libbpp-phyl →
2.1.0-1+b1 →
armhf → 2016-04-21 06:01:36
sbuild (Debian sbuild) 0.66.0 (04 Oct 2015) on testwandboard
+==============================================================================+
| libbpp-phyl 2.1.0-1+b1 (armhf) 21 Apr 2016 03:17 |
+==============================================================================+
Package: libbpp-phyl
Version: 2.1.0-1+b1
Source Version: 2.1.0-1
Distribution: stretch-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'build/libbpp-phyl-emD6xY/libbpp-phyl-2.1.0' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/libbpp-phyl-emD6xY' with '<<BUILDDIR>>'
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/stretch-staging-armhf-sbuild-691e5345-cf1f-4ef1-b47c-70e57b3bbd45' with '<<CHROOT>>'
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| Update chroot |
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Get:1 http://172.17.0.1/private stretch-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private stretch-staging/main Sources [8916 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf Packages [11.0 MB]
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| Fetch source files |
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Get:1 http://172.17.0.1/private stretch-staging/main libbpp-phyl 2.1.0-1 (dsc) [1117 B]
Get:2 http://172.17.0.1/private stretch-staging/main libbpp-phyl 2.1.0-1 (tar) [568 kB]
Get:3 http://172.17.0.1/private stretch-staging/main libbpp-phyl 2.1.0-1 (diff) [4697 B]
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Merged Build-Depends: build-essential, fakeroot
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dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-IkJw5V/apt_archive/sbuild-build-depends-core-dummy.deb'.
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| Install core build dependencies (apt-based resolver) |
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The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 15 not upgraded.
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Filtered Build-Depends: debhelper (>= 5), cmake (>= 2.6), libbpp-seq-dev (>= 2.1.0)
dpkg-deb: building package 'sbuild-build-depends-libbpp-phyl-dummy' in '/<<BUILDDIR>>/resolver-Vc5AlR/apt_archive/sbuild-build-depends-libbpp-phyl-dummy.deb'.
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+------------------------------------------------------------------------------+
| Install libbpp-phyl build dependencies (apt-based resolver) |
+------------------------------------------------------------------------------+
Installing build dependencies
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Building dependency tree...
Reading state information...
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data
debhelper dh-autoreconf dh-strip-nondeterminism file gettext gettext-base
groff-base intltool-debian libarchive-zip-perl libarchive13 libbpp-core-dev
libbpp-core2v5 libbpp-seq-dev libbpp-seq9v5 libbsd0 libcroco3 libcurl3
libexpat1 libffi6 libfile-stripnondeterminism-perl libglib2.0-0 libgnutls30
libgssapi-krb5-2 libhogweed4 libicu55 libidn11 libjsoncpp1 libk5crypto3
libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 liblzo2-2 libmagic1
libnettle6 libnghttp2-14 libp11-kit0 libpipeline1 librtmp1 libsasl2-2
libsasl2-modules-db libsigsegv2 libssh2-1 libssl1.0.2 libtasn1-6
libtimedate-perl libtool libunistring0 libxml2 m4 man-db po-debconf
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation codeblocks eclipse ninja-build dh-make gettext-doc libasprintf-dev
libgettextpo-dev groff lrzip gnutls-bin krb5-doc krb5-user libtool-doc
gfortran | fortran95-compiler gcj-jdk less www-browser libmail-box-perl
Recommended packages:
curl | wget | lynx-cur ca-certificates libglib2.0-data shared-mime-info
xdg-user-dirs krb5-locales libsasl2-modules libltdl-dev xml-core
libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data
debhelper dh-autoreconf dh-strip-nondeterminism file gettext gettext-base
groff-base intltool-debian libarchive-zip-perl libarchive13 libbpp-core-dev
libbpp-core2v5 libbpp-seq-dev libbpp-seq9v5 libbsd0 libcroco3 libcurl3
libexpat1 libffi6 libfile-stripnondeterminism-perl libglib2.0-0 libgnutls30
libgssapi-krb5-2 libhogweed4 libicu55 libidn11 libjsoncpp1 libk5crypto3
libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 liblzo2-2 libmagic1
libnettle6 libnghttp2-14 libp11-kit0 libpipeline1 librtmp1 libsasl2-2
libsasl2-modules-db libsigsegv2 libssh2-1 libssl1.0.2 libtasn1-6
libtimedate-perl libtool libunistring0 libxml2 m4 man-db po-debconf
sbuild-build-depends-libbpp-phyl-dummy
0 upgraded, 60 newly installed, 0 to remove and 15 not upgraded.
Need to get 18.7 MB/28.9 MB of archives.
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Get:1 file:/<<BUILDDIR>>/resolver-Vc5AlR/apt_archive ./ sbuild-build-depends-libbpp-phyl-dummy 0.invalid.0 [790 B]
Get:2 http://172.17.0.1/private stretch-staging/main armhf groff-base armhf 1.22.3-7 [1083 kB]
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Get:5 http://172.17.0.1/private stretch-staging/main armhf libpipeline1 armhf 1.4.1-2 [23.7 kB]
Get:6 http://172.17.0.1/private stretch-staging/main armhf man-db armhf 2.7.5-1 [975 kB]
Get:7 http://172.17.0.1/private stretch-staging/main armhf cmake-data all 3.5.1-1 [1131 kB]
Get:8 http://172.17.0.1/private stretch-staging/main armhf liblzo2-2 armhf 2.08-1.2 [47.6 kB]
Get:9 http://172.17.0.1/private stretch-staging/main armhf libarchive13 armhf 3.1.2-11+b1 [230 kB]
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Get:13 http://172.17.0.1/private stretch-staging/main armhf libldap-2.4-2 armhf 2.4.42+dfsg-2+rpi1+b2 [198 kB]
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Get:15 http://172.17.0.1/private stretch-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d-1+b1 [54.4 kB]
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Get:20 http://172.17.0.1/private stretch-staging/main armhf cmake armhf 3.5.1-1 [2192 kB]
Get:21 http://172.17.0.1/private stretch-staging/main armhf libunistring0 armhf 0.9.3-5.2 [253 kB]
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Get:23 http://172.17.0.1/private stretch-staging/main armhf file armhf 1:5.25-2 [61.2 kB]
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Get:31 http://172.17.0.1/private stretch-staging/main armhf libglib2.0-0 armhf 2.48.0-1 [2540 kB]
Get:32 http://172.17.0.1/private stretch-staging/main armhf libcroco3 armhf 0.6.11-1 [131 kB]
Get:33 http://172.17.0.1/private stretch-staging/main armhf gettext armhf 0.19.7-2 [1400 kB]
Get:34 http://172.17.0.1/private stretch-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:35 http://172.17.0.1/private stretch-staging/main armhf po-debconf all 1.0.19 [249 kB]
Get:36 http://172.17.0.1/private stretch-staging/main armhf libarchive-zip-perl all 1.57-1 [95.1 kB]
Get:37 http://172.17.0.1/private stretch-staging/main armhf libfile-stripnondeterminism-perl all 0.016-1 [11.9 kB]
Get:38 http://172.17.0.1/private stretch-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:39 http://172.17.0.1/private stretch-staging/main armhf dh-strip-nondeterminism all 0.016-1 [6998 B]
Get:40 http://172.17.0.1/private stretch-staging/main armhf libtool all 2.4.6-0.1 [200 kB]
Get:41 http://172.17.0.1/private stretch-staging/main armhf dh-autoreconf all 12 [15.8 kB]
Get:42 http://172.17.0.1/private stretch-staging/main armhf debhelper all 9.20160403 [800 kB]
Get:43 http://172.17.0.1/private stretch-staging/main armhf libbpp-core2v5 armhf 2.2.0-1 [439 kB]
Get:44 http://172.17.0.1/private stretch-staging/main armhf libbpp-core-dev armhf 2.2.0-1 [1524 kB]
Get:45 http://172.17.0.1/private stretch-staging/main armhf libbpp-seq9v5 armhf 2.1.0-1+rpi1 [375 kB]
Get:46 http://172.17.0.1/private stretch-staging/main armhf libbpp-seq-dev armhf 2.1.0-1+rpi1 [660 kB]
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-- Creating generic include file: /usr/include/Bpp.all
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-- Creating generic include file: /usr/include/Bpp/Numeric/Stat/Mva.all
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-- Creating generic include file: /usr/include/Bpp/Seq/AlphabetIndex.all
-- Creating generic include file: /usr/include/Bpp/Seq/App.all
-- Creating generic include file: /usr/include/Bpp/Seq/Container.all
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-- Creating generic include file: /usr/include/Bpp/Text.all
-- Creating generic include file: /usr/include/Bpp/Utils.all
Setting up dh-autoreconf (12) ...
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Setting up dh-strip-nondeterminism (0.016-1) ...
Processing triggers for libc-bin (2.22-5) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.5.0-1-armmp armhf (armv7l)
Toolchain package versions: binutils_2.26-8 dpkg-dev_1.18.4 g++-5_5.3.1-14 gcc-5_5.3.1-14 libc6-dev_2.22-5 libstdc++-5-dev_5.3.1-14 libstdc++6_5.3.1-14 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch
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+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
gpgv: Signature made Sun May 26 15:22:05 2013 UTC using DSA key ID 497A176D
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./libbpp-phyl_2.1.0-1.dsc
dpkg-source: info: extracting libbpp-phyl in libbpp-phyl-2.1.0
dpkg-source: info: unpacking libbpp-phyl_2.1.0.orig.tar.gz
dpkg-source: info: unpacking libbpp-phyl_2.1.0-1.debian.tar.gz
Check disc space
----------------
Sufficient free space for build
Hack binNMU version
-------------------
Created changelog entry for binNMU version 2.1.0-1+b1
User Environment
----------------
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=stretch-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=stretch-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=stretch-staging-armhf-sbuild-691e5345-cf1f-4ef1-b47c-70e57b3bbd45
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: source package libbpp-phyl
dpkg-buildpackage: source version 2.1.0-1+b1
dpkg-buildpackage: source distribution stretch-staging
dpkg-source --before-build libbpp-phyl-2.1.0
dpkg-buildpackage: host architecture armhf
fakeroot debian/rules clean
dh_testdir
dh_testroot
# Add here commands to clean up after the build process.
[ ! -f Makefile ] || /usr/bin/make clean;
[ ! -f Makefile ] || rm Makefile;
[ ! -f src/Makefile ] || rm src/Makefile;
[ ! -f test/Makefile ] || rm test/Makefile;
rm -f config.sub config.guess
rm -f build-stamp
rm -f CMakeCache.txt
rm -f *.cmake
rm -f src/*.cmake
rm -f test/*.cmake
rm -rf CMakeFiles
rm -rf src/CMakeFiles
rm -rf test/CMakeFiles
rm -rf _CPack_Packages
rm -rf Testing
rm -f DartConfiguration.tcl
dh_clean
dpkg-buildpackage: warning: debian/rules must be updated to support the 'build-arch' and 'build-indep' targets (at least 'build-arch' seems to be missing)
debian/rules build
cmake -DCMAKE_INSTALL_PREFIX=/usr -DBUILD_TESTING=OFF .
-- The CXX compiler identification is GNU 5.3.1
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Library bpp-seq found here:
includes : /usr/include
libraries: /usr/lib/libbpp-seq.so
-- Library bpp-core found here:
includes : /usr/include
libraries: /usr/lib/arm-linux-gnueabihf/libbpp-core.so
-- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE)
-- Configuring done
-- Generating done
-- Build files have been written to: /<<PKGBUILDDIR>>
dh_testdir
dh_testdir
# Add here commands to compile the package.
/usr/bin/make
make[1]: Entering directory '/<<PKGBUILDDIR>>'
make[2]: Entering directory '/<<PKGBUILDDIR>>'
make[3]: Entering directory '/<<PKGBUILDDIR>>'
Scanning dependencies of target bppphyl-shared
make[3]: Leaving directory '/<<PKGBUILDDIR>>'
make[3]: Entering directory '/<<PKGBUILDDIR>>'
[ 0%] Building CXX object src/CMakeFiles/bppphyl-shared.dir/Bpp/Phyl/App/PhylogeneticsApplicationTools.cpp.o
[ 0%] Building CXX object src/CMakeFiles/bppphyl-shared.dir/Bpp/Phyl/BipartitionList.cpp.o
[ 1%] Building CXX object src/CMakeFiles/bppphyl-shared.dir/Bpp/Phyl/BipartitionTools.cpp.o
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[ 67%] Building CXX object src/CMakeFiles/bppphyl-static.dir/Bpp/Phyl/Mapping/LaplaceSubstitutionCount.cpp.o
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[ 70%] Building CXX object src/CMakeFiles/bppphyl-static.dir/Bpp/Phyl/Mapping/SubstitutionMappingTools.cpp.o
[ 70%] Building CXX object src/CMakeFiles/bppphyl-static.dir/Bpp/Phyl/Model/StateMap.cpp.o
[ 70%] Building CXX object src/CMakeFiles/bppphyl-static.dir/Bpp/Phyl/Model/BinarySubstitutionModel.cpp.o
[ 71%] Building CXX object src/CMakeFiles/bppphyl-static.dir/Bpp/Phyl/Model/AbstractSubstitutionModel.cpp.o
[ 71%] Building CXX object src/CMakeFiles/bppphyl-static.dir/Bpp/Phyl/Model/AbstractBiblioSubstitutionModel.cpp.o
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[ 72%] Building CXX object src/CMakeFiles/bppphyl-static.dir/Bpp/Phyl/Model/AbstractMixedSubstitutionModel.cpp.o
[ 72%] Building CXX object src/CMakeFiles/bppphyl-static.dir/Bpp/Phyl/Model/MixtureOfASubstitutionModel.cpp.o
[ 73%] Building CXX object src/CMakeFiles/bppphyl-static.dir/Bpp/Phyl/Model/MixtureOfSubstitutionModels.cpp.o
[ 73%] Building CXX object src/CMakeFiles/bppphyl-static.dir/Bpp/Phyl/Model/RateDistributionFactory.cpp.o
[ 73%] Building CXX object src/CMakeFiles/bppphyl-static.dir/Bpp/Phyl/Model/RE08.cpp.o
[ 74%] Building CXX object src/CMakeFiles/bppphyl-static.dir/Bpp/Phyl/Model/SubstitutionModelFactory.cpp.o
[ 74%] Building CXX object src/CMakeFiles/bppphyl-static.dir/Bpp/Phyl/Model/SubstitutionModelSet.cpp.o
[ 75%] Building CXX object src/CMakeFiles/bppphyl-static.dir/Bpp/Phyl/Model/MixedSubstitutionModelSet.cpp.o
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[ 75%] Building CXX object src/CMakeFiles/bppphyl-static.dir/Bpp/Phyl/Model/AbstractWordSubstitutionModel.cpp.o
[ 76%] Building CXX object src/CMakeFiles/bppphyl-static.dir/Bpp/Phyl/Model/WordSubstitutionModel.cpp.o
[ 76%] Building CXX object src/CMakeFiles/bppphyl-static.dir/Bpp/Phyl/Model/Nucleotide/F84.cpp.o
[ 76%] Building CXX object src/CMakeFiles/bppphyl-static.dir/Bpp/Phyl/Model/Nucleotide/HKY85.cpp.o
[ 77%] Building CXX object src/CMakeFiles/bppphyl-static.dir/Bpp/Phyl/Model/Nucleotide/JCnuc.cpp.o
[ 77%] Building CXX object src/CMakeFiles/bppphyl-static.dir/Bpp/Phyl/Model/Nucleotide/GTR.cpp.o
[ 77%] Building CXX object src/CMakeFiles/bppphyl-static.dir/Bpp/Phyl/Model/Nucleotide/K80.cpp.o
[ 78%] Building CXX object src/CMakeFiles/bppphyl-static.dir/Bpp/Phyl/Model/Nucleotide/L95.cpp.o
[ 78%] Building CXX object src/CMakeFiles/bppphyl-static.dir/Bpp/Phyl/Model/Nucleotide/RN95.cpp.o
[ 78%] Building CXX object src/CMakeFiles/bppphyl-static.dir/Bpp/Phyl/Model/Nucleotide/RN95s.cpp.o
[ 79%] Building CXX object src/CMakeFiles/bppphyl-static.dir/Bpp/Phyl/Model/Nucleotide/SSR.cpp.o
/<<PKGBUILDDIR>>/src/Bpp/Phyl/Model/Nucleotide/SSR.cpp: In constructor 'bpp::SSR::SSR(const bpp::NucleicAlphabet*, double, double, double, double)':
/<<PKGBUILDDIR>>/src/Bpp/Phyl/Model/Nucleotide/SSR.cpp:55:1: warning: 'bpp::SSR::delta_' is initialized with itself [-Winit-self]
SSR::SSR(
^
[ 79%] Building CXX object src/CMakeFiles/bppphyl-static.dir/Bpp/Phyl/Model/Nucleotide/T92.cpp.o
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[ 82%] Building CXX object src/CMakeFiles/bppphyl-static.dir/Bpp/Phyl/Model/Protein/JTT92.cpp.o
[ 82%] Building CXX object src/CMakeFiles/bppphyl-static.dir/Bpp/Phyl/Model/Protein/LG08.cpp.o
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make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
touch build-stamp
fakeroot debian/rules binary-arch
cmake -DCMAKE_INSTALL_PREFIX=/usr -DBUILD_TESTING=OFF .
-- Library bpp-seq found here:
includes : /usr/include
libraries: /usr/lib/libbpp-seq.so
-- Library bpp-core found here:
includes : /usr/include
libraries: /usr/lib/arm-linux-gnueabihf/libbpp-core.so
-- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE)
-- Configuring done
-- Generating done
-- Build files have been written to: /<<PKGBUILDDIR>>
dh_testdir
dh_testdir
# Add here commands to compile the package.
/usr/bin/make
make[1]: Entering directory '/<<PKGBUILDDIR>>'
make[2]: Entering directory '/<<PKGBUILDDIR>>'
make[3]: Entering directory '/<<PKGBUILDDIR>>'
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[ 50%] Built target bppphyl-shared
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[100%] Built target bppphyl-static
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
touch build-stamp
dh_testdir
dh_testroot
dh_prep
dh_installdirs
# Add here commands to install the package into debian/tmp
/usr/bin/make DESTDIR=/<<PKGBUILDDIR>>/debian/tmp install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
make[2]: Entering directory '/<<PKGBUILDDIR>>'
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make[2]: Leaving directory '/<<PKGBUILDDIR>>'
Install the project...
-- Install configuration: "RelWithDebInfo"
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libbpp-phyl.a
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libbpp-phyl.so.9.1.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libbpp-phyl.so.9
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libbpp-phyl.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/TreeTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Tree.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/PatternTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/OptimizationTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/TreeExceptions.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/MixtureOfSubstitutionModels.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/AbstractWordSubstitutionModel.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/RE08.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/BinarySubstitutionModel.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Nucleotide
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Nucleotide/RN95.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Nucleotide/NucleotideSubstitutionModel.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Nucleotide/T92.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Nucleotide/K80.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Nucleotide/RN95s.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Nucleotide/JCnuc.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Nucleotide/TN93.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Nucleotide/gBGC.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Nucleotide/GTR.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Nucleotide/F84.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Nucleotide/SSR.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Nucleotide/HKY85.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Nucleotide/YpR.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Nucleotide/L95.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/RateDistributionFactory.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Protein
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Protein/LG08.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Protein/LLG08_EHO.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Protein/LLG08_UL2.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Protein/WAG01.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Protein/LGL08_CAT.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Protein/CoalaCore.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Protein/DSO78.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Protein/ProteinSubstitutionModel.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Protein/UserProteinSubstitutionModel.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Protein/LLG08_EX2.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Protein/Coala.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Protein/JCprot.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Protein/LLG08_UL3.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Protein/JTT92.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Protein/LLG08_EX3.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/RateDistribution
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/RateDistribution/ConstantRateDistribution.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/RateDistribution/GammaDiscreteRateDistribution.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/RateDistribution/GaussianDiscreteRateDistribution.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/RateDistribution/ExponentialDiscreteRateDistribution.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/MixedSubstitutionModel.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/SubstitutionModelFactory.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/StateMap.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/MixedSubstitutionModelSet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/AbstractBiblioMixedSubstitutionModel.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/WordSubstitutionModel.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/G2001.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/SubstitutionModel.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/SubstitutionModelSetTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/MarkovModulatedSubstitutionModel.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/SubstitutionModelSet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/AbstractMixedSubstitutionModel.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Codon
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Codon/CodonDistanceFitnessPhaseFrequenciesSubstitutionModel.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Codon/AbstractCodonPhaseFrequenciesSubstitutionModel.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Codon/AbstractCodonDistanceSubstitutionModel.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Codon/YNGKP_M2.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Codon/CodonRateSubstitutionModel.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Codon/CodonSubstitutionModel.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Codon/GY94.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Codon/YNGKP_M3.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Codon/YN98.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Codon/CodonDistancePhaseFrequenciesSubstitutionModel.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Codon/YNGKP_M7.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Codon/YNGKP_M8.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Codon/AbstractCodonFrequenciesSubstitutionModel.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Codon/CodonDistanceSubstitutionModel.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Codon/CodonRateFrequenciesSubstitutionModel.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Codon/TripletSubstitutionModel.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Codon/CodonDistanceFrequenciesSubstitutionModel.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Codon/AbstractCodonFitnessSubstitutionModel.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Codon/MG94.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Codon/YNGKP_M1.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/Codon/AbstractCodonSubstitutionModel.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/TS98.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/AbstractBiblioSubstitutionModel.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/MixtureOfASubstitutionModel.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/FrequenciesSet
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/FrequenciesSet/WordFrequenciesSet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/FrequenciesSet/MvaFrequenciesSet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/FrequenciesSet/CodonFrequenciesSet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/FrequenciesSet/FrequenciesSet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/FrequenciesSet/ProteinFrequenciesSet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/FrequenciesSet/NucleotideFrequenciesSet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Model/AbstractSubstitutionModel.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/BipartitionList.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/TopologySearch.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/DRHomogeneousTreeLikelihood.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/RHomogeneousClockTreeLikelihood.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/RNonHomogeneousMixedTreeLikelihood.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/AbstractNonHomogeneousTreeLikelihood.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/DRHomogeneousMixedTreeLikelihood.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/NonHomogeneousTreeLikelihood.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/TreeLikelihoodData.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/HomogeneousTreeLikelihood.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/DRASRTreeLikelihoodData.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/AbstractTreeLikelihoodData.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/GlobalClockTreeLikelihoodFunctionWrapper.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/PairedSiteLikelihoods.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/PseudoNewtonOptimizer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/RHomogeneousTreeLikelihood.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/AbstractTreeLikelihood.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/SitePartitionTreeLikelihood.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/AbstractHomogeneousTreeLikelihood.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/DRTreeLikelihood.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/DiscreteRatesAcrossSitesTreeLikelihood.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/DRASDRTreeLikelihoodData.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/RASTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/MarginalAncestralStateReconstruction.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/DRNonHomogeneousTreeLikelihood.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/NNIHomogeneousTreeLikelihood.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/AbstractDiscreteRatesAcrossSitesTreeLikelihood.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/DRTreeLikelihoodTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/TreeLikelihoodTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/RHomogeneousMixedTreeLikelihood.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/RNonHomogeneousTreeLikelihood.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/TreeLikelihood.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Likelihood/ClockTreeLikelihood.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/App
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/App/PhylogeneticsApplicationTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Mapping
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Mapping/SubstitutionMappingTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Mapping/SubstitutionCount.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Mapping/LaplaceSubstitutionCount.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Mapping/SubstitutionRegister.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Mapping/OneJumpSubstitutionCount.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Mapping/SubstitutionMapping.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Mapping/DecompositionSubstitutionCount.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Mapping/UniformizationSubstitutionCount.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Mapping/WeightedSubstitutionCount.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Mapping/ProbabilisticSubstitutionMapping.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Mapping/NaiveSubstitutionCount.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Parsimony
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Parsimony/TreeParsimonyScore.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Parsimony/AbstractTreeParsimonyData.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Parsimony/DRTreeParsimonyData.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Parsimony/TreeParsimonyData.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Parsimony/DRTreeParsimonyScore.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Parsimony/AbstractTreeParsimonyScore.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Simulation
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Simulation/SequenceSimulationTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Simulation/SiteSimulator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Simulation/NonHomogeneousSequenceSimulator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Simulation/SequenceSimulator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Simulation/DetailedSiteSimulator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Simulation/HomogeneousSequenceSimulator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Simulation/MutationProcess.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/TreeTemplate.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/AncestralStateReconstruction.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Distance
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Distance/DistanceMethod.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Distance/PGMA.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Distance/HierarchicalClustering.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Distance/AbstractAgglomerativeDistanceMethod.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Distance/BioNJ.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Distance/NeighborJoining.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Distance/DistanceEstimation.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/NodeTemplate.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Graphics
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Graphics/AbstractTreeDrawing.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Graphics/TreeDrawingDisplayControler.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Graphics/TreeDrawing.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Graphics/CladogramPlot.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Graphics/PhylogramPlot.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Graphics/AbstractDendrogramPlot.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Graphics/TreeDrawingListener.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/PhyloStatistics.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/BipartitionTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/TreeTemplateTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/SitePatterns.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/NNITopologySearch.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Io
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Io/IoFrequenciesSetFactory.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Io/BppOSubstitutionModelFormat.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Io/IoDistanceMatrixFactory.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Io/IoSubstitutionModel.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Io/IoDistanceMatrix.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Io/IoPairedSiteLikelihoods.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Io/BppOFrequenciesSetFormat.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Io/IoTree.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Io/PhylipDistanceMatrixFormat.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Io/Newick.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Io/Nhx.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Io/NexusIoTree.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Io/IoTreeFactory.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Io/BppORateDistributionFormat.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Io/IoFrequenciesSet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Io/IoSubstitutionModelFactory.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/Node.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/Phyl/NNISearchable.h
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_testdir
dh_testroot
dh_installchangelogs ChangeLog
dh_installdocs
dh_installexamples
dh_install
dh_installman
dh_link
dh_strip
dh_compress
dh_fixperms
dh_makeshlibs
dh_installdeb
dh_shlibdeps
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libbpp-phyl9/usr/lib/libbpp-phyl.so.9.1.3 found in none of the libraries
dh_gencontrol
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dh_md5sums
dh_builddeb
dpkg-deb: building package 'libbpp-phyl-dev' in '../libbpp-phyl-dev_2.1.0-1+b1_armhf.deb'.
dpkg-deb: building package 'libbpp-phyl9-dbgsym' in '../libbpp-phyl9-dbgsym_2.1.0-1+b1_armhf.deb'.
dpkg-deb: building package 'libbpp-phyl9' in '../libbpp-phyl9_2.1.0-1+b1_armhf.deb'.
dpkg-genchanges -B -mRaspbian wandboard test autobuilder <root@raspbian.org> >../libbpp-phyl_2.1.0-1+b1_armhf.changes
dpkg-genchanges: warning: package libbpp-phyl9-dbgsym listed in files list but not in control info
dpkg-genchanges: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build libbpp-phyl-2.1.0
dpkg-buildpackage: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 20160421-0601
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
libbpp-phyl_2.1.0-1+b1_armhf.changes:
-------------------------------------
Format: 1.8
Date: Thu, 07 Mar 2013 15:58:00 +0100
Source: libbpp-phyl (2.1.0-1)
Binary: libbpp-phyl-dev libbpp-phyl9
Binary-Only: yes
Architecture: armhf
Version: 2.1.0-1+b1
Distribution: stretch-staging
Urgency: low
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Raspbian wandboard test autobuilder <root@raspbian.org>
Description:
libbpp-phyl-dev - Bio++ Phylogenetic library development files.
libbpp-phyl9 - Bio++ Phylogenetic library.
Changes:
libbpp-phyl (2.1.0-1+b1) stretch-staging; urgency=low, binary-only=yes
.
* Binary-only non-maintainer upload for armhf; no source changes.
* rebuild due to debcheck failure
Checksums-Sha1:
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c20666fc49c0b7664ee92b691c6d8eff4aef12d2 22271984 libbpp-phyl9-dbgsym_2.1.0-1+b1_armhf.deb
11e52364491ed18e74913ecf648ffe97d756c925 1179514 libbpp-phyl9_2.1.0-1+b1_armhf.deb
Checksums-Sha256:
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9cca14dbdac78834c14c88bcf4d4de3a7446aa4c646cb23d95b3e4445796b0bb 22271984 libbpp-phyl9-dbgsym_2.1.0-1+b1_armhf.deb
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Files:
62996ea176579d5dcd9f8eb82a55d640 2443336 libdevel optional libbpp-phyl-dev_2.1.0-1+b1_armhf.deb
61799e554515e8aa9477fb07c7ded6bc 22271984 debug extra libbpp-phyl9-dbgsym_2.1.0-1+b1_armhf.deb
d45848bc4e157aa0a8bdfa777b0b9b99 1179514 libs optional libbpp-phyl9_2.1.0-1+b1_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
libbpp-phyl-dev_2.1.0-1+b1_armhf.deb
------------------------------------
new debian package, version 2.0.
size 2443336 bytes: control archive=6583 bytes.
368 bytes, 11 lines control
16430 bytes, 189 lines md5sums
803 bytes, 43 lines * postinst #!/bin/bash
852 bytes, 45 lines * postrm #!/bin/bash
398 bytes, 27 lines * prerm #!/bin/bash
Package: libbpp-phyl-dev
Source: libbpp-phyl (2.1.0-1)
Version: 2.1.0-1+b1
Architecture: armhf
Maintainer: Loic Dachary <loic@dachary.org>
Installed-Size: 25148
Depends: libbpp-phyl9 (= 2.1.0-1+b1), libbpp-seq-dev (>= 2.1.0)
Section: libdevel
Priority: optional
Description: Bio++ Phylogenetic library development files.
Contains the Bio++ classes for phylogenetics.
drwxr-xr-x root/root 0 2016-04-21 05:59 ./
drwxr-xr-x root/root 0 2016-04-21 05:58 ./usr/
drwxr-xr-x root/root 0 2016-04-21 05:58 ./usr/include/
drwxr-xr-x root/root 0 2016-04-21 05:58 ./usr/include/Bpp/
drwxr-xr-x root/root 0 2016-04-21 05:58 ./usr/include/Bpp/Phyl/
-rw-r--r-- root/root 3681 2013-05-24 12:31 ./usr/include/Bpp/Phyl/AncestralStateReconstruction.h
drwxr-xr-x root/root 0 2016-04-21 05:58 ./usr/include/Bpp/Phyl/App/
-rw-r--r-- root/root 31182 2013-05-24 12:31 ./usr/include/Bpp/Phyl/App/PhylogeneticsApplicationTools.h
-rw-r--r-- root/root 8234 2013-05-24 12:31 ./usr/include/Bpp/Phyl/BipartitionList.h
-rw-r--r-- root/root 5897 2013-05-24 12:31 ./usr/include/Bpp/Phyl/BipartitionTools.h
drwxr-xr-x root/root 0 2016-04-21 05:58 ./usr/include/Bpp/Phyl/Distance/
-rw-r--r-- root/root 7687 2013-05-24 12:31 ./usr/include/Bpp/Phyl/Distance/AbstractAgglomerativeDistanceMethod.h
-rw-r--r-- root/root 3898 2013-05-24 12:31 ./usr/include/Bpp/Phyl/Distance/BioNJ.h
-rw-r--r-- root/root 19247 2013-05-24 12:31 ./usr/include/Bpp/Phyl/Distance/DistanceEstimation.h
-rw-r--r-- root/root 3240 2013-05-24 12:31 ./usr/include/Bpp/Phyl/Distance/DistanceMethod.h
-rw-r--r-- root/root 4014 2013-05-24 12:31 ./usr/include/Bpp/Phyl/Distance/HierarchicalClustering.h
-rw-r--r-- root/root 4199 2013-05-24 12:31 ./usr/include/Bpp/Phyl/Distance/NeighborJoining.h
-rw-r--r-- root/root 4096 2013-05-24 12:31 ./usr/include/Bpp/Phyl/Distance/PGMA.h
drwxr-xr-x root/root 0 2016-04-21 05:58 ./usr/include/Bpp/Phyl/Graphics/
-rw-r--r-- root/root 3320 2013-05-24 12:31 ./usr/include/Bpp/Phyl/Graphics/AbstractDendrogramPlot.h
-rw-r--r-- root/root 12655 2013-05-24 12:31 ./usr/include/Bpp/Phyl/Graphics/AbstractTreeDrawing.h
-rw-r--r-- root/root 3441 2013-05-24 12:31 ./usr/include/Bpp/Phyl/Graphics/CladogramPlot.h
-rw-r--r-- root/root 3369 2013-05-24 12:31 ./usr/include/Bpp/Phyl/Graphics/PhylogramPlot.h
-rw-r--r-- root/root 11871 2013-05-24 12:31 ./usr/include/Bpp/Phyl/Graphics/TreeDrawing.h
-rw-r--r-- root/root 6835 2013-05-24 12:31 ./usr/include/Bpp/Phyl/Graphics/TreeDrawingDisplayControler.h
-rw-r--r-- root/root 8939 2013-05-24 12:31 ./usr/include/Bpp/Phyl/Graphics/TreeDrawingListener.h
drwxr-xr-x root/root 0 2016-04-21 05:58 ./usr/include/Bpp/Phyl/Io/
-rw-r--r-- root/root 3532 2013-05-24 12:31 ./usr/include/Bpp/Phyl/Io/BppOFrequenciesSetFormat.h
-rw-r--r-- root/root 3192 2013-05-24 12:31 ./usr/include/Bpp/Phyl/Io/BppORateDistributionFormat.h
-rw-r--r-- root/root 5948 2013-05-24 12:31 ./usr/include/Bpp/Phyl/Io/BppOSubstitutionModelFormat.h
-rw-r--r-- root/root 5033 2013-05-24 12:31 ./usr/include/Bpp/Phyl/Io/IoDistanceMatrix.h
-rw-r--r-- root/root 3276 2013-05-24 12:31 ./usr/include/Bpp/Phyl/Io/IoDistanceMatrixFactory.h
-rw-r--r-- root/root 4252 2013-05-24 12:31 ./usr/include/Bpp/Phyl/Io/IoFrequenciesSet.h
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libbpp-phyl9-dbgsym_2.1.0-1+b1_armhf.deb
----------------------------------------
new debian package, version 2.0.
size 22271984 bytes: control archive=452 bytes.
363 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: libbpp-phyl9-dbgsym
Source: libbpp-phyl (2.1.0-1)
Version: 2.1.0-1+b1
Architecture: armhf
Maintainer: Loic Dachary <loic@dachary.org>
Installed-Size: 22756
Depends: libbpp-phyl9 (= 2.1.0-1+b1)
Section: debug
Priority: extra
Description: Debug symbols for libbpp-phyl9
Auto-Built-Package: debug-symbols
Build-Ids: 3e6e68dd76f16518f0bedc67ae409e2394835987
drwxr-xr-x root/root 0 2016-04-21 05:59 ./
drwxr-xr-x root/root 0 2016-04-21 05:59 ./usr/
drwxr-xr-x root/root 0 2016-04-21 05:58 ./usr/lib/
drwxr-xr-x root/root 0 2016-04-21 05:58 ./usr/lib/debug/
drwxr-xr-x root/root 0 2016-04-21 05:58 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2016-04-21 05:59 ./usr/lib/debug/.build-id/3e/
-rw-r--r-- root/root 23291788 2016-04-21 05:59 ./usr/lib/debug/.build-id/3e/6e68dd76f16518f0bedc67ae409e2394835987.debug
drwxr-xr-x root/root 0 2016-04-21 05:59 ./usr/share/
drwxr-xr-x root/root 0 2016-04-21 05:59 ./usr/share/doc/
lrwxrwxrwx root/root 0 2016-04-21 05:59 ./usr/share/doc/libbpp-phyl9-dbgsym -> libbpp-phyl9
libbpp-phyl9_2.1.0-1+b1_armhf.deb
---------------------------------
new debian package, version 2.0.
size 1179514 bytes: control archive=686 bytes.
398 bytes, 11 lines control
376 bytes, 5 lines md5sums
27 bytes, 1 lines shlibs
60 bytes, 2 lines triggers
Package: libbpp-phyl9
Source: libbpp-phyl (2.1.0-1)
Version: 2.1.0-1+b1
Architecture: armhf
Maintainer: Loic Dachary <loic@dachary.org>
Installed-Size: 5222
Depends: libbpp-core2v5, libbpp-seq9v5, libc6 (>= 2.4), libgcc1 (>= 1:4.0), libstdc++6 (>= 5.2), libbpp-seq9 (>= 2.1.0)
Section: libs
Priority: optional
Description: Bio++ Phylogenetic library.
Contains the Bio++ classes for phylogenetics.
drwxr-xr-x root/root 0 2016-04-21 05:59 ./
drwxr-xr-x root/root 0 2016-04-21 05:58 ./usr/
drwxr-xr-x root/root 0 2016-04-21 05:59 ./usr/lib/
lrwxrwxrwx root/root 0 2016-04-21 05:58 ./usr/lib/libbpp-phyl.so.9 -> libbpp-phyl.so.9.1.3
-rw-r--r-- root/root 5324004 2016-04-21 05:59 ./usr/lib/libbpp-phyl.so.9.1.3
drwxr-xr-x root/root 0 2016-04-21 05:58 ./usr/share/
drwxr-xr-x root/root 0 2016-04-21 05:58 ./usr/share/doc/
drwxr-xr-x root/root 0 2016-04-21 05:59 ./usr/share/doc/libbpp-phyl9/
-rw-r--r-- root/root 224 2016-04-21 03:22 ./usr/share/doc/libbpp-phyl9/changelog.Debian.armhf.gz
-rw-r--r-- root/root 835 2016-04-21 03:22 ./usr/share/doc/libbpp-phyl9/changelog.Debian.gz
-rw-r--r-- root/root 7118 2013-05-24 12:31 ./usr/share/doc/libbpp-phyl9/changelog.gz
-rw-r--r-- root/root 2976 2013-05-24 12:31 ./usr/share/doc/libbpp-phyl9/copyright
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| Summary |
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Build Architecture: armhf
Build-Space: 858836
Build-Time: 9520
Distribution: stretch-staging
Host Architecture: armhf
Install-Time: 250
Job: libbpp-phyl_2.1.0-1
Machine Architecture: armhf
Package: libbpp-phyl
Package-Time: 9813
Source-Version: 2.1.0-1
Space: 858836
Status: successful
Version: 2.1.0-1+b1
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Finished at 20160421-0601
Build needed 02:43:33, 858836k disc space