy(std::copy(__x.begin(), __x.end(), begin()),
        ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        end(), _M_get_Tp_allocator());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:8: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::_Destroy(std::copy(__x.begin(), __x.end(), begin()),
        ^~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:43:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
In file included from /usr/include/c++/6/vector:64:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:43:
/usr/include/c++/6/bits/stl_vector.h: In member function 'std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(std::vector<_Tp, _Alloc>::size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:1219:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         _M_allocate_and_copy(size_type __n,
         ^~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_vector.h:1219:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_vector.h:1225:8: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::__uninitialized_copy_a(__first, __last, __result,
        ^~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __result));
                  ^
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:43:
/usr/include/c++/6/bits/stl_construct.h: In function 'void std::_Destroy(_ForwardIterator, _ForwardIterator, std::allocator<_T2>&) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >; _Tp = double]':
/usr/include/c++/6/bits/stl_construct.h:148:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     _Destroy(_ForwardIterator __first, _ForwardIterator __last,
     ^~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:148:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_construct.h:151:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
       _Destroy(__first, __last);
       ^~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:43:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:61:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/cpp_type_traits.h: In function '_Iterator std::__miter_base(_Iterator) [with _Iterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/cpp_type_traits.h:408:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __miter_base(_Iterator __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:43:
/usr/include/c++/6/bits/stl_construct.h: In function 'void std::_Destroy(_ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_construct.h:122:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     _Destroy(_ForwardIterator __first, _ForwardIterator __last)
     ^~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:122:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_construct.h:126:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
       std::_Destroy_aux<__has_trivial_destructor(_Value_type)>::
       ^~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:43:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_move_if_noexcept_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = double*; _ForwardIterator = double*; _Allocator = std::allocator<double>]':
/usr/include/c++/6/bits/stl_uninitialized.h:304:69: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
   _GLIBCXX_MAKE_MOVE_IF_NOEXCEPT_ITERATOR(__last), __result, __alloc);
                                                                     ^
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = const double*; _Container = std::vector<double, std::allocator<double> >]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container> __it)
     ^~~~~~~~~~~~
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = double*; _Container = std::vector<double, std::allocator<double> >]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:43:
/usr/include/c++/6/bits/stl_construct.h: In static member function 'static void std::_Destroy_aux<true>::__destroy(_ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_construct.h:112:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __destroy(_ForwardIterator, _ForwardIterator) { }
         ^~~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:112:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:43:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __result));
                  ^
[ 30%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/VectorSiteContainer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/VectorSiteContainer.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/VectorSiteContainer.cpp
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:43:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:43:
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = std::move_iterator<double*>; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/stl_iterator.h: In function 'decltype (std::__miter_base(__it.base())) std::__miter_base(std::move_iterator<_IteratorL>) [with _Iterator = double*]':
/usr/include/c++/6/bits/stl_iterator.h:1243:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __miter_base(move_iterator<_Iterator> __it)
     ^~~~~~~~~~~~
[ 31%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp
[ 32%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/DNAToRNA.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/DNAToRNA.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/DNAToRNA.cpp
In file included from /usr/include/c++/6/map:61:0,
                 from /usr/include/Bpp/Numeric/AbstractParametrizable.h:47,
                 from /usr/include/Bpp/Numeric/Function/Functions.h:45,
                 from /usr/include/Bpp/Numeric/NumTools.h:43,
                 from /usr/include/Bpp/Numeric/VectorTools.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainer.h:47,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.cpp:41:
/usr/include/c++/6/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = int; _Tp = double; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_map.h:502:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
    ^~~
In file included from /usr/include/c++/6/map:60:0,
                 from /usr/include/Bpp/Numeric/AbstractParametrizable.h:47,
                 from /usr/include/Bpp/Numeric/Function/Functions.h:45,
                 from /usr/include/Bpp/Numeric/NumTools.h:43,
                 from /usr/include/Bpp/Numeric/VectorTools.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainer.h:47,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.cpp:41:
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_tree.h:2193:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../SymbolList.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Site.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainer.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.cpp:41:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_move_if_noexcept_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = double*; _ForwardIterator = double*; _Allocator = std::allocator<double>]':
/usr/include/c++/6/bits/stl_uninitialized.h:304:69: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
   _GLIBCXX_MAKE_MOVE_IF_NOEXCEPT_ITERATOR(__last), __result, __alloc);
                                                                     ^
In file included from /usr/include/c++/6/map:60:0,
                 from /usr/include/Bpp/Numeric/AbstractParametrizable.h:47,
                 from /usr/include/Bpp/Numeric/Function/Functions.h:45,
                 from /usr/include/Bpp/Numeric/NumTools.h:43,
                 from /usr/include/Bpp/Numeric/VectorTools.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainer.h:47,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.cpp:41:
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_tree.h:1928:5: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../SymbolList.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Site.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainer.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.cpp:41:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/vector:64:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../SymbolList.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Site.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainer.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.cpp:41:
/usr/include/c++/6/bits/stl_vector.h: In copy constructor 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:324:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
    std::__uninitialized_copy_a(__x.begin(), __x.end(),
    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
           this->_M_impl._M_start,
           ~~~~~~~~~~~~~~~~~~~~~~~
           _M_get_Tp_allocator());
           ~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../SymbolList.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Site.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainer.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = std::move_iterator<double*>; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../SymbolList.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Site.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainer.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.cpp:41:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../SymbolList.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Site.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainer.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.cpp:41:
/usr/include/c++/6/bits/stl_iterator.h: In function 'decltype (std::__miter_base(__it.base())) std::__miter_base(std::move_iterator<_IteratorL>) [with _Iterator = double*]':
/usr/include/c++/6/bits/stl_iterator.h:1243:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __miter_base(move_iterator<_Iterator> __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../SymbolList.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Site.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainer.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.cpp:41:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../SymbolList.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Site.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainer.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __result));
                  ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:61:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../SymbolList.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Site.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainer.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.cpp:41:
/usr/include/c++/6/bits/cpp_type_traits.h: In function '_Iterator std::__miter_base(_Iterator) [with _Iterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/cpp_type_traits.h:408:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __miter_base(_Iterator __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../SymbolList.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Site.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainer.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../SymbolList.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Site.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainer.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.cpp:41:
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = const double*; _Container = std::vector<double, std::allocator<double> >]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container> __it)
     ^~~~~~~~~~~~
[ 32%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/DistanceMatrix.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/DistanceMatrix.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/DistanceMatrix.cpp
In file included from /usr/include/c++/6/vector:64:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:45:
/usr/include/c++/6/bits/stl_vector.h: In copy constructor 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:324:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
    std::__uninitialized_copy_a(__x.begin(), __x.end(),
    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
           this->_M_impl._M_start,
           ~~~~~~~~~~~~~~~~~~~~~~~
           _M_get_Tp_allocator());
           ~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:69:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:45:
/usr/include/c++/6/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/vector.tcc:195:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
          __x.end());
                   ^
/usr/include/c++/6/bits/vector.tcc:195:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::_Destroy(std::copy(__x.begin(), __x.end(), begin()),
        ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        end(), _M_get_Tp_allocator());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:8: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::_Destroy(std::copy(__x.begin(), __x.end(), begin()),
        ^~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:45:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
In file included from /usr/include/c++/6/vector:64:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:45:
/usr/include/c++/6/bits/stl_vector.h: In member function 'std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(std::vector<_Tp, _Alloc>::size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:1219:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         _M_allocate_and_copy(size_type __n,
         ^~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_vector.h:1219:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_vector.h:1225:8: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::__uninitialized_copy_a(__first, __last, __result,
        ^~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __result));
                  ^
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:45:
/usr/include/c++/6/bits/stl_construct.h: In function 'void std::_Destroy(_ForwardIterator, _ForwardIterator, std::allocator<_T2>&) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >; _Tp = double]':
/usr/include/c++/6/bits/stl_construct.h:148:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     _Destroy(_ForwardIterator __first, _ForwardIterator __last,
     ^~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:148:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_construct.h:151:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
       _Destroy(__first, __last);
       ^~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:45:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:61:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/cpp_type_traits.h: In function '_Iterator std::__miter_base(_Iterator) [with _Iterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/cpp_type_traits.h:408:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __miter_base(_Iterator __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:45:
/usr/include/c++/6/bits/stl_construct.h: In function 'void std::_Destroy(_ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_construct.h:122:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     _Destroy(_ForwardIterator __first, _ForwardIterator __last)
     ^~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:122:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_construct.h:126:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
       std::_Destroy_aux<__has_trivial_destructor(_Value_type)>::
       ^~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:45:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_move_if_noexcept_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = double*; _ForwardIterator = double*; _Allocator = std::allocator<double>]':
/usr/include/c++/6/bits/stl_uninitialized.h:304:69: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
   _GLIBCXX_MAKE_MOVE_IF_NOEXCEPT_ITERATOR(__last), __result, __alloc);
                                                                     ^
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = const double*; _Container = std::vector<double, std::allocator<double> >]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container> __it)
     ^~~~~~~~~~~~
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = double*; _Container = std::vector<double, std::allocator<double> >]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:45:
/usr/include/c++/6/bits/stl_construct.h: In static member function 'static void std::_Destroy_aux<true>::__destroy(_ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_construct.h:112:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __destroy(_ForwardIterator, _ForwardIterator) { }
         ^~~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:112:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
[ 33%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/GeneticCode/AscidianMitochondrialGeneticCode.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/GeneticCode/AscidianMitochondrialGeneticCode.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/GeneticCode/AscidianMitochondrialGeneticCode.cpp
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:45:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __result));
                  ^
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:45:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:45:
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = std::move_iterator<double*>; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp:41:
/usr/include/c++/6/bits/stl_iterator.h: In function 'decltype (std::__miter_base(__it.base())) std::__miter_base(std::move_iterator<_IteratorL>) [with _Iterator = double*]':
/usr/include/c++/6/bits/stl_iterator.h:1243:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __miter_base(move_iterator<_Iterator> __it)
     ^~~~~~~~~~~~
[ 33%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/AlphabetIndex/SimpleScore.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/AlphabetIndex/SimpleScore.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp
[ 33%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/GeneticCode/EchinodermMitochondrialGeneticCode.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/GeneticCode/EchinodermMitochondrialGeneticCode.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/GeneticCode/EchinodermMitochondrialGeneticCode.cpp
[ 34%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/GeneticCode/GeneticCode.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/GeneticCode/GeneticCode.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/GeneticCode/GeneticCode.cpp
In file included from /usr/include/c++/6/vector:64:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:45:
/usr/include/c++/6/bits/stl_vector.h: In copy constructor 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:324:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
    std::__uninitialized_copy_a(__x.begin(), __x.end(),
    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
           this->_M_impl._M_start,
           ~~~~~~~~~~~~~~~~~~~~~~~
           _M_get_Tp_allocator());
           ~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:69:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:45:
/usr/include/c++/6/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/vector.tcc:195:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
          __x.end());
                   ^
/usr/include/c++/6/bits/vector.tcc:195:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::_Destroy(std::copy(__x.begin(), __x.end(), begin()),
        ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        end(), _M_get_Tp_allocator());
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/vector.tcc:206:8: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::_Destroy(std::copy(__x.begin(), __x.end(), begin()),
        ^~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:45:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
In file included from /usr/include/c++/6/vector:64:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:45:
/usr/include/c++/6/bits/stl_vector.h: In member function 'std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(std::vector<_Tp, _Alloc>::size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:1219:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         _M_allocate_and_copy(size_type __n,
         ^~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_vector.h:1219:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_vector.h:1225:8: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
        std::__uninitialized_copy_a(__first, __last, __result,
        ^~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __result));
                  ^
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:45:
/usr/include/c++/6/bits/stl_construct.h: In function 'void std::_Destroy(_ForwardIterator, _ForwardIterator, std::allocator<_T2>&) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >; _Tp = double]':
/usr/include/c++/6/bits/stl_construct.h:148:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     _Destroy(_ForwardIterator __first, _ForwardIterator __last,
     ^~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:148:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_construct.h:151:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
       _Destroy(__first, __last);
       ^~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:45:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:61:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:41:
/usr/include/c++/6/bits/cpp_type_traits.h: In function '_Iterator std::__miter_base(_Iterator) [with _Iterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/cpp_type_traits.h:408:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __miter_base(_Iterator __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:45:
/usr/include/c++/6/bits/stl_construct.h: In function 'void std::_Destroy(_ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_construct.h:122:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     _Destroy(_ForwardIterator __first, _ForwardIterator __last)
     ^~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:122:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_construct.h:126:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
       std::_Destroy_aux<__has_trivial_destructor(_Value_type)>::
       ^~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:45:
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:41:
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = const double*; _Container = std::vector<double, std::allocator<double> >]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container> __it)
     ^~~~~~~~~~~~
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = double*; _Container = std::vector<double, std::allocator<double> >]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:62:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:45:
/usr/include/c++/6/bits/stl_construct.h: In static member function 'static void std::_Destroy_aux<true>::__destroy(_ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/stl_construct.h:112:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __destroy(_ForwardIterator, _ForwardIterator) { }
         ^~~~~~~~~
/usr/include/c++/6/bits/stl_construct.h:112:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __result));
                  ^
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:45:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_move_if_noexcept_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = double*; _ForwardIterator = double*; _Allocator = std::allocator<double>]':
/usr/include/c++/6/bits/stl_uninitialized.h:304:69: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
   _GLIBCXX_MAKE_MOVE_IF_NOEXCEPT_ITERATOR(__last), __result, __alloc);
                                                                     ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.h:46,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:45:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = std::move_iterator<double*>; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/AlphabetIndex/SimpleScore.cpp:41:
/usr/include/c++/6/bits/stl_iterator.h: In function 'decltype (std::__miter_base(__it.base())) std::__miter_base(std::move_iterator<_IteratorL>) [with _Iterator = double*]':
/usr/include/c++/6/bits/stl_iterator.h:1243:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __miter_base(move_iterator<_Iterator> __it)
     ^~~~~~~~~~~~
[ 35%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/App/SequenceApplicationTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/App/SequenceApplicationTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/App/SequenceApplicationTools.cpp
[ 35%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/GeneticCode/InvertebrateMitochondrialGeneticCode.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/GeneticCode/InvertebrateMitochondrialGeneticCode.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/GeneticCode/InvertebrateMitochondrialGeneticCode.cpp
[ 36%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/GeneticCode/MoldMitochondrialGeneticCode.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/GeneticCode/MoldMitochondrialGeneticCode.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/GeneticCode/MoldMitochondrialGeneticCode.cpp
[ 36%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/GeneticCode/StandardGeneticCode.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/GeneticCode/StandardGeneticCode.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/GeneticCode/StandardGeneticCode.cpp
[ 37%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/GeneticCode/VertebrateMitochondrialGeneticCode.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/GeneticCode/VertebrateMitochondrialGeneticCode.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/GeneticCode/VertebrateMitochondrialGeneticCode.cpp
[ 37%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/CodonSiteTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/CodonSiteTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/CodonSiteTools.cpp
In file included from /usr/include/c++/6/map:61:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/App/../GeneticCode/../Alphabet/AbstractAlphabet.h:52,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/App/../GeneticCode/../Alphabet/WordAlphabet.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/App/../GeneticCode/../Alphabet/CodonAlphabet.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/App/../GeneticCode/GeneticCode.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/App/SequenceApplicationTools.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/App/SequenceApplicationTools.cpp:41:
/usr/include/c++/6/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = int; _Tp = double; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_map.h:502:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
    ^~~
/usr/include/c++/6/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = int; _Tp = double; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_map.h:483:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
    ^~~
In file included from /usr/include/c++/6/map:60:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/App/../GeneticCode/../Alphabet/AbstractAlphabet.h:52,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/App/../GeneticCode/../Alphabet/WordAlphabet.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/App/../GeneticCode/../Alphabet/CodonAlphabet.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/App/../GeneticCode/GeneticCode.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/App/SequenceApplicationTools.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/App/SequenceApplicationTools.cpp:41:
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_tree.h:2193:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const int&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_tree.h:2193:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_tree.h:1928:5: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 38%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/GeneticCode/YeastMitochondrialGeneticCode.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/GeneticCode/YeastMitochondrialGeneticCode.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/GeneticCode/YeastMitochondrialGeneticCode.cpp
[ 39%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/AbstractSequenceContainer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/AbstractSequenceContainer.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/AbstractSequenceContainer.cpp
[ 39%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/BppOAlignmentReaderFormat.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/BppOAlignmentReaderFormat.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlignmentReaderFormat.cpp
[ 39%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/AlignedSequenceContainer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/AlignedSequenceContainer.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/AlignedSequenceContainer.cpp
In file included from /usr/include/c++/6/map:61:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolListTools.h:48,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/CodonSiteTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/CodonSiteTools.cpp:40:
/usr/include/c++/6/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = int; _Tp = double; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_map.h:502:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
    ^~~
In file included from /usr/include/c++/6/map:60:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolListTools.h:48,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/CodonSiteTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/CodonSiteTools.cpp:40:
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_tree.h:2193:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_tree.h:1928:5: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 40%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/CompressedVectorSiteContainer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/CompressedVectorSiteContainer.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/CompressedVectorSiteContainer.cpp
[ 41%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/BppOAlignmentWriterFormat.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/BppOAlignmentWriterFormat.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlignmentWriterFormat.cpp
[ 41%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/BppOAlphabetIndex1Format.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/BppOAlphabetIndex1Format.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.cpp
[ 41%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/MapSequenceContainer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/MapSequenceContainer.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/MapSequenceContainer.cpp
[ 42%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/BppOAlphabetIndex2Format.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/BppOAlphabetIndex2Format.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.cpp
[ 43%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/SequenceContainerIterator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/SequenceContainerIterator.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SequenceContainerIterator.cpp
In file included from /usr/include/c++/6/vector:64:0,
                 from /usr/include/Bpp/Exceptions.h:46,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.cpp:40:
/usr/include/c++/6/bits/stl_vector.h: In copy constructor 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:324:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
    std::__uninitialized_copy_a(__x.begin(), __x.end(),
    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
           this->_M_impl._M_start,
           ~~~~~~~~~~~~~~~~~~~~~~~
           _M_get_Tp_allocator());
           ~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /usr/include/Bpp/Exceptions.h:46,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_move_if_noexcept_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = double*; _ForwardIterator = double*; _Allocator = std::allocator<double>]':
/usr/include/c++/6/bits/stl_uninitialized.h:304:69: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
   _GLIBCXX_MAKE_MOVE_IF_NOEXCEPT_ITERATOR(__last), __result, __alloc);
                                                                     ^
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:61:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /usr/include/c++/6/stdexcept:39,
                 from /usr/include/Bpp/Exceptions.h:45,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.cpp:40:
/usr/include/c++/6/bits/cpp_type_traits.h: In function '_Iterator std::__miter_base(_Iterator) [with _Iterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >]':
/usr/include/c++/6/bits/cpp_type_traits.h:408:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     __miter_base(_Iterator __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /usr/include/Bpp/Exceptions.h:46,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /usr/include/c++/6/stdexcept:39,
                 from /usr/include/Bpp/Exceptions.h:45,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.cpp:40:
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = const double*; _Container = std::vector<double>]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     __niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container> __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /usr/include/Bpp/Exceptions.h:46,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /usr/include/c++/6/stdexcept:39,
                 from /usr/include/Bpp/Exceptions.h:45,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.cpp:40:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
         __result));
                  ^
In file included from /usr/include/c++/6/vector:63:0,
                 from /usr/include/Bpp/Exceptions.h:46,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /usr/include/c++/6/stdexcept:39,
                 from /usr/include/Bpp/Exceptions.h:45,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.cpp:40:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = std::move_iterator<double*>; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /usr/include/c++/6/stdexcept:39,
                 from /usr/include/Bpp/Exceptions.h:45,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.cpp:40:
/usr/include/c++/6/bits/stl_iterator.h: In function 'decltype (std::__miter_base(__it.base())) std::__miter_base(std::move_iterator<_IteratorL>) [with _Iterator = double*]':
/usr/include/c++/6/bits/stl_iterator.h:1243:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __miter_base(move_iterator<_Iterator> __it)
     ^~~~~~~~~~~~
[ 43%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/BppOSequenceReaderFormat.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/BppOSequenceReaderFormat.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOSequenceReaderFormat.cpp
[ 44%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/BppOSequenceStreamReaderFormat.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/BppOSequenceStreamReaderFormat.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOSequenceStreamReaderFormat.cpp
[ 45%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/SequenceContainerTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/SequenceContainerTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SequenceContainerTools.cpp
In file included from /usr/include/c++/6/vector:64:0,
                 from /usr/include/Bpp/Exceptions.h:46,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.cpp:40:
/usr/include/c++/6/bits/stl_vector.h: In copy constructor 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:324:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
    std::__uninitialized_copy_a(__x.begin(), __x.end(),
    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
           this->_M_impl._M_start,
           ~~~~~~~~~~~~~~~~~~~~~~~
           _M_get_Tp_allocator());
           ~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /usr/include/Bpp/Exceptions.h:46,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_move_if_noexcept_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = double*; _ForwardIterator = double*; _Allocator = std::allocator<double>]':
/usr/include/c++/6/bits/stl_uninitialized.h:304:69: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
   _GLIBCXX_MAKE_MOVE_IF_NOEXCEPT_ITERATOR(__last), __result, __alloc);
                                                                     ^
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:61:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /usr/include/c++/6/stdexcept:39,
                 from /usr/include/Bpp/Exceptions.h:45,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.cpp:40:
/usr/include/c++/6/bits/cpp_type_traits.h: In function '_Iterator std::__miter_base(_Iterator) [with _Iterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >]':
/usr/include/c++/6/bits/cpp_type_traits.h:408:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     __miter_base(_Iterator __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /usr/include/Bpp/Exceptions.h:46,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /usr/include/c++/6/stdexcept:39,
                 from /usr/include/Bpp/Exceptions.h:45,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.cpp:40:
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = const double*; _Container = std::vector<double>]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     __niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container> __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /usr/include/Bpp/Exceptions.h:46,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /usr/include/c++/6/stdexcept:39,
                 from /usr/include/Bpp/Exceptions.h:45,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.cpp:40:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
         __result));
                  ^
In file included from /usr/include/c++/6/vector:63:0,
                 from /usr/include/Bpp/Exceptions.h:46,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /usr/include/c++/6/stdexcept:39,
                 from /usr/include/Bpp/Exceptions.h:45,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.cpp:40:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = std::move_iterator<double*>; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /usr/include/c++/6/stdexcept:39,
                 from /usr/include/Bpp/Exceptions.h:45,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.cpp:40:
/usr/include/c++/6/bits/stl_iterator.h: In function 'decltype (std::__miter_base(__it.base())) std::__miter_base(std::move_iterator<_IteratorL>) [with _Iterator = double*]':
/usr/include/c++/6/bits/stl_iterator.h:1243:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __miter_base(move_iterator<_Iterator> __it)
     ^~~~~~~~~~~~
[ 45%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/BppOSequenceWriterFormat.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/BppOSequenceWriterFormat.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOSequenceWriterFormat.cpp
[ 46%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/Clustal.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/Clustal.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/Clustal.cpp
[ 46%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/SiteContainerExceptions.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/SiteContainerExceptions.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerExceptions.cpp
In file included from /usr/include/c++/6/map:61:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SequenceContainerTools.h:47,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SequenceContainerTools.cpp:40:
/usr/include/c++/6/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = int; _Tp = double; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_map.h:483:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
    ^~~
In file included from /usr/include/c++/6/map:60:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SequenceContainerTools.h:47,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SequenceContainerTools.cpp:40:
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const int&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_tree.h:2193:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_tree.h:1928:5: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 47%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/SiteContainerIterator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/SiteContainerIterator.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerIterator.cpp
[ 47%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/Dcse.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/Dcse.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/Dcse.cpp
[ 48%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/Fasta.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/Fasta.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/Fasta.cpp
[ 48%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/GenBank.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/GenBank.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/GenBank.cpp
[ 48%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/SiteContainerTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/SiteContainerTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.cpp
[ 49%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/VectorSequenceContainer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/VectorSequenceContainer.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/VectorSequenceContainer.cpp
[ 50%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/IoSequenceFactory.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/IoSequenceFactory.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/IoSequenceFactory.cpp
[ 50%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/VectorSiteContainer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/VectorSiteContainer.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/VectorSiteContainer.cpp
[ 51%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/Mase.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/Mase.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/Mase.cpp
In file included from /usr/include/c++/6/map:61:0,
                 from /usr/include/Bpp/Numeric/AbstractParametrizable.h:47,
                 from /usr/include/Bpp/Numeric/Function/Functions.h:45,
                 from /usr/include/Bpp/Numeric/NumTools.h:43,
                 from /usr/include/Bpp/Numeric/VectorTools.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainer.h:47,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.cpp:41:
/usr/include/c++/6/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = int; _Tp = double; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_map.h:502:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
    ^~~
In file included from /usr/include/c++/6/map:60:0,
                 from /usr/include/Bpp/Numeric/AbstractParametrizable.h:47,
                 from /usr/include/Bpp/Numeric/Function/Functions.h:45,
                 from /usr/include/Bpp/Numeric/NumTools.h:43,
                 from /usr/include/Bpp/Numeric/VectorTools.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainer.h:47,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.cpp:41:
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_tree.h:2193:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../SymbolList.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Site.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainer.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.cpp:41:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_move_if_noexcept_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = double*; _ForwardIterator = double*; _Allocator = std::allocator<double>]':
/usr/include/c++/6/bits/stl_uninitialized.h:304:69: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
   _GLIBCXX_MAKE_MOVE_IF_NOEXCEPT_ITERATOR(__last), __result, __alloc);
                                                                     ^
In file included from /usr/include/c++/6/map:60:0,
                 from /usr/include/Bpp/Numeric/AbstractParametrizable.h:47,
                 from /usr/include/Bpp/Numeric/Function/Functions.h:45,
                 from /usr/include/Bpp/Numeric/NumTools.h:43,
                 from /usr/include/Bpp/Numeric/VectorTools.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainer.h:47,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.cpp:41:
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_tree.h:1928:5: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../SymbolList.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Site.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainer.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.cpp:41:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
[ 51%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/MaseTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/MaseTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/MaseTools.cpp
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/vector:64:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../SymbolList.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Site.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainer.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.cpp:41:
/usr/include/c++/6/bits/stl_vector.h: In copy constructor 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:324:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
    std::__uninitialized_copy_a(__x.begin(), __x.end(),
    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
           this->_M_impl._M_start,
           ~~~~~~~~~~~~~~~~~~~~~~~
           _M_get_Tp_allocator());
           ~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../SymbolList.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Site.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainer.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = std::move_iterator<double*>; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../SymbolList.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Site.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainer.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.cpp:41:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../SymbolList.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Site.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainer.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.cpp:41:
/usr/include/c++/6/bits/stl_iterator.h: In function 'decltype (std::__miter_base(__it.base())) std::__miter_base(std::move_iterator<_IteratorL>) [with _Iterator = double*]':
/usr/include/c++/6/bits/stl_iterator.h:1243:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __miter_base(move_iterator<_Iterator> __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../SymbolList.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Site.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainer.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.cpp:41:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../SymbolList.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Site.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainer.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __result));
                  ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:61:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../SymbolList.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Site.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainer.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.cpp:41:
/usr/include/c++/6/bits/cpp_type_traits.h: In function '_Iterator std::__miter_base(_Iterator) [with _Iterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/cpp_type_traits.h:408:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __miter_base(_Iterator __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../SymbolList.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Site.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainer.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../SymbolList.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/../Site.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainer.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Container/SiteContainerTools.cpp:41:
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = const double*; _Container = std::vector<double, std::allocator<double> >]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container> __it)
     ^~~~~~~~~~~~
[ 52%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/DNAToRNA.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/DNAToRNA.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/DNAToRNA.cpp
[ 52%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/DistanceMatrix.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/DistanceMatrix.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/DistanceMatrix.cpp
[ 53%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/NexusIoSequence.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/NexusIoSequence.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/NexusIoSequence.cpp
[ 53%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/NexusTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/NexusTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/NexusTools.cpp
[ 54%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/PhredPhd.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/PhredPhd.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/PhredPhd.cpp
[ 55%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/GeneticCode/AscidianMitochondrialGeneticCode.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/GeneticCode/AscidianMitochondrialGeneticCode.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/GeneticCode/AscidianMitochondrialGeneticCode.cpp
[ 55%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/PhredPoly.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/PhredPoly.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/PhredPoly.cpp
[ 56%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/Phylip.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/Phylip.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/Phylip.cpp
[ 56%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/Stockholm.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/Stockholm.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/Stockholm.cpp
[ 56%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/GeneticCode/EchinodermMitochondrialGeneticCode.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/GeneticCode/EchinodermMitochondrialGeneticCode.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/GeneticCode/EchinodermMitochondrialGeneticCode.cpp
[ 57%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/StreamSequenceIterator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/StreamSequenceIterator.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/StreamSequenceIterator.cpp
[ 58%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/NucleicAcidsReplication.cpp.o
[ 58%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/GeneticCode/GeneticCode.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/NucleicAcidsReplication.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/NucleicAcidsReplication.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/GeneticCode/GeneticCode.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/GeneticCode/GeneticCode.cpp
[ 59%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/GeneticCode/InvertebrateMitochondrialGeneticCode.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/GeneticCode/InvertebrateMitochondrialGeneticCode.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/GeneticCode/InvertebrateMitochondrialGeneticCode.cpp
[ 60%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Sequence.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Sequence.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Sequence.cpp
[ 61%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SequenceExceptions.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SequenceExceptions.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceExceptions.cpp
[ 61%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SequencePositionIterators.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SequencePositionIterators.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/SequencePositionIterators.cpp
[ 62%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SequenceTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SequenceTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.cpp
[ 62%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/GeneticCode/MoldMitochondrialGeneticCode.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/GeneticCode/MoldMitochondrialGeneticCode.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/GeneticCode/MoldMitochondrialGeneticCode.cpp
[ 62%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SequenceWalker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SequenceWalker.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceWalker.cpp
[ 63%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SequenceWithAnnotation.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SequenceWithAnnotation.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceWithAnnotation.cpp
[ 64%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/GeneticCode/StandardGeneticCode.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/GeneticCode/StandardGeneticCode.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/GeneticCode/StandardGeneticCode.cpp
[ 64%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SequenceWithAnnotationTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SequenceWithAnnotationTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceWithAnnotationTools.cpp
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.cpp:42:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_move_if_noexcept_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = double*; _ForwardIterator = double*; _Allocator = std::allocator<double>]':
/usr/include/c++/6/bits/stl_uninitialized.h:304:69: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
   _GLIBCXX_MAKE_MOVE_IF_NOEXCEPT_ITERATOR(__last), __result, __alloc);
                                                                     ^
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.cpp:42:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = std::move_iterator<double*>; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.cpp:42:
/usr/include/c++/6/bits/stl_iterator.h: In function 'decltype (std::__miter_base(__it.base())) std::__miter_base(std::move_iterator<_IteratorL>) [with _Iterator = double*]':
/usr/include/c++/6/bits/stl_iterator.h:1243:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __miter_base(move_iterator<_Iterator> __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:64:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.cpp:42:
/usr/include/c++/6/bits/stl_vector.h: In copy constructor 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:324:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
    std::__uninitialized_copy_a(__x.begin(), __x.end(),
    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
           this->_M_impl._M_start,
           ~~~~~~~~~~~~~~~~~~~~~~~
           _M_get_Tp_allocator());
           ~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.cpp:42:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.cpp:42:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __result));
                  ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:61:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.cpp:42:
/usr/include/c++/6/bits/cpp_type_traits.h: In function '_Iterator std::__miter_base(_Iterator) [with _Iterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/cpp_type_traits.h:408:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __miter_base(_Iterator __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.cpp:42:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.cpp:42:
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = const double*; _Container = std::vector<double, std::allocator<double> >]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container> __it)
     ^~~~~~~~~~~~
[ 65%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SequenceWithQuality.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SequenceWithQuality.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceWithQuality.cpp
[ 65%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/GeneticCode/VertebrateMitochondrialGeneticCode.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/GeneticCode/VertebrateMitochondrialGeneticCode.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/GeneticCode/VertebrateMitochondrialGeneticCode.cpp
[ 66%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/GeneticCode/YeastMitochondrialGeneticCode.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/GeneticCode/YeastMitochondrialGeneticCode.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/GeneticCode/YeastMitochondrialGeneticCode.cpp
[ 66%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/BppOAlignmentReaderFormat.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/BppOAlignmentReaderFormat.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlignmentReaderFormat.cpp
[ 66%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SequenceWithQualityTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SequenceWithQualityTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceWithQualityTools.cpp
[ 67%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/BppOAlignmentWriterFormat.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/BppOAlignmentWriterFormat.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlignmentWriterFormat.cpp
[ 68%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Site.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Site.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Site.cpp
[ 68%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SiteExceptions.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SiteExceptions.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteExceptions.cpp
[ 69%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SiteTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SiteTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteTools.cpp
[ 70%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/StringSequenceTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/StringSequenceTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/StringSequenceTools.cpp
[ 70%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/BppOAlphabetIndex1Format.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/BppOAlphabetIndex1Format.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.cpp
[ 70%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SymbolList.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SymbolList.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolList.cpp
In file included from /usr/include/c++/6/map:61:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolListTools.h:48,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteTools.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteTools.cpp:41:
/usr/include/c++/6/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = int; _Tp = double; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_map.h:483:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
    ^~~
/usr/include/c++/6/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = int; _Tp = double; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_map.h:502:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
    ^~~
In file included from /usr/include/c++/6/map:60:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolListTools.h:48,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteTools.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteTools.cpp:41:
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const int&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_tree.h:2193:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_tree.h:2193:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolList.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolListTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteTools.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteTools.cpp:41:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_move_if_noexcept_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = double*; _ForwardIterator = double*; _Allocator = std::allocator<double>]':
/usr/include/c++/6/bits/stl_uninitialized.h:304:69: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
   _GLIBCXX_MAKE_MOVE_IF_NOEXCEPT_ITERATOR(__last), __result, __alloc);
                                                                     ^
In file included from /usr/include/c++/6/map:60:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolListTools.h:48,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteTools.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteTools.cpp:41:
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_tree.h:1928:5: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolList.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolListTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteTools.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteTools.cpp:41:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolList.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolListTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteTools.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteTools.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = std::move_iterator<double*>; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolList.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolListTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteTools.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteTools.cpp:41:
/usr/include/c++/6/bits/stl_iterator.h: In function 'decltype (std::__miter_base(__it.base())) std::__miter_base(std::move_iterator<_IteratorL>) [with _Iterator = double*]':
/usr/include/c++/6/bits/stl_iterator.h:1243:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __miter_base(move_iterator<_Iterator> __it)
     ^~~~~~~~~~~~
[ 71%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SymbolListTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SymbolListTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolListTools.cpp
In file included from /usr/include/c++/6/map:61:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/AbstractAlphabet.h:52,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/LetterAlphabet.h:49,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/NucleicAlphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/DNA.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/AlphabetTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/StringSequenceTools.cpp:42:
/usr/include/c++/6/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = char; _Tp = double; _Compare = std::less<char>; _Alloc = std::allocator<std::pair<const char, double> >]':
/usr/include/c++/6/bits/stl_map.h:502:4: note: parameter passing for argument of type 'std::_Rb_tree<char, std::pair<const char, double>, std::_Select1st<std::pair<const char, double> >, std::less<char>, std::allocator<std::pair<const char, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const char, double> >}' will change in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
    ^~~
In file included from /usr/include/c++/6/map:60:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/AbstractAlphabet.h:52,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/LetterAlphabet.h:49,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/NucleicAlphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/DNA.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/AlphabetTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/StringSequenceTools.cpp:42:
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<char&&>, std::tuple<>}; _Key = char; _Val = std::pair<const char, double>; _KeyOfValue = std::_Select1st<std::pair<const char, double> >; _Compare = std::less<char>; _Alloc = std::allocator<std::pair<const char, double> >]':
/usr/include/c++/6/bits/stl_tree.h:2193:7: note: parameter passing for argument of type 'std::_Rb_tree<char, std::pair<const char, double>, std::_Select1st<std::pair<const char, double> >, std::less<char>, std::allocator<std::pair<const char, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const char, double> >}' will change in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = char; _Val = std::pair<const char, double>; _KeyOfValue = std::_Select1st<std::pair<const char, double> >; _Compare = std::less<char>; _Alloc = std::allocator<std::pair<const char, double> >]':
/usr/include/c++/6/bits/stl_tree.h:1928:5: note: parameter passing for argument of type 'std::_Rb_tree<char, std::pair<const char, double>, std::_Select1st<std::pair<const char, double> >, std::less<char>, std::allocator<std::pair<const char, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const char, double> >}' will change in GCC 7.1
     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 72%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/BppOAlphabetIndex2Format.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/BppOAlphabetIndex2Format.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.cpp
[ 72%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/BppOSequenceReaderFormat.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/BppOSequenceReaderFormat.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOSequenceReaderFormat.cpp
In file included from /usr/include/c++/6/vector:64:0,
                 from /usr/include/Bpp/Exceptions.h:46,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.cpp:40:
/usr/include/c++/6/bits/stl_vector.h: In copy constructor 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:324:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
    std::__uninitialized_copy_a(__x.begin(), __x.end(),
    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
           this->_M_impl._M_start,
           ~~~~~~~~~~~~~~~~~~~~~~~
           _M_get_Tp_allocator());
           ~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /usr/include/Bpp/Exceptions.h:46,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_move_if_noexcept_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = double*; _ForwardIterator = double*; _Allocator = std::allocator<double>]':
/usr/include/c++/6/bits/stl_uninitialized.h:304:69: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
   _GLIBCXX_MAKE_MOVE_IF_NOEXCEPT_ITERATOR(__last), __result, __alloc);
                                                                     ^
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:61:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /usr/include/c++/6/stdexcept:39,
                 from /usr/include/Bpp/Exceptions.h:45,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.cpp:40:
/usr/include/c++/6/bits/cpp_type_traits.h: In function '_Iterator std::__miter_base(_Iterator) [with _Iterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >]':
/usr/include/c++/6/bits/cpp_type_traits.h:408:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     __miter_base(_Iterator __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /usr/include/Bpp/Exceptions.h:46,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /usr/include/c++/6/stdexcept:39,
                 from /usr/include/Bpp/Exceptions.h:45,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.cpp:40:
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = const double*; _Container = std::vector<double>]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     __niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container> __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /usr/include/Bpp/Exceptions.h:46,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /usr/include/c++/6/stdexcept:39,
                 from /usr/include/Bpp/Exceptions.h:45,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.cpp:40:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
         __result));
                  ^
In file included from /usr/include/c++/6/vector:63:0,
                 from /usr/include/Bpp/Exceptions.h:46,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /usr/include/c++/6/stdexcept:39,
                 from /usr/include/Bpp/Exceptions.h:45,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.cpp:40:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = std::move_iterator<double*>; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /usr/include/c++/6/stdexcept:39,
                 from /usr/include/Bpp/Exceptions.h:45,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex1Format.cpp:40:
/usr/include/c++/6/bits/stl_iterator.h: In function 'decltype (std::__miter_base(__it.base())) std::__miter_base(std::move_iterator<_IteratorL>) [with _Iterator = double*]':
/usr/include/c++/6/bits/stl_iterator.h:1243:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __miter_base(move_iterator<_Iterator> __it)
     ^~~~~~~~~~~~
[ 73%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/BppOSequenceStreamReaderFormat.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/BppOSequenceStreamReaderFormat.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOSequenceStreamReaderFormat.cpp
In file included from /usr/include/c++/6/map:61:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolListTools.h:48,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolListTools.cpp:40:
/usr/include/c++/6/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = int; _Tp = double; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_map.h:483:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
    ^~~
In file included from /usr/include/c++/6/map:60:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolListTools.h:48,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolListTools.cpp:40:
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const int&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_tree.h:2193:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_tree.h:1928:5: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:64:0,
                 from /usr/include/Bpp/Exceptions.h:46,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.cpp:40:
/usr/include/c++/6/bits/stl_vector.h: In copy constructor 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:324:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
    std::__uninitialized_copy_a(__x.begin(), __x.end(),
    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
           this->_M_impl._M_start,
           ~~~~~~~~~~~~~~~~~~~~~~~
           _M_get_Tp_allocator());
           ~~~~~~~~~~~~~~~~~~~~~~
[ 73%] Building CXX object src/CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Transliterator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbpp_seq_shared_EXPORTS -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Transliterator.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Transliterator.cpp
In file included from /usr/include/c++/6/vector:63:0,
                 from /usr/include/Bpp/Exceptions.h:46,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_move_if_noexcept_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = double*; _ForwardIterator = double*; _Allocator = std::allocator<double>]':
/usr/include/c++/6/bits/stl_uninitialized.h:304:69: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
   _GLIBCXX_MAKE_MOVE_IF_NOEXCEPT_ITERATOR(__last), __result, __alloc);
                                                                     ^
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:61:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /usr/include/c++/6/stdexcept:39,
                 from /usr/include/Bpp/Exceptions.h:45,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.cpp:40:
/usr/include/c++/6/bits/cpp_type_traits.h: In function '_Iterator std::__miter_base(_Iterator) [with _Iterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >]':
/usr/include/c++/6/bits/cpp_type_traits.h:408:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     __miter_base(_Iterator __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /usr/include/Bpp/Exceptions.h:46,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /usr/include/c++/6/stdexcept:39,
                 from /usr/include/Bpp/Exceptions.h:45,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.cpp:40:
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = const double*; _Container = std::vector<double>]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     __niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container> __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /usr/include/Bpp/Exceptions.h:46,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /usr/include/c++/6/stdexcept:39,
                 from /usr/include/Bpp/Exceptions.h:45,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.cpp:40:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
         __result));
                  ^
In file included from /usr/include/c++/6/vector:63:0,
                 from /usr/include/Bpp/Exceptions.h:46,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.cpp:40:
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /usr/include/c++/6/stdexcept:39,
                 from /usr/include/Bpp/Exceptions.h:45,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.cpp:40:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = std::move_iterator<double*>; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /usr/include/c++/6/stdexcept:39,
                 from /usr/include/Bpp/Exceptions.h:45,
                 from /usr/include/Bpp/Io/IoFormat.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOAlphabetIndex2Format.cpp:40:
/usr/include/c++/6/bits/stl_iterator.h: In function 'decltype (std::__miter_base(__it.base())) std::__miter_base(std::move_iterator<_IteratorL>) [with _Iterator = double*]':
/usr/include/c++/6/bits/stl_iterator.h:1243:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __miter_base(move_iterator<_Iterator> __it)
     ^~~~~~~~~~~~
[ 74%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/BppOSequenceWriterFormat.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/BppOSequenceWriterFormat.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/BppOSequenceWriterFormat.cpp
[ 74%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/Clustal.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/Clustal.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/Clustal.cpp
[ 75%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/Dcse.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/Dcse.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/Dcse.cpp
[ 76%] Linking CXX shared library libbpp-seq.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/bpp-seq-shared.dir/link.txt --verbose=1
/usr/bin/c++  -fPIC -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libbpp-seq.so.11 -o libbpp-seq.so.11.0.0 CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/AbstractAlphabet.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/AlphabetExceptions.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/AlphabetTools.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/BinaryAlphabet.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/CaseMaskedAlphabet.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/CodonAlphabet.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/DNA.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/DefaultAlphabet.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/IntegerAlphabet.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/LetterAlphabet.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/LexicalAlphabet.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/NumericAlphabet.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/ProteicAlphabet.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/RNA.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/RNY.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Alphabet/WordAlphabet.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/AlphabetIndex/AAIndex1Entry.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/AlphabetIndex/SimpleScore.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/App/SequenceApplicationTools.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/CodonSiteTools.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/AbstractSequenceContainer.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/AlignedSequenceContainer.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/CompressedVectorSiteContainer.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/MapSequenceContainer.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/SequenceContainerIterator.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/SequenceContainerTools.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/SiteContainerExceptions.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/SiteContainerIterator.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/SiteContainerTools.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/VectorSequenceContainer.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Container/VectorSiteContainer.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/DNAToRNA.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/DistanceMatrix.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/GeneticCode/AscidianMitochondrialGeneticCode.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/GeneticCode/EchinodermMitochondrialGeneticCode.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/GeneticCode/GeneticCode.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/GeneticCode/InvertebrateMitochondrialGeneticCode.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/GeneticCode/MoldMitochondrialGeneticCode.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/GeneticCode/StandardGeneticCode.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/GeneticCode/VertebrateMitochondrialGeneticCode.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/GeneticCode/YeastMitochondrialGeneticCode.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/BppOAlignmentReaderFormat.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/BppOAlignmentWriterFormat.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/BppOAlphabetIndex1Format.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/BppOAlphabetIndex2Format.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/BppOSequenceReaderFormat.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/BppOSequenceStreamReaderFormat.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/BppOSequenceWriterFormat.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/Clustal.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/Dcse.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/Fasta.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/GenBank.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/IoSequenceFactory.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/Mase.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/MaseTools.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/NexusIoSequence.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/NexusTools.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/PhredPhd.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/PhredPoly.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/Phylip.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/Stockholm.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Io/StreamSequenceIterator.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/NucleicAcidsReplication.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Sequence.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SequenceExceptions.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SequencePositionIterators.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SequenceTools.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SequenceWalker.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SequenceWithAnnotation.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SequenceWithAnnotationTools.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SequenceWithQuality.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SequenceWithQualityTools.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/Site.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SiteExceptions.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SiteTools.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/StringSequenceTools.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SymbolList.cpp.o CMakeFiles/bpp-seq-shared.dir/Bpp/Seq/SymbolListTools.cpp.o 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[ 81%] Linking CXX executable test_bowker
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/usr/bin/c++   -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion  -Wl,-z,relro -Wl,-z,now CMakeFiles/test_bowker.dir/test_bowker.cpp.o  -o test_bowker -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src -rdynamic ../src/libbpp-seq.so.11.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-core.so.3.0.0 
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[ 83%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/NexusIoSequence.cpp.o
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[ 83%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/NexusTools.cpp.o
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[ 84%] Linking CXX executable test_alignment_scores
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/usr/bin/c++   -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion  -Wl,-z,relro -Wl,-z,now CMakeFiles/test_alignment_scores.dir/test_alignment_scores.cpp.o  -o test_alignment_scores -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src -rdynamic ../src/libbpp-seq.so.11.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-core.so.3.0.0 
[ 85%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/PhredPhd.cpp.o
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/usr/bin/c++   -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion  -Wl,-z,relro -Wl,-z,now CMakeFiles/test_io.dir/test_io.cpp.o  -o test_io -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src -rdynamic ../src/libbpp-seq.so.11.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-core.so.3.0.0 
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make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test/CMakeFiles/test_walker.dir/DependInfo.cmake --color=
Scanning dependencies of target test_walker
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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[ 87%] Building CXX object test/CMakeFiles/test_walker.dir/test_walker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -fPIE   -o CMakeFiles/test_walker.dir/test_walker.cpp.o -c /<<PKGBUILDDIR>>/test/test_walker.cpp
[ 87%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/PhredPoly.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/PhredPoly.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/PhredPoly.cpp
[ 88%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/Phylip.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/Phylip.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/Phylip.cpp
[ 88%] Linking CXX executable test_sequences
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sequences.dir/link.txt --verbose=1
/usr/bin/c++   -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion  -Wl,-z,relro -Wl,-z,now CMakeFiles/test_sequences.dir/test_sequences.cpp.o  -o test_sequences -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src -rdynamic ../src/libbpp-seq.so.11.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-core.so.3.0.0 
[ 89%] Linking CXX executable test_walker
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_walker.dir/link.txt --verbose=1
/usr/bin/c++   -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion  -Wl,-z,relro -Wl,-z,now CMakeFiles/test_walker.dir/test_walker.cpp.o  -o test_walker -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src -rdynamic ../src/libbpp-seq.so.11.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-core.so.3.0.0 
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 89%] Built target test_sequences
[ 90%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/Stockholm.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/Stockholm.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/Stockholm.cpp
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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[ 90%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/StreamSequenceIterator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/StreamSequenceIterator.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Io/StreamSequenceIterator.cpp
[ 91%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/NucleicAcidsReplication.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/NucleicAcidsReplication.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/NucleicAcidsReplication.cpp
[ 91%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Sequence.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Sequence.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Sequence.cpp
[ 92%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SequenceExceptions.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SequenceExceptions.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceExceptions.cpp
[ 92%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SequencePositionIterators.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SequencePositionIterators.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/SequencePositionIterators.cpp
[ 93%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SequenceTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SequenceTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.cpp
[ 93%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SequenceWalker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SequenceWalker.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceWalker.cpp
[ 94%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SequenceWithAnnotation.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SequenceWithAnnotation.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceWithAnnotation.cpp
[ 94%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SequenceWithAnnotationTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SequenceWithAnnotationTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceWithAnnotationTools.cpp
[ 95%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SequenceWithQuality.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SequenceWithQuality.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceWithQuality.cpp
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.cpp:42:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_move_if_noexcept_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = double*; _ForwardIterator = double*; _Allocator = std::allocator<double>]':
/usr/include/c++/6/bits/stl_uninitialized.h:304:69: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
   _GLIBCXX_MAKE_MOVE_IF_NOEXCEPT_ITERATOR(__last), __result, __alloc);
                                                                     ^
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.cpp:42:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = std::move_iterator<double*>; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.cpp:42:
/usr/include/c++/6/bits/stl_iterator.h: In function 'decltype (std::__miter_base(__it.base())) std::__miter_base(std::move_iterator<_IteratorL>) [with _Iterator = double*]':
/usr/include/c++/6/bits/stl_iterator.h:1243:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __miter_base(move_iterator<_Iterator> __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:64:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.cpp:42:
/usr/include/c++/6/bits/stl_vector.h: In copy constructor 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/6/bits/stl_vector.h:324:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
    std::__uninitialized_copy_a(__x.begin(), __x.end(),
    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
           this->_M_impl._M_start,
           ~~~~~~~~~~~~~~~~~~~~~~~
           _M_get_Tp_allocator());
           ~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.cpp:42:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.cpp:42:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
/usr/include/c++/6/bits/stl_algobase.h:456:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
         __result));
                  ^
In file included from /usr/include/c++/6/bits/stl_algobase.h:61:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.cpp:42:
/usr/include/c++/6/bits/cpp_type_traits.h: In function '_Iterator std::__miter_base(_Iterator) [with _Iterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >]':
/usr/include/c++/6/bits/cpp_type_traits.h:408:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __miter_base(_Iterator __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.cpp:42:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __copy_move_a2(_II __first, _II __last, _OI __result)
     ^~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_algobase.h:420:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceTools.cpp:42:
/usr/include/c++/6/bits/stl_iterator.h: In function '_Iterator std::__niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container>) [with _Iterator = const double*; _Container = std::vector<double, std::allocator<double> >]':
/usr/include/c++/6/bits/stl_iterator.h:980:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double, std::allocator<double> > >' will change in GCC 7.1
     __niter_base(__gnu_cxx::__normal_iterator<_Iterator, _Container> __it)
     ^~~~~~~~~~~~
[ 96%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SequenceWithQualityTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SequenceWithQualityTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/SequenceWithQualityTools.cpp
[ 96%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Site.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Site.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Site.cpp
[ 97%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SiteExceptions.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SiteExceptions.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteExceptions.cpp
[ 97%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SiteTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SiteTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteTools.cpp
[ 98%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/StringSequenceTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/StringSequenceTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/StringSequenceTools.cpp
[ 98%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SymbolList.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SymbolList.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolList.cpp
In file included from /usr/include/c++/6/map:61:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolListTools.h:48,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteTools.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteTools.cpp:41:
/usr/include/c++/6/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = int; _Tp = double; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_map.h:483:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
    ^~~
/usr/include/c++/6/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = int; _Tp = double; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_map.h:502:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
    ^~~
[ 99%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SymbolListTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SymbolListTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolListTools.cpp
In file included from /usr/include/c++/6/map:60:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolListTools.h:48,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteTools.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteTools.cpp:41:
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const int&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_tree.h:2193:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_tree.h:2193:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolList.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolListTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteTools.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteTools.cpp:41:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_move_if_noexcept_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = double*; _ForwardIterator = double*; _Allocator = std::allocator<double>]':
/usr/include/c++/6/bits/stl_uninitialized.h:304:69: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
   _GLIBCXX_MAKE_MOVE_IF_NOEXCEPT_ITERATOR(__last), __result, __alloc);
                                                                     ^
[ 99%] Building CXX object src/CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Transliterator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++    -I/<<PKGBUILDDIR>>/src  -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Transliterator.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/Transliterator.cpp
In file included from /usr/include/c++/6/map:60:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolListTools.h:48,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteTools.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteTools.cpp:41:
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_tree.h:1928:5: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/map:61:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/AbstractAlphabet.h:52,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/LetterAlphabet.h:49,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/NucleicAlphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/DNA.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/AlphabetTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/StringSequenceTools.cpp:42:
/usr/include/c++/6/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = char; _Tp = double; _Compare = std::less<char>; _Alloc = std::allocator<std::pair<const char, double> >]':
/usr/include/c++/6/bits/stl_map.h:502:4: note: parameter passing for argument of type 'std::_Rb_tree<char, std::pair<const char, double>, std::_Select1st<std::pair<const char, double> >, std::less<char>, std::allocator<std::pair<const char, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const char, double> >}' will change in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
    ^~~
In file included from /usr/include/c++/6/map:60:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/AbstractAlphabet.h:52,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/LetterAlphabet.h:49,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/NucleicAlphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/DNA.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/AlphabetTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/StringSequenceTools.cpp:42:
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<char&&>, std::tuple<>}; _Key = char; _Val = std::pair<const char, double>; _KeyOfValue = std::_Select1st<std::pair<const char, double> >; _Compare = std::less<char>; _Alloc = std::allocator<std::pair<const char, double> >]':
/usr/include/c++/6/bits/stl_tree.h:2193:7: note: parameter passing for argument of type 'std::_Rb_tree<char, std::pair<const char, double>, std::_Select1st<std::pair<const char, double> >, std::less<char>, std::allocator<std::pair<const char, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const char, double> >}' will change in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/6/vector:63:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/Alphabet.h:45,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolList.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolListTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteTools.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteTools.cpp:41:
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*; _Tp = double]':
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __uninitialized_copy_a(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:279:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:281:63: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     { return std::uninitialized_copy(__first, __last, __result); }
                                                               ^
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = char; _Val = std::pair<const char, double>; _KeyOfValue = std::_Select1st<std::pair<const char, double> >; _Compare = std::less<char>; _Alloc = std::allocator<std::pair<const char, double> >]':
/usr/include/c++/6/bits/stl_tree.h:1928:5: note: parameter passing for argument of type 'std::_Rb_tree<char, std::pair<const char, double>, std::_Select1st<std::pair<const char, double> >, std::less<char>, std::allocator<std::pair<const char, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const char, double> >}' will change in GCC 7.1
     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h: In function '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     uninitialized_copy(_InputIterator __first, _InputIterator __last,
     ^~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:107:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:126:41: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
  __uninit_copy(__first, __last, __result);
                                         ^
/usr/include/c++/6/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<true>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator<double*>; _ForwardIterator = double*]':
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         __uninit_copy(_InputIterator __first, _InputIterator __last,
         ^~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_uninitialized.h:91:9: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
/usr/include/c++/6/bits/stl_uninitialized.h:93:53: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
         { return std::copy(__first, __last, __result); }
                                                     ^
In file included from /usr/include/c++/6/bits/char_traits.h:39:0,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolList.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolListTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteTools.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteTools.cpp:41:
/usr/include/c++/6/bits/stl_algobase.h: In function '_OI std::copy(_II, _II, _OI) [with _II = std::move_iterator<double*>; _OI = double*]':
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     copy(_II __first, _II __last, _OI __result)
     ^~~~
/usr/include/c++/6/bits/stl_algobase.h:446:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
In file included from /usr/include/c++/6/bits/stl_algobase.h:67:0,
                 from /usr/include/c++/6/bits/char_traits.h:39,
                 from /usr/include/c++/6/string:40,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/Alphabet/Alphabet.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolList.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolListTools.h:43,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteTools.h:44,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SiteTools.cpp:41:
/usr/include/c++/6/bits/stl_iterator.h: In function 'decltype (std::__miter_base(__it.base())) std::__miter_base(std::move_iterator<_IteratorL>) [with _Iterator = double*]':
/usr/include/c++/6/bits/stl_iterator.h:1243:5: note: parameter passing for argument of type 'std::move_iterator<double*>' will change in GCC 7.1
     __miter_base(move_iterator<_Iterator> __it)
     ^~~~~~~~~~~~
In file included from /usr/include/c++/6/map:61:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolListTools.h:48,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolListTools.cpp:40:
/usr/include/c++/6/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = int; _Tp = double; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_map.h:483:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
    ^~~
In file included from /usr/include/c++/6/map:60:0,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolListTools.h:48,
                 from /<<PKGBUILDDIR>>/src/Bpp/Seq/SymbolListTools.cpp:40:
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const int&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_tree.h:2193:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/6/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/6/bits/stl_tree.h:1928:5: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' will change in GCC 7.1
     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[100%] Linking CXX static library libbpp-seq.a
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -P CMakeFiles/bpp-seq-static.dir/cmake_clean_target.cmake
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/bpp-seq-static.dir/link.txt --verbose=1
/usr/bin/ar qc libbpp-seq.a  CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/AbstractAlphabet.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/AlphabetExceptions.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/AlphabetTools.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/BinaryAlphabet.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/CaseMaskedAlphabet.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/CodonAlphabet.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/DNA.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/DefaultAlphabet.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/IntegerAlphabet.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/LetterAlphabet.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/LexicalAlphabet.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/NumericAlphabet.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/ProteicAlphabet.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/RNA.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/RNY.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Alphabet/WordAlphabet.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/AlphabetIndex/AAIndex1Entry.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/AlphabetIndex/SimpleScore.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/App/SequenceApplicationTools.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/CodonSiteTools.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/AbstractSequenceContainer.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/AlignedSequenceContainer.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/CompressedVectorSiteContainer.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/MapSequenceContainer.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/SequenceContainerIterator.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/SequenceContainerTools.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/SiteContainerExceptions.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/SiteContainerIterator.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/SiteContainerTools.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/VectorSequenceContainer.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Container/VectorSiteContainer.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/DNAToRNA.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/DistanceMatrix.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/GeneticCode/AscidianMitochondrialGeneticCode.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/GeneticCode/EchinodermMitochondrialGeneticCode.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/GeneticCode/GeneticCode.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/GeneticCode/InvertebrateMitochondrialGeneticCode.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/GeneticCode/MoldMitochondrialGeneticCode.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/GeneticCode/StandardGeneticCode.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/GeneticCode/VertebrateMitochondrialGeneticCode.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/GeneticCode/YeastMitochondrialGeneticCode.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/BppOAlignmentReaderFormat.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/BppOAlignmentWriterFormat.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/BppOAlphabetIndex1Format.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/BppOAlphabetIndex2Format.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/BppOSequenceReaderFormat.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/BppOSequenceStreamReaderFormat.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/BppOSequenceWriterFormat.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/Clustal.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/Dcse.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/Fasta.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/GenBank.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/IoSequenceFactory.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/Mase.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/MaseTools.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/NexusIoSequence.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/NexusTools.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/PhredPhd.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/PhredPoly.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/Phylip.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/Stockholm.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Io/StreamSequenceIterator.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/NucleicAcidsReplication.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Sequence.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SequenceExceptions.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SequencePositionIterators.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SequenceTools.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SequenceWalker.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SequenceWithAnnotation.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SequenceWithAnnotationTools.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SequenceWithQuality.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SequenceWithQualityTools.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Site.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SiteExceptions.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SiteTools.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/StringSequenceTools.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SymbolList.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/SymbolListTools.cpp.o CMakeFiles/bpp-seq-static.dir/Bpp/Seq/Transliterator.cpp.o
/usr/bin/ranlib libbpp-seq.a
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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Running tests...
/usr/bin/ctest --force-new-ctest-process -j4
Test project /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf
    Start 1: test_alignment_scores
    Start 2: test_alphabets
    Start 3: test_bowker
    Start 4: test_containers
1/7 Test #1: test_alignment_scores ............   Passed    0.03 sec
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3/7 Test #4: test_containers ..................   Passed    0.12 sec
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    Start 7: test_walker
4/7 Test #7: test_walker ......................   Passed    0.20 sec
5/7 Test #6: test_sequences ...................   Passed    0.21 sec
6/7 Test #5: test_io ..........................   Passed    0.41 sec
7/7 Test #3: test_bowker ......................   Passed  176.28 sec

100% tests passed, 0 tests failed out of 7

Total Test time (real) = 176.29 sec
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[ 96%] Built target test_alignment_scores
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test/CMakeFiles/test_io.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test/CMakeFiles/test_sequences.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test/CMakeFiles/test_walker.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f test/CMakeFiles/test_walker.dir/build.make test/CMakeFiles/test_walker.dir/build
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f test/CMakeFiles/test_sequences.dir/build.make test/CMakeFiles/test_sequences.dir/build
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f test/CMakeFiles/test_io.dir/build.make test/CMakeFiles/test_io.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'test/CMakeFiles/test_walker.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'test/CMakeFiles/test_sequences.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'test/CMakeFiles/test_io.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 98%] Built target test_walker
[ 99%] Built target test_sequences
[100%] Built target test_io
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles 0
make -f CMakeFiles/Makefile2 preinstall
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[2]: Nothing to be done for 'preinstall'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/cmake/bpp-seq/bpp-seq-config.cmake
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/cmake/bpp-seq/bpp-seq-config-version.cmake
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/libbpp-seq.a
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/libbpp-seq.so.11.0.0
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/libbpp-seq.so.11
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/libbpp-seq.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/CodonSiteTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/SymbolListTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/SiteTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/SequenceWithAnnotationTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/CoreSequence.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/SequenceWalker.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/IntegerAlphabet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/RNY.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/DNA.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/WordAlphabet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/ProteicAlphabet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/CodonAlphabet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/NucleicAlphabetState.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/RNA.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/AlphabetState.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/AlphabetNumericState.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/AbstractAlphabet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/NumericAlphabet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/AlphabetTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/LexicalAlphabet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/CaseMaskedAlphabet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/ProteicAlphabetState.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/AlphabetExceptions.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/BinaryAlphabet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/LetterAlphabet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/NucleicAlphabet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/DefaultAlphabet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/Alphabet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/SequenceExceptions.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/SymbolList.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/SequenceIterator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Sequence.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/CoreSite.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/NucleicAcidsReplication.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/NexusIoSequence.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/SequenceFileIndex.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/OSequence.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/OSequenceStream.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/BppOAlignmentReaderFormat.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/IoSequenceStream.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/Mase.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/ISequenceStream.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/PhredPhd.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/IoSequence.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/PhredPoly.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/Clustal.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/AbstractISequence.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/Phylip.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/ISequence.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/Dcse.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/AbstractIAlignment.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/BppOSequenceWriterFormat.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/Stockholm.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/BppOAlphabetIndex1Format.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/NexusTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/BppOAlignmentWriterFormat.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/StreamSequenceIterator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/AbstractOAlignment.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/IoSequenceFactory.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/MaseTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/BppOSequenceReaderFormat.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/AbstractOSequence.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/BppOAlphabetIndex2Format.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/BppOSequenceStreamReaderFormat.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/GenBank.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/Fasta.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/GeneticCode
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/GeneticCode/VertebrateMitochondrialGeneticCode.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/GeneticCode/AscidianMitochondrialGeneticCode.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/GeneticCode/GeneticCode.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/GeneticCode/YeastMitochondrialGeneticCode.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/GeneticCode/MoldMitochondrialGeneticCode.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/GeneticCode/InvertebrateMitochondrialGeneticCode.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/GeneticCode/StandardGeneticCode.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/GeneticCode/EchinodermMitochondrialGeneticCode.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/SequencePositionIterators.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/SequenceTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/GranthamAAVolumeIndex.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/AASEASup30Index.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/BLOSUM50.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/AAMassIndex.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/SimpleScore.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/UserAlphabetIndex1.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/AASurfaceIndex.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/AAChouFasmanBSheetIndex.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/AAChargeIndex.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/GranthamAAPolarityIndex.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/AAChouFasmanAHelixIndex.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/AAVolumeIndex.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/SimpleIndexDistance.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/AAChenGuHuangHydrophobicityIndex.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/AAIndex1Entry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/AASEAInf10Index.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/AASEA1030Index.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/AlphabetIndex1.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/AAChouFasmanTurnIndex.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/KleinAANetChargeIndex.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/DistanceMatrix.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/SequenceWithQuality.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/SequenceWithAnnotation.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/SiteExceptions.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/SiteIterator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/SequenceWithQualityTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/App
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/App/SequenceApplicationTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/DNAToRNA.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Site.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Transliterator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/StringSequenceTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container/AlignedSequenceContainer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container/SequenceContainer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container/SiteContainer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container/SiteContainerIterator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container/AbstractSequenceContainer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container/SequenceContainerIterator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container/VectorSequenceContainer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container/SiteContainerExceptions.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container/SequenceContainerExceptions.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container/MapSequenceContainer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container/SequenceContainerTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container/VectorSiteContainer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container/CompressedVectorSiteContainer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container/SiteContainerTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container/OrderedSequenceContainer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/cmake/bpp-seq/bpp-seq-targets.cmake
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/cmake/bpp-seq/bpp-seq-targets-none.cmake
make[1]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
   debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
# Broken header, don't install (if we do, the postinst will pull it
# into generic include files)
rm -f debian/tmp/usr/include/Bpp/Seq/Container/VectorProbabilisticSiteContainer.h
dh_install
d-shlibmove --commit \
	    --multiarch \
	    --devunversioned \
	    --exclude-la \
                    --movedev debian/tmp/usr/include/* usr/include \
                    --movedev debian/tmp/usr/lib/*/cmake usr/lib/arm-linux-gnueabihf \
                    debian/tmp/usr/lib/*/*.so
Library package automatic movement utility
 --> libbpp-core-dev package exists.
set -e
install -d -m 755 debian/libbpp-seq-dev/usr/lib/arm-linux-gnueabihf
install -d -m 755 debian/libbpp-seq11/usr/lib/arm-linux-gnueabihf
mv debian/tmp/usr/lib/arm-linux-gnueabihf/libbpp-seq.a debian/libbpp-seq-dev/usr/lib/arm-linux-gnueabihf
mv debian/tmp/usr/lib/arm-linux-gnueabihf/libbpp-seq.so debian/libbpp-seq-dev/usr/lib/arm-linux-gnueabihf
mv /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/libbpp-seq.so.11 debian/libbpp-seq11/usr/lib/arm-linux-gnueabihf
mv /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/libbpp-seq.so.11.0.0 debian/libbpp-seq11/usr/lib/arm-linux-gnueabihf
PKGDEV=libbpp-seq-dev
PKGSHL=libbpp-seq11
install -d -m 755 debian/libbpp-seq-dev/usr/include
mv debian/tmp/usr/include/Bpp debian/libbpp-seq-dev/usr/include
install -d -m 755 debian/libbpp-seq-dev/usr/lib/arm-linux-gnueabihf
mv debian/tmp/usr/lib/arm-linux-gnueabihf/cmake debian/libbpp-seq-dev/usr/lib/arm-linux-gnueabihf
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_installdocs -a
   dh_installchangelogs -a
   dh_perl -a
   dh_link -a
   dh_strip_nondeterminism -a
   dh_compress -a
   dh_fixperms -a
   dh_strip -a
   dh_makeshlibs -a
   dh_shlibdeps -a
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libbpp-seq11/usr/lib/arm-linux-gnueabihf/libbpp-seq.so.11.0.0 found in none of the libraries
   dh_installdeb -a
   dh_gencontrol -a
dpkg-gencontrol: warning: package libbpp-seq-dev: unused substitution variable ${devlibs:Depends}
   dh_md5sums -a
   dh_builddeb -a
dpkg-deb: building package 'libbpp-seq-dev' in '../libbpp-seq-dev_2.3.1-7_armhf.deb'.
dpkg-deb: building package 'libbpp-seq11-dbgsym' in '../libbpp-seq11-dbgsym_2.3.1-7_armhf.deb'.
dpkg-deb: building package 'libbpp-seq11' in '../libbpp-seq11_2.3.1-7_armhf.deb'.
 dpkg-genbuildinfo --build=any
 dpkg-genchanges --build=any -mRaspbian mythic lxc autobuilder 1 <root@raspbian.org> >../libbpp-seq_2.3.1-7_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build libbpp-seq-2.3.1
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2017-07-24T05:25:14Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Post Build Chroot                                                            |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


libbpp-seq_2.3.1-7_armhf.changes:
---------------------------------

Format: 1.8
Date: Tue, 18 Jul 2017 21:01:24 +0200
Source: libbpp-seq
Binary: libbpp-seq-dev libbpp-seq11
Architecture: armhf
Version: 2.3.1-7
Distribution: buster-staging
Urgency: medium
Maintainer: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Changed-By: Julien Dutheil <julien.dutheil@univ-montp2.fr>
Description:
 libbpp-seq-dev - Bio++ Sequence library development files
 libbpp-seq11 - Bio++ Sequence library
Changes:
 libbpp-seq (2.3.1-7) unstable; urgency=medium
 .
   * Make tests work on 32 bits archs (enabled position independent code).
Checksums-Sha1:
 3595c99b243ed7c1a0023e8f25e49d4a8e32d49a 1667628 libbpp-seq-dev_2.3.1-7_armhf.deb
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 ccfa70e2407fef084c02f39f26c6aa41 1667628 libdevel optional libbpp-seq-dev_2.3.1-7_armhf.deb
 fc6fecde66ee73681833224a5828bfd7 129156 debug extra libbpp-seq11-dbgsym_2.3.1-7_armhf.deb
 54a248fd5e45f6196bb1d211fb4cfadb 427368 libs optional libbpp-seq11_2.3.1-7_armhf.deb
 343edc3ba7919a676424783dfbfc7f46 6021 science optional libbpp-seq_2.3.1-7_armhf.buildinfo

+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


libbpp-seq-dev_2.3.1-7_armhf.deb
--------------------------------

 new debian package, version 2.0.
 size 1667628 bytes: control archive=4680 bytes.
     868 bytes,    19 lines      control              
   10990 bytes,   135 lines      md5sums              
 Package: libbpp-seq-dev
 Source: libbpp-seq
 Version: 2.3.1-7
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 25215
 Depends: libbpp-seq11 (= 2.3.1-7), libbpp-core-dev (>= 2.3.1)
 Section: libdevel
 Priority: optional
 Homepage: http://biopp.univ-montp2.fr/wiki/index.php/Main_Page
 Description: Bio++ Sequence library development files
  Bio++ is a set of C++ libraries for Bioinformatics, including sequence
  analysis, phylogenetics, molecular evolution and population genetics.
  Bio++ is Object Oriented and is designed to be both easy to use and
  computer efficient. Bio++ intends to help programmers to write computer
  expensive programs, by providing them a set of re-usable tools.
  .
  This package contains the static library and the header files of Bio++
  classes for sequence analysis classes.

drwxr-xr-x root/root         0 2017-07-18 19:01 ./
drwxr-xr-x root/root         0 2017-07-18 19:01 ./usr/
drwxr-xr-x root/root         0 2017-07-18 19:01 ./usr/include/
drwxr-xr-x root/root         0 2017-07-18 19:01 ./usr/include/Bpp/
drwxr-xr-x root/root         0 2017-07-18 19:01 ./usr/include/Bpp/Seq/
drwxr-xr-x root/root         0 2017-07-18 19:01 ./usr/include/Bpp/Seq/Alphabet/
-rw-r--r-- root/root      9381 2017-06-07 16:40 ./usr/include/Bpp/Seq/Alphabet/AbstractAlphabet.h
-rw-r--r-- root/root     17538 2017-06-07 16:40 ./usr/include/Bpp/Seq/Alphabet/Alphabet.h
-rw-r--r-- root/root      6291 2017-06-07 16:40 ./usr/include/Bpp/Seq/Alphabet/AlphabetExceptions.h
-rw-r--r-- root/root      2835 2017-06-07 16:40 ./usr/include/Bpp/Seq/Alphabet/AlphabetNumericState.h
-rw-r--r-- root/root      3834 2017-06-07 16:40 ./usr/include/Bpp/Seq/Alphabet/AlphabetState.h
-rw-r--r-- root/root      8370 2017-06-07 16:40 ./usr/include/Bpp/Seq/Alphabet/AlphabetTools.h
-rw-r--r-- root/root      2956 2017-06-07 16:40 ./usr/include/Bpp/Seq/Alphabet/BinaryAlphabet.h
-rw-r--r-- root/root      4567 2017-06-07 16:40 ./usr/include/Bpp/Seq/Alphabet/CaseMaskedAlphabet.h
-rw-r--r-- root/root      6350 2017-06-07 16:40 ./usr/include/Bpp/Seq/Alphabet/CodonAlphabet.h
-rw-r--r-- root/root      3181 2017-06-07 16:40 ./usr/include/Bpp/Seq/Alphabet/DNA.h
-rw-r--r-- root/root      3102 2017-06-07 16:40 ./usr/include/Bpp/Seq/Alphabet/DefaultAlphabet.h
-rw-r--r-- root/root      2984 2017-06-07 16:40 ./usr/include/Bpp/Seq/Alphabet/IntegerAlphabet.h
-rw-r--r-- root/root      4206 2017-06-07 16:40 ./usr/include/Bpp/Seq/Alphabet/LetterAlphabet.h
-rw-r--r-- root/root      3307 2017-06-07 16:40 ./usr/include/Bpp/Seq/Alphabet/LexicalAlphabet.h
-rw-r--r-- root/root      8931 2017-06-07 16:40 ./usr/include/Bpp/Seq/Alphabet/NucleicAlphabet.h
-rw-r--r-- root/root      4181 2017-06-07 16:40 ./usr/include/Bpp/Seq/Alphabet/NucleicAlphabetState.h
-rw-r--r-- root/root      3962 2017-06-07 16:40 ./usr/include/Bpp/Seq/Alphabet/NumericAlphabet.h
-rw-r--r-- root/root      4912 2017-06-07 16:40 ./usr/include/Bpp/Seq/Alphabet/ProteicAlphabet.h
-rw-r--r-- root/root      2784 2017-06-07 16:40 ./usr/include/Bpp/Seq/Alphabet/ProteicAlphabetState.h
-rw-r--r-- root/root      3130 2017-06-07 16:40 ./usr/include/Bpp/Seq/Alphabet/RNA.h
-rw-r--r-- root/root      4284 2017-06-07 16:40 ./usr/include/Bpp/Seq/Alphabet/RNY.h
-rw-r--r-- root/root     11454 2017-06-07 16:40 ./usr/include/Bpp/Seq/Alphabet/WordAlphabet.h
drwxr-xr-x root/root         0 2017-07-18 19:01 ./usr/include/Bpp/Seq/AlphabetIndex/
-rw-r--r-- root/root      5112 2017-06-07 16:40 ./usr/include/Bpp/Seq/AlphabetIndex/AAChargeIndex.h
-rw-r--r-- root/root      4349 2017-06-07 16:40 ./usr/include/Bpp/Seq/AlphabetIndex/AAChenGuHuangHydrophobicityIndex.h
-rw-r--r-- root/root      3698 2017-06-07 16:40 ./usr/include/Bpp/Seq/AlphabetIndex/AAChouFasmanAHelixIndex.h
-rw-r--r-- root/root      3696 2017-06-07 16:40 ./usr/include/Bpp/Seq/AlphabetIndex/AAChouFasmanBSheetIndex.h
-rw-r--r-- root/root      3619 2017-06-07 16:40 ./usr/include/Bpp/Seq/AlphabetIndex/AAChouFasmanTurnIndex.h
-rw-r--r-- root/root      3340 2017-06-07 16:40 ./usr/include/Bpp/Seq/AlphabetIndex/AAIndex1Entry.h
-rw-r--r-- root/root      3982 2017-06-07 16:40 ./usr/include/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h
-rw-r--r-- root/root      3533 2017-06-07 16:40 ./usr/include/Bpp/Seq/AlphabetIndex/AAMassIndex.h
-rw-r--r-- root/root      3698 2017-06-07 16:40 ./usr/include/Bpp/Seq/AlphabetIndex/AASEA1030Index.h
-rw-r--r-- root/root      3725 2017-06-07 16:40 ./usr/include/Bpp/Seq/AlphabetIndex/AASEAInf10Index.h
-rw-r--r-- root/root      3724 2017-06-07 16:40 ./usr/include/Bpp/Seq/AlphabetIndex/AASEASup30Index.h
-rw-r--r-- root/root      3593 2017-06-07 16:40 ./usr/include/Bpp/Seq/AlphabetIndex/AASurfaceIndex.h
-rw-r--r-- root/root      3562 2017-06-07 16:40 ./usr/include/Bpp/Seq/AlphabetIndex/AAVolumeIndex.h
-rw-r--r-- root/root      3083 2017-06-07 16:40 ./usr/include/Bpp/Seq/AlphabetIndex/AlphabetIndex1.h
-rw-r--r-- root/root      3416 2017-06-07 16:40 ./usr/include/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h
-rw-r--r-- root/root      3275 2017-06-07 16:40 ./usr/include/Bpp/Seq/AlphabetIndex/BLOSUM50.h
-rw-r--r-- root/root      3610 2017-06-07 16:40 ./usr/include/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h
-rw-r--r-- root/root      5580 2017-06-07 16:40 ./usr/include/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.h
-rw-r--r-- root/root      4184 2017-06-07 16:40 ./usr/include/Bpp/Seq/AlphabetIndex/GranthamAAPolarityIndex.h
-rw-r--r-- root/root      4145 2017-06-07 16:40 ./usr/include/Bpp/Seq/AlphabetIndex/GranthamAAVolumeIndex.h
-rw-r--r-- root/root      4137 2017-06-07 16:40 ./usr/include/Bpp/Seq/AlphabetIndex/KleinAANetChargeIndex.h
-rw-r--r-- root/root      3730 2017-06-07 16:40 ./usr/include/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.h
-rw-r--r-- root/root      4238 2017-06-07 16:40 ./usr/include/Bpp/Seq/AlphabetIndex/SimpleIndexDistance.h
-rw-r--r-- root/root      3341 2017-06-07 16:40 ./usr/include/Bpp/Seq/AlphabetIndex/SimpleScore.h
-rw-r--r-- root/root      3212 2017-06-07 16:40 ./usr/include/Bpp/Seq/AlphabetIndex/UserAlphabetIndex1.h
drwxr-xr-x root/root         0 2017-07-18 19:01 ./usr/include/Bpp/Seq/App/
-rw-r--r-- root/root     12419 2017-06-07 16:40 ./usr/include/Bpp/Seq/App/SequenceApplicationTools.h
-rw-r--r-- root/root     11039 2017-06-07 16:40 ./usr/include/Bpp/Seq/CodonSiteTools.h
drwxr-xr-x root/root         0 2017-07-18 19:01 ./usr/include/Bpp/Seq/Container/
-rw-r--r-- root/root      5206 2017-06-07 16:40 ./usr/include/Bpp/Seq/Container/AbstractSequenceContainer.h
-rw-r--r-- root/root      7470 2017-06-07 16:40 ./usr/include/Bpp/Seq/Container/AlignedSequenceContainer.h
-rw-r--r-- root/root     12860 2017-06-07 16:40 ./usr/include/Bpp/Seq/Container/CompressedVectorSiteContainer.h
-rw-r--r-- root/root      8707 2017-06-07 16:40 ./usr/include/Bpp/Seq/Container/MapSequenceContainer.h
-rw-r--r-- root/root      9485 2017-06-07 16:40 ./usr/include/Bpp/Seq/Container/OrderedSequenceContainer.h
-rw-r--r-- root/root     11413 2017-06-07 16:40 ./usr/include/Bpp/Seq/Container/SequenceContainer.h
-rw-r--r-- root/root      4361 2017-06-07 16:40 ./usr/include/Bpp/Seq/Container/SequenceContainerExceptions.h
-rw-r--r-- root/root      3137 2017-06-07 16:40 ./usr/include/Bpp/Seq/Container/SequenceContainerIterator.h
-rw-r--r-- root/root     13016 2017-06-07 16:40 ./usr/include/Bpp/Seq/Container/SequenceContainerTools.h
-rw-r--r-- root/root      6991 2017-06-07 16:40 ./usr/include/Bpp/Seq/Container/SiteContainer.h
-rw-r--r-- root/root      2944 2017-06-07 16:40 ./usr/include/Bpp/Seq/Container/SiteContainerExceptions.h
-rw-r--r-- root/root      3884 2017-06-07 16:40 ./usr/include/Bpp/Seq/Container/SiteContainerIterator.h
-rw-r--r-- root/root     23703 2017-06-07 16:40 ./usr/include/Bpp/Seq/Container/SiteContainerTools.h
-rw-r--r-- root/root     10412 2017-06-07 16:40 ./usr/include/Bpp/Seq/Container/VectorSequenceContainer.h
-rw-r--r-- root/root     10295 2017-06-07 16:40 ./usr/include/Bpp/Seq/Container/VectorSiteContainer.h
-rw-r--r-- root/root      6403 2017-06-07 16:40 ./usr/include/Bpp/Seq/CoreSequence.h
-rw-r--r-- root/root      4280 2017-06-07 16:40 ./usr/include/Bpp/Seq/CoreSite.h
-rw-r--r-- root/root      3378 2017-06-07 16:40 ./usr/include/Bpp/Seq/DNAToRNA.h
-rw-r--r-- root/root      7414 2017-06-07 16:40 ./usr/include/Bpp/Seq/DistanceMatrix.h
drwxr-xr-x root/root         0 2017-07-18 19:01 ./usr/include/Bpp/Seq/GeneticCode/
-rw-r--r-- root/root      3710 2017-06-07 16:40 ./usr/include/Bpp/Seq/GeneticCode/AscidianMitochondrialGeneticCode.h
-rw-r--r-- root/root      3581 2017-06-07 16:40 ./usr/include/Bpp/Seq/GeneticCode/EchinodermMitochondrialGeneticCode.h
-rw-r--r-- root/root      8395 2017-06-07 16:40 ./usr/include/Bpp/Seq/GeneticCode/GeneticCode.h
-rw-r--r-- root/root      3697 2017-06-07 16:40 ./usr/include/Bpp/Seq/GeneticCode/InvertebrateMitochondrialGeneticCode.h
-rw-r--r-- root/root      3727 2017-06-07 16:40 ./usr/include/Bpp/Seq/GeneticCode/MoldMitochondrialGeneticCode.h
-rw-r--r-- root/root      3525 2017-06-07 16:40 ./usr/include/Bpp/Seq/GeneticCode/StandardGeneticCode.h
-rw-r--r-- root/root      3784 2017-06-07 16:40 ./usr/include/Bpp/Seq/GeneticCode/VertebrateMitochondrialGeneticCode.h
-rw-r--r-- root/root      3539 2017-06-07 16:40 ./usr/include/Bpp/Seq/GeneticCode/YeastMitochondrialGeneticCode.h
drwxr-xr-x root/root         0 2017-07-18 19:01 ./usr/include/Bpp/Seq/Io/
-rw-r--r-- root/root      5562 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/AbstractIAlignment.h
-rw-r--r-- root/root      5496 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/AbstractISequence.h
-rw-r--r-- root/root      2667 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/AbstractOAlignment.h
-rw-r--r-- root/root      3465 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/AbstractOSequence.h
-rw-r--r-- root/root      3340 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/BppOAlignmentReaderFormat.h
-rw-r--r-- root/root      3350 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/BppOAlignmentWriterFormat.h
-rw-r--r-- root/root      3968 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/BppOAlphabetIndex1Format.h
-rw-r--r-- root/root      3968 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/BppOAlphabetIndex2Format.h
-rw-r--r-- root/root      3329 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/BppOSequenceReaderFormat.h
-rw-r--r-- root/root      3357 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/BppOSequenceStreamReaderFormat.h
-rw-r--r-- root/root      3331 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/BppOSequenceWriterFormat.h
-rw-r--r-- root/root      4860 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/Clustal.h
-rw-r--r-- root/root      3306 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/Dcse.h
-rw-r--r-- root/root      7593 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/Fasta.h
-rw-r--r-- root/root      2716 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/GenBank.h
-rw-r--r-- root/root      4331 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/ISequence.h
-rw-r--r-- root/root      2594 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/ISequenceStream.h
-rw-r--r-- root/root      2156 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/IoSequence.h
-rw-r--r-- root/root      4364 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/IoSequenceFactory.h
-rw-r--r-- root/root      2057 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/IoSequenceStream.h
-rw-r--r-- root/root      8650 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/Mase.h
-rw-r--r-- root/root      6002 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/MaseTools.h
-rw-r--r-- root/root      4795 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/NexusIoSequence.h
-rw-r--r-- root/root      2981 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/NexusTools.h
-rw-r--r-- root/root      4356 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/OSequence.h
-rw-r--r-- root/root      2499 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/OSequenceStream.h
-rw-r--r-- root/root      4909 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/PhredPhd.h
-rw-r--r-- root/root      2936 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/PhredPoly.h
-rw-r--r-- root/root      6835 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/Phylip.h
-rw-r--r-- root/root      2625 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/SequenceFileIndex.h
-rw-r--r-- root/root      3788 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/Stockholm.h
-rw-r--r-- root/root      4174 2017-06-07 16:40 ./usr/include/Bpp/Seq/Io/StreamSequenceIterator.h
-rw-r--r-- root/root      3717 2017-06-07 16:40 ./usr/include/Bpp/Seq/NucleicAcidsReplication.h
-rw-r--r-- root/root     11621 2017-06-07 16:40 ./usr/include/Bpp/Seq/Sequence.h
-rw-r--r-- root/root      4598 2017-06-07 16:40 ./usr/include/Bpp/Seq/SequenceExceptions.h
-rw-r--r-- root/root      3171 2017-06-07 16:40 ./usr/include/Bpp/Seq/SequenceIterator.h
-rw-r--r-- root/root      6708 2017-06-07 16:40 ./usr/include/Bpp/Seq/SequencePositionIterators.h
-rw-r--r-- root/root     17072 2017-06-07 16:40 ./usr/include/Bpp/Seq/SequenceTools.h
-rw-r--r-- root/root      2926 2017-06-07 16:40 ./usr/include/Bpp/Seq/SequenceWalker.h
-rw-r--r-- root/root     14837 2017-06-07 16:40 ./usr/include/Bpp/Seq/SequenceWithAnnotation.h
-rw-r--r-- root/root      7094 2017-06-07 16:40 ./usr/include/Bpp/Seq/SequenceWithAnnotationTools.h
-rw-r--r-- root/root     26451 2017-06-07 16:40 ./usr/include/Bpp/Seq/SequenceWithQuality.h
-rw-r--r-- root/root      7347 2017-06-07 16:40 ./usr/include/Bpp/Seq/SequenceWithQualityTools.h
-rw-r--r-- root/root      5848 2017-06-07 16:40 ./usr/include/Bpp/Seq/Site.h
-rw-r--r-- root/root      3355 2017-06-07 16:40 ./usr/include/Bpp/Seq/SiteExceptions.h
-rw-r--r-- root/root      2354 2017-06-07 16:40 ./usr/include/Bpp/Seq/SiteIterator.h
-rw-r--r-- root/root      8688 2017-06-07 16:40 ./usr/include/Bpp/Seq/SiteTools.h
-rw-r--r-- root/root      7669 2017-06-07 16:40 ./usr/include/Bpp/Seq/StringSequenceTools.h
-rw-r--r-- root/root     22644 2017-06-07 16:40 ./usr/include/Bpp/Seq/SymbolList.h
-rw-r--r-- root/root      8342 2017-06-07 16:40 ./usr/include/Bpp/Seq/SymbolListTools.h
-rw-r--r-- root/root      5580 2017-06-07 16:40 ./usr/include/Bpp/Seq/Transliterator.h
drwxr-xr-x root/root         0 2017-07-18 19:01 ./usr/lib/
drwxr-xr-x root/root         0 2017-07-18 19:01 ./usr/lib/arm-linux-gnueabihf/
drwxr-xr-x root/root         0 2017-07-18 19:01 ./usr/lib/arm-linux-gnueabihf/cmake/
drwxr-xr-x root/root         0 2017-07-18 19:01 ./usr/lib/arm-linux-gnueabihf/cmake/bpp-seq/
-rw-r--r-- root/root      1610 2017-07-18 19:01 ./usr/lib/arm-linux-gnueabihf/cmake/bpp-seq/bpp-seq-config-version.cmake
-rw-r--r-- root/root      2261 2017-07-18 19:01 ./usr/lib/arm-linux-gnueabihf/cmake/bpp-seq/bpp-seq-config.cmake
-rw-r--r-- root/root      1470 2017-07-18 19:01 ./usr/lib/arm-linux-gnueabihf/cmake/bpp-seq/bpp-seq-targets-none.cmake
-rw-r--r-- root/root      3928 2017-07-18 19:01 ./usr/lib/arm-linux-gnueabihf/cmake/bpp-seq/bpp-seq-targets.cmake
-rw-r--r-- root/root  24971712 2017-07-18 19:01 ./usr/lib/arm-linux-gnueabihf/libbpp-seq.a
lrwxrwxrwx root/root         0 2017-07-18 19:01 ./usr/lib/arm-linux-gnueabihf/libbpp-seq.so -> libbpp-seq.so.11
drwxr-xr-x root/root         0 2017-07-18 19:01 ./usr/share/
drwxr-xr-x root/root         0 2017-07-18 19:01 ./usr/share/doc/
drwxr-xr-x root/root         0 2017-07-18 19:01 ./usr/share/doc/libbpp-seq-dev/
-rw-r--r-- root/root      1406 2017-07-18 19:01 ./usr/share/doc/libbpp-seq-dev/changelog.Debian.gz
-rw-r--r-- root/root      5033 2017-06-07 16:40 ./usr/share/doc/libbpp-seq-dev/changelog.gz
-rw-r--r-- root/root      3115 2017-07-18 19:01 ./usr/share/doc/libbpp-seq-dev/copyright


libbpp-seq11-dbgsym_2.3.1-7_armhf.deb
-------------------------------------

 new debian package, version 2.0.
 size 129156 bytes: control archive=519 bytes.
     465 bytes,    14 lines      control              
     106 bytes,     1 lines      md5sums              
 Package: libbpp-seq11-dbgsym
 Source: libbpp-seq
 Version: 2.3.1-7
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 991
 Depends: libbpp-seq11 (= 2.3.1-7)
 Section: debug
 Priority: extra
 Multi-Arch: same
 Homepage: http://biopp.univ-montp2.fr/wiki/index.php/Main_Page
 Description: Debug symbols for libbpp-seq11
 Build-Ids: d7fa82e95f1a7d0904fb8bb6c4dbadbba347ee6d

drwxr-xr-x root/root         0 2017-07-18 19:01 ./
drwxr-xr-x root/root         0 2017-07-18 19:01 ./usr/
drwxr-xr-x root/root         0 2017-07-18 19:01 ./usr/lib/
drwxr-xr-x root/root         0 2017-07-18 19:01 ./usr/lib/debug/
drwxr-xr-x root/root         0 2017-07-18 19:01 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2017-07-18 19:01 ./usr/lib/debug/.build-id/d7/
-rw-r--r-- root/root   1003952 2017-07-18 19:01 ./usr/lib/debug/.build-id/d7/fa82e95f1a7d0904fb8bb6c4dbadbba347ee6d.debug
drwxr-xr-x root/root         0 2017-07-18 19:01 ./usr/share/
drwxr-xr-x root/root         0 2017-07-18 19:01 ./usr/share/doc/
lrwxrwxrwx root/root         0 2017-07-18 19:01 ./usr/share/doc/libbpp-seq11-dbgsym -> libbpp-seq11


libbpp-seq11_2.3.1-7_armhf.deb
------------------------------

 new debian package, version 2.0.
 size 427368 bytes: control archive=931 bytes.
     841 bytes,    19 lines      control              
     309 bytes,     4 lines      md5sums              
      27 bytes,     1 lines      shlibs               
      60 bytes,     2 lines      triggers             
 Package: libbpp-seq11
 Source: libbpp-seq
 Version: 2.3.1-7
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 2572
 Depends: libbpp-core3 (>= 2.3.1), libc6 (>= 2.23), libgcc1 (>= 1:3.5), libstdc++6 (>= 5.2)
 Section: libs
 Priority: optional
 Multi-Arch: same
 Homepage: http://biopp.univ-montp2.fr/wiki/index.php/Main_Page
 Description: Bio++ Sequence library
  Bio++ is a set of C++ libraries for Bioinformatics, including sequence
  analysis, phylogenetics, molecular evolution and population genetics.
  Bio++ is Object Oriented and is designed to be both easy to use and
  computer efficient. Bio++ intends to help programmers to write computer
  expensive programs, by providing them a set of re-usable tools.
  .
  This package contains the Bio++ classes for sequence analysis.

drwxr-xr-x root/root         0 2017-07-18 19:01 ./
drwxr-xr-x root/root         0 2017-07-18 19:01 ./usr/
drwxr-xr-x root/root         0 2017-07-18 19:01 ./usr/lib/
drwxr-xr-x root/root         0 2017-07-18 19:01 ./usr/lib/arm-linux-gnueabihf/
lrwxrwxrwx root/root         0 2017-07-18 19:01 ./usr/lib/arm-linux-gnueabihf/libbpp-seq.so.11 -> libbpp-seq.so.11.0.0
-rw-r--r-- root/root   2610636 2017-07-18 19:01 ./usr/lib/arm-linux-gnueabihf/libbpp-seq.so.11.0.0
drwxr-xr-x root/root         0 2017-07-18 19:01 ./usr/share/
drwxr-xr-x root/root         0 2017-07-18 19:01 ./usr/share/doc/
drwxr-xr-x root/root         0 2017-07-18 19:01 ./usr/share/doc/libbpp-seq11/
-rw-r--r-- root/root      1406 2017-07-18 19:01 ./usr/share/doc/libbpp-seq11/changelog.Debian.gz
-rw-r--r-- root/root      5033 2017-06-07 16:40 ./usr/share/doc/libbpp-seq11/changelog.gz
-rw-r--r-- root/root      3115 2017-07-18 19:01 ./usr/share/doc/libbpp-seq11/copyright


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Build Architecture: armhf
Build-Space: 110296
Build-Time: 435
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 159
Job: libbpp-seq_2.3.1-7
Machine Architecture: armhf
Package: libbpp-seq
Package-Time: 617
Source-Version: 2.3.1-7
Space: 110296
Status: successful
Version: 2.3.1-7
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Finished at 2017-07-24T05:25:14Z
Build needed 00:10:17, 110296k disk space