Build log for libbpp-seq (2.2.0-1) on armhf

libbpp-seq → 2.2.0-1 → armhf → 2016-05-03 13:06:23

sbuild (Debian sbuild) 0.66.0 (04 Oct 2015) on testbuildd.raspbian.org

+==============================================================================+
| libbpp-seq 2.2.0-1 (armhf)                                 03 May 2016 12:26 |
+==============================================================================+

Package: libbpp-seq
Version: 2.2.0-1
Source Version: 2.2.0-1
Distribution: stretch-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'build/libbpp-seq-Wn_ER0/libbpp-seq-2.2.0' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/libbpp-seq-Wn_ER0' with '<<BUILDDIR>>'
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/stretch-staging-armhf-sbuild-c159a545-c1bc-4483-9473-61d583a669c5' with '<<CHROOT>>'

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| Update chroot                                                                |
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Get:1 http://172.17.0.1/private stretch-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private stretch-staging/main Sources [8942 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf Packages [11.0 MB]
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| Fetch source files                                                           |
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Check APT
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Checking available source versions...

Download source files with APT
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Reading package lists...
NOTICE: 'libbpp-seq' packaging is maintained in the 'Git' version control system at:
https://anonscm.debian.org/git/debian-med/libbpp-seq.git
Please use:
git clone https://anonscm.debian.org/git/debian-med/libbpp-seq.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 359 kB of source archives.
Get:1 http://172.17.0.1/private stretch-staging/main libbpp-seq 2.2.0-1 (dsc) [2110 B]
Get:2 http://172.17.0.1/private stretch-staging/main libbpp-seq 2.2.0-1 (tar) [352 kB]
Get:3 http://172.17.0.1/private stretch-staging/main libbpp-seq 2.2.0-1 (diff) [4804 B]
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Check architectures
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Check dependencies
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Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-u3VOtn/apt_archive/sbuild-build-depends-core-dummy.deb'.
OK
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Get:3 file:/<<BUILDDIR>>/resolver-u3VOtn/apt_archive ./ Release.gpg [299 B]
Get:3 file:/<<BUILDDIR>>/resolver-u3VOtn/apt_archive ./ Release.gpg [299 B]
Get:4 file:/<<BUILDDIR>>/resolver-u3VOtn/apt_archive ./ Sources [214 B]
Get:5 file:/<<BUILDDIR>>/resolver-u3VOtn/apt_archive ./ Packages [527 B]
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W: file:///<<BUILDDIR>>/resolver-u3VOtn/apt_archive/./Release.gpg: Signature by key 085A60275B95EE7E758335885FBC947B34E39F26 uses weak digest algorithm (SHA1)
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| Install core build dependencies (apt-based resolver)                         |
+------------------------------------------------------------------------------+

Installing build dependencies
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Building dependency tree...
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The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 39 not upgraded.
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Merged Build-Depends: debhelper (>= 9), cmake, d-shlibs, libbpp-core-dev (>= 2.2.0)
Filtered Build-Depends: debhelper (>= 9), cmake, d-shlibs, libbpp-core-dev (>= 2.2.0)
dpkg-deb: building package 'sbuild-build-depends-libbpp-seq-dummy' in '/<<BUILDDIR>>/resolver-CVYkQR/apt_archive/sbuild-build-depends-libbpp-seq-dummy.deb'.
OK
Get:1 file:/<<BUILDDIR>>/resolver-CVYkQR/apt_archive ./ InRelease
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Get:2 file:/<<BUILDDIR>>/resolver-CVYkQR/apt_archive ./ Release [2119 B]
Get:3 file:/<<BUILDDIR>>/resolver-CVYkQR/apt_archive ./ Release.gpg [299 B]
Get:3 file:/<<BUILDDIR>>/resolver-CVYkQR/apt_archive ./ Release.gpg [299 B]
Get:4 file:/<<BUILDDIR>>/resolver-CVYkQR/apt_archive ./ Sources [239 B]
Get:5 file:/<<BUILDDIR>>/resolver-CVYkQR/apt_archive ./ Packages [557 B]
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W: file:///<<BUILDDIR>>/resolver-CVYkQR/apt_archive/./Release.gpg: Signature by key 085A60275B95EE7E758335885FBC947B34E39F26 uses weak digest algorithm (SHA1)
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+------------------------------------------------------------------------------+
| Install libbpp-seq build dependencies (apt-based resolver)                   |
+------------------------------------------------------------------------------+

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data
  d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism file gettext
  gettext-base groff-base intltool-debian libarchive-zip-perl libarchive13
  libbpp-core-dev libbpp-core2v5 libbsd0 libcroco3 libcurl3 libexpat1 libffi6
  libfile-stripnondeterminism-perl libglib2.0-0 libgnutls30 libgssapi-krb5-2
  libhogweed4 libicu55 libidn11 libjsoncpp1 libk5crypto3 libkeyutils1
  libkrb5-3 libkrb5support0 libldap-2.4-2 liblzo2-2 libmagic1 libnettle6
  libnghttp2-14 libp11-kit0 libpipeline1 librtmp1 libsasl2-2
  libsasl2-modules-db libsigsegv2 libssh2-1 libssl1.0.2 libtasn1-6
  libtimedate-perl libtool libunistring0 libxml2 m4 man-db po-debconf
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
  vacation codeblocks eclipse ninja-build dh-make gettext-doc libasprintf-dev
  libgettextpo-dev groff lrzip gnutls-bin krb5-doc krb5-user libtool-doc
  gfortran | fortran95-compiler gcj-jdk less www-browser libmail-box-perl
Recommended packages:
  curl | wget | lynx-cur ca-certificates libglib2.0-data shared-mime-info
  xdg-user-dirs krb5-locales libsasl2-modules libltdl-dev xml-core
  libmail-sendmail-perl
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data
  d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism file gettext
  gettext-base groff-base intltool-debian libarchive-zip-perl libarchive13
  libbpp-core-dev libbpp-core2v5 libbsd0 libcroco3 libcurl3 libexpat1 libffi6
  libfile-stripnondeterminism-perl libglib2.0-0 libgnutls30 libgssapi-krb5-2
  libhogweed4 libicu55 libidn11 libjsoncpp1 libk5crypto3 libkeyutils1
  libkrb5-3 libkrb5support0 libldap-2.4-2 liblzo2-2 libmagic1 libnettle6
  libnghttp2-14 libp11-kit0 libpipeline1 librtmp1 libsasl2-2
  libsasl2-modules-db libsigsegv2 libssh2-1 libssl1.0.2 libtasn1-6
  libtimedate-perl libtool libunistring0 libxml2 m4 man-db po-debconf
  sbuild-build-depends-libbpp-seq-dummy
0 upgraded, 59 newly installed, 0 to remove and 39 not upgraded.
Need to get 27.9 MB/27.9 MB of archives.
After this operation, 114 MB of additional disk space will be used.
Get:1 file:/<<BUILDDIR>>/resolver-CVYkQR/apt_archive ./ sbuild-build-depends-libbpp-seq-dummy 0.invalid.0 [798 B]
Get:2 http://172.17.0.1/private stretch-staging/main armhf groff-base armhf 1.22.3-7 [1083 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf libbsd0 armhf 0.8.3-1 [89.0 kB]
Get:4 http://172.17.0.1/private stretch-staging/main armhf bsdmainutils armhf 9.0.10 [177 kB]
Get:5 http://172.17.0.1/private stretch-staging/main armhf libpipeline1 armhf 1.4.1-2 [23.7 kB]
Get:6 http://172.17.0.1/private stretch-staging/main armhf man-db armhf 2.7.5-1 [975 kB]
Get:7 http://172.17.0.1/private stretch-staging/main armhf cmake-data all 3.5.2-1 [1131 kB]
Get:8 http://172.17.0.1/private stretch-staging/main armhf liblzo2-2 armhf 2.08-1.2 [47.6 kB]
Get:9 http://172.17.0.1/private stretch-staging/main armhf libnettle6 armhf 3.2-1 [202 kB]
Get:10 http://172.17.0.1/private stretch-staging/main armhf libicu55 armhf 55.1-7 [7380 kB]
Get:11 http://172.17.0.1/private stretch-staging/main armhf libxml2 armhf 2.9.3+dfsg1-1 [800 kB]
Get:12 http://172.17.0.1/private stretch-staging/main armhf libarchive13 armhf 3.1.2-11+b1 [230 kB]
Get:13 http://172.17.0.1/private stretch-staging/main armhf libkeyutils1 armhf 1.5.9-8 [11.5 kB]
Get:14 http://172.17.0.1/private stretch-staging/main armhf libkrb5support0 armhf 1.13.2+dfsg-5 [56.6 kB]
Get:15 http://172.17.0.1/private stretch-staging/main armhf libk5crypto3 armhf 1.13.2+dfsg-5 [110 kB]
Get:16 http://172.17.0.1/private stretch-staging/main armhf libkrb5-3 armhf 1.13.2+dfsg-5 [259 kB]
Get:17 http://172.17.0.1/private stretch-staging/main armhf libgssapi-krb5-2 armhf 1.13.2+dfsg-5 [130 kB]
Get:18 http://172.17.0.1/private stretch-staging/main armhf libidn11 armhf 1.32-3 [110 kB]
Get:19 http://172.17.0.1/private stretch-staging/main armhf libhogweed4 armhf 3.2-1 [126 kB]
Get:20 http://172.17.0.1/private stretch-staging/main armhf libffi6 armhf 3.2.1-4 [18.5 kB]
Get:21 http://172.17.0.1/private stretch-staging/main armhf libp11-kit0 armhf 0.23.2-3 [93.3 kB]
Get:22 http://172.17.0.1/private stretch-staging/main armhf libtasn1-6 armhf 4.8-1 [44.1 kB]
Get:23 http://172.17.0.1/private stretch-staging/main armhf libgnutls30 armhf 3.4.11-4 [718 kB]
Get:24 http://172.17.0.1/private stretch-staging/main armhf libsasl2-modules-db armhf 2.1.26.dfsg1-15 [65.6 kB]
Get:25 http://172.17.0.1/private stretch-staging/main armhf libsasl2-2 armhf 2.1.26.dfsg1-15 [96.7 kB]
Get:26 http://172.17.0.1/private stretch-staging/main armhf libldap-2.4-2 armhf 2.4.42+dfsg-2+rpi1+b2 [198 kB]
Get:27 http://172.17.0.1/private stretch-staging/main armhf libnghttp2-14 armhf 1.9.2-1 [65.7 kB]
Get:28 http://172.17.0.1/private stretch-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d-1+b1 [54.4 kB]
Get:29 http://172.17.0.1/private stretch-staging/main armhf libssh2-1 armhf 1.5.0-2.1 [121 kB]
Get:30 http://172.17.0.1/private stretch-staging/main armhf libssl1.0.2 armhf 1.0.2g-2 [886 kB]
Get:31 http://172.17.0.1/private stretch-staging/main armhf libcurl3 armhf 7.47.0-1 [247 kB]
Get:32 http://172.17.0.1/private stretch-staging/main armhf libexpat1 armhf 2.1.1-1 [60.4 kB]
Get:33 http://172.17.0.1/private stretch-staging/main armhf libjsoncpp1 armhf 1.7.2-1 [65.2 kB]
Get:34 http://172.17.0.1/private stretch-staging/main armhf cmake armhf 3.5.2-1 [2194 kB]
Get:35 http://172.17.0.1/private stretch-staging/main armhf libunistring0 armhf 0.9.3-5.2 [253 kB]
Get:36 http://172.17.0.1/private stretch-staging/main armhf libmagic1 armhf 1:5.25-2 [250 kB]
Get:37 http://172.17.0.1/private stretch-staging/main armhf file armhf 1:5.25-2 [61.2 kB]
Get:38 http://172.17.0.1/private stretch-staging/main armhf gettext-base armhf 0.19.7-2 [111 kB]
Get:39 http://172.17.0.1/private stretch-staging/main armhf libsigsegv2 armhf 2.10-5 [28.4 kB]
Get:40 http://172.17.0.1/private stretch-staging/main armhf m4 armhf 1.4.17-5 [239 kB]
Get:41 http://172.17.0.1/private stretch-staging/main armhf autoconf all 2.69-10 [338 kB]
Get:42 http://172.17.0.1/private stretch-staging/main armhf autotools-dev all 20150820.1 [71.7 kB]
Get:43 http://172.17.0.1/private stretch-staging/main armhf automake all 1:1.15-4 [735 kB]
Get:44 http://172.17.0.1/private stretch-staging/main armhf autopoint all 0.19.7-2 [424 kB]
Get:45 http://172.17.0.1/private stretch-staging/main armhf d-shlibs all 0.74 [17.8 kB]
Get:46 http://172.17.0.1/private stretch-staging/main armhf libglib2.0-0 armhf 2.48.0-1 [2540 kB]
Get:47 http://172.17.0.1/private stretch-staging/main armhf libcroco3 armhf 0.6.11-1 [131 kB]
Get:48 http://172.17.0.1/private stretch-staging/main armhf gettext armhf 0.19.7-2 [1400 kB]
Get:49 http://172.17.0.1/private stretch-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:50 http://172.17.0.1/private stretch-staging/main armhf po-debconf all 1.0.19 [249 kB]
Get:51 http://172.17.0.1/private stretch-staging/main armhf libarchive-zip-perl all 1.57-1 [95.1 kB]
Get:52 http://172.17.0.1/private stretch-staging/main armhf libfile-stripnondeterminism-perl all 0.016-1 [11.9 kB]
Get:53 http://172.17.0.1/private stretch-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:54 http://172.17.0.1/private stretch-staging/main armhf dh-strip-nondeterminism all 0.016-1 [6998 B]
Get:55 http://172.17.0.1/private stretch-staging/main armhf libtool all 2.4.6-0.1 [200 kB]
Get:56 http://172.17.0.1/private stretch-staging/main armhf dh-autoreconf all 12 [15.8 kB]
Get:57 http://172.17.0.1/private stretch-staging/main armhf debhelper all 9.20160403 [800 kB]
Get:58 http://172.17.0.1/private stretch-staging/main armhf libbpp-core2v5 armhf 2.2.0-2 [440 kB]
Get:59 http://172.17.0.1/private stretch-staging/main armhf libbpp-core-dev armhf 2.2.0-2 [1526 kB]
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+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 3.19.0-trunk-armmp armhf (armv7l)
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+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
gpgv: Signature made Thu Apr 21 05:41:32 2016 UTC using RSA key ID D1C646D1
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./libbpp-seq_2.2.0-1.dsc
dpkg-source: info: extracting libbpp-seq in libbpp-seq-2.2.0
dpkg-source: info: unpacking libbpp-seq_2.2.0.orig.tar.gz
dpkg-source: info: unpacking libbpp-seq_2.2.0-1.debian.tar.xz

Check disc space
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Sufficient free space for build

User Environment
----------------

DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LOGNAME=root
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=stretch-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=stretch-staging-armhf-sbuild
SCHROOT_COMMAND=env
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SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=xterm
USER=buildd

dpkg-buildpackage
-----------------

dpkg-buildpackage: source package libbpp-seq
dpkg-buildpackage: source version 2.2.0-1
dpkg-buildpackage: source distribution unstable
 dpkg-source --before-build libbpp-seq-2.2.0
dpkg-buildpackage: host architecture armhf
 fakeroot debian/rules clean
dh clean
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dh build-arch
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	cmake .. -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var
-- The CXX compiler identification is GNU 5.3.1
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
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-- Library bpp-core found here:
   includes : /usr/include
   libraries: /usr/lib/arm-linux-gnueabihf/libbpp-core.so
-- Could NOT find Doxygen (missing:  DOXYGEN_EXECUTABLE) 
-- Configuring done
-- Generating done
CMake Warning:
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    CMAKE_INSTALL_LOCALSTATEDIR
    CMAKE_INSTALL_SYSCONFDIR


-- Build files have been written to: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf
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make[1]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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make -f CMakeFiles/Makefile2 all
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f src/CMakeFiles/bppseq-shared.dir/build.make src/CMakeFiles/bppseq-shared.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/src /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src/CMakeFiles/bppseq-shared.dir/DependInfo.cmake --color=
Scanning dependencies of target bppseq-shared
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make -f src/CMakeFiles/bppseq-shared.dir/build.make src/CMakeFiles/bppseq-shared.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  0%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/DNAToRNA.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++   -Dbppseq_shared_EXPORTS  -Wall -Weffc++ -Wshadow -Wconversion -fPIC   -o CMakeFiles/bppseq-shared.dir/Bpp/Seq/DNAToRNA.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/Seq/DNAToRNA.cpp
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CMakeFiles/bppseq-shared.dir/Bpp/Seq/GeneticCode/MoldMitochondrialGeneticCode.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/AlphabetIndex/BLOSUM50.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/AlphabetIndex/AAIndex1Entry.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/AlphabetIndex/AAIndex2Entry.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/AlphabetIndex/SimpleScore.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Container/AbstractSequenceContainer.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Container/AlignedSequenceContainer.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Container/MapSequenceContainer.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Container/SequenceContainerTools.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Container/SiteContainerExceptions.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Container/SiteContainerTools.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Container/VectorSequenceContainer.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Container/VectorSiteContainer.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Container/CompressedVectorSiteContainer.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Container/SiteContainerIterator.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Container/SequenceContainerIterator.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/Clustal.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/Dcse.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/Fasta.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/Mase.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/MaseTools.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/Phylip.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/IoSequenceFactory.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/GenBank.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/PhredPhd.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/PhredPoly.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/NexusIoSequence.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/NexusTools.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/Stockholm.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/StreamSequenceIterator.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/BppOSequenceReaderFormat.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/BppOSequenceWriterFormat.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/BppOAlignmentReaderFormat.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/BppOAlignmentWriterFormat.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/BppOSequenceStreamReaderFormat.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/BppOAlphabetIndex1Format.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/BppOAlphabetIndex2Format.cpp.o CMakeFiles/bppseq-shared.dir/Bpp/Seq/App/SequenceApplicationTools.cpp.o -lbpp-core 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -E cmake_symlink_library libbpp-seq.so.9.1.3 libbpp-seq.so.9 libbpp-seq.so
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CMakeFiles/bppseq-static.dir/Bpp/Seq/Container/VectorSequenceContainer.cpp.o CMakeFiles/bppseq-static.dir/Bpp/Seq/Container/VectorSiteContainer.cpp.o CMakeFiles/bppseq-static.dir/Bpp/Seq/Container/CompressedVectorSiteContainer.cpp.o CMakeFiles/bppseq-static.dir/Bpp/Seq/Container/SiteContainerIterator.cpp.o CMakeFiles/bppseq-static.dir/Bpp/Seq/Container/SequenceContainerIterator.cpp.o CMakeFiles/bppseq-static.dir/Bpp/Seq/Io/Clustal.cpp.o CMakeFiles/bppseq-static.dir/Bpp/Seq/Io/Dcse.cpp.o CMakeFiles/bppseq-static.dir/Bpp/Seq/Io/Fasta.cpp.o CMakeFiles/bppseq-static.dir/Bpp/Seq/Io/Mase.cpp.o CMakeFiles/bppseq-static.dir/Bpp/Seq/Io/MaseTools.cpp.o CMakeFiles/bppseq-static.dir/Bpp/Seq/Io/Phylip.cpp.o CMakeFiles/bppseq-static.dir/Bpp/Seq/Io/IoSequenceFactory.cpp.o CMakeFiles/bppseq-static.dir/Bpp/Seq/Io/GenBank.cpp.o CMakeFiles/bppseq-static.dir/Bpp/Seq/Io/PhredPhd.cpp.o CMakeFiles/bppseq-static.dir/Bpp/Seq/Io/PhredPoly.cpp.o CMakeFiles/bppseq-static.dir/Bpp/Seq/Io/NexusIoSequence.cpp.o 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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test && /usr/bin/c++    -I/<<PKGBUILDDIR>>/test/../src  -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/test_sequences.dir/test_sequences.cpp.o -c /<<PKGBUILDDIR>>/test/test_sequences.cpp
[ 95%] Linking CXX executable test_sequences
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sequences.dir/link.txt --verbose=1
/usr/bin/c++   -Wall -Weffc++ -Wshadow -Wconversion   -Wl,-z,relro CMakeFiles/test_sequences.dir/test_sequences.cpp.o  -o test_sequences -rdynamic -lbpp-core -L../src -lbpp-seq 
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 95%] Built target test_sequences
make -f test/CMakeFiles/test_alphabets.dir/build.make test/CMakeFiles/test_alphabets.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test/CMakeFiles/test_alphabets.dir/DependInfo.cmake --color=
Scanning dependencies of target test_alphabets
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f test/CMakeFiles/test_alphabets.dir/build.make test/CMakeFiles/test_alphabets.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 95%] Building CXX object test/CMakeFiles/test_alphabets.dir/test_alphabets.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test && /usr/bin/c++    -I/<<PKGBUILDDIR>>/test/../src  -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/test_alphabets.dir/test_alphabets.cpp.o -c /<<PKGBUILDDIR>>/test/test_alphabets.cpp
[ 96%] Linking CXX executable test_alphabets
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_alphabets.dir/link.txt --verbose=1
/usr/bin/c++   -Wall -Weffc++ -Wshadow -Wconversion   -Wl,-z,relro CMakeFiles/test_alphabets.dir/test_alphabets.cpp.o  -o test_alphabets -rdynamic -lbpp-core -L../src -lbpp-seq 
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 96%] Built target test_alphabets
make -f test/CMakeFiles/test_bowker.dir/build.make test/CMakeFiles/test_bowker.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test/CMakeFiles/test_bowker.dir/DependInfo.cmake --color=
Scanning dependencies of target test_bowker
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f test/CMakeFiles/test_bowker.dir/build.make test/CMakeFiles/test_bowker.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 97%] Building CXX object test/CMakeFiles/test_bowker.dir/test_bowker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test && /usr/bin/c++    -I/<<PKGBUILDDIR>>/test/../src  -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/test_bowker.dir/test_bowker.cpp.o -c /<<PKGBUILDDIR>>/test/test_bowker.cpp
[ 97%] Linking CXX executable test_bowker
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_bowker.dir/link.txt --verbose=1
/usr/bin/c++   -Wall -Weffc++ -Wshadow -Wconversion   -Wl,-z,relro CMakeFiles/test_bowker.dir/test_bowker.cpp.o  -o test_bowker -rdynamic -lbpp-core -L../src -lbpp-seq 
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 97%] Built target test_bowker
make -f test/CMakeFiles/test_alignment_scores.dir/build.make test/CMakeFiles/test_alignment_scores.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test/CMakeFiles/test_alignment_scores.dir/DependInfo.cmake --color=
Scanning dependencies of target test_alignment_scores
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f test/CMakeFiles/test_alignment_scores.dir/build.make test/CMakeFiles/test_alignment_scores.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 97%] Building CXX object test/CMakeFiles/test_alignment_scores.dir/test_alignment_scores.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test && /usr/bin/c++    -I/<<PKGBUILDDIR>>/test/../src  -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/test_alignment_scores.dir/test_alignment_scores.cpp.o -c /<<PKGBUILDDIR>>/test/test_alignment_scores.cpp
[ 98%] Linking CXX executable test_alignment_scores
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_alignment_scores.dir/link.txt --verbose=1
/usr/bin/c++   -Wall -Weffc++ -Wshadow -Wconversion   -Wl,-z,relro CMakeFiles/test_alignment_scores.dir/test_alignment_scores.cpp.o  -o test_alignment_scores -rdynamic -lbpp-core -L../src -lbpp-seq 
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 98%] Built target test_alignment_scores
make -f test/CMakeFiles/test_walker.dir/build.make test/CMakeFiles/test_walker.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test/CMakeFiles/test_walker.dir/DependInfo.cmake --color=
Scanning dependencies of target test_walker
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f test/CMakeFiles/test_walker.dir/build.make test/CMakeFiles/test_walker.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 99%] Building CXX object test/CMakeFiles/test_walker.dir/test_walker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test && /usr/bin/c++    -I/<<PKGBUILDDIR>>/test/../src  -Wall -Weffc++ -Wshadow -Wconversion   -o CMakeFiles/test_walker.dir/test_walker.cpp.o -c /<<PKGBUILDDIR>>/test/test_walker.cpp
[100%] Linking CXX executable test_walker
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_walker.dir/link.txt --verbose=1
/usr/bin/c++   -Wall -Weffc++ -Wshadow -Wconversion   -Wl,-z,relro CMakeFiles/test_walker.dir/test_walker.cpp.o  -o test_walker -rdynamic -lbpp-core -L../src -lbpp-seq 
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[100%] Built target test_walker
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles 0
make[1]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
   debian/rules override_dh_auto_test
make[1]: Entering directory '/<<PKGBUILDDIR>>'
# For the moment ignore:
# 3/7 Test #3: test_io ..........................***Exception: Other  0.01 sec
# terminate called after throwing an instance of 'bpp::IOException'
#  what():  Fasta::appendFromStream: can't read from istream input
#
# 86% tests passed, 1 tests failed out of 7
dh_auto_test || true
	make -j1 test ARGS\+=-j1
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Running tests...
/usr/bin/ctest --force-new-ctest-process -j1
Test project /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf
    Start 1: test_alphabets
1/7 Test #1: test_alphabets ...................   Passed    0.06 sec
    Start 2: test_sequences
2/7 Test #2: test_sequences ...................   Passed    0.05 sec
    Start 3: test_io
3/7 Test #3: test_io ..........................***Exception: Other  0.05 sec
terminate called after throwing an instance of 'bpp::IOException'
  what():  Fasta::appendFromStream: can't read from istream input

    Start 4: test_containers
4/7 Test #4: test_containers ..................   Passed    0.06 sec
    Start 5: test_alignment_scores
5/7 Test #5: test_alignment_scores ............   Passed    0.06 sec
    Start 6: test_walker
6/7 Test #6: test_walker ......................   Passed    0.24 sec
    Start 7: test_bowker
7/7 Test #7: test_bowker ......................   Passed  594.30 sec

86% tests passed, 1 tests failed out of 7

Total Test time (real) = 594.85 sec

The following tests FAILED:
	  3 - test_io (OTHER_FAULT)
Errors while running CTest
Makefile:130: recipe for target 'test' failed
make[2]: *** [test] Error 8
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
dh_auto_test: make -j1 test ARGS+=-j1 returned exit code 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
 fakeroot debian/rules binary-arch
dh binary-arch
   dh_testroot -a
   dh_prep -a
   dh_auto_install -a
	make -j1 install DESTDIR=/<<PKGBUILDDIR>>/debian/tmp AM_UPDATE_INFO_DIR=no
make[1]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -H/<<PKGBUILDDIR>> -B/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f src/CMakeFiles/bppseq-shared.dir/build.make src/CMakeFiles/bppseq-shared.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/src /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src/CMakeFiles/bppseq-shared.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f src/CMakeFiles/bppseq-shared.dir/build.make src/CMakeFiles/bppseq-shared.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'src/CMakeFiles/bppseq-shared.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 46%] Built target bppseq-shared
make -f src/CMakeFiles/bppseq-static.dir/build.make src/CMakeFiles/bppseq-static.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/src /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src/CMakeFiles/bppseq-static.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f src/CMakeFiles/bppseq-static.dir/build.make src/CMakeFiles/bppseq-static.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'src/CMakeFiles/bppseq-static.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 92%] Built target bppseq-static
make -f test/CMakeFiles/test_io.dir/build.make test/CMakeFiles/test_io.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test/CMakeFiles/test_io.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f test/CMakeFiles/test_io.dir/build.make test/CMakeFiles/test_io.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'test/CMakeFiles/test_io.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 93%] Built target test_io
make -f test/CMakeFiles/test_containers.dir/build.make test/CMakeFiles/test_containers.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test/CMakeFiles/test_containers.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f test/CMakeFiles/test_containers.dir/build.make test/CMakeFiles/test_containers.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'test/CMakeFiles/test_containers.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 94%] Built target test_containers
make -f test/CMakeFiles/test_sequences.dir/build.make test/CMakeFiles/test_sequences.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test/CMakeFiles/test_sequences.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f test/CMakeFiles/test_sequences.dir/build.make test/CMakeFiles/test_sequences.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'test/CMakeFiles/test_sequences.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 95%] Built target test_sequences
make -f test/CMakeFiles/test_alphabets.dir/build.make test/CMakeFiles/test_alphabets.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test/CMakeFiles/test_alphabets.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f test/CMakeFiles/test_alphabets.dir/build.make test/CMakeFiles/test_alphabets.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'test/CMakeFiles/test_alphabets.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 96%] Built target test_alphabets
make -f test/CMakeFiles/test_bowker.dir/build.make test/CMakeFiles/test_bowker.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test/CMakeFiles/test_bowker.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f test/CMakeFiles/test_bowker.dir/build.make test/CMakeFiles/test_bowker.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'test/CMakeFiles/test_bowker.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 97%] Built target test_bowker
make -f test/CMakeFiles/test_alignment_scores.dir/build.make test/CMakeFiles/test_alignment_scores.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test/CMakeFiles/test_alignment_scores.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f test/CMakeFiles/test_alignment_scores.dir/build.make test/CMakeFiles/test_alignment_scores.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'test/CMakeFiles/test_alignment_scores.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 98%] Built target test_alignment_scores
make -f test/CMakeFiles/test_walker.dir/build.make test/CMakeFiles/test_walker.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test/CMakeFiles/test_walker.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f test/CMakeFiles/test_walker.dir/build.make test/CMakeFiles/test_walker.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'test/CMakeFiles/test_walker.dir/build'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[100%] Built target test_walker
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles 0
make -f CMakeFiles/Makefile2 preinstall
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[2]: Nothing to be done for 'preinstall'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libbpp-seq.a
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libbpp-seq.so.9.1.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libbpp-seq.so.9
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libbpp-seq.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container/SiteContainerTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container/SequenceContainer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container/SequenceContainerIterator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container/SequenceContainerTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container/VectorSiteContainer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container/SiteContainer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container/AlignedSequenceContainer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container/MapSequenceContainer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container/SiteContainerExceptions.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container/OrderedSequenceContainer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container/SequenceContainerExceptions.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container/VectorSequenceContainer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container/CompressedVectorSiteContainer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container/AbstractSequenceContainer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Container/SiteContainerIterator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/SiteIterator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/SiteExceptions.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/SequenceWithQuality.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/CodonSiteTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/App
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/App/SequenceApplicationTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/ISequenceStream.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/BppOAlignmentWriterFormat.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/SequenceFileIndex.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/Dcse.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/IoSequenceStream.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/BppOAlphabetIndex2Format.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/Mase.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/AbstractOAlignment.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/NexusTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/AbstractISequence.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/GenBank.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/Stockholm.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/IoSequence.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/PhredPhd.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/BppOAlignmentReaderFormat.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/OSequenceStream.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/BppOSequenceWriterFormat.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/OSequence.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/Clustal.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/Fasta.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/NexusIoSequence.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/BppOAlphabetIndex1Format.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/BppOSequenceStreamReaderFormat.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/AbstractIAlignment.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/PhredPoly.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/AbstractOSequence.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/IoSequenceFactory.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/ISequence.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/Phylip.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/StreamSequenceIterator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/MaseTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Io/BppOSequenceReaderFormat.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/SequenceExceptions.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/SymbolList.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/DNAToRNA.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/SequencePositionIterators.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Site.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/SequenceWithAnnotationTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/SequenceWithAnnotation.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Transliterator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/StringSequenceTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/SequenceWalker.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/NucleicAlphabetState.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/AlphabetNumericState.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/ProteicAlphabet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/NucleicAlphabet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/AlphabetTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/DNA.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/CodonAlphabet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/WordAlphabet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/AbstractAlphabet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/BinaryAlphabet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/IntegerAlphabet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/NumericAlphabet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/RNA.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/AlphabetState.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/Alphabet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/LetterAlphabet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/RNY.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/DefaultAlphabet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/AlphabetExceptions.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/ProteicAlphabetState.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Alphabet/CaseMaskedAlphabet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/SiteTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/Sequence.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/AAChargeIndex.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/AlphabetIndex1.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/AAVolumeIndex.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/BLOSUM50.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/AAChouFasmanTurnIndex.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/SimpleScore.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/AASEAInf10Index.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/AAChenGuHuangHydrophobicityIndex.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/KleinAANetChargeIndex.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/AAMassIndex.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/UserAlphabetIndex1.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/AAIndex1Entry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/AASEA1030Index.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/AAChouFasmanBSheetIndex.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/AASurfaceIndex.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/SimpleIndexDistance.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/GranthamAAVolumeIndex.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/AAChouFasmanAHelixIndex.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/GranthamAAPolarityIndex.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/AlphabetIndex/AASEASup30Index.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/SequenceIterator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/SequenceWithQualityTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/SequenceTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/NucleicAcidsReplication.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/SymbolListTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/DistanceMatrix.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/GeneticCode
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/GeneticCode/VertebrateMitochondrialGeneticCode.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/GeneticCode/AscidianMitochondrialGeneticCode.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/GeneticCode/StandardGeneticCode.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/GeneticCode/MoldMitochondrialGeneticCode.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/GeneticCode/EchinodermMitochondrialGeneticCode.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/GeneticCode/GeneticCode.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/GeneticCode/InvertebrateMitochondrialGeneticCode.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Seq/GeneticCode/YeastMitochondrialGeneticCode.h
-- Creating generic include file: /usr/include/Bpp.all
-- Creating generic include file: /usr/include/Bpp/App.all
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-- Creating generic include file: /usr/include/Bpp/Graph.all
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-- Creating generic include file: /usr/include/Bpp/Graphics.all
-- Creating generic include file: /usr/include/Bpp/Graphics/Fig.all
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-- Creating generic include file: /usr/include/Bpp/Graphics/Font.all
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-- Creating generic include file: /usr/include/Bpp/Graphics/Latex.all
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-- Creating generic include file: /usr/include/Bpp/Graphics/Molscript.all
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-- Creating generic include file: /usr/include/Bpp/Graphics/R.all
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-- Creating generic include file: /usr/include/Bpp/Graphics/Svg.all
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-- Creating generic include file: /usr/include/Bpp/Io.all
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-- Creating generic include file: /usr/include/Bpp/Numeric.all
-- Creating generic include file: /usr/include/Bpp/Numeric/Function.all
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-- Creating generic include file: /usr/include/Bpp/Numeric/Hmm.all
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-- Creating generic include file: /usr/include/Bpp/Numeric/Matrix.all
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-- Creating generic include file: /usr/include/Bpp/Numeric/Prob.all
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-- Creating generic include file: /usr/include/Bpp/Numeric/Random.all
rm: cannot remove '/usr/include/Bpp/Numeric/Random.all': Permission denied
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-- Creating generic include file: /usr/include/Bpp/Numeric/Stat.all
-- Creating generic include file: /usr/include/Bpp/Numeric/Stat/Mva.all
rm: cannot remove '/usr/include/Bpp/Numeric/Stat/Mva.all': Permission denied
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rm: cannot remove '/usr/include/Bpp/Numeric/Stat.all': Permission denied
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-- Creating generic include file: /usr/include/Bpp/Text.all
rm: cannot remove '/usr/include/Bpp/Text.all': Permission denied
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-- Creating generic include file: /usr/include/Bpp/Utils.all
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make[1]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
   debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_install
d-shlibmove --commit \
	    --multiarch \
	    --v5 \
	    --devunversioned \
	    --override s/libbpp-core2-dev/libbpp-core-dev/ \
	    --exclude-la \
                    --movedev debian/tmp/usr/include/* usr/include \
                    debian/tmp/usr/lib/*.so
Library package automatic movement utility
 --> libbpp-core-dev package exists.
set -e
install -d -m 755 debian/libbpp-seq-dev/usr/lib/arm-linux-gnueabihf
install -d -m 755 debian/libbpp-seq9v5/usr/lib/arm-linux-gnueabihf
mv debian/tmp/usr/lib/libbpp-seq.a debian/libbpp-seq-dev/usr/lib/arm-linux-gnueabihf
mv debian/tmp/usr/lib/libbpp-seq.so debian/libbpp-seq-dev/usr/lib/arm-linux-gnueabihf
mv /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libbpp-seq.so.9 debian/libbpp-seq9v5/usr/lib/arm-linux-gnueabihf
mv /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libbpp-seq.so.9.1.3 debian/libbpp-seq9v5/usr/lib/arm-linux-gnueabihf
PKGDEV=libbpp-seq-dev
PKGSHL=libbpp-seq9v5
install -d -m 755 debian/libbpp-seq-dev/usr/include
mv debian/tmp/usr/include/Bpp debian/libbpp-seq-dev/usr/include
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_installdocs -a
   dh_installchangelogs -a
   dh_perl -a
   dh_link -a
   dh_strip_nondeterminism -a
   dh_compress -a
   dh_fixperms -a
   dh_strip -a
   dh_makeshlibs -a
   dh_shlibdeps -a
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libbpp-seq9v5/usr/lib/arm-linux-gnueabihf/libbpp-seq.so.9.1.3 found in none of the libraries
   dh_installdeb -a
   dh_gencontrol -a
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: package libbpp-seq-dev: unused substitution variable ${devlibs:Depends}
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
   dh_md5sums -a
   dh_builddeb -a
dpkg-deb: building package 'libbpp-seq9v5-dbgsym' in '../libbpp-seq9v5-dbgsym_2.2.0-1_armhf.deb'.
dpkg-deb: building package 'libbpp-seq-dev' in '../libbpp-seq-dev_2.2.0-1_armhf.deb'.
dpkg-deb: building package 'libbpp-seq9v5' in '../libbpp-seq9v5_2.2.0-1_armhf.deb'.
 dpkg-genchanges -B -mRaspbian nitrogen6x test autobuilder <root@raspbian.org> >../libbpp-seq_2.2.0-1_armhf.changes
dpkg-genchanges: warning: package libbpp-seq9v5-dbgsym listed in files list but not in control info
dpkg-genchanges: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build libbpp-seq-2.2.0
dpkg-buildpackage: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 20160503-1303

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Post Build Chroot                                                            |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


libbpp-seq_2.2.0-1_armhf.changes:
---------------------------------

Format: 1.8
Date: Wed, 13 Apr 2016 15:17:21 +0200
Source: libbpp-seq
Binary: libbpp-seq-dev libbpp-seq9v5
Architecture: armhf
Version: 2.2.0-1
Distribution: stretch-staging
Urgency: medium
Maintainer: Raspbian nitrogen6x test autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 libbpp-seq-dev - Bio++ Sequence library development files
 libbpp-seq9v5 - Bio++ Sequence library
Closes: 791099
Changes:
 libbpp-seq (2.2.0-1) unstable; urgency=medium
 .
   * New upstream version
   * Packaging moved to Git
   * Better description
   * Team maintenance in Debian Med team
   * Add watch file
   * debhelper 9
   * DEP5
   * short dh rules file using d-shlibs
   * Library transition
     Closes: #791099
Checksums-Sha1:
 81c17b54b89a39134db8fd6aeab54ce118308212 1523948 libbpp-seq-dev_2.2.0-1_armhf.deb
 b975a9ce323a3aacba916f34396cd1557eb13191 114874 libbpp-seq9v5-dbgsym_2.2.0-1_armhf.deb
 09ceb29fdb39c977cbbbcc85504e9fd15dc48f11 400780 libbpp-seq9v5_2.2.0-1_armhf.deb
Checksums-Sha256:
 2f33add9c310b1f998f1c7c4b9b429c598acdf313bdfd4d7c62202a6b27e10f3 1523948 libbpp-seq-dev_2.2.0-1_armhf.deb
 408a4b570050db7b37db0ff89fb22c1dc9f1f68c5f95e741fe635f8fc01115dd 114874 libbpp-seq9v5-dbgsym_2.2.0-1_armhf.deb
 0712e34e6e879c5c1c87f5c2c6a1d724665ea5a43e81e9585242439f2d4abecf 400780 libbpp-seq9v5_2.2.0-1_armhf.deb
Files:
 8f0158d61b7024b4add65ed8b3bc0be1 1523948 libdevel optional libbpp-seq-dev_2.2.0-1_armhf.deb
 ce3bd6c2c1e01c9444253d5916c7fc11 114874 debug extra libbpp-seq9v5-dbgsym_2.2.0-1_armhf.deb
 904c970689c6b31b220579839228e57b 400780 libs optional libbpp-seq9v5_2.2.0-1_armhf.deb

+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


libbpp-seq-dev_2.2.0-1_armhf.deb
--------------------------------

 new debian package, version 2.0.
 size 1523948 bytes: control archive=5211 bytes.
     869 bytes,    19 lines      control              
   10372 bytes,   128 lines      md5sums              
    1063 bytes,    57 lines   *  postinst             #!/bin/bash
    1134 bytes,    59 lines   *  postrm               #!/bin/bash
     644 bytes,    41 lines   *  prerm                #!/bin/bash
 Package: libbpp-seq-dev
 Source: libbpp-seq
 Version: 2.2.0-1
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 23184
 Depends: libbpp-seq9v5 (= 2.2.0-1), libbpp-core-dev (>= 2.2.0)
 Section: libdevel
 Priority: optional
 Homepage: http://biopp.univ-montp2.fr/wiki/index.php/Main_Page
 Description: Bio++ Sequence library development files
  Bio++ is a set of C++ libraries for Bioinformatics, including sequence
  analysis, phylogenetics, molecular evolution and population genetics.
  Bio++ is Object Oriented and is designed to be both easy to use and
  computer efficient. Bio++ intends to help programmers to write computer
  expensive programs, by providing them a set of re-usable tools.
  .
  This package contains the static library and the header files of Bio++
  classes for sequence analysis classes.

drwxr-xr-x root/root         0 2016-05-03 13:02 ./
drwxr-xr-x root/root         0 2016-05-03 13:01 ./usr/
drwxr-xr-x root/root         0 2016-05-03 13:01 ./usr/include/
drwxr-xr-x root/root         0 2016-05-03 13:01 ./usr/include/Bpp/
drwxr-xr-x root/root         0 2016-05-03 13:01 ./usr/include/Bpp/Seq/
drwxr-xr-x root/root         0 2016-05-03 13:01 ./usr/include/Bpp/Seq/Alphabet/
-rw-r--r-- root/root      9348 2014-09-18 07:40 ./usr/include/Bpp/Seq/Alphabet/AbstractAlphabet.h
-rw-r--r-- root/root     17226 2014-09-16 12:53 ./usr/include/Bpp/Seq/Alphabet/Alphabet.h
-rw-r--r-- root/root      6291 2014-08-07 14:29 ./usr/include/Bpp/Seq/Alphabet/AlphabetExceptions.h
-rw-r--r-- root/root      2887 2014-08-07 14:29 ./usr/include/Bpp/Seq/Alphabet/AlphabetNumericState.h
-rw-r--r-- root/root      3890 2014-08-07 14:29 ./usr/include/Bpp/Seq/Alphabet/AlphabetState.h
-rw-r--r-- root/root      8315 2014-08-07 14:29 ./usr/include/Bpp/Seq/Alphabet/AlphabetTools.h
-rw-r--r-- root/root      2753 2014-08-07 14:29 ./usr/include/Bpp/Seq/Alphabet/BinaryAlphabet.h
-rw-r--r-- root/root      4573 2014-08-07 14:29 ./usr/include/Bpp/Seq/Alphabet/CaseMaskedAlphabet.h
-rw-r--r-- root/root      6352 2014-08-07 14:29 ./usr/include/Bpp/Seq/Alphabet/CodonAlphabet.h
-rw-r--r-- root/root      3190 2014-08-07 14:29 ./usr/include/Bpp/Seq/Alphabet/DNA.h
-rw-r--r-- root/root      3111 2014-08-07 14:29 ./usr/include/Bpp/Seq/Alphabet/DefaultAlphabet.h
-rw-r--r-- root/root      2993 2014-08-07 14:29 ./usr/include/Bpp/Seq/Alphabet/IntegerAlphabet.h
-rw-r--r-- root/root      4236 2014-08-07 14:29 ./usr/include/Bpp/Seq/Alphabet/LetterAlphabet.h
-rw-r--r-- root/root      8961 2014-09-18 07:40 ./usr/include/Bpp/Seq/Alphabet/NucleicAlphabet.h
-rw-r--r-- root/root      4181 2014-08-07 14:29 ./usr/include/Bpp/Seq/Alphabet/NucleicAlphabetState.h
-rw-r--r-- root/root      3971 2014-09-18 07:40 ./usr/include/Bpp/Seq/Alphabet/NumericAlphabet.h
-rw-r--r-- root/root      4921 2014-08-07 14:29 ./usr/include/Bpp/Seq/Alphabet/ProteicAlphabet.h
-rw-r--r-- root/root      2784 2014-08-07 14:29 ./usr/include/Bpp/Seq/Alphabet/ProteicAlphabetState.h
-rw-r--r-- root/root      3139 2014-08-07 14:29 ./usr/include/Bpp/Seq/Alphabet/RNA.h
-rw-r--r-- root/root      4229 2014-08-07 14:29 ./usr/include/Bpp/Seq/Alphabet/RNY.h
-rw-r--r-- root/root     10917 2014-08-07 14:29 ./usr/include/Bpp/Seq/Alphabet/WordAlphabet.h
drwxr-xr-x root/root         0 2016-05-03 13:01 ./usr/include/Bpp/Seq/AlphabetIndex/
-rw-r--r-- root/root      5112 2014-08-07 14:29 ./usr/include/Bpp/Seq/AlphabetIndex/AAChargeIndex.h
-rw-r--r-- root/root      4349 2014-08-07 14:29 ./usr/include/Bpp/Seq/AlphabetIndex/AAChenGuHuangHydrophobicityIndex.h
-rw-r--r-- root/root      3698 2014-08-07 14:29 ./usr/include/Bpp/Seq/AlphabetIndex/AAChouFasmanAHelixIndex.h
-rw-r--r-- root/root      3696 2014-08-07 14:29 ./usr/include/Bpp/Seq/AlphabetIndex/AAChouFasmanBSheetIndex.h
-rw-r--r-- root/root      3619 2014-08-07 14:29 ./usr/include/Bpp/Seq/AlphabetIndex/AAChouFasmanTurnIndex.h
-rw-r--r-- root/root      3340 2014-08-07 14:29 ./usr/include/Bpp/Seq/AlphabetIndex/AAIndex1Entry.h
-rw-r--r-- root/root      3982 2014-08-07 14:29 ./usr/include/Bpp/Seq/AlphabetIndex/AAIndex2Entry.h
-rw-r--r-- root/root      3533 2014-08-07 14:29 ./usr/include/Bpp/Seq/AlphabetIndex/AAMassIndex.h
-rw-r--r-- root/root      3698 2014-08-07 14:29 ./usr/include/Bpp/Seq/AlphabetIndex/AASEA1030Index.h
-rw-r--r-- root/root      3725 2014-08-07 14:29 ./usr/include/Bpp/Seq/AlphabetIndex/AASEAInf10Index.h
-rw-r--r-- root/root      3724 2014-08-07 14:29 ./usr/include/Bpp/Seq/AlphabetIndex/AASEASup30Index.h
-rw-r--r-- root/root      3593 2014-08-07 14:29 ./usr/include/Bpp/Seq/AlphabetIndex/AASurfaceIndex.h
-rw-r--r-- root/root      3562 2014-08-07 14:29 ./usr/include/Bpp/Seq/AlphabetIndex/AAVolumeIndex.h
-rw-r--r-- root/root      3083 2014-08-07 14:29 ./usr/include/Bpp/Seq/AlphabetIndex/AlphabetIndex1.h
-rw-r--r-- root/root      3416 2014-08-07 15:24 ./usr/include/Bpp/Seq/AlphabetIndex/AlphabetIndex2.h
-rw-r--r-- root/root      3275 2014-08-07 15:24 ./usr/include/Bpp/Seq/AlphabetIndex/BLOSUM50.h
-rw-r--r-- root/root      3610 2014-08-07 14:29 ./usr/include/Bpp/Seq/AlphabetIndex/DefaultNucleotideScore.h
-rw-r--r-- root/root      5580 2014-08-07 14:29 ./usr/include/Bpp/Seq/AlphabetIndex/GranthamAAChemicalDistance.h
-rw-r--r-- root/root      4145 2014-08-07 14:29 ./usr/include/Bpp/Seq/AlphabetIndex/GranthamAAPolarityIndex.h
-rw-r--r-- root/root      4106 2014-08-07 14:29 ./usr/include/Bpp/Seq/AlphabetIndex/GranthamAAVolumeIndex.h
-rw-r--r-- root/root      4137 2014-08-07 14:29 ./usr/include/Bpp/Seq/AlphabetIndex/KleinAANetChargeIndex.h
-rw-r--r-- root/root      3730 2014-08-07 14:29 ./usr/include/Bpp/Seq/AlphabetIndex/MiyataAAChemicalDistance.h
-rw-r--r-- root/root      4236 2014-08-07 14:29 ./usr/include/Bpp/Seq/AlphabetIndex/SimpleIndexDistance.h
-rw-r--r-- root/root      3341 2014-08-07 14:29 ./usr/include/Bpp/Seq/AlphabetIndex/SimpleScore.h
-rw-r--r-- root/root      3212 2014-08-08 07:35 ./usr/include/Bpp/Seq/AlphabetIndex/UserAlphabetIndex1.h
drwxr-xr-x root/root         0 2016-05-03 13:01 ./usr/include/Bpp/Seq/App/
-rw-r--r-- root/root     12110 2014-08-07 14:29 ./usr/include/Bpp/Seq/App/SequenceApplicationTools.h
-rw-r--r-- root/root     13733 2014-08-07 14:29 ./usr/include/Bpp/Seq/CodonSiteTools.h
drwxr-xr-x root/root         0 2016-05-03 13:01 ./usr/include/Bpp/Seq/Container/
-rw-r--r-- root/root      5539 2014-08-07 14:29 ./usr/include/Bpp/Seq/Container/AbstractSequenceContainer.h
-rw-r--r-- root/root      7470 2014-08-07 14:29 ./usr/include/Bpp/Seq/Container/AlignedSequenceContainer.h
-rw-r--r-- root/root     12860 2014-08-07 14:29 ./usr/include/Bpp/Seq/Container/CompressedVectorSiteContainer.h
-rw-r--r-- root/root      8707 2014-08-07 14:29 ./usr/include/Bpp/Seq/Container/MapSequenceContainer.h
-rw-r--r-- root/root      9996 2014-08-07 14:29 ./usr/include/Bpp/Seq/Container/OrderedSequenceContainer.h
-rw-r--r-- root/root     11798 2014-08-07 14:29 ./usr/include/Bpp/Seq/Container/SequenceContainer.h
-rw-r--r-- root/root      4361 2014-08-07 14:29 ./usr/include/Bpp/Seq/Container/SequenceContainerExceptions.h
-rw-r--r-- root/root      3137 2014-08-07 14:29 ./usr/include/Bpp/Seq/Container/SequenceContainerIterator.h
-rw-r--r-- root/root     12790 2014-08-07 14:29 ./usr/include/Bpp/Seq/Container/SequenceContainerTools.h
-rw-r--r-- root/root      6991 2014-08-07 14:29 ./usr/include/Bpp/Seq/Container/SiteContainer.h
-rw-r--r-- root/root      2944 2014-08-07 14:29 ./usr/include/Bpp/Seq/Container/SiteContainerExceptions.h
-rw-r--r-- root/root      3884 2014-08-07 14:29 ./usr/include/Bpp/Seq/Container/SiteContainerIterator.h
-rw-r--r-- root/root     23339 2014-08-07 14:29 ./usr/include/Bpp/Seq/Container/SiteContainerTools.h
-rw-r--r-- root/root     10412 2014-08-07 14:29 ./usr/include/Bpp/Seq/Container/VectorSequenceContainer.h
-rw-r--r-- root/root     10253 2014-08-07 14:29 ./usr/include/Bpp/Seq/Container/VectorSiteContainer.h
-rw-r--r-- root/root      3378 2014-08-07 14:29 ./usr/include/Bpp/Seq/DNAToRNA.h
-rw-r--r-- root/root      7293 2014-08-07 14:29 ./usr/include/Bpp/Seq/DistanceMatrix.h
drwxr-xr-x root/root         0 2016-05-03 13:01 ./usr/include/Bpp/Seq/GeneticCode/
-rw-r--r-- root/root      3711 2014-08-07 14:29 ./usr/include/Bpp/Seq/GeneticCode/AscidianMitochondrialGeneticCode.h
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-rw-r--r-- root/root      3540 2014-08-07 14:29 ./usr/include/Bpp/Seq/GeneticCode/YeastMitochondrialGeneticCode.h
drwxr-xr-x root/root         0 2016-05-03 13:01 ./usr/include/Bpp/Seq/Io/
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-rw-r--r-- root/root      2667 2014-08-07 14:29 ./usr/include/Bpp/Seq/Io/AbstractOAlignment.h
-rw-r--r-- root/root      3465 2014-08-07 14:29 ./usr/include/Bpp/Seq/Io/AbstractOSequence.h
-rw-r--r-- root/root      3340 2014-08-07 14:29 ./usr/include/Bpp/Seq/Io/BppOAlignmentReaderFormat.h
-rw-r--r-- root/root      3350 2014-08-26 07:06 ./usr/include/Bpp/Seq/Io/BppOAlignmentWriterFormat.h
-rw-r--r-- root/root      3968 2014-08-07 14:29 ./usr/include/Bpp/Seq/Io/BppOAlphabetIndex1Format.h
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-rw-r--r-- root/root      3329 2014-08-07 14:29 ./usr/include/Bpp/Seq/Io/BppOSequenceReaderFormat.h
-rw-r--r-- root/root      3357 2014-08-07 14:29 ./usr/include/Bpp/Seq/Io/BppOSequenceStreamReaderFormat.h
-rw-r--r-- root/root      3331 2014-08-26 07:06 ./usr/include/Bpp/Seq/Io/BppOSequenceWriterFormat.h
-rw-r--r-- root/root      4860 2014-08-07 14:29 ./usr/include/Bpp/Seq/Io/Clustal.h
-rw-r--r-- root/root      3306 2014-08-07 14:29 ./usr/include/Bpp/Seq/Io/Dcse.h
-rw-r--r-- root/root      7073 2014-08-07 14:29 ./usr/include/Bpp/Seq/Io/Fasta.h
-rw-r--r-- root/root      2716 2014-08-07 14:29 ./usr/include/Bpp/Seq/Io/GenBank.h
-rw-r--r-- root/root      4331 2014-08-07 14:29 ./usr/include/Bpp/Seq/Io/ISequence.h
-rw-r--r-- root/root      2594 2014-08-07 14:29 ./usr/include/Bpp/Seq/Io/ISequenceStream.h
-rw-r--r-- root/root      2156 2014-08-07 14:29 ./usr/include/Bpp/Seq/Io/IoSequence.h
-rw-r--r-- root/root      4364 2014-08-07 14:29 ./usr/include/Bpp/Seq/Io/IoSequenceFactory.h
-rw-r--r-- root/root      2057 2014-08-07 14:29 ./usr/include/Bpp/Seq/Io/IoSequenceStream.h
-rw-r--r-- root/root      8650 2014-08-07 14:29 ./usr/include/Bpp/Seq/Io/Mase.h
-rw-r--r-- root/root      6002 2014-08-07 14:29 ./usr/include/Bpp/Seq/Io/MaseTools.h
-rw-r--r-- root/root      4795 2014-08-07 14:29 ./usr/include/Bpp/Seq/Io/NexusIoSequence.h
-rw-r--r-- root/root      2981 2014-08-07 14:29 ./usr/include/Bpp/Seq/Io/NexusTools.h
-rw-r--r-- root/root      4356 2014-08-07 14:29 ./usr/include/Bpp/Seq/Io/OSequence.h
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-rw-r--r-- root/root      4909 2014-08-07 14:29 ./usr/include/Bpp/Seq/Io/PhredPhd.h
-rw-r--r-- root/root      2936 2014-08-07 14:29 ./usr/include/Bpp/Seq/Io/PhredPoly.h
-rw-r--r-- root/root      6835 2014-08-07 14:29 ./usr/include/Bpp/Seq/Io/Phylip.h
-rw-r--r-- root/root      2625 2014-08-07 14:29 ./usr/include/Bpp/Seq/Io/SequenceFileIndex.h
-rw-r--r-- root/root      3788 2014-08-07 14:29 ./usr/include/Bpp/Seq/Io/Stockholm.h
-rw-r--r-- root/root      4174 2014-08-07 14:29 ./usr/include/Bpp/Seq/Io/StreamSequenceIterator.h
-rw-r--r-- root/root      3717 2014-08-07 14:29 ./usr/include/Bpp/Seq/NucleicAcidsReplication.h
-rw-r--r-- root/root     14985 2014-08-07 14:29 ./usr/include/Bpp/Seq/Sequence.h
-rw-r--r-- root/root      4598 2014-08-07 14:29 ./usr/include/Bpp/Seq/SequenceExceptions.h
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-rw-r--r-- root/root      2926 2014-08-07 14:29 ./usr/include/Bpp/Seq/SequenceWalker.h
-rw-r--r-- root/root     15712 2014-08-07 14:29 ./usr/include/Bpp/Seq/SequenceWithAnnotation.h
-rw-r--r-- root/root      7151 2014-08-07 14:29 ./usr/include/Bpp/Seq/SequenceWithAnnotationTools.h
-rw-r--r-- root/root     26948 2014-08-07 14:29 ./usr/include/Bpp/Seq/SequenceWithQuality.h
-rw-r--r-- root/root      6313 2014-08-07 14:29 ./usr/include/Bpp/Seq/SequenceWithQualityTools.h
-rw-r--r-- root/root      5857 2014-08-07 14:29 ./usr/include/Bpp/Seq/Site.h
-rw-r--r-- root/root      3355 2014-08-07 14:29 ./usr/include/Bpp/Seq/SiteExceptions.h
-rw-r--r-- root/root      2354 2014-08-07 14:29 ./usr/include/Bpp/Seq/SiteIterator.h
-rw-r--r-- root/root      8551 2014-08-07 14:29 ./usr/include/Bpp/Seq/SiteTools.h
-rw-r--r-- root/root      7669 2014-08-07 14:29 ./usr/include/Bpp/Seq/StringSequenceTools.h
-rw-r--r-- root/root     23092 2014-08-07 14:29 ./usr/include/Bpp/Seq/SymbolList.h
-rw-r--r-- root/root      8435 2014-09-19 07:58 ./usr/include/Bpp/Seq/SymbolListTools.h
-rw-r--r-- root/root      6927 2014-08-07 14:29 ./usr/include/Bpp/Seq/Transliterator.h
drwxr-xr-x root/root         0 2016-05-03 13:01 ./usr/lib/
drwxr-xr-x root/root         0 2016-05-03 13:01 ./usr/lib/arm-linux-gnueabihf/
-rw-r--r-- root/root  22914618 2016-05-03 13:01 ./usr/lib/arm-linux-gnueabihf/libbpp-seq.a
lrwxrwxrwx root/root         0 2016-05-03 13:01 ./usr/lib/arm-linux-gnueabihf/libbpp-seq.so -> libbpp-seq.so.9
drwxr-xr-x root/root         0 2016-05-03 13:01 ./usr/share/
drwxr-xr-x root/root         0 2016-05-03 13:01 ./usr/share/doc/
drwxr-xr-x root/root         0 2016-05-03 13:01 ./usr/share/doc/libbpp-seq-dev/
-rw-r--r-- root/root       909 2016-04-21 05:36 ./usr/share/doc/libbpp-seq-dev/changelog.Debian.gz
-rw-r--r-- root/root      4892 2014-09-23 14:51 ./usr/share/doc/libbpp-seq-dev/changelog.gz
-rw-r--r-- root/root      3115 2016-04-21 05:36 ./usr/share/doc/libbpp-seq-dev/copyright


libbpp-seq9v5-dbgsym_2.2.0-1_armhf.deb
--------------------------------------

 new debian package, version 2.0.
 size 114874 bytes: control archive=526 bytes.
     468 bytes,    14 lines      control              
     106 bytes,     1 lines      md5sums              
 Package: libbpp-seq9v5-dbgsym
 Source: libbpp-seq
 Version: 2.2.0-1
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 867
 Depends: libbpp-seq9v5 (= 2.2.0-1)
 Section: debug
 Priority: extra
 Multi-Arch: same
 Homepage: http://biopp.univ-montp2.fr/wiki/index.php/Main_Page
 Description: Debug symbols for libbpp-seq9v5
 Auto-Built-Package: debug-symbols
 Build-Ids: 6e99e9cfb296eda9037ae7ba3d31880449b177ad

drwxr-xr-x root/root         0 2016-05-03 13:02 ./
drwxr-xr-x root/root         0 2016-05-03 13:01 ./usr/
drwxr-xr-x root/root         0 2016-05-03 13:01 ./usr/lib/
drwxr-xr-x root/root         0 2016-05-03 13:01 ./usr/lib/debug/
drwxr-xr-x root/root         0 2016-05-03 13:01 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2016-05-03 13:01 ./usr/lib/debug/.build-id/6e/
-rw-r--r-- root/root    876640 2016-05-03 13:01 ./usr/lib/debug/.build-id/6e/99e9cfb296eda9037ae7ba3d31880449b177ad.debug
drwxr-xr-x root/root         0 2016-05-03 13:01 ./usr/share/
drwxr-xr-x root/root         0 2016-05-03 13:01 ./usr/share/doc/
lrwxrwxrwx root/root         0 2016-05-03 13:01 ./usr/share/doc/libbpp-seq9v5-dbgsym -> libbpp-seq9v5


libbpp-seq9v5_2.2.0-1_armhf.deb
-------------------------------

 new debian package, version 2.0.
 size 400780 bytes: control archive=948 bytes.
     888 bytes,    21 lines      control              
     311 bytes,     4 lines      md5sums              
      27 bytes,     1 lines      shlibs               
      60 bytes,     2 lines      triggers             
 Package: libbpp-seq9v5
 Source: libbpp-seq
 Version: 2.2.0-1
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 2396
 Depends: libbpp-core2v5 (>= 2.2.0), libc6 (>= 2.4), libgcc1 (>= 1:4.0), libstdc++6 (>= 5.2)
 Conflicts: libbpp-seq9
 Replaces: libbpp-seq9
 Section: libs
 Priority: optional
 Multi-Arch: same
 Homepage: http://biopp.univ-montp2.fr/wiki/index.php/Main_Page
 Description: Bio++ Sequence library
  Bio++ is a set of C++ libraries for Bioinformatics, including sequence
  analysis, phylogenetics, molecular evolution and population genetics.
  Bio++ is Object Oriented and is designed to be both easy to use and
  computer efficient. Bio++ intends to help programmers to write computer
  expensive programs, by providing them a set of re-usable tools.
  .
  This package contains the Bio++ classes for sequence analysis.

drwxr-xr-x root/root         0 2016-05-03 13:01 ./
drwxr-xr-x root/root         0 2016-05-03 13:01 ./usr/
drwxr-xr-x root/root         0 2016-05-03 13:01 ./usr/lib/
drwxr-xr-x root/root         0 2016-05-03 13:01 ./usr/lib/arm-linux-gnueabihf/
lrwxrwxrwx root/root         0 2016-05-03 13:01 ./usr/lib/arm-linux-gnueabihf/libbpp-seq.so.9 -> libbpp-seq.so.9.1.3
-rw-r--r-- root/root   2431716 2016-05-03 13:01 ./usr/lib/arm-linux-gnueabihf/libbpp-seq.so.9.1.3
drwxr-xr-x root/root         0 2016-05-03 13:01 ./usr/share/
drwxr-xr-x root/root         0 2016-05-03 13:01 ./usr/share/doc/
drwxr-xr-x root/root         0 2016-05-03 13:01 ./usr/share/doc/libbpp-seq9v5/
-rw-r--r-- root/root       909 2016-04-21 05:36 ./usr/share/doc/libbpp-seq9v5/changelog.Debian.gz
-rw-r--r-- root/root      4892 2014-09-23 14:51 ./usr/share/doc/libbpp-seq9v5/changelog.gz
-rw-r--r-- root/root      3115 2016-04-21 05:36 ./usr/share/doc/libbpp-seq9v5/copyright


+------------------------------------------------------------------------------+
| Post Build                                                                   |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: armhf
Build-Space: 101364
Build-Time: 1873
Distribution: stretch-staging
Host Architecture: armhf
Install-Time: 333
Job: libbpp-seq_2.2.0-1
Machine Architecture: armhf
Package: libbpp-seq
Package-Time: 2251
Source-Version: 2.2.0-1
Space: 101364
Status: successful
Version: 2.2.0-1
--------------------------------------------------------------------------------
Finished at 20160503-1303
Build needed 00:37:31, 101364k disc space
Raspbian Package Auto-Building

Build log for libbpp-seq (2.2.0-1) on armhf
