lammps →
20191120+dfsg1-2+b1 →
armhf → 2020-02-03 04:47:31
sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on test2019
+==============================================================================+
| lammps 20191120+dfsg1-2+b1 (armhf) Mon, 03 Feb 2020 02:23:30 +0000 |
+==============================================================================+
Package: lammps
Version: 20191120+dfsg1-2+b1
Source Version: 20191120+dfsg1-2
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
Build Type: any
I: NOTICE: Log filtering will replace 'var/run/schroot/mount/bullseye-staging-armhf-sbuild-220fd8ed-0e5d-41a5-bb22-a40bf8ac365d' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.5 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.7 MB]
Fetched 24.2 MB in 25s (984 kB/s)
Reading package lists...
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'lammps' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/science-team/lammps.git
Please use:
git clone https://salsa.debian.org/science-team/lammps.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 78.0 MB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main lammps 20191120+dfsg1-2 (dsc) [2820 B]
Get:2 http://172.17.0.1/private bullseye-staging/main lammps 20191120+dfsg1-2 (tar) [77.9 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main lammps 20191120+dfsg1-2 (diff) [14.1 kB]
Fetched 78.0 MB in 28s (2742 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/lammps-3Bh2QV/lammps-20191120+dfsg1' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/lammps-3Bh2QV' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-TZYsVk/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-TZYsVk/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-TZYsVk/gpg/trustdb.gpg: trustdb created
gpg: key E70254B6505CF8F7: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key E70254B6505CF8F7: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key E70254B6505CF8F7: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-TZYsVk/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-TZYsVk/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-TZYsVk/apt_archive ./ Release.gpg [370 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-TZYsVk/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-TZYsVk/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-TZYsVk/apt_archive ./ Packages [433 B]
Fetched 2109 B in 1s (3591 B/s)
Reading package lists...
W: copy:///<<BUILDDIR>>/resolver-TZYsVk/apt_archive/./Release.gpg: The key(s) in the keyring /etc/apt/trusted.gpg.d/sbuild-build-depends-archive.gpg are ignored as the file is not readable by user '_apt' executing apt-key.
W: GPG error: copy:/<<BUILDDIR>>/resolver-TZYsVk/apt_archive ./ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY E70254B6505CF8F7
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
libpam-cap
Use 'apt autoremove' to remove it.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-TZYsVk/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 14074 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any all)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: cmake, debhelper-compat (= 12), dh-python, gfortran | fortran-compiler, libavcodec-dev, libeigen3-dev, libfftw3-dev, libhdf5-mpi-dev, libjpeg-dev, libkim-api-dev, libnetcdf-dev, libsymspg-dev, libvtk7-dev, libvtk7-qt-dev, mpi-default-bin, mpi-default-dev, ocl-icd-opencl-dev | opencl-dev, python3-all-dev, python3-sphinx, voro++-dev
Filtered Build-Depends: cmake, debhelper-compat (= 12), dh-python, gfortran, libavcodec-dev, libeigen3-dev, libfftw3-dev, libhdf5-mpi-dev, libjpeg-dev, libkim-api-dev, libnetcdf-dev, libsymspg-dev, libvtk7-dev, libvtk7-qt-dev, mpi-default-bin, mpi-default-dev, ocl-icd-opencl-dev, python3-all-dev, python3-sphinx, voro++-dev
dpkg-deb: building package 'sbuild-build-depends-lammps-dummy' in '/<<BUILDDIR>>/resolver-TZYsVk/apt_archive/sbuild-build-depends-lammps-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-lammps-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-TZYsVk/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-TZYsVk/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-TZYsVk/apt_archive ./ Release.gpg [370 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-TZYsVk/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-TZYsVk/apt_archive ./ Sources [632 B]
Get:5 copy:/<<BUILDDIR>>/resolver-TZYsVk/apt_archive ./ Packages [698 B]
Fetched 2663 B in 1s (4456 B/s)
Reading package lists...
W: copy:///<<BUILDDIR>>/resolver-TZYsVk/apt_archive/./Release.gpg: The key(s) in the keyring /etc/apt/trusted.gpg.d/sbuild-build-depends-archive.gpg are ignored as the file is not readable by user '_apt' executing apt-key.
W: GPG error: copy:/<<BUILDDIR>>/resolver-TZYsVk/apt_archive ./ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY E70254B6505CF8F7
Reading package lists...
Install lammps build dependencies (apt-based resolver)
------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
libpam-cap
Use 'apt autoremove' to remove it.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils ca-certificates cmake
cmake-data cython3 debhelper default-libmysqlclient-dev dh-autoreconf
dh-python dh-strip-nondeterminism docutils-common dwz file fontconfig
fontconfig-config fonts-dejavu-core gdal-data gettext gettext-base gfortran
gfortran-9 groff-base hdf5-helpers ibverbs-providers icu-devtools
intltool-debian iso-codes libaec-dev libaec0 libaom0 libarchive-zip-perl
libarchive13 libarmadillo-dev libarmadillo9 libarpack2 libarpack2-dev
libavahi-client3 libavahi-common-data libavahi-common3 libavcodec-dev
libavcodec58 libavformat-dev libavformat58 libavutil-dev libavutil56
libblas-dev libblas3 libbluray2 libboost-dev libboost1.67-dev libbrotli1
libbsd0 libcairo2 libcfitsio-dev libcfitsio8 libcharls-dev libcharls2
libchromaprint1 libclang1-8 libcodec2-0.9 libcroco3 libcups2 libcurl3-gnutls
libcurl4-gnutls-dev libdap-dev libdap25 libdapclient6v5 libdapserver7v5
libdatrie1 libdbus-1-3 libdebhelper-perl libdouble-conversion3
libdrm-amdgpu1 libdrm-common libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2
libegl-dev libegl-mesa0 libegl1 libeigen3-dev libelf1 libepsilon-dev
libepsilon1 libevdev2 libevent-2.1-7 libevent-core-2.1-7 libevent-dev
libevent-extra-2.1-7 libevent-openssl-2.1-7 libevent-pthreads-2.1-7
libexpat1 libexpat1-dev libfftw3-bin libfftw3-dev libfftw3-double3
libfftw3-single3 libfile-stripnondeterminism-perl libfontconfig1
libfontconfig1-dev libfreetype-dev libfreetype6 libfreetype6-dev
libfreexl-dev libfreexl1 libfribidi0 libfyba-dev libfyba0 libgbm1
libgdal-dev libgdal26 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common
libgeos-3.8.0 libgeos-c1v5 libgeos-dev libgeotiff-dev libgeotiff5
libgfortran-9-dev libgfortran5 libgif-dev libgif7 libgl-dev libgl1
libgl1-mesa-dev libgl1-mesa-dri libgl2ps-dev libgl2ps1.4 libglapi-mesa
libgles-dev libgles1 libgles2 libglew-dev libglew2.1 libglib2.0-0
libglu1-mesa libglu1-mesa-dev libglvnd0 libglx-dev libglx-mesa0 libglx0
libgme0 libgmp-dev libgmpxx4ldbl libgnutls-dane0 libgnutls-openssl27
libgnutls28-dev libgnutlsxx28 libgraphite2-3 libgsm1 libgssapi-krb5-2
libgstreamer-plugins-base1.0-0 libgstreamer1.0-0 libgudev-1.0-0
libharfbuzz0b libhdf4-0-alt libhdf4-alt-dev libhdf5-103 libhdf5-cpp-103
libhdf5-dev libhdf5-mpi-dev libhdf5-openmpi-103 libhdf5-openmpi-dev
libhwloc-dev libhwloc-plugins libhwloc15 libhyphen0 libibverbs-dev
libibverbs1 libice-dev libice6 libicu-dev libicu63 libidn2-dev libinput-bin
libinput10 libjbig-dev libjbig0 libjpeg-dev libjpeg62-turbo
libjpeg62-turbo-dev libjs-jquery libjs-sphinxdoc libjs-underscore
libjson-c-dev libjson-c4 libjsoncpp-dev libjsoncpp1 libk5crypto3
libkeyutils1 libkim-api-dev libkim-api2 libkml-dev libkmlbase1
libkmlconvenience1 libkmldom1 libkmlengine1 libkmlregionator1 libkmlxsd1
libkrb5-3 libkrb5support0 liblapack-dev liblapack3 liblcms2-2 libllvm8
libllvm9 libltdl-dev libltdl7 liblzma-dev libmagic-mgc libmagic1
libmariadb-dev libmariadb-dev-compat libmariadb3 libminizip-dev libminizip1
libmp3lame0 libmpdec2 libmpg123-0 libmtdev1 libncurses6 libnetcdf-c++4
libnetcdf-cxx-legacy-dev libnetcdf-dev libnetcdf15 libnghttp2-14 libnl-3-200
libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnspr4 libnss3 libodbc1
libogdi-dev libogdi4.1 libogg-dev libogg0 libopenjp2-7 libopenjp2-7-dev
libopenmpi-dev libopenmpi3 libopenmpt0 libopus0 liborc-0.4-0 libp11-kit-dev
libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpciaccess0
libpcre16-3 libpcre2-16-0 libpcre3-dev libpcre32-3 libpcrecpp0v5
libpipeline1 libpixman-1-0 libpmix2 libpng-dev libpng16-16 libpoppler-dev
libpoppler-private-dev libpoppler82 libpopt0 libpq-dev libpq5 libprocps7
libproj-dev libproj15 libpsl5 libpthread-stubs0-dev libpython3-all-dev
libpython3-dev libpython3-stdlib libpython3.7 libpython3.7-dev
libpython3.7-minimal libpython3.7-stdlib libpython3.8 libpython3.8-dev
libpython3.8-minimal libpython3.8-stdlib libqhull-dev libqhull-r7 libqhull7
libqt5concurrent5 libqt5core5a libqt5dbus5 libqt5designer5
libqt5designercomponents5 libqt5gui5 libqt5help5 libqt5network5
libqt5opengl5 libqt5opengl5-dev libqt5positioning5 libqt5printsupport5
libqt5qml5 libqt5quick5 libqt5quickparticles5 libqt5quickshapes5
libqt5quicktest5 libqt5quickwidgets5 libqt5sensors5 libqt5sql5
libqt5sql5-sqlite libqt5test5 libqt5webchannel5 libqt5webkit5
libqt5webkit5-dev libqt5widgets5 libqt5x11extras5 libqt5xml5 librhash0
librsvg2-2 librtmp1 libsensors-config libsensors5 libshine3 libsigsegv2
libsm-dev libsm6 libsnappy1v5 libsodium23 libsoxr0 libspatialite-dev
libspatialite7 libspeex1 libsqlite3-dev libssh-gcrypt-4 libssh2-1 libssl1.1
libsub-override-perl libsuperlu-dev libsuperlu5 libswresample-dev
libswresample3 libswscale-dev libswscale5 libsymspg-dev libsymspg1 libsz2
libtasn1-6-dev libtcl8.6 libthai-data libthai0 libtheora-dev libtheora0
libtiff-dev libtiff5 libtiffxx5 libtinfo5 libtk8.6 libtool libtwolame0
libuchardet0 libunbound8 liburiparser-dev liburiparser1 libuv1 libva-drm2
libva-x11-2 libva2 libvdpau1 libvorbis0a libvorbisenc2 libvorbisfile3
libvoro++1 libvpx6 libvtk7-dev libvtk7-java libvtk7-jni libvtk7-qt-dev
libvtk7.1p libvtk7.1p-qt libvulkan-dev libvulkan1 libwacom-common libwacom2
libwavpack1 libwayland-client0 libwayland-server0 libwebp-dev libwebp6
libwebpdemux2 libwebpmux3 libwoff1 libx11-6 libx11-data libx11-dev
libx11-xcb1 libx264-155 libx265-179 libxau-dev libxau6 libxcb-dri2-0
libxcb-dri3-0 libxcb-glx0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1
libxcb-present0 libxcb-randr0 libxcb-render-util0 libxcb-render0
libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-util0 libxcb-xfixes0
libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxcb1 libxcb1-dev libxdamage1
libxdmcp-dev libxdmcp6 libxerces-c-dev libxerces-c3.2 libxext-dev libxext6
libxfixes3 libxft-dev libxft2 libxkbcommon-x11-0 libxkbcommon0 libxml2
libxml2-dev libxnvctrl0 libxrender-dev libxrender1 libxshmfence1 libxslt1.1
libxss-dev libxss1 libxt-dev libxt6 libxvidcore4 libxxf86vm1 libz3-4
libzstd-dev libzvbi-common libzvbi0 m4 man-db mariadb-common mime-support
mpi-default-bin mpi-default-dev mysql-common nettle-dev ocl-icd-libopencl1
ocl-icd-opencl-dev odbcinst odbcinst1debian2 opencl-c-headers openmpi-bin
openmpi-common openssh-client openssl pkg-config po-debconf procps proj-data
python-babel-localedata python3 python3-alabaster python3-all
python3-all-dev python3-asn1crypto python3-attr python3-autobahn
python3-automat python3-babel python3-cbor python3-certifi
python3-cffi-backend python3-chardet python3-constantly python3-cryptography
python3-dev python3-distutils python3-docutils python3-hyperlink
python3-idna python3-imagesize python3-incremental python3-jinja2
python3-lib2to3 python3-lz4 python3-markupsafe python3-minimal
python3-mpi4py python3-nacl python3-openssl python3-packaging
python3-pkg-resources python3-pyasn1 python3-pyasn1-modules python3-pygments
python3-pyparsing python3-pyqrcode python3-requests python3-roman
python3-service-identity python3-six python3-snappy python3-sphinx
python3-trie python3-twisted python3-twisted-bin python3-txaio python3-tz
python3-u-msgpack python3-ubjson python3-urllib3 python3-vtk7
python3-wsaccel python3-zope.interface python3.7 python3.7-dev
python3.7-minimal python3.8 python3.8-dev python3.8-minimal qdoc-qt5
qhelpgenerator-qt5 qt5-assistant qt5-qmake qt5-qmake-bin
qt5-qmltooling-plugins qtattributionsscanner-qt5 qtbase5-dev
qtbase5-dev-tools qtchooser qtdeclarative5-dev qtdeclarative5-dev-tools
qttools5-dev qttools5-dev-tools qttools5-private-dev sensible-utils
sgml-base shared-mime-info sphinx-common tcl tcl-dev tcl-vtk7 tcl8.6
tcl8.6-dev tk tk-dev tk8.6 tk8.6-dev ucf unixodbc-dev uuid-dev voro++-dev
vtk7 x11-common x11proto-core-dev x11proto-dev x11proto-scrnsaver-dev
x11proto-xext-dev xkb-data xml-core xorg-sgml-doctools xtrans-dev zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation cmake-doc ninja-build cython-doc dh-make gettext-doc
libasprintf-dev libgettextpo-dev gfortran-doc gfortran-9-doc libcoarrays-dev
groff isoquery lrzip libitpp-dev liblapack-doc libbluray-bdj libboost-doc
libboost1.67-doc libboost-atomic1.67-dev libboost-chrono1.67-dev
libboost-container1.67-dev libboost-context1.67-dev
libboost-contract1.67-dev libboost-coroutine1.67-dev
libboost-date-time1.67-dev libboost-exception1.67-dev libboost-fiber1.67-dev
libboost-filesystem1.67-dev libboost-graph1.67-dev
libboost-graph-parallel1.67-dev libboost-iostreams1.67-dev
libboost-locale1.67-dev libboost-log1.67-dev libboost-math1.67-dev
libboost-mpi1.67-dev libboost-mpi-python1.67-dev libboost-numpy1.67-dev
libboost-program-options1.67-dev libboost-python1.67-dev
libboost-random1.67-dev libboost-regex1.67-dev
libboost-serialization1.67-dev libboost-signals1.67-dev
libboost-stacktrace1.67-dev libboost-system1.67-dev libboost-test1.67-dev
libboost-thread1.67-dev libboost-timer1.67-dev libboost-type-erasure1.67-dev
libboost-wave1.67-dev libboost1.67-tools-dev libmpfrc++-dev libntl-dev
cups-common libcurl4-doc libidn11-dev libkrb5-dev libldap2-dev librtmp-dev
libssh2-1-dev libeigen3-doc libfftw3-doc freetype2-doc libgdal-doc
libgeotiff-epsg geotiff-bin gdal-bin glew-utils gmp-doc libgmp10-doc
libmpfr-dev dns-root-data gnutls-bin gnutls-doc krb5-doc krb5-user
libvisual-0.4-plugins gstreamer1.0-tools libhdf4-doc hdf4-tools libhdf5-doc
libice-doc icu-doc liblcms2-utils libtool-doc liblzma-doc netcdf-bin
netcdf-doc libmyodbc odbc-postgresql tdsodbc unixodbc-bin ogdi-bin
openmpi-doc opus-tools pciutils postgresql-doc-12 proj-bin
qt5-image-formats-plugins qtwayland5 librsvg2-bin lm-sensors libsm-doc speex
sqlite3-doc libsuperlu-doc gcj-jdk vtk7-doc vtk7-examples
java-virtual-machine libx11-doc libxcb-doc libxerces-c-doc libxext-doc
libxt-doc m4-doc apparmor less www-browser opencl-icd keychain libpam-ssh
monkeysphere ssh-askpass libmail-box-perl python3-doc python3-tk
python3-venv python-attr-doc python-cryptography-doc
python3-cryptography-vectors docutils-doc fonts-linuxlibertine
| ttf-linux-libertine texlive-lang-french texlive-latex-base
texlive-latex-recommended python-jinja2-doc python3-numpy python-nacl-doc
python-openssl-doc python3-openssl-dbg python3-setuptools
python-pygments-doc ttf-bitstream-vera python-pyparsing-doc python3-socks
dvipng imagemagick-6.q16 latexmk libjs-mathjax python3-sphinx-rtd-theme
python3-stemmer sphinx-doc texlive-fonts-recommended texlive-latex-extra
texlive-plain-generic python-trie-doc python3-gtk2 python3-glade2
python3-pampy python3-qt4 python3-serial python3-wxgtk2.8
python3-twisted-bin-dbg python-txaio-doc mayavi2 python3.7-venv
python3.7-doc binfmt-support python3.8-venv python3.8-doc qt5-doc
firebird-dev sgml-base-doc tcl-doc tcl-tclreadline tcl8.6-doc tk-doc
tk8.6-doc
Recommended packages:
curl | wget | lynx libaacs0 libcfitsio-doc dbus libarchive-cpio-perl
proj-bin libgdk-pixbuf2.0-bin libglib2.0-data xdg-user-dirs
gstreamer1.0-plugins-base javascript-common krb5-locales libgpm2
libcoarrays-openmpi-dev libpng-tools poppler-data publicsuffix
qttranslations5-l10n libqt5svg5 qt5-gtk-platformtheme geoclue-2.0
librsvg2-common libtasn1-doc va-driver-all | va-driver vdpau-driver-all
| vdpau-driver mesa-vulkan-drivers | vulkan-icd libwacom-bin xauth
libmail-sendmail-perl psmisc libpaper-utils python3-pil python3-click
python3-png xterm | x-terminal-emulator
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils ca-certificates cmake
cmake-data cython3 debhelper default-libmysqlclient-dev dh-autoreconf
dh-python dh-strip-nondeterminism docutils-common dwz file fontconfig
fontconfig-config fonts-dejavu-core gdal-data gettext gettext-base gfortran
gfortran-9 groff-base hdf5-helpers ibverbs-providers icu-devtools
intltool-debian iso-codes libaec-dev libaec0 libaom0 libarchive-zip-perl
libarchive13 libarmadillo-dev libarmadillo9 libarpack2 libarpack2-dev
libavahi-client3 libavahi-common-data libavahi-common3 libavcodec-dev
libavcodec58 libavformat-dev libavformat58 libavutil-dev libavutil56
libblas-dev libblas3 libbluray2 libboost-dev libboost1.67-dev libbrotli1
libbsd0 libcairo2 libcfitsio-dev libcfitsio8 libcharls-dev libcharls2
libchromaprint1 libclang1-8 libcodec2-0.9 libcroco3 libcups2 libcurl3-gnutls
libcurl4-gnutls-dev libdap-dev libdap25 libdapclient6v5 libdapserver7v5
libdatrie1 libdbus-1-3 libdebhelper-perl libdouble-conversion3
libdrm-amdgpu1 libdrm-common libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2
libegl-dev libegl-mesa0 libegl1 libeigen3-dev libelf1 libepsilon-dev
libepsilon1 libevdev2 libevent-2.1-7 libevent-core-2.1-7 libevent-dev
libevent-extra-2.1-7 libevent-openssl-2.1-7 libevent-pthreads-2.1-7
libexpat1 libexpat1-dev libfftw3-bin libfftw3-dev libfftw3-double3
libfftw3-single3 libfile-stripnondeterminism-perl libfontconfig1
libfontconfig1-dev libfreetype-dev libfreetype6 libfreetype6-dev
libfreexl-dev libfreexl1 libfribidi0 libfyba-dev libfyba0 libgbm1
libgdal-dev libgdal26 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common
libgeos-3.8.0 libgeos-c1v5 libgeos-dev libgeotiff-dev libgeotiff5
libgfortran-9-dev libgfortran5 libgif-dev libgif7 libgl-dev libgl1
libgl1-mesa-dev libgl1-mesa-dri libgl2ps-dev libgl2ps1.4 libglapi-mesa
libgles-dev libgles1 libgles2 libglew-dev libglew2.1 libglib2.0-0
libglu1-mesa libglu1-mesa-dev libglvnd0 libglx-dev libglx-mesa0 libglx0
libgme0 libgmp-dev libgmpxx4ldbl libgnutls-dane0 libgnutls-openssl27
libgnutls28-dev libgnutlsxx28 libgraphite2-3 libgsm1 libgssapi-krb5-2
libgstreamer-plugins-base1.0-0 libgstreamer1.0-0 libgudev-1.0-0
libharfbuzz0b libhdf4-0-alt libhdf4-alt-dev libhdf5-103 libhdf5-cpp-103
libhdf5-dev libhdf5-mpi-dev libhdf5-openmpi-103 libhdf5-openmpi-dev
libhwloc-dev libhwloc-plugins libhwloc15 libhyphen0 libibverbs-dev
libibverbs1 libice-dev libice6 libicu-dev libicu63 libidn2-dev libinput-bin
libinput10 libjbig-dev libjbig0 libjpeg-dev libjpeg62-turbo
libjpeg62-turbo-dev libjs-jquery libjs-sphinxdoc libjs-underscore
libjson-c-dev libjson-c4 libjsoncpp-dev libjsoncpp1 libk5crypto3
libkeyutils1 libkim-api-dev libkim-api2 libkml-dev libkmlbase1
libkmlconvenience1 libkmldom1 libkmlengine1 libkmlregionator1 libkmlxsd1
libkrb5-3 libkrb5support0 liblapack-dev liblapack3 liblcms2-2 libllvm8
libllvm9 libltdl-dev libltdl7 liblzma-dev libmagic-mgc libmagic1
libmariadb-dev libmariadb-dev-compat libmariadb3 libminizip-dev libminizip1
libmp3lame0 libmpdec2 libmpg123-0 libmtdev1 libncurses6 libnetcdf-c++4
libnetcdf-cxx-legacy-dev libnetcdf-dev libnetcdf15 libnghttp2-14 libnl-3-200
libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnspr4 libnss3 libodbc1
libogdi-dev libogdi4.1 libogg-dev libogg0 libopenjp2-7 libopenjp2-7-dev
libopenmpi-dev libopenmpi3 libopenmpt0 libopus0 liborc-0.4-0 libp11-kit-dev
libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpciaccess0
libpcre16-3 libpcre2-16-0 libpcre3-dev libpcre32-3 libpcrecpp0v5
libpipeline1 libpixman-1-0 libpmix2 libpng-dev libpng16-16 libpoppler-dev
libpoppler-private-dev libpoppler82 libpopt0 libpq-dev libpq5 libprocps7
libproj-dev libproj15 libpsl5 libpthread-stubs0-dev libpython3-all-dev
libpython3-dev libpython3-stdlib libpython3.7 libpython3.7-dev
libpython3.7-minimal libpython3.7-stdlib libpython3.8 libpython3.8-dev
libpython3.8-minimal libpython3.8-stdlib libqhull-dev libqhull-r7 libqhull7
libqt5concurrent5 libqt5core5a libqt5dbus5 libqt5designer5
libqt5designercomponents5 libqt5gui5 libqt5help5 libqt5network5
libqt5opengl5 libqt5opengl5-dev libqt5positioning5 libqt5printsupport5
libqt5qml5 libqt5quick5 libqt5quickparticles5 libqt5quickshapes5
libqt5quicktest5 libqt5quickwidgets5 libqt5sensors5 libqt5sql5
libqt5sql5-sqlite libqt5test5 libqt5webchannel5 libqt5webkit5
libqt5webkit5-dev libqt5widgets5 libqt5x11extras5 libqt5xml5 librhash0
librsvg2-2 librtmp1 libsensors-config libsensors5 libshine3 libsigsegv2
libsm-dev libsm6 libsnappy1v5 libsodium23 libsoxr0 libspatialite-dev
libspatialite7 libspeex1 libsqlite3-dev libssh-gcrypt-4 libssh2-1 libssl1.1
libsub-override-perl libsuperlu-dev libsuperlu5 libswresample-dev
libswresample3 libswscale-dev libswscale5 libsymspg-dev libsymspg1 libsz2
libtasn1-6-dev libtcl8.6 libthai-data libthai0 libtheora-dev libtheora0
libtiff-dev libtiff5 libtiffxx5 libtinfo5 libtk8.6 libtool libtwolame0
libuchardet0 libunbound8 liburiparser-dev liburiparser1 libuv1 libva-drm2
libva-x11-2 libva2 libvdpau1 libvorbis0a libvorbisenc2 libvorbisfile3
libvoro++1 libvpx6 libvtk7-dev libvtk7-java libvtk7-jni libvtk7-qt-dev
libvtk7.1p libvtk7.1p-qt libvulkan-dev libvulkan1 libwacom-common libwacom2
libwavpack1 libwayland-client0 libwayland-server0 libwebp-dev libwebp6
libwebpdemux2 libwebpmux3 libwoff1 libx11-6 libx11-data libx11-dev
libx11-xcb1 libx264-155 libx265-179 libxau-dev libxau6 libxcb-dri2-0
libxcb-dri3-0 libxcb-glx0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1
libxcb-present0 libxcb-randr0 libxcb-render-util0 libxcb-render0
libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-util0 libxcb-xfixes0
libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxcb1 libxcb1-dev libxdamage1
libxdmcp-dev libxdmcp6 libxerces-c-dev libxerces-c3.2 libxext-dev libxext6
libxfixes3 libxft-dev libxft2 libxkbcommon-x11-0 libxkbcommon0 libxml2
libxml2-dev libxnvctrl0 libxrender-dev libxrender1 libxshmfence1 libxslt1.1
libxss-dev libxss1 libxt-dev libxt6 libxvidcore4 libxxf86vm1 libz3-4
libzstd-dev libzvbi-common libzvbi0 m4 man-db mariadb-common mime-support
mpi-default-bin mpi-default-dev mysql-common nettle-dev ocl-icd-libopencl1
ocl-icd-opencl-dev odbcinst odbcinst1debian2 opencl-c-headers openmpi-bin
openmpi-common openssh-client openssl pkg-config po-debconf procps proj-data
python-babel-localedata python3 python3-alabaster python3-all
python3-all-dev python3-asn1crypto python3-attr python3-autobahn
python3-automat python3-babel python3-cbor python3-certifi
python3-cffi-backend python3-chardet python3-constantly python3-cryptography
python3-dev python3-distutils python3-docutils python3-hyperlink
python3-idna python3-imagesize python3-incremental python3-jinja2
python3-lib2to3 python3-lz4 python3-markupsafe python3-minimal
python3-mpi4py python3-nacl python3-openssl python3-packaging
python3-pkg-resources python3-pyasn1 python3-pyasn1-modules python3-pygments
python3-pyparsing python3-pyqrcode python3-requests python3-roman
python3-service-identity python3-six python3-snappy python3-sphinx
python3-trie python3-twisted python3-twisted-bin python3-txaio python3-tz
python3-u-msgpack python3-ubjson python3-urllib3 python3-vtk7
python3-wsaccel python3-zope.interface python3.7 python3.7-dev
python3.7-minimal python3.8 python3.8-dev python3.8-minimal qdoc-qt5
qhelpgenerator-qt5 qt5-assistant qt5-qmake qt5-qmake-bin
qt5-qmltooling-plugins qtattributionsscanner-qt5 qtbase5-dev
qtbase5-dev-tools qtchooser qtdeclarative5-dev qtdeclarative5-dev-tools
qttools5-dev qttools5-dev-tools qttools5-private-dev
sbuild-build-depends-lammps-dummy sensible-utils sgml-base shared-mime-info
sphinx-common tcl tcl-dev tcl-vtk7 tcl8.6 tcl8.6-dev tk tk-dev tk8.6
tk8.6-dev ucf unixodbc-dev uuid-dev voro++-dev vtk7 x11-common
x11proto-core-dev x11proto-dev x11proto-scrnsaver-dev x11proto-xext-dev
xkb-data xml-core xorg-sgml-doctools xtrans-dev zlib1g-dev
0 upgraded, 574 newly installed, 0 to remove and 0 not upgraded.
Need to get 407 MB of archives.
After this operation, 2022 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-TZYsVk/apt_archive ./ sbuild-build-depends-lammps-dummy 0.invalid.0 [980 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libbsd0 armhf 0.10.0-1 [112 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf libtinfo5 armhf 6.1+20191019-1 [316 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-4 [783 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.2-2 [29.6 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.0-2 [1261 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf libglvnd0 armhf 1.3.0-7 [55.2 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf libdrm-common all 2.4.100-4+rpi1 [14.3 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf libdrm2 armhf 2.4.100-4+rpi1 [37.1 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf libexpat1 armhf 2.2.9-1 [71.5 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf libwayland-server0 armhf 1.17.0-1+b1 [26.8 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf libgbm1 armhf 19.3.2-1 [67.0 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf libglapi-mesa armhf 19.3.2-1 [78.8 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf libwayland-client0 armhf 1.17.0-1+b1 [21.9 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf libx11-xcb1 armhf 2:1.6.8-1 [190 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf libxcb1 armhf 1.13.1-2 [132 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf libxcb-dri2-0 armhf 1.13.1-2 [100 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf libxcb-dri3-0 armhf 1.13.1-2 [100 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf libxcb-present0 armhf 1.13.1-2 [99.1 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf libxcb-sync1 armhf 1.13.1-2 [102 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf libxcb-xfixes0 armhf 1.13.1-2 [103 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf libxshmfence1 armhf 1.3-1 [8636 B]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf libegl-mesa0 armhf 19.3.2-1 [120 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf libegl1 armhf 1.3.0-7 [28.7 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf libgles2 armhf 1.3.0-7 [20.2 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.62.4-1+rpi1 [1137 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf libgstreamer1.0-0 armhf 1.16.2-2 [2077 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf liborc-0.4-0 armhf 1:0.4.31-1 [150 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf iso-codes all 4.4-1 [2749 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf libgstreamer-plugins-base1.0-0 armhf 1.16.2-2 [2007 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf libhyphen0 armhf 2.8.8-7 [30.0 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf libicu63 armhf 63.2-2 [7974 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo armhf 1:1.5.2-2+b1 [110 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf libpng16-16 armhf 1.6.37-1 [274 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf libdouble-conversion3 armhf 3.1.5-5 [38.9 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-16-0 armhf 10.34-7 [190 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf libqt5core5a armhf 5.12.5+dfsg-7+rpi1 [1739 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf libfreetype6 armhf 2.10.1-2 [330 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf sensible-utils all 0.0.12+nmu1 [16.0 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf ucf all 3.0038+nmu1 [69.0 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf fonts-dejavu-core all 2.37-1 [1068 kB]
Get:46 http://172.17.0.1/private bullseye-staging/main armhf fontconfig-config all 2.13.1-2 [280 kB]
Get:47 http://172.17.0.1/private bullseye-staging/main armhf libfontconfig1 armhf 2.13.1-2 [327 kB]
Get:48 http://172.17.0.1/private bullseye-staging/main armhf fontconfig armhf 2.13.1-2 [404 kB]
Get:49 http://172.17.0.1/private bullseye-staging/main armhf libgraphite2-3 armhf 1.3.13-11 [70.1 kB]
Get:50 http://172.17.0.1/private bullseye-staging/main armhf libharfbuzz0b armhf 2.6.4-1+rpi1 [1308 kB]
Get:51 http://172.17.0.1/private bullseye-staging/main armhf x11-common all 1:7.7+20 [252 kB]
Get:52 http://172.17.0.1/private bullseye-staging/main armhf libice6 armhf 2:1.0.9-2 [51.6 kB]
Get:53 http://172.17.0.1/private bullseye-staging/main armhf libevdev2 armhf 1.8.0+dfsg-2 [26.7 kB]
Get:54 http://172.17.0.1/private bullseye-staging/main armhf libmtdev1 armhf 1.1.5-1.1 [21.3 kB]
Get:55 http://172.17.0.1/private bullseye-staging/main armhf libgudev-1.0-0 armhf 233-1 [11.9 kB]
Get:56 http://172.17.0.1/private bullseye-staging/main armhf libwacom-common all 1.1-2 [41.9 kB]
Get:57 http://172.17.0.1/private bullseye-staging/main armhf libwacom2 armhf 1.1-2 [17.6 kB]
Get:58 http://172.17.0.1/private bullseye-staging/main armhf libinput-bin armhf 1.14.3-1 [17.3 kB]
Get:59 http://172.17.0.1/private bullseye-staging/main armhf libinput10 armhf 1.14.3-1 [96.9 kB]
Get:60 http://172.17.0.1/private bullseye-staging/main armhf libdbus-1-3 armhf 1.12.16-2+b1 [189 kB]
Get:61 http://172.17.0.1/private bullseye-staging/main armhf libqt5dbus5 armhf 5.12.5+dfsg-7+rpi1 [211 kB]
Get:62 http://172.17.0.1/private bullseye-staging/main armhf libssl1.1 armhf 1.1.1d-2 [1268 kB]
Get:63 http://172.17.0.1/private bullseye-staging/main armhf libqt5network5 armhf 5.12.5+dfsg-7+rpi1 [593 kB]
Get:64 http://172.17.0.1/private bullseye-staging/main armhf libsm6 armhf 2:1.2.3-1 [32.9 kB]
Get:65 http://172.17.0.1/private bullseye-staging/main armhf libx11-data all 2:1.6.8-1 [298 kB]
Get:66 http://172.17.0.1/private bullseye-staging/main armhf libx11-6 armhf 2:1.6.8-1 [691 kB]
Get:67 http://172.17.0.1/private bullseye-staging/main armhf libxcb-icccm4 armhf 0.4.1-1.1 [26.3 kB]
Get:68 http://172.17.0.1/private bullseye-staging/main armhf libxcb-shm0 armhf 1.13.1-2 [99.3 kB]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf libxcb-util0 armhf 0.3.8-3+b2 [21.9 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf libxcb-image0 armhf 0.4.0-1+b2 [23.3 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf libxcb-keysyms1 armhf 0.4.0-1+b2 [15.9 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf libxcb-randr0 armhf 1.13.1-2 [109 kB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf libxcb-render0 armhf 1.13.1-2 [108 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf libxcb-render-util0 armhf 0.3.9-1+b1 [17.3 kB]
Get:75 http://172.17.0.1/private bullseye-staging/main armhf libxcb-shape0 armhf 1.13.1-2 [99.5 kB]
Get:76 http://172.17.0.1/private bullseye-staging/main armhf libxcb-xinerama0 armhf 1.13.1-2 [98.8 kB]
Get:77 http://172.17.0.1/private bullseye-staging/main armhf libxcb-xinput0 armhf 1.13.1-2 [121 kB]
Get:78 http://172.17.0.1/private bullseye-staging/main armhf libxcb-xkb1 armhf 1.13.1-2 [120 kB]
Get:79 http://172.17.0.1/private bullseye-staging/main armhf xkb-data all 2.26-2 [681 kB]
Get:80 http://172.17.0.1/private bullseye-staging/main armhf libxkbcommon0 armhf 0.9.1-1 [110 kB]
Get:81 http://172.17.0.1/private bullseye-staging/main armhf libxkbcommon-x11-0 armhf 0.9.1-1 [38.2 kB]
Get:82 http://172.17.0.1/private bullseye-staging/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get:83 http://172.17.0.1/private bullseye-staging/main armhf libqt5gui5 armhf 5.12.5+dfsg-7+rpi1 [2321 kB]
Get:84 http://172.17.0.1/private bullseye-staging/main armhf libqt5positioning5 armhf 5.12.5+dfsg-2 [169 kB]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf libavahi-common-data armhf 0.7-5 [122 kB]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf libavahi-common3 armhf 0.7-5 [51.2 kB]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf libavahi-client3 armhf 0.7-5 [54.2 kB]
Get:88 http://172.17.0.1/private bullseye-staging/main armhf libkeyutils1 armhf 1.6-6 [14.0 kB]
Get:89 http://172.17.0.1/private bullseye-staging/main armhf libkrb5support0 armhf 1.17-6+b1 [61.5 kB]
Get:90 http://172.17.0.1/private bullseye-staging/main armhf libk5crypto3 armhf 1.17-6+b1 [112 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf libkrb5-3 armhf 1.17-6+b1 [316 kB]
Get:92 http://172.17.0.1/private bullseye-staging/main armhf libgssapi-krb5-2 armhf 1.17-6+b1 [134 kB]
Get:93 http://172.17.0.1/private bullseye-staging/main armhf libcups2 armhf 2.3.1-4 [309 kB]
Get:94 http://172.17.0.1/private bullseye-staging/main armhf libqt5widgets5 armhf 5.12.5+dfsg-7+rpi1 [2011 kB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf libqt5printsupport5 armhf 5.12.5+dfsg-7+rpi1 [205 kB]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf libqt5qml5 armhf 5.12.5-5 [1206 kB]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf libqt5quick5 armhf 5.12.5-5 [1119 kB]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf libqt5sensors5 armhf 5.12.5-2 [96.3 kB]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf libqt5webchannel5 armhf 5.12.5-2 [45.3 kB]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf libwebp6 armhf 0.6.1-2 [228 kB]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf libbrotli1 armhf 1.0.7-6 [261 kB]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf libwoff1 armhf 1.0.2-1 [36.1 kB]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.4+dfsg1-8 [593 kB]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf libxslt1.1 armhf 1.1.32-2.2 [215 kB]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf libqt5webkit5 armhf 5.212.0~alpha3-6+rpi1 [8688 kB]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf libxcb-glx0 armhf 1.13.1-2 [114 kB]
Get:107 http://172.17.0.1/private bullseye-staging/main armhf libxfixes3 armhf 1:5.0.3-1 [20.6 kB]
Get:108 http://172.17.0.1/private bullseye-staging/main armhf libxdamage1 armhf 1:1.1.5-1 [15.1 kB]
Get:109 http://172.17.0.1/private bullseye-staging/main armhf libxext6 armhf 2:1.3.3-1+b2 [47.8 kB]
Get:110 http://172.17.0.1/private bullseye-staging/main armhf libxxf86vm1 armhf 1:1.1.4-1+b2 [20.1 kB]
Get:111 http://172.17.0.1/private bullseye-staging/main armhf libdrm-amdgpu1 armhf 2.4.100-4+rpi1 [27.0 kB]
Get:112 http://172.17.0.1/private bullseye-staging/main armhf libdrm-nouveau2 armhf 2.4.100-4+rpi1 [24.7 kB]
Get:113 http://172.17.0.1/private bullseye-staging/main armhf libdrm-radeon1 armhf 2.4.100-4+rpi1 [28.9 kB]
Get:114 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.176-1.1 [158 kB]
Get:115 http://172.17.0.1/private bullseye-staging/main armhf libedit2 armhf 3.1-20191231-1 [79.2 kB]
Get:116 http://172.17.0.1/private bullseye-staging/main armhf libz3-4 armhf 4.8.7-4 [5477 kB]
Get:117 http://172.17.0.1/private bullseye-staging/main armhf libllvm9 armhf 1:9.0.1-8+rpi1 [13.1 MB]
Get:118 http://172.17.0.1/private bullseye-staging/main armhf libsensors-config all 1:3.6.0-2 [32.0 kB]
Get:119 http://172.17.0.1/private bullseye-staging/main armhf libsensors5 armhf 1:3.6.0-2 [50.2 kB]
Get:120 http://172.17.0.1/private bullseye-staging/main armhf libgl1-mesa-dri armhf 19.3.2-1 [5676 kB]
Get:121 http://172.17.0.1/private bullseye-staging/main armhf libglx-mesa0 armhf 19.3.2-1 [169 kB]
Get:122 http://172.17.0.1/private bullseye-staging/main armhf libglx0 armhf 1.3.0-7 [25.7 kB]
Get:123 http://172.17.0.1/private bullseye-staging/main armhf libgl1 armhf 1.3.0-7 [105 kB]
Get:124 http://172.17.0.1/private bullseye-staging/main armhf xorg-sgml-doctools all 1:1.11-1 [21.9 kB]
Get:125 http://172.17.0.1/private bullseye-staging/main armhf x11proto-dev all 2018.4-4 [251 kB]
Get:126 http://172.17.0.1/private bullseye-staging/main armhf x11proto-core-dev all 2018.4-4 [3128 B]
Get:127 http://172.17.0.1/private bullseye-staging/main armhf libxau-dev armhf 1:1.0.8-1+b2 [22.4 kB]
Get:128 http://172.17.0.1/private bullseye-staging/main armhf libxdmcp-dev armhf 1:1.1.2-3 [40.9 kB]
Get:129 http://172.17.0.1/private bullseye-staging/main armhf xtrans-dev all 1.3.5-1 [100 kB]
Get:130 http://172.17.0.1/private bullseye-staging/main armhf libpthread-stubs0-dev armhf 0.4-1 [5344 B]
Get:131 http://172.17.0.1/private bullseye-staging/main armhf libxcb1-dev armhf 1.13.1-2 [169 kB]
Get:132 http://172.17.0.1/private bullseye-staging/main armhf libx11-dev armhf 2:1.6.8-1 [760 kB]
Get:133 http://172.17.0.1/private bullseye-staging/main armhf libglx-dev armhf 1.3.0-7 [16.2 kB]
Get:134 http://172.17.0.1/private bullseye-staging/main armhf libgl-dev armhf 1.3.0-7 [100 kB]
Get:135 http://172.17.0.1/private bullseye-staging/main armhf libegl-dev armhf 1.3.0-7 [19.1 kB]
Get:136 http://172.17.0.1/private bullseye-staging/main armhf libgles1 armhf 1.3.0-7 [13.1 kB]
Get:137 http://172.17.0.1/private bullseye-staging/main armhf libgles-dev armhf 1.3.0-7 [50.2 kB]
Get:138 http://172.17.0.1/private bullseye-staging/main armhf libqt5concurrent5 armhf 5.12.5+dfsg-7+rpi1 [62.7 kB]
Get:139 http://172.17.0.1/private bullseye-staging/main armhf libqt5sql5 armhf 5.12.5+dfsg-7+rpi1 [135 kB]
Get:140 http://172.17.0.1/private bullseye-staging/main armhf libqt5test5 armhf 5.12.5+dfsg-7+rpi1 [146 kB]
Get:141 http://172.17.0.1/private bullseye-staging/main armhf libqt5xml5 armhf 5.12.5+dfsg-7+rpi1 [123 kB]
Get:142 http://172.17.0.1/private bullseye-staging/main armhf libvulkan1 armhf 1.1.126.0-2 [78.8 kB]
Get:143 http://172.17.0.1/private bullseye-staging/main armhf libvulkan-dev armhf 1.1.126.0-2 [472 kB]
Get:144 http://172.17.0.1/private bullseye-staging/main armhf x11proto-xext-dev all 2018.4-4 [3128 B]
Get:145 http://172.17.0.1/private bullseye-staging/main armhf libxext-dev armhf 2:1.3.3-1+b2 [102 kB]
Get:146 http://172.17.0.1/private bullseye-staging/main armhf qt5-qmake-bin armhf 5.12.5+dfsg-7+rpi1 [806 kB]
Get:147 http://172.17.0.1/private bullseye-staging/main armhf qtchooser armhf 66-2 [23.1 kB]
Get:148 http://172.17.0.1/private bullseye-staging/main armhf qt5-qmake armhf 5.12.5+dfsg-7+rpi1 [229 kB]
Get:149 http://172.17.0.1/private bullseye-staging/main armhf qtbase5-dev-tools armhf 5.12.5+dfsg-7+rpi1 [621 kB]
Get:150 http://172.17.0.1/private bullseye-staging/main armhf qtbase5-dev armhf 5.12.5+dfsg-7+rpi1 [985 kB]
Get:151 http://172.17.0.1/private bullseye-staging/main armhf libqt5quickparticles5 armhf 5.12.5-5 [162 kB]
Get:152 http://172.17.0.1/private bullseye-staging/main armhf libqt5quickshapes5 armhf 5.12.5-5 [77.2 kB]
Get:153 http://172.17.0.1/private bullseye-staging/main armhf libqt5quicktest5 armhf 5.12.5-5 [72.1 kB]
Get:154 http://172.17.0.1/private bullseye-staging/main armhf libqt5quickwidgets5 armhf 5.12.5-5 [48.5 kB]
Get:155 http://172.17.0.1/private bullseye-staging/main armhf qt5-qmltooling-plugins armhf 5.12.5-5 [165 kB]
Get:156 http://172.17.0.1/private bullseye-staging/main armhf qtdeclarative5-dev-tools armhf 5.12.5-5 [371 kB]
Get:157 http://172.17.0.1/private bullseye-staging/main armhf qtdeclarative5-dev armhf 5.12.5-5 [342 kB]
Get:158 http://172.17.0.1/private bullseye-staging/main armhf libqt5webkit5-dev armhf 5.212.0~alpha3-6+rpi1 [61.0 kB]
Get:159 http://172.17.0.1/private bullseye-staging/main armhf libpython3.7-minimal armhf 3.7.6-1+b1 [585 kB]
Get:160 http://172.17.0.1/private bullseye-staging/main armhf python3.7-minimal armhf 3.7.6-1+b1 [1525 kB]
Get:161 http://172.17.0.1/private bullseye-staging/main armhf python3-minimal armhf 3.7.5-3 [36.8 kB]
Get:162 http://172.17.0.1/private bullseye-staging/main armhf mime-support all 3.64 [37.8 kB]
Get:163 http://172.17.0.1/private bullseye-staging/main armhf libmpdec2 armhf 2.4.2-2 [67.2 kB]
Get:164 http://172.17.0.1/private bullseye-staging/main armhf libpython3.7-stdlib armhf 3.7.6-1+b1 [1669 kB]
Get:165 http://172.17.0.1/private bullseye-staging/main armhf python3.7 armhf 3.7.6-1+b1 [351 kB]
Get:166 http://172.17.0.1/private bullseye-staging/main armhf libpython3-stdlib armhf 3.7.5-3 [20.2 kB]
Get:167 http://172.17.0.1/private bullseye-staging/main armhf python3 armhf 3.7.5-3 [62.1 kB]
Get:168 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8-minimal armhf 3.8.1-2+b1 [743 kB]
Get:169 http://172.17.0.1/private bullseye-staging/main armhf python3.8-minimal armhf 3.8.1-2+b1 [1621 kB]
Get:170 http://172.17.0.1/private bullseye-staging/main armhf sgml-base all 1.29.1 [15.0 kB]
Get:171 http://172.17.0.1/private bullseye-staging/main armhf libncurses6 armhf 6.1+20191019-1 [79.5 kB]
Get:172 http://172.17.0.1/private bullseye-staging/main armhf libprocps7 armhf 2:3.3.15-2 [58.9 kB]
Get:173 http://172.17.0.1/private bullseye-staging/main armhf procps armhf 2:3.3.15-2 [235 kB]
Get:174 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.38-4 [262 kB]
Get:175 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.38-4 [112 kB]
Get:176 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.38-4 [66.9 kB]
Get:177 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:178 http://172.17.0.1/private bullseye-staging/main armhf openssh-client armhf 1:8.1p1-5 [713 kB]
Get:179 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:180 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:181 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11.1 [341 kB]
Get:182 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:183 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.1-4 [771 kB]
Get:184 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
Get:185 http://172.17.0.1/private bullseye-staging/main armhf openssl armhf 1.1.1d-2 [806 kB]
Get:186 http://172.17.0.1/private bullseye-staging/main armhf ca-certificates all 20190110 [157 kB]
Get:187 http://172.17.0.1/private bullseye-staging/main armhf cmake-data all 3.15.4-1+rpi1 [1580 kB]
Get:188 http://172.17.0.1/private bullseye-staging/main armhf libarchive13 armhf 3.4.0-1+b1 [292 kB]
Get:189 http://172.17.0.1/private bullseye-staging/main armhf libnghttp2-14 armhf 1.40.0-1+b2 [74.2 kB]
Get:190 http://172.17.0.1/private bullseye-staging/main armhf libpsl5 armhf 0.20.2-2 [52.6 kB]
Get:191 http://172.17.0.1/private bullseye-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b1 [54.3 kB]
Get:192 http://172.17.0.1/private bullseye-staging/main armhf libssh2-1 armhf 1.8.0-2.1 [126 kB]
Get:193 http://172.17.0.1/private bullseye-staging/main armhf libcurl3-gnutls armhf 7.67.0-2 [284 kB]
Get:194 http://172.17.0.1/private bullseye-staging/main armhf libjsoncpp1 armhf 1.7.4-3.1 [65.8 kB]
Get:195 http://172.17.0.1/private bullseye-staging/main armhf librhash0 armhf 1.3.9-1 [133 kB]
Get:196 http://172.17.0.1/private bullseye-staging/main armhf libuv1 armhf 1.33.1-2 [112 kB]
Get:197 http://172.17.0.1/private bullseye-staging/main armhf cmake armhf 3.15.4-1+rpi1 [2540 kB]
Get:198 http://172.17.0.1/private bullseye-staging/main armhf cython3 armhf 0.29.14-0.1 [1375 kB]
Get:199 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-11 [547 kB]
Get:200 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:201 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 12.9 [183 kB]
Get:202 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.67-1 [104 kB]
Get:203 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:204 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.6.3-2 [23.7 kB]
Get:205 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.6.3-2 [14.7 kB]
Get:206 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-5 [142 kB]
Get:207 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:208 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-10 [1219 kB]
Get:209 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:210 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:211 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 12.9 [994 kB]
Get:212 http://172.17.0.1/private bullseye-staging/main armhf mysql-common all 5.8+1.0.5 [7324 B]
Get:213 http://172.17.0.1/private bullseye-staging/main armhf mariadb-common all 1:10.3.22-1 [32.3 kB]
Get:214 http://172.17.0.1/private bullseye-staging/main armhf libmariadb3 armhf 1:10.3.22-1 [158 kB]
Get:215 http://172.17.0.1/private bullseye-staging/main armhf libevent-2.1-7 armhf 2.1.11-stable-1 [165 kB]
Get:216 http://172.17.0.1/private bullseye-staging/main armhf libunbound8 armhf 1.9.6-1 [413 kB]
Get:217 http://172.17.0.1/private bullseye-staging/main armhf libgnutls-dane0 armhf 3.6.11.1-2 [339 kB]
Get:218 http://172.17.0.1/private bullseye-staging/main armhf libgnutls-openssl27 armhf 3.6.11.1-2 [339 kB]
Get:219 http://172.17.0.1/private bullseye-staging/main armhf libgnutlsxx28 armhf 3.6.11.1-2 [11.9 kB]
Get:220 http://172.17.0.1/private bullseye-staging/main armhf libidn2-dev armhf 2.2.0-2 [81.3 kB]
Get:221 http://172.17.0.1/private bullseye-staging/main armhf libp11-kit-dev armhf 0.23.18.1-2+b1 [202 kB]
Get:222 http://172.17.0.1/private bullseye-staging/main armhf libtasn1-6-dev armhf 4.15.0-2 [94.9 kB]
Get:223 http://172.17.0.1/private bullseye-staging/main armhf libgmpxx4ldbl armhf 2:6.1.2+dfsg-4 [21.8 kB]
Get:224 http://172.17.0.1/private bullseye-staging/main armhf libgmp-dev armhf 2:6.1.2+dfsg-4 [570 kB]
Get:225 http://172.17.0.1/private bullseye-staging/main armhf nettle-dev armhf 3.5.1+really3.5.1-2 [1116 kB]
Get:226 http://172.17.0.1/private bullseye-staging/main armhf libgnutls28-dev armhf 3.6.11.1-2 [1054 kB]
Get:227 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-1 [206 kB]
Get:228 http://172.17.0.1/private bullseye-staging/main armhf libmariadb-dev armhf 1:10.3.22-1 [998 kB]
Get:229 http://172.17.0.1/private bullseye-staging/main armhf libmariadb-dev-compat armhf 1:10.3.22-1 [31.5 kB]
Get:230 http://172.17.0.1/private bullseye-staging/main armhf default-libmysqlclient-dev armhf 1.0.5+b5 [4044 B]
Get:231 http://172.17.0.1/private bullseye-staging/main armhf python3-lib2to3 all 3.8.0-1 [78.3 kB]
Get:232 http://172.17.0.1/private bullseye-staging/main armhf python3-distutils all 3.8.0-1 [145 kB]
Get:233 http://172.17.0.1/private bullseye-staging/main armhf dh-python all 4.20191017 [94.4 kB]
Get:234 http://172.17.0.1/private bullseye-staging/main armhf xml-core all 0.18+nmu1 [23.8 kB]
Get:235 http://172.17.0.1/private bullseye-staging/main armhf docutils-common all 0.16+dfsg-1 [129 kB]
Get:236 http://172.17.0.1/private bullseye-staging/main armhf gdal-data all 3.0.3+dfsg-1 [429 kB]
Get:237 http://172.17.0.1/private bullseye-staging/main armhf libgfortran5 armhf 9.2.1-25+rpi1 [231 kB]
Get:238 http://172.17.0.1/private bullseye-staging/main armhf libgfortran-9-dev armhf 9.2.1-25+rpi1 [279 kB]
Get:239 http://172.17.0.1/private bullseye-staging/main armhf gfortran-9 armhf 9.2.1-25+rpi1 [8095 kB]
Get:240 http://172.17.0.1/private bullseye-staging/main armhf gfortran armhf 4:9.2.1-3.1+rpi1 [1440 B]
Get:241 http://172.17.0.1/private bullseye-staging/main armhf hdf5-helpers armhf 1.10.4+repack-10 [35.2 kB]
Get:242 http://172.17.0.1/private bullseye-staging/main armhf libnl-3-200 armhf 3.4.0-1 [55.0 kB]
Get:243 http://172.17.0.1/private bullseye-staging/main armhf libnl-route-3-200 armhf 3.4.0-1 [132 kB]
Get:244 http://172.17.0.1/private bullseye-staging/main armhf libibverbs1 armhf 27.0-2 [47.2 kB]
Get:245 http://172.17.0.1/private bullseye-staging/main armhf ibverbs-providers armhf 27.0-2 [24.1 kB]
Get:246 http://172.17.0.1/private bullseye-staging/main armhf icu-devtools armhf 63.2-2 [163 kB]
Get:247 http://172.17.0.1/private bullseye-staging/main armhf libaec0 armhf 1.0.4-1 [20.0 kB]
Get:248 http://172.17.0.1/private bullseye-staging/main armhf libsz2 armhf 1.0.4-1 [6664 B]
Get:249 http://172.17.0.1/private bullseye-staging/main armhf libaec-dev armhf 1.0.4-1 [17.8 kB]
Get:250 http://172.17.0.1/private bullseye-staging/main armhf libaom0 armhf 1.0.0.errata1-3 [793 kB]
Get:251 http://172.17.0.1/private bullseye-staging/main armhf libblas3 armhf 3.9.0-1 [108 kB]
Get:252 http://172.17.0.1/private bullseye-staging/main armhf liblapack3 armhf 3.9.0-1 [1597 kB]
Get:253 http://172.17.0.1/private bullseye-staging/main armhf libarpack2 armhf 3.7.0-3 [85.7 kB]
Get:254 http://172.17.0.1/private bullseye-staging/main armhf libsuperlu5 armhf 5.2.1+dfsg1-4 [126 kB]
Get:255 http://172.17.0.1/private bullseye-staging/main armhf libarmadillo9 armhf 1:9.800.4+dfsg-1 [93.4 kB]
Get:256 http://172.17.0.1/private bullseye-staging/main armhf libblas-dev armhf 3.9.0-1 [113 kB]
Get:257 http://172.17.0.1/private bullseye-staging/main armhf liblapack-dev armhf 3.9.0-1 [2981 kB]
Get:258 http://172.17.0.1/private bullseye-staging/main armhf libarpack2-dev armhf 3.7.0-3 [96.2 kB]
Get:259 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-103 armhf 1.10.4+repack-10 [1259 kB]
Get:260 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo-dev armhf 1:1.5.2-2+b1 [179 kB]
Get:261 http://172.17.0.1/private bullseye-staging/main armhf libjpeg-dev all 1:1.5.2-2 [57.5 kB]
Get:262 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-cpp-103 armhf 1.10.4+repack-10 [121 kB]
Get:263 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-dev armhf 1.10.4+repack-10 [2221 kB]
Get:264 http://172.17.0.1/private bullseye-staging/main armhf libsuperlu-dev armhf 5.2.1+dfsg1-4 [18.4 kB]
Get:265 http://172.17.0.1/private bullseye-staging/main armhf libarmadillo-dev armhf 1:9.800.4+dfsg-1 [379 kB]
Get:266 http://172.17.0.1/private bullseye-staging/main armhf libva2 armhf 2.6.1-1 [53.9 kB]
Get:267 http://172.17.0.1/private bullseye-staging/main armhf libva-drm2 armhf 2.6.1-1 [17.1 kB]
Get:268 http://172.17.0.1/private bullseye-staging/main armhf libva-x11-2 armhf 2.6.1-1 [20.4 kB]
Get:269 http://172.17.0.1/private bullseye-staging/main armhf libvdpau1 armhf 1.3-1+b3 [27.3 kB]
Get:270 http://172.17.0.1/private bullseye-staging/main armhf ocl-icd-libopencl1 armhf 2.2.12-2 [35.7 kB]
Get:271 http://172.17.0.1/private bullseye-staging/main armhf libavutil56 armhf 7:4.2.2-1 [278 kB]
Get:272 http://172.17.0.1/private bullseye-staging/main armhf libpixman-1-0 armhf 0.36.0-1 [458 kB]
Get:273 http://172.17.0.1/private bullseye-staging/main armhf libcairo2 armhf 1.16.0-4 [599 kB]
Get:274 http://172.17.0.1/private bullseye-staging/main armhf libcodec2-0.9 armhf 0.9.2-2 [7862 kB]
Get:275 http://172.17.0.1/private bullseye-staging/main armhf libgsm1 armhf 1.0.18-2 [26.7 kB]
Get:276 http://172.17.0.1/private bullseye-staging/main armhf libmp3lame0 armhf 3.100-3 [347 kB]
Get:277 http://172.17.0.1/private bullseye-staging/main armhf libopenjp2-7 armhf 2.3.1-1 [140 kB]
Get:278 http://172.17.0.1/private bullseye-staging/main armhf libopus0 armhf 1.3-1 [169 kB]
Get:279 http://172.17.0.1/private bullseye-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:280 http://172.17.0.1/private bullseye-staging/main armhf libtiff5 armhf 4.1.0+git191117-2 [250 kB]
Get:281 http://172.17.0.1/private bullseye-staging/main armhf shared-mime-info armhf 1.10-1 [762 kB]
Get:282 http://172.17.0.1/private bullseye-staging/main armhf libgdk-pixbuf2.0-common all 2.40.0+dfsg-2+rpi1 [317 kB]
Get:283 http://172.17.0.1/private bullseye-staging/main armhf libgdk-pixbuf2.0-0 armhf 2.40.0+dfsg-2+rpi1 [158 kB]
Get:284 http://172.17.0.1/private bullseye-staging/main armhf libfribidi0 armhf 1.0.7-1.1 [62.8 kB]
Get:285 http://172.17.0.1/private bullseye-staging/main armhf libthai-data all 0.1.28-3 [170 kB]
Get:286 http://172.17.0.1/private bullseye-staging/main armhf libdatrie1 armhf 0.2.12-3+b1 [36.4 kB]
Get:287 http://172.17.0.1/private bullseye-staging/main armhf libthai0 armhf 0.1.28-3 [51.0 kB]
Get:288 http://172.17.0.1/private bullseye-staging/main armhf libpango-1.0-0 armhf 1.42.4-7+b1 [168 kB]
Get:289 http://172.17.0.1/private bullseye-staging/main armhf libpangoft2-1.0-0 armhf 1.42.4-7+b1 [62.2 kB]
Get:290 http://172.17.0.1/private bullseye-staging/main armhf libpangocairo-1.0-0 armhf 1.42.4-7+b1 [51.9 kB]
Get:291 http://172.17.0.1/private bullseye-staging/main armhf librsvg2-2 armhf 2.46.4-1 [1071 kB]
Get:292 http://172.17.0.1/private bullseye-staging/main armhf libshine3 armhf 3.1.1-2+b1 [22.0 kB]
Get:293 http://172.17.0.1/private bullseye-staging/main armhf libsnappy1v5 armhf 1.1.8-1 [16.7 kB]
Get:294 http://172.17.0.1/private bullseye-staging/main armhf libspeex1 armhf 1.2~rc1.2-1.1 [51.7 kB]
Get:295 http://172.17.0.1/private bullseye-staging/main armhf libsoxr0 armhf 0.1.3-1+rpi1 [52.6 kB]
Get:296 http://172.17.0.1/private bullseye-staging/main armhf libswresample3 armhf 7:4.2.2-1 [93.0 kB]
Get:297 http://172.17.0.1/private bullseye-staging/main armhf libogg0 armhf 1.3.2-1+b2 [16.2 kB]
Get:298 http://172.17.0.1/private bullseye-staging/main armhf libtheora0 armhf 1.1.1+dfsg.1-15 [148 kB]
Get:299 http://172.17.0.1/private bullseye-staging/main armhf libtwolame0 armhf 0.4.0-2 [46.8 kB]
Get:300 http://172.17.0.1/private bullseye-staging/main armhf libvorbis0a armhf 1.3.6-2 [82.4 kB]
Get:301 http://172.17.0.1/private bullseye-staging/main armhf libvorbisenc2 armhf 1.3.6-2 [74.0 kB]
Get:302 http://172.17.0.1/private bullseye-staging/main armhf libvpx6 armhf 1.8.2-1 [1136 kB]
Get:303 http://172.17.0.1/private bullseye-staging/main armhf libwavpack1 armhf 5.2.0-1 [74.7 kB]
Get:304 http://172.17.0.1/private bullseye-staging/main armhf libwebpmux3 armhf 0.6.1-2 [94.2 kB]
Get:305 http://172.17.0.1/private bullseye-staging/main armhf libx264-155 armhf 2:0.155.2917+git0a84d98-2+rpi1 [713 kB]
Get:306 http://172.17.0.1/private bullseye-staging/main armhf libx265-179 armhf 3.2.1-1 [539 kB]
Get:307 http://172.17.0.1/private bullseye-staging/main armhf libxvidcore4 armhf 2:1.3.6-1 [196 kB]
Get:308 http://172.17.0.1/private bullseye-staging/main armhf libzvbi-common all 0.2.35-16 [64.3 kB]
Get:309 http://172.17.0.1/private bullseye-staging/main armhf libzvbi0 armhf 0.2.35-16 [237 kB]
Get:310 http://172.17.0.1/private bullseye-staging/main armhf libavcodec58 armhf 7:4.2.2-1 [4512 kB]
Get:311 http://172.17.0.1/private bullseye-staging/main armhf libavutil-dev armhf 7:4.2.2-1 [407 kB]
Get:312 http://172.17.0.1/private bullseye-staging/main armhf libswresample-dev armhf 7:4.2.2-1 [102 kB]
Get:313 http://172.17.0.1/private bullseye-staging/main armhf libavcodec-dev armhf 7:4.2.2-1 [5053 kB]
Get:314 http://172.17.0.1/private bullseye-staging/main armhf libbluray2 armhf 1:1.1.2-2 [128 kB]
Get:315 http://172.17.0.1/private bullseye-staging/main armhf libchromaprint1 armhf 1.4.3-3 [36.1 kB]
Get:316 http://172.17.0.1/private bullseye-staging/main armhf libgme0 armhf 0.6.2-1 [108 kB]
Get:317 http://172.17.0.1/private bullseye-staging/main armhf libmpg123-0 armhf 1.25.13-1 [120 kB]
Get:318 http://172.17.0.1/private bullseye-staging/main armhf libvorbisfile3 armhf 1.3.6-2 [24.6 kB]
Get:319 http://172.17.0.1/private bullseye-staging/main armhf libopenmpt0 armhf 0.4.11-1 [533 kB]
Get:320 http://172.17.0.1/private bullseye-staging/main armhf libssh-gcrypt-4 armhf 0.9.3-2 [185 kB]
Get:321 http://172.17.0.1/private bullseye-staging/main armhf libavformat58 armhf 7:4.2.2-1 [945 kB]
Get:322 http://172.17.0.1/private bullseye-staging/main armhf libavformat-dev armhf 7:4.2.2-1 [1183 kB]
Get:323 http://172.17.0.1/private bullseye-staging/main armhf libboost1.67-dev armhf 1.67.0-17 [8389 kB]
Get:324 http://172.17.0.1/private bullseye-staging/main armhf libboost-dev armhf 1.67.0.2+b11 [4464 B]
Get:325 http://172.17.0.1/private bullseye-staging/main armhf libcfitsio8 armhf 3.470-3 [484 kB]
Get:326 http://172.17.0.1/private bullseye-staging/main armhf libcfitsio-dev armhf 3.470-3 [548 kB]
Get:327 http://172.17.0.1/private bullseye-staging/main armhf libcharls2 armhf 2.0.0+dfsg-1 [52.0 kB]
Get:328 http://172.17.0.1/private bullseye-staging/main armhf libcharls-dev armhf 2.0.0+dfsg-1 [8016 B]
Get:329 http://172.17.0.1/private bullseye-staging/main armhf libllvm8 armhf 1:8.0.1-7+rpi1 [12.1 MB]
Get:330 http://172.17.0.1/private bullseye-staging/main armhf libclang1-8 armhf 1:8.0.1-7+rpi1 [5258 kB]
Get:331 http://172.17.0.1/private bullseye-staging/main armhf libcurl4-gnutls-dev armhf 7.67.0-2 [357 kB]
Get:332 http://172.17.0.1/private bullseye-staging/main armhf libdap25 armhf 3.20.4-1 [469 kB]
Get:333 http://172.17.0.1/private bullseye-staging/main armhf libdapserver7v5 armhf 3.20.4-1 [129 kB]
Get:334 http://172.17.0.1/private bullseye-staging/main armhf libdapclient6v5 armhf 3.20.4-1 [187 kB]
Get:335 http://172.17.0.1/private bullseye-staging/main armhf libicu-dev armhf 63.2-2 [8846 kB]
Get:336 http://172.17.0.1/private bullseye-staging/main armhf libxml2-dev armhf 2.9.4+dfsg1-8 [660 kB]
Get:337 http://172.17.0.1/private bullseye-staging/main armhf uuid-dev armhf 2.34-0.1 [92.5 kB]
Get:338 http://172.17.0.1/private bullseye-staging/main armhf pkg-config armhf 0.29-6 [59.8 kB]
Get:339 http://172.17.0.1/private bullseye-staging/main armhf libdap-dev armhf 3.20.4-1 [769 kB]
Get:340 http://172.17.0.1/private bullseye-staging/main armhf libeigen3-dev all 3.3.7-1 [850 kB]
Get:341 http://172.17.0.1/private bullseye-staging/main armhf libpopt0 armhf 1.16-14 [46.8 kB]
Get:342 http://172.17.0.1/private bullseye-staging/main armhf libepsilon1 armhf 0.9.2+dfsg-4 [36.4 kB]
Get:343 http://172.17.0.1/private bullseye-staging/main armhf libepsilon-dev armhf 0.9.2+dfsg-4 [46.0 kB]
Get:344 http://172.17.0.1/private bullseye-staging/main armhf libevent-core-2.1-7 armhf 2.1.11-stable-1 [124 kB]
Get:345 http://172.17.0.1/private bullseye-staging/main armhf libevent-extra-2.1-7 armhf 2.1.11-stable-1 [98.7 kB]
Get:346 http://172.17.0.1/private bullseye-staging/main armhf libevent-pthreads-2.1-7 armhf 2.1.11-stable-1 [54.7 kB]
Get:347 http://172.17.0.1/private bullseye-staging/main armhf libevent-openssl-2.1-7 armhf 2.1.11-stable-1 [59.7 kB]
Get:348 http://172.17.0.1/private bullseye-staging/main armhf libevent-dev armhf 2.1.11-stable-1 [279 kB]
Get:349 http://172.17.0.1/private bullseye-staging/main armhf libexpat1-dev armhf 2.2.9-1 [119 kB]
Get:350 http://172.17.0.1/private bullseye-staging/main armhf libfftw3-double3 armhf 3.3.8-2 [429 kB]
Get:351 http://172.17.0.1/private bullseye-staging/main armhf libfftw3-single3 armhf 3.3.8-2 [633 kB]
Get:352 http://172.17.0.1/private bullseye-staging/main armhf libfftw3-bin armhf 3.3.8-2 [43.6 kB]
Get:353 http://172.17.0.1/private bullseye-staging/main armhf libfftw3-dev armhf 3.3.8-2 [1060 kB]
Get:354 http://172.17.0.1/private bullseye-staging/main armhf libpng-dev armhf 1.6.37-1 [275 kB]
Get:355 http://172.17.0.1/private bullseye-staging/main armhf libfreetype-dev armhf 2.10.1-2 [482 kB]
Get:356 http://172.17.0.1/private bullseye-staging/main armhf libfreetype6-dev armhf 2.10.1-2 [63.8 kB]
Get:357 http://172.17.0.1/private bullseye-staging/main armhf libfontconfig1-dev armhf 2.13.1-2 [943 kB]
Get:358 http://172.17.0.1/private bullseye-staging/main armhf libfreexl1 armhf 1.0.5-3 [31.8 kB]
Get:359 http://172.17.0.1/private bullseye-staging/main armhf libfreexl-dev armhf 1.0.5-3 [30.3 kB]
Get:360 http://172.17.0.1/private bullseye-staging/main armhf libfyba0 armhf 4.1.1-6 [97.8 kB]
Get:361 http://172.17.0.1/private bullseye-staging/main armhf libfyba-dev armhf 4.1.1-6 [161 kB]
Get:362 http://172.17.0.1/private bullseye-staging/main armhf libgeos-3.8.0 armhf 3.8.0-1 [725 kB]
Get:363 http://172.17.0.1/private bullseye-staging/main armhf libgeos-c1v5 armhf 3.8.0-1 [339 kB]
Get:364 http://172.17.0.1/private bullseye-staging/main armhf proj-data all 6.3.0-1 [7602 kB]
Get:365 http://172.17.0.1/private bullseye-staging/main armhf libproj15 armhf 6.3.0-1 [786 kB]
Get:366 http://172.17.0.1/private bullseye-staging/main armhf libgeotiff5 armhf 1.5.1-2 [62.7 kB]
Get:367 http://172.17.0.1/private bullseye-staging/main armhf libgif7 armhf 5.1.9-1 [42.5 kB]
Get:368 http://172.17.0.1/private bullseye-staging/main armhf libhdf4-0-alt armhf 4.2.14-1+b6 [237 kB]
Get:369 http://172.17.0.1/private bullseye-staging/main armhf libjson-c4 armhf 0.13.1+dfsg-6 [33.2 kB]
Get:370 http://172.17.0.1/private bullseye-staging/main armhf libminizip1 armhf 1.1-8+b1 [18.3 kB]
Get:371 http://172.17.0.1/private bullseye-staging/main armhf liburiparser1 armhf 0.9.3-2 [39.2 kB]
Get:372 http://172.17.0.1/private bullseye-staging/main armhf libkmlbase1 armhf 1.3.0-8 [41.6 kB]
Get:373 http://172.17.0.1/private bullseye-staging/main armhf libkmldom1 armhf 1.3.0-8 [150 kB]
Get:374 http://172.17.0.1/private bullseye-staging/main armhf libkmlengine1 armhf 1.3.0-8 [66.1 kB]
Get:375 http://172.17.0.1/private bullseye-staging/main armhf libnetcdf15 armhf 1:4.7.3-1 [341 kB]
Get:376 http://172.17.0.1/private bullseye-staging/main armhf libltdl7 armhf 2.4.6-11 [387 kB]
Get:377 http://172.17.0.1/private bullseye-staging/main armhf libodbc1 armhf 2.3.6-0.1+b1 [187 kB]
Get:378 http://172.17.0.1/private bullseye-staging/main armhf libogdi4.1 armhf 4.1.0+ds-1 [170 kB]
Get:379 http://172.17.0.1/private bullseye-staging/main armhf liblcms2-2 armhf 2.9-3 [116 kB]
Get:380 http://172.17.0.1/private bullseye-staging/main armhf libnspr4 armhf 2:4.24-1 [90.2 kB]
Get:381 http://172.17.0.1/private bullseye-staging/main armhf libnss3 armhf 2:3.49.1-1 [979 kB]
Get:382 http://172.17.0.1/private bullseye-staging/main armhf libpoppler82 armhf 0.71.0-6 [1370 kB]
Get:383 http://172.17.0.1/private bullseye-staging/main armhf libpq5 armhf 12.1-2 [155 kB]
Get:384 http://172.17.0.1/private bullseye-staging/main armhf libqhull7 armhf 2015.2-4 [175 kB]
Get:385 http://172.17.0.1/private bullseye-staging/main armhf libspatialite7 armhf 4.3.0a-6+b2 [1231 kB]
Get:386 http://172.17.0.1/private bullseye-staging/main armhf libxerces-c3.2 armhf 3.2.2+debian-1+b1 [707 kB]
Get:387 http://172.17.0.1/private bullseye-staging/main armhf odbcinst armhf 2.3.6-0.1+b1 [47.7 kB]
Get:388 http://172.17.0.1/private bullseye-staging/main armhf odbcinst1debian2 armhf 2.3.6-0.1+b1 [70.8 kB]
Get:389 http://172.17.0.1/private bullseye-staging/main armhf libgdal26 armhf 3.0.3+dfsg-1+b1 [5312 kB]
Get:390 http://172.17.0.1/private bullseye-staging/main armhf libgeos-dev armhf 3.8.0-1 [361 kB]
Get:391 http://172.17.0.1/private bullseye-staging/main armhf libsqlite3-dev armhf 3.31.0+really3.30.1+fossil191229-1 [705 kB]
Get:392 http://172.17.0.1/private bullseye-staging/main armhf libproj-dev armhf 6.3.0-1 [970 kB]
Get:393 http://172.17.0.1/private bullseye-staging/main armhf libjbig-dev armhf 2.1-3.1+b2 [27.7 kB]
Get:394 http://172.17.0.1/private bullseye-staging/main armhf liblzma-dev armhf 5.2.4-1 [203 kB]
Get:395 http://172.17.0.1/private bullseye-staging/main armhf libtiffxx5 armhf 4.1.0+git191117-2 [117 kB]
Get:396 http://172.17.0.1/private bullseye-staging/main armhf libtiff-dev armhf 4.1.0+git191117-2 [362 kB]
Get:397 http://172.17.0.1/private bullseye-staging/main armhf libgeotiff-dev armhf 1.5.1-2 [89.5 kB]
Get:398 http://172.17.0.1/private bullseye-staging/main armhf libgif-dev armhf 5.1.9-1 [45.5 kB]
Get:399 http://172.17.0.1/private bullseye-staging/main armhf libnetcdf-dev armhf 1:4.7.3-1 [92.1 kB]
Get:400 http://172.17.0.1/private bullseye-staging/main armhf libhdf4-alt-dev armhf 4.2.14-1+b6 [313 kB]
Get:401 http://172.17.0.1/private bullseye-staging/main armhf libjson-c-dev armhf 0.13.1+dfsg-6 [52.0 kB]
Get:402 http://172.17.0.1/private bullseye-staging/main armhf libkmlconvenience1 armhf 1.3.0-8 [44.0 kB]
Get:403 http://172.17.0.1/private bullseye-staging/main armhf libkmlregionator1 armhf 1.3.0-8 [22.6 kB]
Get:404 http://172.17.0.1/private bullseye-staging/main armhf libkmlxsd1 armhf 1.3.0-8 [30.4 kB]
Get:405 http://172.17.0.1/private bullseye-staging/main armhf libminizip-dev armhf 1.1-8+b1 [25.8 kB]
Get:406 http://172.17.0.1/private bullseye-staging/main armhf liburiparser-dev armhf 0.9.3-2 [22.0 kB]
Get:407 http://172.17.0.1/private bullseye-staging/main armhf libkml-dev armhf 1.3.0-8 [940 kB]
Get:408 http://172.17.0.1/private bullseye-staging/main armhf libltdl-dev armhf 2.4.6-11 [159 kB]
Get:409 http://172.17.0.1/private bullseye-staging/main armhf libogdi-dev armhf 4.1.0+ds-1 [37.1 kB]
Get:410 http://172.17.0.1/private bullseye-staging/main armhf libopenjp2-7-dev armhf 2.3.1-1 [46.7 kB]
Get:411 http://172.17.0.1/private bullseye-staging/main armhf libpcre16-3 armhf 2:8.39-12 [234 kB]
Get:412 http://172.17.0.1/private bullseye-staging/main armhf libpcre32-3 armhf 2:8.39-12 [227 kB]
Get:413 http://172.17.0.1/private bullseye-staging/main armhf libpcrecpp0v5 armhf 2:8.39-12 [150 kB]
Get:414 http://172.17.0.1/private bullseye-staging/main armhf libpcre3-dev armhf 2:8.39-12 [564 kB]
Get:415 http://172.17.0.1/private bullseye-staging/main armhf libpoppler-dev armhf 0.71.0-6 [23.9 kB]
Get:416 http://172.17.0.1/private bullseye-staging/main armhf libpoppler-private-dev armhf 0.71.0-6 [188 kB]
Get:417 http://172.17.0.1/private bullseye-staging/main armhf libpq-dev armhf 12.1-2 [125 kB]
Get:418 http://172.17.0.1/private bullseye-staging/main armhf libqhull-r7 armhf 2015.2-4 [171 kB]
Get:419 http://172.17.0.1/private bullseye-staging/main armhf libqhull-dev armhf 2015.2-4 [346 kB]
Get:420 http://172.17.0.1/private bullseye-staging/main armhf libspatialite-dev armhf 4.3.0a-6+b2 [1455 kB]
Get:421 http://172.17.0.1/private bullseye-staging/main armhf libwebpdemux2 armhf 0.6.1-2 [86.7 kB]
Get:422 http://172.17.0.1/private bullseye-staging/main armhf libwebp-dev armhf 0.6.1-2 [304 kB]
Get:423 http://172.17.0.1/private bullseye-staging/main armhf libxerces-c-dev armhf 3.2.2+debian-1+b1 [1466 kB]
Get:424 http://172.17.0.1/private bullseye-staging/main armhf libzstd-dev armhf 1.4.4+dfsg-1+rpi1 [259 kB]
Get:425 http://172.17.0.1/private bullseye-staging/main armhf unixodbc-dev armhf 2.3.6-0.1+b1 [232 kB]
Get:426 http://172.17.0.1/private bullseye-staging/main armhf libgdal-dev armhf 3.0.3+dfsg-1+b1 [6915 kB]
Get:427 http://172.17.0.1/private bullseye-staging/main armhf libgl1-mesa-dev armhf 19.3.2-1 [49.1 kB]
Get:428 http://172.17.0.1/private bullseye-staging/main armhf libgl2ps1.4 armhf 1.4.0+dfsg1-2 [34.2 kB]
Get:429 http://172.17.0.1/private bullseye-staging/main armhf libgl2ps-dev armhf 1.4.0+dfsg1-2 [14.8 kB]
Get:430 http://172.17.0.1/private bullseye-staging/main armhf libglew2.1 armhf 2.1.0-4 [160 kB]
Get:431 http://172.17.0.1/private bullseye-staging/main armhf libglu1-mesa armhf 9.0.1-1 [127 kB]
Get:432 http://172.17.0.1/private bullseye-staging/main armhf libglu1-mesa-dev armhf 9.0.1-1 [166 kB]
Get:433 http://172.17.0.1/private bullseye-staging/main armhf libglew-dev armhf 2.1.0-4 [141 kB]
Get:434 http://172.17.0.1/private bullseye-staging/main armhf libhwloc15 armhf 2.1.0+dfsg-3+rpi1 [112 kB]
Get:435 http://172.17.0.1/private bullseye-staging/main armhf libpciaccess0 armhf 0.14-1 [51.0 kB]
Get:436 http://172.17.0.1/private bullseye-staging/main armhf libxnvctrl0 armhf 435.21-1 [24.9 kB]
Get:437 http://172.17.0.1/private bullseye-staging/main armhf libhwloc-plugins armhf 2.1.0+dfsg-3+rpi1 [18.6 kB]
Get:438 http://172.17.0.1/private bullseye-staging/main armhf libpmix2 armhf 3.1.4-1+b1 [370 kB]
Get:439 http://172.17.0.1/private bullseye-staging/main armhf libopenmpi3 armhf 4.0.2-5+rpi1 [1679 kB]
Get:440 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-openmpi-103 armhf 1.10.4+repack-10 [1306 kB]
Get:441 http://172.17.0.1/private bullseye-staging/main armhf openmpi-common all 4.0.2-5+rpi1 [168 kB]
Get:442 http://172.17.0.1/private bullseye-staging/main armhf libnl-3-dev armhf 3.4.0-1 [92.4 kB]
Get:443 http://172.17.0.1/private bullseye-staging/main armhf libnl-route-3-dev armhf 3.4.0-1 [145 kB]
Get:444 http://172.17.0.1/private bullseye-staging/main armhf libibverbs-dev armhf 27.0-2 [166 kB]
Get:445 http://172.17.0.1/private bullseye-staging/main armhf libhwloc-dev armhf 2.1.0+dfsg-3+rpi1 [173 kB]
Get:446 http://172.17.0.1/private bullseye-staging/main armhf openmpi-bin armhf 4.0.2-5+rpi1 [185 kB]
Get:447 http://172.17.0.1/private bullseye-staging/main armhf libopenmpi-dev armhf 4.0.2-5+rpi1 [905 kB]
Get:448 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-openmpi-dev armhf 1.10.4+repack-10 [2181 kB]
Get:449 http://172.17.0.1/private bullseye-staging/main armhf mpi-default-dev armhf 1.13 [5476 B]
Get:450 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-mpi-dev armhf 1.10.4+repack-10 [27.3 kB]
Get:451 http://172.17.0.1/private bullseye-staging/main armhf libice-dev armhf 2:1.0.9-2 [58.8 kB]
Get:452 http://172.17.0.1/private bullseye-staging/main armhf libjs-jquery all 3.3.1~dfsg-3 [332 kB]
Get:453 http://172.17.0.1/private bullseye-staging/main armhf libjs-underscore all 1.9.1~dfsg-1 [99.4 kB]
Get:454 http://172.17.0.1/private bullseye-staging/main armhf libjs-sphinxdoc all 1.8.5-5 [96.7 kB]
Get:455 http://172.17.0.1/private bullseye-staging/main armhf libkim-api2 armhf 2.1.3-5 [156 kB]
Get:456 http://172.17.0.1/private bullseye-staging/main armhf libkim-api-dev armhf 2.1.3-5 [289 kB]
Get:457 http://172.17.0.1/private bullseye-staging/main armhf libnetcdf-c++4 armhf 4.2-11+b1 [29.1 kB]
Get:458 http://172.17.0.1/private bullseye-staging/main armhf libnetcdf-cxx-legacy-dev armhf 4.2-11+b1 [52.0 kB]
Get:459 http://172.17.0.1/private bullseye-staging/main armhf libogg-dev armhf 1.3.2-1+b2 [194 kB]
Get:460 http://172.17.0.1/private bullseye-staging/main armhf libpython3.7 armhf 3.7.6-1+b1 [1256 kB]
Get:461 http://172.17.0.1/private bullseye-staging/main armhf libpython3.7-dev armhf 3.7.6-1+b1 [40.2 MB]
Get:462 http://172.17.0.1/private bullseye-staging/main armhf libpython3-dev armhf 3.7.5-3 [20.3 kB]
Get:463 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8-stdlib armhf 3.8.1-2+b1 [1598 kB]
Get:464 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8 armhf 3.8.1-2+b1 [1360 kB]
Get:465 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8-dev armhf 3.8.1-2+b1 [46.0 MB]
Get:466 http://172.17.0.1/private bullseye-staging/main armhf libpython3-all-dev armhf 3.7.5-3 [1072 B]
Get:467 http://172.17.0.1/private bullseye-staging/main armhf libqt5designer5 armhf 5.12.5-2 [2651 kB]
Get:468 http://172.17.0.1/private bullseye-staging/main armhf libqt5designercomponents5 armhf 5.12.5-2 [620 kB]
Get:469 http://172.17.0.1/private bullseye-staging/main armhf libqt5help5 armhf 5.12.5-2 [118 kB]
Get:470 http://172.17.0.1/private bullseye-staging/main armhf libqt5opengl5 armhf 5.12.5+dfsg-7+rpi1 [145 kB]
Get:471 http://172.17.0.1/private bullseye-staging/main armhf libqt5opengl5-dev armhf 5.12.5+dfsg-7+rpi1 [70.7 kB]
Get:472 http://172.17.0.1/private bullseye-staging/main armhf libqt5sql5-sqlite armhf 5.12.5+dfsg-7+rpi1 [74.1 kB]
Get:473 http://172.17.0.1/private bullseye-staging/main armhf libqt5x11extras5 armhf 5.12.5-1 [11.4 kB]
Get:474 http://172.17.0.1/private bullseye-staging/main armhf libsm-dev armhf 2:1.2.3-1 [35.4 kB]
Get:475 http://172.17.0.1/private bullseye-staging/main armhf libsodium23 armhf 1.0.18-1 [143 kB]
Get:476 http://172.17.0.1/private bullseye-staging/main armhf libswscale5 armhf 7:4.2.2-1 [170 kB]
Get:477 http://172.17.0.1/private bullseye-staging/main armhf libswscale-dev armhf 7:4.2.2-1 [184 kB]
Get:478 http://172.17.0.1/private bullseye-staging/main armhf libsymspg1 armhf 1.14.1-5 [77.3 kB]
Get:479 http://172.17.0.1/private bullseye-staging/main armhf libsymspg-dev armhf 1.14.1-5 [86.0 kB]
Get:480 http://172.17.0.1/private bullseye-staging/main armhf libtcl8.6 armhf 8.6.10+dfsg-1 [886 kB]
Get:481 http://172.17.0.1/private bullseye-staging/main armhf libtheora-dev armhf 1.1.1+dfsg.1-15 [164 kB]
Get:482 http://172.17.0.1/private bullseye-staging/main armhf libxft2 armhf 2.3.2-2 [49.3 kB]
Get:483 http://172.17.0.1/private bullseye-staging/main armhf libxss1 armhf 1:1.2.3-1 [17.3 kB]
Get:484 http://172.17.0.1/private bullseye-staging/main armhf libtk8.6 armhf 8.6.10-1 [678 kB]
Get:485 http://172.17.0.1/private bullseye-staging/main armhf libvoro++1 armhf 0.4.6+dfsg1-3 [91.4 kB]
Get:486 http://172.17.0.1/private bullseye-staging/main armhf libjsoncpp-dev armhf 1.7.4-3.1 [81.0 kB]
Get:487 http://172.17.0.1/private bullseye-staging/main armhf libxt6 armhf 1:1.1.5-1+b3 [156 kB]
Get:488 http://172.17.0.1/private bullseye-staging/main armhf libvtk7.1p armhf 7.1.1+dfsg2-1+b2 [31.4 MB]
Get:489 http://172.17.0.1/private bullseye-staging/main armhf libvtk7-jni armhf 7.1.1+dfsg2-1+b2 [4182 kB]
Get:490 http://172.17.0.1/private bullseye-staging/main armhf libvtk7-java armhf 7.1.1+dfsg2-1+b2 [2196 kB]
Get:491 http://172.17.0.1/private bullseye-staging/main armhf libxrender-dev armhf 1:0.9.10-1 [37.7 kB]
Get:492 http://172.17.0.1/private bullseye-staging/main armhf libxft-dev armhf 2.3.2-2 [60.3 kB]
Get:493 http://172.17.0.1/private bullseye-staging/main armhf x11proto-scrnsaver-dev all 2018.4-4 [3136 B]
Get:494 http://172.17.0.1/private bullseye-staging/main armhf libxss-dev armhf 1:1.2.3-1 [23.0 kB]
Get:495 http://172.17.0.1/private bullseye-staging/main armhf libxt-dev armhf 1:1.1.5-1+b3 [390 kB]
Get:496 http://172.17.0.1/private bullseye-staging/main armhf python3-cbor armhf 1.0.0-1.1 [19.2 kB]
Get:497 http://172.17.0.1/private bullseye-staging/main armhf python3-lz4 armhf 3.0.2+dfsg-1 [30.6 kB]
Get:498 http://172.17.0.1/private bullseye-staging/main armhf python3-cffi-backend armhf 1.13.2-1+b2 [88.2 kB]
Get:499 http://172.17.0.1/private bullseye-staging/main armhf python3-six all 1.14.0-2 [16.7 kB]
Get:500 http://172.17.0.1/private bullseye-staging/main armhf python3-nacl armhf 1.3.0-4 [44.0 kB]
Get:501 http://172.17.0.1/private bullseye-staging/main armhf python3-asn1crypto all 0.24.0-1 [78.2 kB]
Get:502 http://172.17.0.1/private bullseye-staging/main armhf python3-cryptography armhf 2.6.1-4 [187 kB]
Get:503 http://172.17.0.1/private bullseye-staging/main armhf python3-openssl all 19.0.0-1 [52.1 kB]
Get:504 http://172.17.0.1/private bullseye-staging/main armhf python3-pyqrcode all 1.2.1-4 [30.3 kB]
Get:505 http://172.17.0.1/private bullseye-staging/main armhf python3-attr all 18.2.0-1 [37.3 kB]
Get:506 http://172.17.0.1/private bullseye-staging/main armhf python3-pyasn1 all 0.4.2-3 [57.7 kB]
Get:507 http://172.17.0.1/private bullseye-staging/main armhf python3-pyasn1-modules all 0.2.1-0.2 [34.5 kB]
Get:508 http://172.17.0.1/private bullseye-staging/main armhf python3-service-identity all 18.1.0-5 [12.5 kB]
Get:509 http://172.17.0.1/private bullseye-staging/main armhf python3-snappy armhf 0.5.3-1.1 [16.3 kB]
Get:510 http://172.17.0.1/private bullseye-staging/main armhf python3-trie all 0.2+ds-2 [7476 B]
Get:511 http://172.17.0.1/private bullseye-staging/main armhf python3-automat all 0.6.0-1 [25.1 kB]
Get:512 http://172.17.0.1/private bullseye-staging/main armhf python3-constantly all 15.1.0-1 [7982 B]
Get:513 http://172.17.0.1/private bullseye-staging/main armhf python3-idna all 2.6-2 [34.4 kB]
Get:514 http://172.17.0.1/private bullseye-staging/main armhf python3-hyperlink all 19.0.0-1 [35.9 kB]
Get:515 http://172.17.0.1/private bullseye-staging/main armhf python3-incremental all 16.10.1-3.1 [14.8 kB]
Get:516 http://172.17.0.1/private bullseye-staging/main armhf python3-pkg-resources all 44.0.0-1 [155 kB]
Get:517 http://172.17.0.1/private bullseye-staging/main armhf python3-zope.interface armhf 4.6.0-4 [94.1 kB]
Get:518 http://172.17.0.1/private bullseye-staging/main armhf python3-twisted-bin armhf 18.9.0-3 [18.7 kB]
Get:519 http://172.17.0.1/private bullseye-staging/main armhf python3-twisted all 18.9.0-3 [1934 kB]
Get:520 http://172.17.0.1/private bullseye-staging/main armhf python3-txaio all 2.10.0-2 [18.8 kB]
Get:521 http://172.17.0.1/private bullseye-staging/main armhf python3-u-msgpack all 2.1-1 [7310 B]
Get:522 http://172.17.0.1/private bullseye-staging/main armhf python3-ubjson armhf 0.14.0-2 [31.8 kB]
Get:523 http://172.17.0.1/private bullseye-staging/main armhf python3-wsaccel armhf 0.6.2-2+rpi1 [34.3 kB]
Get:524 http://172.17.0.1/private bullseye-staging/main armhf python3-autobahn all 17.10.1+dfsg1-6+rvt [164 kB]
Get:525 http://172.17.0.1/private bullseye-staging/main armhf mpi-default-bin armhf 1.13 [4672 B]
Get:526 http://172.17.0.1/private bullseye-staging/main armhf python3-mpi4py armhf 3.0.3-4 [697 kB]
Get:527 http://172.17.0.1/private bullseye-staging/main armhf python3-vtk7 armhf 7.1.1+dfsg2-1+b2 [230 kB]
Get:528 http://172.17.0.1/private bullseye-staging/main armhf tcl8.6 armhf 8.6.10+dfsg-1 [123 kB]
Get:529 http://172.17.0.1/private bullseye-staging/main armhf tcl8.6-dev armhf 8.6.10+dfsg-1 [917 kB]
Get:530 http://172.17.0.1/private bullseye-staging/main armhf tcl armhf 8.6.9+1 [5636 B]
Get:531 http://172.17.0.1/private bullseye-staging/main armhf tcl-dev armhf 8.6.9+1 [8192 B]
Get:532 http://172.17.0.1/private bullseye-staging/main armhf tcl-vtk7 armhf 7.1.1+dfsg2-1+b2 [130 kB]
Get:533 http://172.17.0.1/private bullseye-staging/main armhf tk8.6 armhf 8.6.10-1 [71.9 kB]
Get:534 http://172.17.0.1/private bullseye-staging/main armhf tk8.6-dev armhf 8.6.10-1 [700 kB]
Get:535 http://172.17.0.1/private bullseye-staging/main armhf tk armhf 8.6.9+1 [5676 B]
Get:536 http://172.17.0.1/private bullseye-staging/main armhf tk-dev armhf 8.6.9+1 [5500 B]
Get:537 http://172.17.0.1/private bullseye-staging/main armhf vtk7 armhf 7.1.1+dfsg2-1+b2 [135 kB]
Get:538 http://172.17.0.1/private bullseye-staging/main armhf libvtk7-dev armhf 7.1.1+dfsg2-1+b2 [2243 kB]
Get:539 http://172.17.0.1/private bullseye-staging/main armhf libvtk7.1p-qt armhf 7.1.1+dfsg2-1+b2 [87.7 kB]
Get:540 http://172.17.0.1/private bullseye-staging/main armhf qdoc-qt5 armhf 5.12.5-2 [435 kB]
Get:541 http://172.17.0.1/private bullseye-staging/main armhf qhelpgenerator-qt5 armhf 5.12.5-2 [63.4 kB]
Get:542 http://172.17.0.1/private bullseye-staging/main armhf qt5-assistant armhf 5.12.5-2 [354 kB]
Get:543 http://172.17.0.1/private bullseye-staging/main armhf qtattributionsscanner-qt5 armhf 5.12.5-2 [31.1 kB]
Get:544 http://172.17.0.1/private bullseye-staging/main armhf qttools5-dev-tools armhf 5.12.5-2 [914 kB]
Get:545 http://172.17.0.1/private bullseye-staging/main armhf qttools5-dev armhf 5.12.5-2 [177 kB]
Get:546 http://172.17.0.1/private bullseye-staging/main armhf qttools5-private-dev armhf 5.12.5-2 [77.6 kB]
Get:547 http://172.17.0.1/private bullseye-staging/main armhf libvtk7-qt-dev armhf 7.1.1+dfsg2-1+b2 [22.7 kB]
Get:548 http://172.17.0.1/private bullseye-staging/main armhf opencl-c-headers all 2.2~2019.08.06-g0d5f18c-1 [31.4 kB]
Get:549 http://172.17.0.1/private bullseye-staging/main armhf ocl-icd-opencl-dev armhf 2.2.12-2 [10.7 kB]
Get:550 http://172.17.0.1/private bullseye-staging/main armhf python-babel-localedata all 2.6.0+dfsg.1-1 [4083 kB]
Get:551 http://172.17.0.1/private bullseye-staging/main armhf python3.8 armhf 3.8.1-2+b1 [406 kB]
Get:552 http://172.17.0.1/private bullseye-staging/main armhf python3-all armhf 3.7.5-3 [1060 B]
Get:553 http://172.17.0.1/private bullseye-staging/main armhf python3.7-dev armhf 3.7.6-1+b1 [518 kB]
Get:554 http://172.17.0.1/private bullseye-staging/main armhf python3-dev armhf 3.7.5-3 [1260 B]
Get:555 http://172.17.0.1/private bullseye-staging/main armhf python3.8-dev armhf 3.8.1-2+b1 [519 kB]
Get:556 http://172.17.0.1/private bullseye-staging/main armhf python3-all-dev armhf 3.7.5-3 [1076 B]
Get:557 http://172.17.0.1/private bullseye-staging/main armhf python3-tz all 2019.3-1 [27.2 kB]
Get:558 http://172.17.0.1/private bullseye-staging/main armhf python3-babel all 2.6.0+dfsg.1-1 [96.7 kB]
Get:559 http://172.17.0.1/private bullseye-staging/main armhf python3-certifi all 2019.11.28-1 [149 kB]
Get:560 http://172.17.0.1/private bullseye-staging/main armhf python3-chardet all 3.0.4-4 [80.8 kB]
Get:561 http://172.17.0.1/private bullseye-staging/main armhf python3-roman all 2.0.0-3 [8768 B]
Get:562 http://172.17.0.1/private bullseye-staging/main armhf python3-docutils all 0.16+dfsg-1 [383 kB]
Get:563 http://172.17.0.1/private bullseye-staging/main armhf python3-imagesize all 1.2.0-1 [5764 B]
Get:564 http://172.17.0.1/private bullseye-staging/main armhf python3-markupsafe armhf 1.1.0-1+b1 [15.1 kB]
Get:565 http://172.17.0.1/private bullseye-staging/main armhf python3-jinja2 all 2.10.1-1 [107 kB]
Get:566 http://172.17.0.1/private bullseye-staging/main armhf python3-pyparsing all 2.4.2-1 [106 kB]
Get:567 http://172.17.0.1/private bullseye-staging/main armhf python3-packaging all 19.1-2 [23.9 kB]
Get:568 http://172.17.0.1/private bullseye-staging/main armhf python3-pygments all 2.3.1+dfsg-1 [594 kB]
Get:569 http://172.17.0.1/private bullseye-staging/main armhf python3-urllib3 all 1.25.6-5 [104 kB]
Get:570 http://172.17.0.1/private bullseye-staging/main armhf python3-requests all 2.22.0-2 [67.0 kB]
Get:571 http://172.17.0.1/private bullseye-staging/main armhf sphinx-common all 1.8.5-5 [491 kB]
Get:572 http://172.17.0.1/private bullseye-staging/main armhf python3-alabaster all 0.7.8-1 [18.4 kB]
Get:573 http://172.17.0.1/private bullseye-staging/main armhf python3-sphinx all 1.8.5-5 [482 kB]
Get:574 http://172.17.0.1/private bullseye-staging/main armhf voro++-dev armhf 0.4.6+dfsg1-3 [126 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 407 MB in 2min 16s (2994 kB/s)
Selecting previously unselected package libbsd0:armhf.
(Reading database ... 14074 files and directories currently installed.)
Preparing to unpack .../000-libbsd0_0.10.0-1_armhf.deb ...
Unpacking libbsd0:armhf (0.10.0-1) ...
Selecting previously unselected package libtinfo5:armhf.
Preparing to unpack .../001-libtinfo5_6.1+20191019-1_armhf.deb ...
Unpacking libtinfo5:armhf (6.1+20191019-1) ...
Selecting previously unselected package bsdmainutils.
Preparing to unpack .../002-bsdmainutils_11.1.2_armhf.deb ...
Unpacking bsdmainutils (11.1.2) ...
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Preparing to unpack .../003-libuchardet0_0.0.6-3_armhf.deb ...
Unpacking libuchardet0:armhf (0.0.6-3) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../004-groff-base_1.22.4-4_armhf.deb ...
Unpacking groff-base (1.22.4-4) ...
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Preparing to unpack .../005-libpipeline1_1.5.2-2_armhf.deb ...
Unpacking libpipeline1:armhf (1.5.2-2) ...
Selecting previously unselected package man-db.
Preparing to unpack .../006-man-db_2.9.0-2_armhf.deb ...
Unpacking man-db (2.9.0-2) ...
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Preparing to unpack .../007-libglvnd0_1.3.0-7_armhf.deb ...
Unpacking libglvnd0:armhf (1.3.0-7) ...
Selecting previously unselected package libdrm-common.
Preparing to unpack .../008-libdrm-common_2.4.100-4+rpi1_all.deb ...
Unpacking libdrm-common (2.4.100-4+rpi1) ...
Selecting previously unselected package libdrm2:armhf.
Preparing to unpack .../009-libdrm2_2.4.100-4+rpi1_armhf.deb ...
Unpacking libdrm2:armhf (2.4.100-4+rpi1) ...
Selecting previously unselected package libexpat1:armhf.
Preparing to unpack .../010-libexpat1_2.2.9-1_armhf.deb ...
Unpacking libexpat1:armhf (2.2.9-1) ...
Selecting previously unselected package libwayland-server0:armhf.
Preparing to unpack .../011-libwayland-server0_1.17.0-1+b1_armhf.deb ...
Unpacking libwayland-server0:armhf (1.17.0-1+b1) ...
Selecting previously unselected package libgbm1:armhf.
Preparing to unpack .../012-libgbm1_19.3.2-1_armhf.deb ...
Unpacking libgbm1:armhf (19.3.2-1) ...
Selecting previously unselected package libglapi-mesa:armhf.
Preparing to unpack .../013-libglapi-mesa_19.3.2-1_armhf.deb ...
Unpacking libglapi-mesa:armhf (19.3.2-1) ...
Selecting previously unselected package libwayland-client0:armhf.
Preparing to unpack .../014-libwayland-client0_1.17.0-1+b1_armhf.deb ...
Unpacking libwayland-client0:armhf (1.17.0-1+b1) ...
Selecting previously unselected package libx11-xcb1:armhf.
Preparing to unpack .../015-libx11-xcb1_2%3a1.6.8-1_armhf.deb ...
Unpacking libx11-xcb1:armhf (2:1.6.8-1) ...
Selecting previously unselected package libxau6:armhf.
Preparing to unpack .../016-libxau6_1%3a1.0.8-1+b2_armhf.deb ...
Unpacking libxau6:armhf (1:1.0.8-1+b2) ...
Selecting previously unselected package libxdmcp6:armhf.
Preparing to unpack .../017-libxdmcp6_1%3a1.1.2-3_armhf.deb ...
Unpacking libxdmcp6:armhf (1:1.1.2-3) ...
Selecting previously unselected package libxcb1:armhf.
Preparing to unpack .../018-libxcb1_1.13.1-2_armhf.deb ...
Unpacking libxcb1:armhf (1.13.1-2) ...
Selecting previously unselected package libxcb-dri2-0:armhf.
Preparing to unpack .../019-libxcb-dri2-0_1.13.1-2_armhf.deb ...
Unpacking libxcb-dri2-0:armhf (1.13.1-2) ...
Selecting previously unselected package libxcb-dri3-0:armhf.
Preparing to unpack .../020-libxcb-dri3-0_1.13.1-2_armhf.deb ...
Unpacking libxcb-dri3-0:armhf (1.13.1-2) ...
Selecting previously unselected package libxcb-present0:armhf.
Preparing to unpack .../021-libxcb-present0_1.13.1-2_armhf.deb ...
Unpacking libxcb-present0:armhf (1.13.1-2) ...
Selecting previously unselected package libxcb-sync1:armhf.
Preparing to unpack .../022-libxcb-sync1_1.13.1-2_armhf.deb ...
Unpacking libxcb-sync1:armhf (1.13.1-2) ...
Selecting previously unselected package libxcb-xfixes0:armhf.
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Unpacking libxcb-xfixes0:armhf (1.13.1-2) ...
Selecting previously unselected package libxshmfence1:armhf.
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Unpacking libxshmfence1:armhf (1.3-1) ...
Selecting previously unselected package libegl-mesa0:armhf.
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Setting up libsymspg1:armhf (1.14.1-5) ...
Setting up x11-common (1:7.7+20) ...
update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
invoke-rc.d: could not determine current runlevel
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
Setting up libsensors-config (1:3.6.0-2) ...
Setting up libnghttp2-14:armhf (1.40.0-1+b2) ...
Setting up libmagic1:armhf (1:5.38-4) ...
Setting up gettext-base (0.19.8.1-10) ...
Setting up xkb-data (2.26-2) ...
Setting up libqhull7:armhf (2015.2-4) ...
Setting up file (1:5.38-4) ...
Setting up libogg-dev:armhf (1.3.2-1+b2) ...
Setting up libxvidcore4:armhf (2:1.3.6-1) ...
Setting up libpthread-stubs0-dev:armhf (0.4-1) ...
Setting up libjbig0:armhf (2.1-3.1+b2) ...
Setting up libpcre2-16-0:armhf (10.34-7) ...
Setting up libaec0:armhf (1.0.4-1) ...
Setting up libicu63:armhf (63.2-2) ...
Setting up gdal-data (3.0.3+dfsg-1) ...
Setting up python-babel-localedata (2.6.0+dfsg.1-1) ...
Setting up libsnappy1v5:armhf (1.1.8-1) ...
Setting up libkrb5support0:armhf (1.17-6+b1) ...
Setting up mariadb-common (1:10.3.22-1) ...
update-alternatives: using /etc/mysql/mariadb.cnf to provide /etc/mysql/my.cnf (my.cnf) in auto mode
Setting up libminizip-dev:armhf (1.1-8+b1) ...
Setting up xtrans-dev (1.3.5-1) ...
Setting up autotools-dev (20180224.1) ...
Setting up libz3-4:armhf (4.8.7-4) ...
Setting up libblas3:armhf (3.9.0-1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up libgmpxx4ldbl:armhf (2:6.1.2+dfsg-4) ...
Setting up libuv1:armhf (1.33.1-2) ...
Setting up libgles2:armhf (1.3.0-7) ...
Setting up libexpat1-dev:armhf (2.2.9-1) ...
Setting up libjpeg62-turbo:armhf (1:1.5.2-2+b1) ...
Setting up qt5-qmake-bin (5.12.5+dfsg-7+rpi1) ...
Setting up libva2:armhf (2.6.1-1) ...
Setting up libsqlite3-dev:armhf (3.31.0+really3.30.1+fossil191229-1) ...
Setting up libx11-data (2:1.6.8-1) ...
Setting up libjpeg62-turbo-dev:armhf (1:1.5.2-2+b1) ...
Setting up libnspr4:armhf (2:4.24-1) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b1) ...
Setting up uuid-dev:armhf (2.34-0.1) ...
Setting up libcodec2-0.9:armhf (0.9.2-2) ...
Setting up libavahi-common-data:armhf (0.7-5) ...
Setting up libncurses6:armhf (6.1+20191019-1) ...
Setting up libgles1:armhf (1.3.0-7) ...
Setting up libdbus-1-3:armhf (1.12.16-2+b1) ...
Setting up libsigsegv2:armhf (2.12-2) ...
Setting up libfribidi0:armhf (1.0.7-1.1) ...
Setting up libopus0:armhf (1.3-1) ...
Setting up libpng16-16:armhf (1.6.37-1) ...
Setting up libpcre32-3:armhf (2:8.39-12) ...
Setting up libevent-core-2.1-7:armhf (2.1.11-stable-1) ...
Setting up libvorbis0a:armhf (1.3.6-2) ...
Setting up libevent-2.1-7:armhf (2.1.11-stable-1) ...
Setting up liborc-0.4-0:armhf (1:0.4.31-1) ...
Setting up libtcl8.6:armhf (8.6.10+dfsg-1) ...
Setting up autopoint (0.19.8.1-10) ...
Setting up libwebp6:armhf (0.6.1-2) ...
Setting up icu-devtools (63.2-2) ...
Setting up libgeos-c1v5:armhf (3.8.0-1) ...
Setting up pkg-config (0.29-6) ...
Setting up libmariadb3:armhf (1:10.3.22-1) ...
Setting up fonts-dejavu-core (2.37-1) ...
Setting up libgnutlsxx28:armhf (3.6.11.1-2) ...
Setting up libproj15:armhf (6.3.0-1) ...
Setting up libsensors5:armhf (1:3.6.0-2) ...
Setting up libk5crypto3:armhf (1.17-6+b1) ...
Setting up libqt5core5a:armhf (5.12.5+dfsg-7+rpi1) ...
Setting up libltdl7:armhf (2.4.6-11) ...
Setting up opencl-c-headers (2.2~2019.08.06-g0d5f18c-1) ...
Setting up libfftw3-double3:armhf (3.3.8-2) ...
Setting up libidn2-dev:armhf (2.2.0-2) ...
Setting up libglapi-mesa:armhf (19.3.2-1) ...
Setting up libgfortran5:armhf (9.2.1-25+rpi1) ...
Setting up libmtdev1:armhf (1.1.5-1.1) ...
Setting up libvulkan1:armhf (1.1.126.0-2) ...
Setting up libhdf4-0-alt (4.2.14-1+b6) ...
Setting up liblzma-dev:armhf (5.2.4-1) ...
Setting up libgif7:armhf (5.1.9-1) ...
Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-1) ...
Setting up liburiparser1:armhf (0.9.3-2) ...
Setting up python3.8-minimal (3.8.1-2+b1) ...
Setting up libfreexl1:armhf (1.0.5-3) ...
Setting up sensible-utils (0.0.12+nmu1) ...
Setting up ocl-icd-libopencl1:armhf (2.2.12-2) ...
Setting up libgif-dev (5.1.9-1) ...
Setting up libxshmfence1:armhf (1.3-1) ...
Setting up libvpx6:armhf (1.8.2-1) ...
Setting up libqt5dbus5:armhf (5.12.5+dfsg-7+rpi1) ...
Setting up librhash0:armhf (1.3.9-1) ...
Setting up libwavpack1:armhf (5.2.0-1) ...
Setting up libfyba0:armhf (4.1.1-6) ...
Setting up libuchardet0:armhf (0.0.6-3) ...
Setting up procps (2:3.3.15-2) ...
update-alternatives: using /usr/bin/w.procps to provide /usr/bin/w (w) in auto mode
Setting up libkmlbase1:armhf (1.3.0-8) ...
Setting up libnl-3-200:armhf (3.4.0-1) ...
Setting up openmpi-common (4.0.2-5+rpi1) ...
Setting up libopenjp2-7:armhf (2.3.1-1) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up libthai-data (0.1.28-3) ...
Setting up libssh2-1:armhf (1.8.0-2.1) ...
Setting up xorg-sgml-doctools (1:1.11-1) ...
Setting up sgml-base (1.29.1) ...
Setting up cmake-data (3.15.4-1+rpi1) ...
Setting up libkrb5-3:armhf (1.17-6+b1) ...
Setting up libboost-dev:armhf (1.67.0.2+b11) ...
Setting up libtiff5:armhf (4.1.0+git191117-2) ...
Setting up libqhull-r7:armhf (2015.2-4) ...
Setting up libmpdec2:armhf (2.4.2-2) ...
Setting up libjson-c4:armhf (0.13.1+dfsg-6) ...
Setting up libjs-jquery (3.3.1~dfsg-3) ...
Setting up libqt5sensors5:armhf (5.12.5-2) ...
Setting up libpython3.8-stdlib:armhf (3.8.1-2+b1) ...
Setting up python3.8 (3.8.1-2+b1) ...
Setting up libqt5test5:armhf (5.12.5+dfsg-7+rpi1) ...
Setting up libvoro++1 (0.4.6+dfsg1-3) ...
Setting up libtasn1-6-dev:armhf (4.15.0-2) ...
Setting up openssl (1.1.1d-2) ...
Setting up libwebpmux3:armhf (0.6.1-2) ...
Setting up libbsd0:armhf (0.10.0-1) ...
Setting up libtinfo5:armhf (6.1+20191019-1) ...
Setting up libdrm-common (2.4.100-4+rpi1) ...
Setting up libelf1:armhf (0.176-1.1) ...
Setting up libevdev2:armhf (1.8.0+dfsg-2) ...
Setting up libogdi-dev (4.1.0+ds-1) ...
Setting up libicu-dev:armhf (63.2-2) ...
Setting up libxml2:armhf (2.9.4+dfsg1-8) ...
Setting up libqt5concurrent5:armhf (5.12.5+dfsg-7+rpi1) ...
Setting up iso-codes (4.4-1) ...
Setting up libgudev-1.0-0:armhf (233-1) ...
Setting up libzvbi-common (0.2.35-16) ...
Setting up qtchooser (66-2) ...
Setting up libgstreamer1.0-0:armhf (1.16.2-2) ...
Setcap worked! gst-ptp-helper is not suid!
Setting up libp11-kit-dev:armhf (0.23.18.1-2+b1) ...
Setting up libmp3lame0:armhf (3.100-3) ...
Setting up libblas-dev:armhf (3.9.0-1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode
Setting up libsz2:armhf (1.0.4-1) ...
Setting up libvorbisenc2:armhf (1.3.6-2) ...
Setting up libjsoncpp1:armhf (1.7.4-3.1) ...
Setting up libkmlxsd1:armhf (1.3.0-8) ...
Setting up libtiffxx5:armhf (4.1.0+git191117-2) ...
Setting up libjs-underscore (1.9.1~dfsg-1) ...
Setting up libpopt0:armhf (1.16-14) ...
Setting up libevent-pthreads-2.1-7:armhf (2.1.11-stable-1) ...
Setting up libwacom-common (1.1-2) ...
Setting up libxkbcommon0:armhf (0.9.1-1) ...
Setting up libkmldom1:armhf (1.3.0-8) ...
Setting up libwayland-client0:armhf (1.17.0-1+b1) ...
Setting up libspatialite7:armhf (4.3.0a-6+b2) ...
Setting up x11proto-dev (2018.4-4) ...
Setting up libfile-stripnondeterminism-perl (1.6.3-2) ...
Setting up libzvbi0:armhf (0.2.35-16) ...
Setting up libice6:armhf (2:1.0.9-2) ...
Setting up libjsoncpp-dev:armhf (1.7.4-3.1) ...
Setting up libcharls-dev:armhf (2.0.0+dfsg-1) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up libpython3.7-stdlib:armhf (3.7.6-1+b1) ...
Setting up libevent-extra-2.1-7:armhf (2.1.11-stable-1) ...
Setting up tcl8.6 (8.6.10+dfsg-1) ...
Setting up liblapack3:armhf (3.9.0-1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libvulkan-dev:armhf (1.1.126.0-2) ...
Setting up libxcb1:armhf (1.13.1-2) ...
Setting up libgmp-dev:armhf (2:6.1.2+dfsg-4) ...
Setting up libxcb-xfixes0:armhf (1.13.1-2) ...
Setting up libkmlengine1:armhf (1.3.0-8) ...
Setting up libxau-dev:armhf (1:1.0.8-1+b2) ...
Setting up libsymspg-dev:armhf (1.14.1-5) ...
Setting up qt5-qmake:armhf (5.12.5+dfsg-7+rpi1) ...
Setting up nettle-dev:armhf (3.5.1+really3.5.1-2) ...
Setting up libxcb-xinput0:armhf (1.13.1-2) ...
Setting up libwoff1:armhf (1.0.2-1) ...
Setting up libkmlconvenience1:armhf (1.3.0-8) ...
Setting up libice-dev:armhf (2:1.0.9-2) ...
Setting up libpython3.7:armhf (3.7.6-1+b1) ...
Setting up voro++-dev (0.4.6+dfsg1-3) ...
Setting up libtool (2.4.6-11) ...
Setting up libarchive13:armhf (3.4.0-1+b1) ...
Setting up libxcb-render0:armhf (1.13.1-2) ...
Setting up libfftw3-bin (3.3.8-2) ...
Setting up libpcre3-dev:armhf (2:8.39-12) ...
Setting up libjson-c-dev:armhf (0.13.1+dfsg-6) ...
Setting up libfreexl-dev:armhf (1.0.5-3) ...
Setting up libfyba-dev:armhf (4.1.1-6) ...
Setting up libpython3.7-dev:armhf (3.7.6-1+b1) ...
Setting up libxcb-glx0:armhf (1.13.1-2) ...
Setting up libwebpdemux2:armhf (0.6.1-2) ...
Setting up tcl8.6-dev:armhf (8.6.10+dfsg-1) ...
Setting up libedit2:armhf (3.1-20191231-1) ...
Setting up libqt5positioning5:armhf (5.12.5+dfsg-2) ...
Setting up libpng-dev:armhf (1.6.37-1) ...
Setting up libxcb-keysyms1:armhf (0.4.0-1+b2) ...
Setting up libaec-dev:armhf (1.0.4-1) ...
Setting up libarpack2:armhf (3.7.0-3) ...
Setting up libxcb-shape0:armhf (1.13.1-2) ...
Setting up libavahi-common3:armhf (0.7-5) ...
Setting up libjpeg-dev (1:1.5.2-2) ...
Setting up libjbig-dev:armhf (2.1-3.1+b2) ...
Setting up libsuperlu5:armhf (5.2.1+dfsg1-4) ...
Setting up libgfortran-9-dev:armhf (9.2.1-25+rpi1) ...
Setting up libevent-openssl-2.1-7:armhf (2.1.11-stable-1) ...
Setting up m4 (1.4.18-4) ...
Setting up libdap25:armhf (3.20.4-1) ...
Setting up libxcb-render-util0:armhf (0.3.9-1+b1) ...
Setting up libgstreamer-plugins-base1.0-0:armhf (1.16.2-2) ...
Setting up libnss3:armhf (2:3.49.1-1) ...
Setting up libxcb-shm0:armhf (1.13.1-2) ...
Setting up libxcb-icccm4:armhf (0.4.1-1.1) ...
Setting up libkim-api2:armhf (2.1.3-5) ...
Setting up libxcb-util0:armhf (0.3.8-3+b2) ...
Setting up libepsilon1:armhf (0.9.2+dfsg-4) ...
Setting up libkim-api-dev (2.1.3-5) ...
Setting up libdapserver7v5:armhf (3.20.4-1) ...
Setting up libqt5network5:armhf (5.12.5+dfsg-7+rpi1) ...
Setting up libgeotiff5:armhf (1.5.1-2) ...
Setting up libxcb-xkb1:armhf (1.13.1-2) ...
Setting up libxcb-image0:armhf (0.4.0-1+b2) ...
Setting up liburiparser-dev (0.9.3-2) ...
Setting up libnl-route-3-200:armhf (3.4.0-1) ...
Setting up libxcb-present0:armhf (1.13.1-2) ...
Setting up libqt5sql5:armhf (5.12.5+dfsg-7+rpi1) ...
Setting up libthai0:armhf (0.1.28-3) ...
Setting up ca-certificates (20190110) ...
Updating certificates in /etc/ssl/certs...
128 added, 0 removed; done.
Setting up qtbase5-dev-tools (5.12.5+dfsg-7+rpi1) ...
Setting up libvorbisfile3:armhf (1.3.6-2) ...
Setting up libxdmcp-dev:armhf (1:1.1.2-3) ...
Setting up libqt5xml5:armhf (5.12.5+dfsg-7+rpi1) ...
Setting up libxml2-dev:armhf (2.9.4+dfsg1-8) ...
Setting up libwebp-dev:armhf (0.6.1-2) ...
Setting up libxcb-xinerama0:armhf (1.13.1-2) ...
Setting up libunbound8:armhf (1.9.6-1) ...
Setting up libfreetype6:armhf (2.10.1-2) ...
Setting up libtiff-dev:armhf (4.1.0+git191117-2) ...
Setting up libopenjp2-7-dev (2.3.1-1) ...
Setting up libxcb-sync1:armhf (1.13.1-2) ...
Setting up libqt5qml5:armhf (5.12.5-5) ...
Setting up libkmlregionator1:armhf (1.3.0-8) ...
Setting up x11proto-core-dev (2018.4-4) ...
Setting up libpython3.8:armhf (3.8.1-2+b1) ...
Setting up libgeos-dev (3.8.0-1) ...
Setting up libhdf5-103:armhf (1.10.4+repack-10) ...
Setting up shared-mime-info (1.10-1) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up libxkbcommon-x11-0:armhf (0.9.1-1) ...
Setting up qtattributionsscanner-qt5 (5.12.5-2) ...
Setting up libevent-dev (2.1.11-stable-1) ...
Setting up liblapack-dev:armhf (3.9.0-1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode
Setting up libhwloc15:armhf (2.1.0+dfsg-3+rpi1) ...
Setting up libproj-dev:armhf (6.3.0-1) ...
Setting up libeigen3-dev (3.3.7-1) ...
Setting up libgssapi-krb5-2:armhf (1.17-6+b1) ...
Setting up libcroco3:armhf (0.6.13-1) ...
Setting up libodbc1:armhf (2.3.6-0.1+b1) ...
Setting up libqt5webchannel5:armhf (5.12.5-2) ...
Setting up ucf (3.0038+nmu1) ...
Setting up libspatialite-dev:armhf (4.3.0a-6+b2) ...
Setting up libjs-sphinxdoc (1.8.5-5) ...
Setting up libqhull-dev:armhf (2015.2-4) ...
Setting up ocl-icd-opencl-dev:armhf (2.2.12-2) ...
Setting up autoconf (2.69-11.1) ...
Setting up libxcb-dri2-0:armhf (1.13.1-2) ...
Setting up dh-strip-nondeterminism (1.6.3-2) ...
Setting up x11proto-xext-dev (2018.4-4) ...
Setting up libdrm2:armhf (2.4.100-4+rpi1) ...
Setting up dwz (0.13-5) ...
Setting up libnl-3-dev:armhf (3.4.0-1) ...
Setting up libva-drm2:armhf (2.6.1-1) ...
Setting up groff-base (1.22.4-4) ...
Setting up libxcb-randr0:armhf (1.13.1-2) ...
Setting up xml-core (0.18+nmu1) ...
Setting up tcl (8.6.9+1) ...
Setting up libxslt1.1:armhf (1.1.32-2.2) ...
Setting up libx11-6:armhf (2:1.6.8-1) ...
Setting up libharfbuzz0b:armhf (2.6.4-1+rpi1) ...
Setting up libarmadillo9 (1:9.800.4+dfsg-1) ...
Setting up libepsilon-dev:armhf (0.9.2+dfsg-4) ...
Setting up libsuperlu-dev:armhf (5.2.1+dfsg1-4) ...
Setting up x11proto-scrnsaver-dev (2018.4-4) ...
Setting up libwacom2:armhf (1.1-2) ...
Setting up libsm6:armhf (2:1.2.3-1) ...
Setting up libfftw3-dev:armhf (3.3.8-2) ...
Setting up libopenmpt0:armhf (0.4.11-1) ...
Setting up libavahi-client3:armhf (0.7-5) ...
Setting up libllvm9:armhf (1:9.0.1-8+rpi1) ...
Setting up libpython3-stdlib:armhf (3.7.5-3) ...
Setting up libdrm-amdgpu1:armhf (2.4.100-4+rpi1) ...
Setting up libssh-gcrypt-4:armhf (0.9.3-2) ...
Setting up automake (1:1.16.1-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libllvm8:armhf (1:8.0.1-7+rpi1) ...
Setting up libkml-dev:armhf (1.3.0-8) ...
Setting up libxcb-dri3-0:armhf (1.13.1-2) ...
Setting up python3.7 (3.7.6-1+b1) ...
Setting up libibverbs1:armhf (27.0-2) ...
Setting up libgnutls-dane0:armhf (3.6.11.1-2) ...
Setting up libdrm-nouveau2:armhf (2.4.100-4+rpi1) ...
Setting up libarpack2-dev:armhf (3.7.0-3) ...
Setting up gettext (0.19.8.1-10) ...
Setting up libpython3-dev:armhf (3.7.5-3) ...
Setting up libxcb1-dev:armhf (1.13.1-2) ...
Setting up libqt5sql5-sqlite:armhf (5.12.5+dfsg-7+rpi1) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up gfortran-9 (9.2.1-25+rpi1) ...
Setting up libgbm1:armhf (19.3.2-1) ...
Setting up ibverbs-providers:armhf (27.0-2) ...
Setting up libgeotiff-dev:armhf (1.5.1-2) ...
Setting up libsm-dev:armhf (2:1.2.3-1) ...
Setting up libdrm-radeon1:armhf (2.4.100-4+rpi1) ...
Setting up fontconfig-config (2.13.1-2) ...
Setting up openssh-client (1:8.1p1-5) ...
Setting up libgl1-mesa-dri:armhf (19.3.2-1) ...
Setting up libhdf5-cpp-103:armhf (1.10.4+repack-10) ...
Setting up libclang1-8 (1:8.0.1-7+rpi1) ...
Setting up libpq5:armhf (12.1-2) ...
Setting up libx11-dev:armhf (2:1.6.8-1) ...
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up libpq-dev (12.1-2) ...
Setting up libcurl3-gnutls:armhf (7.67.0-2) ...
Setting up python3 (3.7.5-3) ...
Setting up libcurl4-gnutls-dev:armhf (7.67.0-2) ...
Setting up man-db (2.9.0-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up python3-markupsafe (1.1.0-1+b1) ...
Setting up gfortran (4:9.2.1-3.1+rpi1) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up python3.7-dev (3.7.6-1+b1) ...
Setting up python3-tz (2019.3-1) ...
Setting up libxxf86vm1:armhf (1:1.1.4-1+b2) ...
Setting up libinput-bin (1.14.3-1) ...
Setting up libfreetype-dev:armhf (2.10.1-2) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libxnvctrl0:armhf (435.21-1) ...
Setting up libnetcdf15:armhf (1:4.7.3-1) ...
Setting up python3-six (1.14.0-2) ...
Setting up libnl-route-3-dev:armhf (3.4.0-1) ...
Setting up libltdl-dev:armhf (2.4.6-11) ...
Setting up python3-roman (2.0.0-3) ...
Setting up python3-jinja2 (2.10.1-1) ...
Setting up python3-pygments (2.3.1+dfsg-1) ...
Setting up libegl-mesa0:armhf (19.3.2-1) ...
Setting up libcfitsio8:armhf (3.470-3) ...
Setting up python3-pyparsing (2.4.2-1) ...
Setting up python3-certifi (2019.11.28-1) ...
Setting up libpython3.8-dev:armhf (3.8.1-2+b1) ...
Setting up libxfixes3:armhf (1:5.0.3-1) ...
Setting up libpython3-all-dev:armhf (3.7.5-3) ...
Setting up libgdk-pixbuf2.0-0:armhf (2.40.0+dfsg-2+rpi1) ...
Setting up python3-incremental (16.10.1-3.1) ...
Setting up sphinx-common (1.8.5-5) ...
Setting up libhdf5-dev (1.10.4+repack-10) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5-serial.pc to provide /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5.pc (hdf5.pc) in auto mode
Setting up python3-idna (2.6-2) ...
Setting up cython3 (0.29.14-0.1) ...
Setting up python3-pyqrcode (1.2.1-4) ...
Setting up libnetcdf-dev (1:4.7.3-1) ...
Setting up libxt6:armhf (1:1.1.5-1+b3) ...
Setting up tcl-dev:armhf (8.6.9+1) ...
Setting up python3-urllib3 (1.25.6-5) ...
Setting up python3.8-dev (3.8.1-2+b1) ...
Setting up libxext-dev:armhf (2:1.3.3-1+b2) ...
Setting up libcups2:armhf (2.3.1-4) ...
Setting up libvdpau1:armhf (1.3-1+b3) ...
Setting up libdapclient6v5:armhf (3.20.4-1) ...
Setting up libegl1:armhf (1.3.0-7) ...
Setting up python3-pyasn1 (0.4.2-3) ...
Setting up python3-wsaccel (0.6.2-2+rpi1) ...
Setting up cmake (3.15.4-1+rpi1) ...
Setting up python3-snappy (0.5.3-1.1) ...
Setting up python3-constantly (15.1.0-1) ...
Setting up libhwloc-dev:armhf (2.1.0+dfsg-3+rpi1) ...
Setting up libxss1:armhf (1:1.2.3-1) ...
Setting up libfontconfig1:armhf (2.13.1-2) ...
Setting up python3-ubjson (0.14.0-2) ...
Setting up libbluray2:armhf (1:1.1.2-2) ...
Setting up python3-trie (0.2+ds-2) ...
Setting up libva-x11-2:armhf (2.6.1-1) ...
Setting up python3-lib2to3 (3.8.0-1) ...
Setting up libxrender-dev:armhf (1:0.9.10-1) ...
Setting up python3-asn1crypto (0.24.0-1) ...
Setting up python3-u-msgpack (2.1-1) ...
Setting up libdap-dev:armhf (3.20.4-1) ...
Setting up python3-cffi-backend (1.13.2-1+b2) ...
Setting up python3-imagesize (1.2.0-1) ...
Setting up python3-pkg-resources (44.0.0-1) ...
Setting up python3-cbor (1.0.0-1.1) ...
Setting up python3-distutils (3.8.0-1) ...
Setting up dh-python (4.20191017) ...
Setting up libgnutls28-dev:armhf (3.6.11.1-2) ...
Setting up libinput10:armhf (1.14.3-1) ...
Setting up python3-attr (18.2.0-1) ...
Setting up fontconfig (2.13.1-2) ...
Regenerating fonts cache... done.
Setting up libxft2:armhf (2.3.2-2) ...
Setting up libcfitsio-dev:armhf (3.470-3) ...
Setting up libxdamage1:armhf (1:1.1.5-1) ...
Setting up libxerces-c3.2:armhf (3.2.2+debian-1+b1) ...
Setting up python3-babel (2.6.0+dfsg.1-1) ...
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Setting up python3-lz4 (3.0.2+dfsg-1) ...
Setting up python3-zope.interface (4.6.0-4) ...
Setting up python3-alabaster (0.7.8-1) ...
Setting up qdoc-qt5 (5.12.5-2) ...
Setting up po-debconf (1.0.21) ...
Setting up libtk8.6:armhf (8.6.10-1) ...
Setting up python3-automat (0.6.0-1) ...
Setting up libpango-1.0-0:armhf (1.42.4-7+b1) ...
Setting up libqt5gui5:armhf (5.12.5+dfsg-7+rpi1) ...
Setting up python3-twisted-bin:armhf (18.9.0-3) ...
Setting up libpoppler82:armhf (0.71.0-6) ...
Setting up python3-all (3.7.5-3) ...
Setting up libqt5widgets5:armhf (5.12.5+dfsg-7+rpi1) ...
Setting up libibverbs-dev:armhf (27.0-2) ...
Setting up libxss-dev:armhf (1:1.2.3-1) ...
Setting up libhwloc-plugins:armhf (2.1.0+dfsg-3+rpi1) ...
Setting up libqt5help5:armhf (5.12.5-2) ...
Setting up libcairo2:armhf (1.16.0-4) ...
Setting up libnetcdf-c++4 (4.2-11+b1) ...
Setting up libavutil56:armhf (7:4.2.2-1) ...
Setting up libfreetype6-dev:armhf (2.10.1-2) ...
Setting up libarmadillo-dev (1:9.800.4+dfsg-1) ...
Setting up libqt5printsupport5:armhf (5.12.5+dfsg-7+rpi1) ...
Setting up python3-packaging (19.1-2) ...
Setting up python3-chardet (3.0.4-4) ...
Setting up libxt-dev:armhf (1:1.1.5-1+b3) ...
Setting up libxerces-c-dev (3.2.2+debian-1+b1) ...
Setting up python3-pyasn1-modules (0.2.1-0.2) ...
Setting up python3-cryptography (2.6.1-4) ...
Setting up python3-dev (3.7.5-3) ...
Setting up python3-requests (2.22.0-2) ...
Setting up python3-hyperlink (19.0.0-1) ...
Setting up python3-service-identity (18.1.0-5) ...
Setting up libhdf4-alt-dev (4.2.14-1+b6) ...
Setting up libmariadb-dev (1:10.3.22-1) ...
Setting up libqt5opengl5:armhf (5.12.5+dfsg-7+rpi1) ...
Setting up libtheora0:armhf (1.1.1+dfsg.1-15) ...
Setting up libswscale5:armhf (7:4.2.2-1) ...
Setting up libpangoft2-1.0-0:armhf (1.42.4-7+b1) ...
Setting up libqt5quick5:armhf (5.12.5-5) ...
Setting up python3-nacl (1.3.0-4) ...
Setting up libpangocairo-1.0-0:armhf (1.42.4-7+b1) ...
Setting up libpoppler-dev:armhf (0.71.0-6) ...
Setting up python3-all-dev (3.7.5-3) ...
Setting up libavutil-dev:armhf (7:4.2.2-1) ...
Setting up libqt5quickshapes5:armhf (5.12.5-5) ...
Setting up tk8.6 (8.6.10-1) ...
Setting up libmariadb-dev-compat:armhf (1:10.3.22-1) ...
Setting up libqt5x11extras5:armhf (5.12.5-1) ...
Setting up libqt5quicktest5:armhf (5.12.5-5) ...
Setting up libfontconfig1-dev:armhf (2.13.1-2) ...
Setting up libglx-mesa0:armhf (19.3.2-1) ...
Setting up libglx0:armhf (1.3.0-7) ...
Setting up libqt5designer5:armhf (5.12.5-2) ...
Setting up libpmix2:armhf (3.1.4-1+b1) ...
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Setting up qhelpgenerator-qt5 (5.12.5-2) ...
Setting up libqt5webkit5:armhf (5.212.0~alpha3-6+rpi1) ...
Setting up libnetcdf-cxx-legacy-dev (4.2-11+b1) ...
Setting up libqt5designercomponents5:armhf (5.12.5-2) ...
Setting up libswresample3:armhf (7:4.2.2-1) ...
Setting up qt5-qmltooling-plugins:armhf (5.12.5-5) ...
Setting up libqt5quickwidgets5:armhf (5.12.5-5) ...
Setting up librsvg2-2:armhf (2.46.4-1) ...
Setting up libhdf5-openmpi-103:armhf (1.10.4+repack-10) ...
Setting up libgl1:armhf (1.3.0-7) ...
Setting up libtheora-dev:armhf (1.1.1+dfsg.1-15) ...
Setting up python3-twisted (18.9.0-3) ...
/usr/lib/python3/dist-packages/twisted/conch/client/knownhosts.py:492: SyntaxWarning: "is" with a literal. Did you mean "=="?
if keytype is "EC":
Setting up libswscale-dev:armhf (7:4.2.2-1) ...
Setting up qt5-assistant (5.12.5-2) ...
Setting up libglew2.1:armhf (2.1.0-4) ...
Setting up qttools5-dev-tools (5.12.5-2) ...
Setting up libglx-dev:armhf (1.3.0-7) ...
Setting up libavcodec58:armhf (7:4.2.2-1) ...
Setting up python3-txaio (2.10.0-2) ...
Setting up python3-autobahn (17.10.1+dfsg1-6+rvt) ...
Setting up libglu1-mesa:armhf (9.0.1-1) ...
Setting up libqt5quickparticles5:armhf (5.12.5-5) ...
Setting up tk (8.6.9+1) ...
Setting up libgl-dev:armhf (1.3.0-7) ...
Setting up openmpi-bin (4.0.2-5+rpi1) ...
update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode
update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode
Setting up libxft-dev:armhf (2.3.2-2) ...
Setting up libchromaprint1:armhf (1.4.3-3) ...
Setting up default-libmysqlclient-dev:armhf (1.0.5+b5) ...
Setting up libegl-dev:armhf (1.3.0-7) ...
Setting up libswresample-dev:armhf (7:4.2.2-1) ...
Setting up libavformat58:armhf (7:4.2.2-1) ...
Setting up libavcodec-dev:armhf (7:4.2.2-1) ...
Setting up mpi-default-bin (1.13) ...
Setting up libavformat-dev:armhf (7:4.2.2-1) ...
Setting up python3-mpi4py (3.0.3-4) ...
Setting up libgl2ps1.4 (1.4.0+dfsg1-2) ...
Setting up libglu1-mesa-dev:armhf (9.0.1-1) ...
Setting up tk8.6-dev:armhf (8.6.10-1) ...
Setting up libgl1-mesa-dev:armhf (19.3.2-1) ...
Setting up libopenmpi-dev:armhf (4.0.2-5+rpi1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/openmpi/include to provide /usr/include/arm-linux-gnueabihf/mpi (mpi-arm-linux-gnueabihf) in auto mode
Setting up libgles-dev:armhf (1.3.0-7) ...
Setting up libhdf5-openmpi-dev (1.10.4+repack-10) ...
update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode
Setting up libgl2ps-dev (1.4.0+dfsg1-2) ...
Setting up libglew-dev:armhf (2.1.0-4) ...
Setting up tk-dev:armhf (8.6.9+1) ...
Setting up qtbase5-dev:armhf (5.12.5+dfsg-7+rpi1) ...
Setting up qtdeclarative5-dev:armhf (5.12.5-5) ...
Setting up mpi-default-dev (1.13) ...
Setting up libqt5opengl5-dev:armhf (5.12.5+dfsg-7+rpi1) ...
Setting up libqt5webkit5-dev:armhf (5.212.0~alpha3-6+rpi1) ...
Setting up libhdf5-mpi-dev (1.10.4+repack-10) ...
Setting up qttools5-dev:armhf (5.12.5-2) ...
Setting up qttools5-private-dev:armhf (5.12.5-2) ...
Setting up dh-autoreconf (19) ...
Setting up odbcinst (2.3.6-0.1+b1) ...
Setting up debhelper (12.9) ...
Setting up odbcinst1debian2:armhf (2.3.6-0.1+b1) ...
Setting up unixodbc-dev:armhf (2.3.6-0.1+b1) ...
Setting up libgdal26 (3.0.3+dfsg-1+b1) ...
Setting up libvtk7.1p (7.1.1+dfsg2-1+b2) ...
Setting up libvtk7.1p-qt (7.1.1+dfsg2-1+b2) ...
Setting up libvtk7-jni (7.1.1+dfsg2-1+b2) ...
Setting up libgdal-dev (3.0.3+dfsg-1+b1) ...
Setting up tcl-vtk7 (7.1.1+dfsg2-1+b2) ...
Setting up libvtk7-java (7.1.1+dfsg2-1+b2) ...
Setting up vtk7 (7.1.1+dfsg2-1+b2) ...
Setting up python3-vtk7 (7.1.1+dfsg2-1+b2) ...
/usr/lib/python3/dist-packages/vtk/numpy_interface/algorithms.py:200: SyntaxWarning: "is" with a literal. Did you mean "=="?
if max_dims is 1:
Setting up libvtk7-dev (7.1.1+dfsg2-1+b2) ...
Setting up libvtk7-qt-dev (7.1.1+dfsg2-1+b2) ...
Processing triggers for libc-bin (2.29-7+rpi1) ...
Processing triggers for sgml-base (1.29.1) ...
Setting up docutils-common (0.16+dfsg-1) ...
Processing triggers for sgml-base (1.29.1) ...
Setting up python3-docutils (0.16+dfsg-1) ...
update-alternatives: using /usr/share/docutils/scripts/python3/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html to provide /usr/bin/rst2html (rst2html) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html4 to provide /usr/bin/rst2html4 (rst2html4) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html5 to provide /usr/bin/rst2html5 (rst2html5) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2man to provide /usr/bin/rst2man (rst2man) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt to provide /usr/bin/rst2odt (rst2odt) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2xetex to provide /usr/bin/rst2xetex (rst2xetex) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode
Setting up python3-sphinx (1.8.5-5) ...
update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-apidoc to provide /usr/bin/sphinx-apidoc (sphinx-apidoc) in auto mode
update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-autogen to provide /usr/bin/sphinx-autogen (sphinx-autogen) in auto mode
update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-build to provide /usr/bin/sphinx-build (sphinx-build) in auto mode
update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-quickstart to provide /usr/bin/sphinx-quickstart (sphinx-quickstart) in auto mode
Setting up sbuild-build-depends-lammps-dummy (0.invalid.0) ...
Processing triggers for ca-certificates (20190110) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.19.20-v7+ armhf (armv7l)
Toolchain package versions: binutils_2.33.90.20200122-2+rpi1 dpkg-dev_1.19.7 g++-9_9.2.1-25+rpi1 gcc-9_9.2.1-25+rpi1 libc6-dev_2.29-7+rpi1 libstdc++-9-dev_9.2.1-25+rpi1 libstdc++6_9.2.1-25+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2
Package versions: adduser_3.118 apt_1.8.4 autoconf_2.69-11.1 automake_1:1.16.1-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.47 bash_5.0-5 binutils_2.33.90.20200122-2+rpi1 binutils-arm-linux-gnueabihf_2.33.90.20200122-2+rpi1 binutils-common_2.33.90.20200122-2+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.34-0.1 build-essential_12.8 bzip2_1.0.8-2 ca-certificates_20190110 cmake_3.15.4-1+rpi1 cmake-data_3.15.4-1+rpi1 coreutils_8.30-3 cpp_4:9.2.1-3.1+rpi1 cpp-9_9.2.1-25+rpi1 cython3_0.29.14-0.1 dash_0.5.10.2-6 debconf_1.5.73 debhelper_12.9 debianutils_4.9.1 default-libmysqlclient-dev_1.0.5+b5 dh-autoreconf_19 dh-python_4.20191017 dh-strip-nondeterminism_1.6.3-2 diffutils_1:3.7-3 dirmngr_2.2.19-1 docutils-common_0.16+dfsg-1 dpkg_1.19.7 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.5-2 fakeroot_1.24-1 fdisk_2.34-0.1 file_1:5.38-4 findutils_4.7.0-1 fontconfig_2.13.1-2 fontconfig-config_2.13.1-2 fonts-dejavu-core_2.37-1 g++_4:9.2.1-3.1+rpi1 g++-9_9.2.1-25+rpi1 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libxcb-xkb1_1.13.1-2 libxcb1_1.13.1-2 libxcb1-dev_1.13.1-2 libxdamage1_1:1.1.5-1 libxdmcp-dev_1:1.1.2-3 libxdmcp6_1:1.1.2-3 libxerces-c-dev_3.2.2+debian-1+b1 libxerces-c3.2_3.2.2+debian-1+b1 libxext-dev_2:1.3.3-1+b2 libxext6_2:1.3.3-1+b2 libxfixes3_1:5.0.3-1 libxft-dev_2.3.2-2 libxft2_2.3.2-2 libxkbcommon-x11-0_0.9.1-1 libxkbcommon0_0.9.1-1 libxml2_2.9.4+dfsg1-8 libxml2-dev_2.9.4+dfsg1-8 libxnvctrl0_435.21-1 libxrender-dev_1:0.9.10-1 libxrender1_1:0.9.10-1 libxshmfence1_1.3-1 libxslt1.1_1.1.32-2.2 libxss-dev_1:1.2.3-1 libxss1_1:1.2.3-1 libxt-dev_1:1.1.5-1+b3 libxt6_1:1.1.5-1+b3 libxvidcore4_2:1.3.6-1 libxxf86vm1_1:1.1.4-1+b2 libz3-4_4.8.7-4 libzstd-dev_1.4.4+dfsg-1+rpi1 libzstd1_1.4.4+dfsg-1+rpi1 libzvbi-common_0.2.35-16 libzvbi0_0.2.35-16 linux-libc-dev_5.2.17-1+rpi1+b2 login_1:4.8-1 logsave_1.45.5-2 lsb-base_11.1.0+rpi1 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.0-2 mariadb-common_1:10.3.22-1 mawk_1.3.4.20200120-1 mime-support_3.64 mount_2.34-0.1 mpi-default-bin_1.13 mpi-default-dev_1.13 mysql-common_5.8+1.0.5 ncurses-base_6.1+20191019-1 ncurses-bin_6.1+20191019-1 nettle-dev_3.5.1+really3.5.1-2 ocl-icd-libopencl1_2.2.12-2 ocl-icd-opencl-dev_2.2.12-2 odbcinst_2.3.6-0.1+b1 odbcinst1debian2_2.3.6-0.1+b1 opencl-c-headers_2.2~2019.08.06-g0d5f18c-1 openmpi-bin_4.0.2-5+rpi1 openmpi-common_4.0.2-5+rpi1 openssh-client_1:8.1p1-5 openssl_1.1.1d-2 passwd_1:4.8-1 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.28_5.28.1-6 perl-modules-5.30_5.30.0-9 pinentry-curses_1.1.0-3 pkg-config_0.29-6 po-debconf_1.0.21 procps_2:3.3.15-2 proj-data_6.3.0-1 python-babel-localedata_2.6.0+dfsg.1-1 python3_3.7.5-3 python3-alabaster_0.7.8-1 python3-all_3.7.5-3 python3-all-dev_3.7.5-3 python3-asn1crypto_0.24.0-1 python3-attr_18.2.0-1 python3-autobahn_17.10.1+dfsg1-6+rvt python3-automat_0.6.0-1 python3-babel_2.6.0+dfsg.1-1 python3-cbor_1.0.0-1.1 python3-certifi_2019.11.28-1 python3-cffi-backend_1.13.2-1+b2 python3-chardet_3.0.4-4 python3-constantly_15.1.0-1 python3-cryptography_2.6.1-4 python3-dev_3.7.5-3 python3-distutils_3.8.0-1 python3-docutils_0.16+dfsg-1 python3-hyperlink_19.0.0-1 python3-idna_2.6-2 python3-imagesize_1.2.0-1 python3-incremental_16.10.1-3.1 python3-jinja2_2.10.1-1 python3-lib2to3_3.8.0-1 python3-lz4_3.0.2+dfsg-1 python3-markupsafe_1.1.0-1+b1 python3-minimal_3.7.5-3 python3-mpi4py_3.0.3-4 python3-nacl_1.3.0-4 python3-openssl_19.0.0-1 python3-packaging_19.1-2 python3-pkg-resources_44.0.0-1 python3-pyasn1_0.4.2-3 python3-pyasn1-modules_0.2.1-0.2 python3-pygments_2.3.1+dfsg-1 python3-pyparsing_2.4.2-1 python3-pyqrcode_1.2.1-4 python3-requests_2.22.0-2 python3-roman_2.0.0-3 python3-service-identity_18.1.0-5 python3-six_1.14.0-2 python3-snappy_0.5.3-1.1 python3-sphinx_1.8.5-5 python3-trie_0.2+ds-2 python3-twisted_18.9.0-3 python3-twisted-bin_18.9.0-3 python3-txaio_2.10.0-2 python3-tz_2019.3-1 python3-u-msgpack_2.1-1 python3-ubjson_0.14.0-2 python3-urllib3_1.25.6-5 python3-vtk7_7.1.1+dfsg2-1+b2 python3-wsaccel_0.6.2-2+rpi1 python3-zope.interface_4.6.0-4 python3.7_3.7.6-1+b1 python3.7-dev_3.7.6-1+b1 python3.7-minimal_3.7.6-1+b1 python3.8_3.8.1-2+b1 python3.8-dev_3.8.1-2+b1 python3.8-minimal_3.8.1-2+b1 qdoc-qt5_5.12.5-2 qhelpgenerator-qt5_5.12.5-2 qt5-assistant_5.12.5-2 qt5-qmake_5.12.5+dfsg-7+rpi1 qt5-qmake-bin_5.12.5+dfsg-7+rpi1 qt5-qmltooling-plugins_5.12.5-5 qtattributionsscanner-qt5_5.12.5-2 qtbase5-dev_5.12.5+dfsg-7+rpi1 qtbase5-dev-tools_5.12.5+dfsg-7+rpi1 qtchooser_66-2 qtdeclarative5-dev_5.12.5-5 qtdeclarative5-dev-tools_5.12.5-5 qttools5-dev_5.12.5-2 qttools5-dev-tools_5.12.5-2 qttools5-private-dev_5.12.5-2 raspbian-archive-keyring_20120528.2 readline-common_8.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-lammps-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sgml-base_1.29.1 shared-mime-info_1.10-1 sphinx-common_1.8.5-5 sysvinit-utils_2.96-2.1 tar_1.30+dfsg-6 tcl_8.6.9+1 tcl-dev_8.6.9+1 tcl-vtk7_7.1.1+dfsg2-1+b2 tcl8.6_8.6.10+dfsg-1 tcl8.6-dev_8.6.10+dfsg-1 tk_8.6.9+1 tk-dev_8.6.9+1 tk8.6_8.6.10-1 tk8.6-dev_8.6.10-1 tzdata_2019c-3 ucf_3.0038+nmu1 unixodbc-dev_2.3.6-0.1+b1 util-linux_2.34-0.1 uuid-dev_2.34-0.1 voro++-dev_0.4.6+dfsg1-3 vtk7_7.1.1+dfsg2-1+b2 x11-common_1:7.7+20 x11proto-core-dev_2018.4-4 x11proto-dev_2018.4-4 x11proto-scrnsaver-dev_2018.4-4 x11proto-xext-dev_2018.4-4 xkb-data_2.26-2 xml-core_0.18+nmu1 xorg-sgml-doctools_1:1.11-1 xtrans-dev_1.3.5-1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1 zlib1g-dev_1:1.2.11.dfsg-1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Wed Jan 15 21:17:07 2020 UTC
gpgv: using RSA key BBBD45EA818AB86FF67E7285D3E17383CFA7FF06
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./lammps_20191120+dfsg1-2.dsc
dpkg-source: info: extracting lammps in /<<BUILDDIR>>/lammps-20191120+dfsg1
dpkg-source: info: unpacking lammps_20191120+dfsg1.orig.tar.xz
dpkg-source: info: unpacking lammps_20191120+dfsg1-2.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying 10_enable_spglib.patch
dpkg-source: info: applying 20_set_potentials_path.patch
dpkg-source: info: applying build_docs.patch
dpkg-source: info: applying python_lib_soname.patch
dpkg-source: info: applying fix_man.patch
Check disk space
----------------
Sufficient free space for build
Hack binNMU version
-------------------
Created changelog entry for binNMU version 20191120+dfsg1-2+b1
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DBUS_SESSION_BUS_ADDRESS=unix:path=/run/user/112/bus
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
INVOCATION_ID=c605eeb4e47242eab5a84ad883abfd9b
JOURNAL_STREAM=8:18382
LANG=en_GB.UTF-8
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PWD=/
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=116
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-220fd8ed-0e5d-41a5-bb22-a40bf8ac365d
SCHROOT_UID=112
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
XDG_RUNTIME_DIR=/run/user/112
XDG_SESSION_ID=c35433
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package lammps
dpkg-buildpackage: info: source version 20191120+dfsg1-2+b1
dpkg-buildpackage: info: source distribution bullseye-staging
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean --with python3,sphinxdoc --sourcedirectory=cmake --builddirectory=/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1'
dh_auto_clean
rm -rf /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build
make[1]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1'
dh_autoreconf_clean -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-20191120\+dfsg1/debian/build
dh_clean -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-20191120\+dfsg1/debian/build
debian/rules build-arch
dh build-arch --with python3,sphinxdoc --sourcedirectory=cmake --builddirectory=/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build
dh_update_autotools_config -a -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-20191120\+dfsg1/debian/build
dh_autoreconf -a -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-20191120\+dfsg1/debian/build
debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1'
dh_auto_configure -- \
-DBUILD_LIB=ON -DBUILD_SHARED_LIBS=ON \
-DCMAKE_SKIP_INSTALL_RPATH=TRUE \
-DPKG_ASPHERE=ON \
-DPKG_BODY=ON \
-DPKG_CLASS2=ON \
-DPKG_COLLOID=ON \
-DPKG_COMPRESS=ON \
-DPKG_CORESHELL=ON \
-DPKG_DIPOLE=ON \
-DPKG_GPU=ON \
-DPKG_GRANULAR=ON \
-DPKG_KIM=ON \
-DPKG_KSPACE=ON \
-DPKG_MANYBODY=ON \
-DPKG_MC=ON \
-DPKG_MISC=ON \
-DPKG_MOLECULE=ON \
-DPKG_MPIIO=ON \
-DPKG_OPT=ON \
-DPKG_PERI=ON \
-DPKG_POEMS=ON \
-DPKG_PYTHON=ON \
-DPKG_QEQ=ON \
-DPKG_REPLICA=ON \
-DPKG_RIGID=ON \
-DPKG_SHOCK=ON \
-DPKG_SNAP=ON \
-DPKG_SRD=ON \
-DPKG_USER-ATC=ON \
-DPKG_USER-AWPMD=ON \
-DPKG_USER-BOCS=ON \
-DPKG_USER-CGDNA=ON \
-DPKG_USER-CGSDK=ON \
-DPKG_USER-DIFFRACTION=ON \
-DPKG_USER-DPD=ON \
-DPKG_USER-DRUDE=ON \
-DPKG_USER-EFF=ON \
-DPKG_USER-FEP=ON \
-DPKG_USER-H5MD=ON \
-DPKG_USER-LB=ON \
-DPKG_USER-MANIFOLD=ON \
-DPKG_USER-MEAMC=ON \
-DPKG_USER-MESO=ON \
-DPKG_USER-MGPT=ON \
-DPKG_USER-MISC=ON \
-DPKG_USER-MOFFF=ON \
-DPKG_USER-MOLFILE=ON \
-DPKG_USER-NETCDF=ON \
-DPKG_USER-OMP=ON \
-DPKG_USER-PHONON=ON \
-DPKG_USER-QTB=ON \
-DPKG_USER-REAXC=OFF \
-DPKG_USER-SMD=ON \
-DPKG_USER-SMTBQ=ON \
-DPKG_USER-SPH=ON \
-DPKG_USER-TALLY=ON \
-DPKG_USER-UEF=ON \
-DPKG_USER-VTK=ON \
-DPKG_VORONOI=ON
cd debian/build && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf -DBUILD_LIB=ON -DBUILD_SHARED_LIBS=ON -DCMAKE_SKIP_INSTALL_RPATH=TRUE -DPKG_ASPHERE=ON -DPKG_BODY=ON -DPKG_CLASS2=ON -DPKG_COLLOID=ON -DPKG_COMPRESS=ON -DPKG_CORESHELL=ON -DPKG_DIPOLE=ON -DPKG_GPU=ON -DPKG_GRANULAR=ON -DPKG_KIM=ON -DPKG_KSPACE=ON -DPKG_MANYBODY=ON -DPKG_MC=ON -DPKG_MISC=ON -DPKG_MOLECULE=ON -DPKG_MPIIO=ON -DPKG_OPT=ON -DPKG_PERI=ON -DPKG_POEMS=ON -DPKG_PYTHON=ON -DPKG_QEQ=ON -DPKG_REPLICA=ON -DPKG_RIGID=ON -DPKG_SHOCK=ON -DPKG_SNAP=ON -DPKG_SRD=ON -DPKG_USER-ATC=ON -DPKG_USER-AWPMD=ON -DPKG_USER-BOCS=ON -DPKG_USER-CGDNA=ON -DPKG_USER-CGSDK=ON -DPKG_USER-DIFFRACTION=ON -DPKG_USER-DPD=ON -DPKG_USER-DRUDE=ON -DPKG_USER-EFF=ON -DPKG_USER-FEP=ON -DPKG_USER-H5MD=ON -DPKG_USER-LB=ON -DPKG_USER-MANIFOLD=ON -DPKG_USER-MEAMC=ON -DPKG_USER-MESO=ON -DPKG_USER-MGPT=ON -DPKG_USER-MISC=ON -DPKG_USER-MOFFF=ON -DPKG_USER-MOLFILE=ON -DPKG_USER-NETCDF=ON -DPKG_USER-OMP=ON -DPKG_USER-PHONON=ON -DPKG_USER-QTB=ON -DPKG_USER-REAXC=OFF -DPKG_USER-SMD=ON -DPKG_USER-SMTBQ=ON -DPKG_USER-SPH=ON -DPKG_USER-TALLY=ON -DPKG_USER-UEF=ON -DPKG_USER-VTK=ON -DPKG_VORONOI=ON ../../cmake
-- The CXX compiler identification is GNU 9.2.1
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Could NOT find Git (missing: GIT_EXECUTABLE)
-- Running check for auto-generated files from make-based build system
-- Found MPI_CXX: /usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi_cxx.so (found version "3.1")
-- Found MPI: TRUE (found version "3.1")
-- The C compiler identification is GNU 9.2.1
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Looking for sgemm_
-- Looking for sgemm_ - not found
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- Looking for sgemm_
-- Looking for sgemm_ - found
-- Found BLAS: /usr/lib/arm-linux-gnueabihf/libblas.so
-- Looking for cheev_
-- Looking for cheev_ - not found
-- Looking for cheev_
-- Looking for cheev_ - found
-- A library with LAPACK API found.
-- Found JPEG: /usr/lib/arm-linux-gnueabihf/libjpeg.so (found version "62")
-- Found PNG: /usr/lib/arm-linux-gnueabihf/libpng.so (found version "1.6.37")
-- Found ZLIB: /usr/lib/arm-linux-gnueabihf/libz.so (found version "1.2.11")
-- Found GZIP: /bin/gzip
-- Could NOT find FFMPEG (missing: FFMPEG_EXECUTABLE)
-- Found PkgConfig: /usr/bin/pkg-config (found version "0.29")
-- Checking for module 'fftw3'
-- Found fftw3, version 3.3.8
-- Found FFTW3: /usr/lib/arm-linux-gnueabihf/libfftw3.so
-- Found PythonLibs: /usr/lib/arm-linux-gnueabihf/libpython3.8.so (found version "3.8.1")
-- Found VORO: /usr/lib/arm-linux-gnueabihf/libvoro++.so
-- Found NetCDF: /usr/lib/arm-linux-gnueabihf/libnetcdf.so
-- The imported target "vtkCommonCoreJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkCommonCoreJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkCommonMathJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkCommonMathJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkCommonMiscJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkCommonMiscJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkCommonSystemJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkCommonSystemJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkCommonTransformsJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkCommonTransformsJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkCommonDataModelJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkCommonDataModelJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkCommonColorJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkCommonColorJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkCommonExecutionModelJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkCommonExecutionModelJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkCommonComputationalGeometryJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkCommonComputationalGeometryJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkFiltersCoreJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkFiltersCoreJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkFiltersGeneralJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkFiltersGeneralJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkImagingCoreJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkImagingCoreJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkImagingFourierJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkImagingFourierJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkFiltersStatisticsJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkFiltersStatisticsJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkFiltersExtractionJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkFiltersExtractionJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkInfovisCoreJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkInfovisCoreJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkFiltersGeometryJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkFiltersGeometryJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkFiltersSourcesJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkFiltersSourcesJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkRenderingCoreJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkRenderingCoreJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkRenderingFreeTypeJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkRenderingFreeTypeJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkRenderingContext2DJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkRenderingContext2DJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkChartsCoreJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkChartsCoreJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOCoreJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOCoreJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOLegacyJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOLegacyJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOXMLParserJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOXMLParserJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkDomainsChemistryJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkDomainsChemistryJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOImageJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOImageJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkRenderingOpenGL2Java" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkRenderingOpenGL2Java.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkDomainsChemistryOpenGL2Java" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkDomainsChemistryOpenGL2Java.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOXMLJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOXMLJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkParallelCoreJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkParallelCoreJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkFiltersAMRJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkFiltersAMRJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkFiltersFlowPathsJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkFiltersFlowPathsJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkFiltersGenericJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkFiltersGenericJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkImagingSourcesJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkImagingSourcesJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkFiltersHybridJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkFiltersHybridJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkFiltersHyperTreeJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkFiltersHyperTreeJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkImagingGeneralJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkImagingGeneralJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkFiltersImagingJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkFiltersImagingJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkFiltersModelingJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkFiltersModelingJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkFiltersParallelJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkFiltersParallelJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkParallelMPIJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkParallelMPIJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkFiltersParallelDIY2Java" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkFiltersParallelDIY2Java.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkFiltersParallelFlowPathsJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkFiltersParallelFlowPathsJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkFiltersParallelGeometryJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkFiltersParallelGeometryJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkFiltersParallelImagingJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkFiltersParallelImagingJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkFiltersParallelMPIJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkFiltersParallelMPIJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkFiltersParallelStatisticsJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkFiltersParallelStatisticsJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkFiltersPointsJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkFiltersPointsJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkFiltersProgrammableJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkFiltersProgrammableJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkFiltersReebGraphJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkFiltersReebGraphJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkFiltersSMPJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkFiltersSMPJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkFiltersSelectionJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkFiltersSelectionJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkFiltersTextureJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkFiltersTextureJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkFiltersVerdictJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkFiltersVerdictJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkInteractionStyleJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkInteractionStyleJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOSQLJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOSQLJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkImagingHybridJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkImagingHybridJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkInfovisLayoutJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkInfovisLayoutJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkImagingColorJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkImagingColorJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkRenderingAnnotationJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkRenderingAnnotationJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkRenderingVolumeJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkRenderingVolumeJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkInteractionWidgetsJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkInteractionWidgetsJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkViewsCoreJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkViewsCoreJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkGeovisCoreJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkGeovisCoreJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOAMRJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOAMRJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOEnSightJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOEnSightJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOExodusJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOExodusJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkRenderingGL2PSOpenGL2Java" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkRenderingGL2PSOpenGL2Java.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOExportJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOExportJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOMovieJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOMovieJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOFFMPEGJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOFFMPEGJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOGDALJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOGDALJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOGeoJSONJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOGeoJSONJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOGeometryJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOGeometryJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOImportJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOImportJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOInfovisJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOInfovisJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOLSDynaJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOLSDynaJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOMINCJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOMINCJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOMPIImageJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOMPIImageJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIONetCDFJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIONetCDFJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOParallelJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOParallelJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOMPIParallelJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOMPIParallelJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOMySQLJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOMySQLJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOODBCJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOODBCJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOPLYJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOPLYJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOParallelExodusJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOParallelExodusJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOParallelLSDynaJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOParallelLSDynaJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOParallelNetCDFJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOParallelNetCDFJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOParallelXMLJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOParallelXMLJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOPostgreSQLJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOPostgreSQLJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOTecplotTableJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOTecplotTableJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOVPICJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOVPICJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOVideoJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOVideoJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOXdmf2Java" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkIOXdmf2Java.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkImagingMathJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkImagingMathJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkImagingMorphologicalJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkImagingMorphologicalJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkImagingStatisticsJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkImagingStatisticsJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkImagingStencilJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkImagingStencilJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkInfovisBoostGraphAlgorithmsJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkInfovisBoostGraphAlgorithmsJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkInteractionImageJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkInteractionImageJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkParseOGLExt" references the file
"/usr/bin/vtkParseOGLExt-7.1"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkPythonInterpreterJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkPythonInterpreterJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkRenderingContextOpenGL2Java" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkRenderingContextOpenGL2Java.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkRenderingExternalJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkRenderingExternalJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkRenderingImageJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkRenderingImageJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkRenderingLICOpenGL2Java" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkRenderingLICOpenGL2Java.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkRenderingLODJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkRenderingLODJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkRenderingLabelJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkRenderingLabelJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkRenderingMatplotlibJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkRenderingMatplotlibJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkRenderingParallelJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkRenderingParallelJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkRenderingParallelLICJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkRenderingParallelLICJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkRenderingSceneGraphJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkRenderingSceneGraphJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkRenderingPythonTkWidgets" references the file
"/usr/lib/arm-linux-gnueabihf/libvtkRenderingPythonTkWidgets.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkRenderingVolumeOpenGL2Java" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkRenderingVolumeOpenGL2Java.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkRenderingVolumeAMRJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkRenderingVolumeAMRJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkTestingRenderingJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkTestingRenderingJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkViewsContext2DJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkViewsContext2DJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkViewsInfovisJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkViewsInfovisJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkViewsGeovisJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkViewsGeovisJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtk" references the file
"/usr/bin/vtk"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "pvtk" references the file
"/usr/bin/pvtk"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkLocalExampleJava" references the file
"/usr/lib/arm-linux-gnueabihf/jni/libvtkLocalExampleJava.so"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/cmake/vtk-7.1/VTKTargets.cmake"
but not all the files it references.
-- Found CURL: /usr/lib/arm-linux-gnueabihf/libcurl.so (found version "7.67.0")
-- Checking for module 'libkim-api>=2.0'
-- Found libkim-api, version 2.1.3-git
-- Found KIM-API: kim-api (found suitable version "2.1.3", minimum required is "2.1")
-- Looking for C++ include cmath
-- Looking for C++ include cmath - found
-- HDF5: Using hdf5 compiler wrapper to determine C configuration
-- Found HDF5: /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so;/usr/lib/arm-linux-gnueabihf/libpthread.so;/usr/lib/arm-linux-gnueabihf/libsz.so;/usr/lib/arm-linux-gnueabihf/libz.so;/usr/lib/arm-linux-gnueabihf/libdl.so;/usr/lib/arm-linux-gnueabihf/libm.so (found version "1.10.4")
-- Looking for CL_VERSION_2_2
-- Looking for CL_VERSION_2_2 - found
-- Found OpenCL: /usr/lib/arm-linux-gnueabihf/libOpenCL.so (found version "2.2")
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/atom_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/beck_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/born_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/born_coul_long_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/born_coul_long_cs_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/born_coul_wolf_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/born_coul_wolf_cs_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/buck_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/buck_coul_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/buck_coul_long_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/charmm_long_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/colloid_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/coul_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/coul_debye_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/coul_dsf_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/coul_long_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/coul_long_cs_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/device_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/dipole_lj_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/dipole_lj_sf_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/dipole_long_lj_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/dpd_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/eam_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/ellipsoid_nbor_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/gauss_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/lj_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/lj96_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/lj_class2_long_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/lj_coul_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/lj_coul_debye_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/lj_coul_long_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/lj_coul_msm_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/lj_cubic_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/lj_dsf_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/lj_expand_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/lj_expand_coul_long_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/lj_gromacs_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/lj_sdk_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/lj_sdk_long_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/mie_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/morse_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/neighbor_cpu_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/neighbor_gpu_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/pppm_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/soft_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/sw_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/table_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/ufm_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/vashishta_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/yukawa_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/yukawa_colloid_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/zbl_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/gayberne_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/gayberne_lj_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/re_squared_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/re_squared_lj_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/tersoff_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/tersoff_zbl_cl.h...
Creating /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu/tersoff_mod_cl.h...
-- Generating style_angle.h...
-- Generating style_atom.h...
-- Generating style_body.h...
-- Generating style_bond.h...
-- Generating style_command.h...
-- Generating style_compute.h...
-- Generating style_dihedral.h...
-- Generating style_dump.h...
-- Generating style_fix.h...
-- Generating style_improper.h...
-- Generating style_integrate.h...
-- Generating style_kspace.h...
-- Generating style_minimize.h...
-- Generating style_nbin.h...
-- Generating style_npair.h...
-- Generating style_nstencil.h...
-- Generating style_ntopo.h...
-- Generating style_pair.h...
-- Generating style_reader.h...
-- Generating style_region.h...
-- Generating packages_angle.h...
-- Generating packages_atom.h...
-- Generating packages_body.h...
-- Generating packages_bond.h...
-- Generating packages_command.h...
-- Generating packages_compute.h...
-- Generating packages_dihedral.h...
-- Generating packages_dump.h...
-- Generating packages_fix.h...
-- Generating packages_improper.h...
-- Generating packages_integrate.h...
-- Generating packages_kspace.h...
-- Generating packages_minimize.h...
-- Generating packages_nbin.h...
-- Generating packages_npair.h...
-- Generating packages_nstencil.h...
-- Generating packages_ntopo.h...
-- Generating packages_pair.h...
-- Generating packages_reader.h...
-- Generating packages_region.h...
-- Generating lmpinstalledpkgs.h...
-- Found PythonInterp: /usr/bin/python3.8 (found version "3.8.1")
-- Building package: ASPHERE
-- Building package: BODY
-- Building package: CLASS2
-- Building package: COLLOID
-- Building package: COMPRESS
-- Building package: CORESHELL
-- Building package: DIPOLE
-- Building package: GRANULAR
-- Building package: KSPACE
-- Building package: MANYBODY
-- Building package: MC
-- Building package: MISC
-- Building package: MOLECULE
-- Building package: PERI
-- Building package: POEMS
-- Building package: QEQ
-- Building package: REPLICA
-- Building package: RIGID
-- Building package: SHOCK
-- Building package: SNAP
-- Building package: SRD
-- Building package: KIM
-- Building package: PYTHON
-- Building package: MPIIO
-- Building package: VORONOI
-- Building package: USER-ATC
-- Building package: USER-AWPMD
-- Building package: USER-BOCS
-- Building package: USER-CGDNA
-- Building package: USER-MESO
-- Building package: USER-CGSDK
-- Building package: USER-DIFFRACTION
-- Building package: USER-DPD
-- Building package: USER-DRUDE
-- Building package: USER-EFF
-- Building package: USER-FEP
-- Building package: USER-H5MD
-- Building package: USER-LB
-- Building package: USER-MANIFOLD
-- Building package: USER-MEAMC
-- Building package: USER-MGPT
-- Building package: USER-MISC
-- Building package: USER-MOFFF
-- Building package: USER-MOLFILE
-- Building package: USER-NETCDF
-- Building package: USER-PHONON
-- Building package: USER-QTB
-- Building package: USER-SMD
-- Building package: USER-SMTBQ
-- Building package: USER-SPH
-- Building package: USER-TALLY
-- Building package: USER-UEF
-- Building package: USER-VTK
-- Building package: USER-OMP
-- Building package: OPT
-- Building package: GPU
-- The following packages have been found:
* MPI
* LAPACK
* Threads
* BLAS
* JPEG
* PNG
* FFTW3
* PythonLibs
* VORO
* NetCDF
* Eigen3
* Qt5Core (required version >= 5.12.5)
* Qt5Gui (required version >= 5.12.5)
* Qt5Sql
* Qt5Widgets
* Qt5
* VTK
* CURL
* PkgConfig
* KIM-API (required version >= 2.1)
* ZLIB
* HDF5
* OpenCL
* PythonInterp
-- <<< Build configuration >>>
Build type None
Install path /usr
Compilers and Flags:
C++ Compiler /usr/bin/c++
Type GNU
Version 9.2.1
C++ Flags -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2
Defines LAMMPS_SMALLBIG;LAMMPS_MEMALIGN=64;LAMMPS_JPEG;LAMMPS_PNG;LAMMPS_GZIP;FFT_FFTW3;LMP_PYTHON;LMP_HAS_NETCDF;NC_64BIT_DATA=0x0020;vtkDomainsChemistry_AUTOINIT=1(vtkDomainsChemistryOpenGL2);vtkFiltersCore_AUTOINIT=1(vtkFiltersParallelDIY2);vtkFiltersFlowPaths_AUTOINIT=1(vtkFiltersParallelFlowPaths);vtkIOExodus_AUTOINIT=1(vtkIOParallelExodus);vtkIOGeometry_AUTOINIT=1(vtkIOMPIParallel);vtkIOImage_AUTOINIT=1(vtkIOMPIImage);vtkIOParallel_AUTOINIT=1(vtkIOMPIParallel);vtkIOSQL_AUTOINIT=2(vtkIOMySQL,vtkIOPostgreSQL);vtkRenderingContext2D_AUTOINIT=1(vtkRenderingContextOpenGL2);vtkRenderingCore_AUTOINIT=3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2);vtkRenderingFreeType_AUTOINIT=2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib);vtkRenderingLICOpenGL2_AUTOINIT=1(vtkRenderingParallelLIC);vtkRenderingOpenGL2_AUTOINIT=1(vtkRenderingGL2PSOpenGL2);vtkRenderingVolume_AUTOINIT=1(vtkRenderingVolumeOpenGL2);LAMMPS_VTK;LMP_KIM_CURL;LMP_MPIIO;LMP_USER_OMP
-- C Compiler /usr/bin/cc
Type GNU
Version 9.2.1
C Flags -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2
-- Linker flags:
Executable -Wl,-z,relro
-- Shared libraries -Wl,-z,relro
-- Link libraries: /usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi_cxx.so;/usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi.so;/usr/lib/arm-linux-gnueabihf/libjpeg.so;/usr/lib/arm-linux-gnueabihf/libpng.so;/usr/lib/arm-linux-gnueabihf/libz.so;/usr/lib/arm-linux-gnueabihf/libfftw3.so;/usr/lib/arm-linux-gnueabihf/libpython3.8.so;/usr/lib/arm-linux-gnueabihf/libvoro++.so;molfile;/usr/lib/arm-linux-gnueabihf/libnetcdf.so;vtkChartsCore;vtkCommonColor;vtkCommonCore;vtksys;vtkCommonDataModel;vtkCommonMath;vtkCommonMisc;vtkCommonSystem;vtkCommonTransforms;vtkCommonExecutionModel;vtkFiltersGeneral;vtkCommonComputationalGeometry;vtkFiltersCore;vtkInfovisCore;vtkFiltersExtraction;vtkFiltersStatistics;vtkImagingFourier;vtkImagingCore;vtkalglib;vtkRenderingContext2D;vtkRenderingCore;vtkFiltersGeometry;vtkFiltersSources;vtkRenderingFreeType;/usr/lib/arm-linux-gnueabihf/libfreetype.so;vtkDICOMParser;vtkDomainsChemistry;vtkIOLegacy;vtkIOCore;vtkIOXMLParser;/usr/lib/arm-linux-gnueabihf/libexpat.so;vtkDomainsChemistryOpenGL2;vtkRenderingOpenGL2;vtkIOImage;vtkmetaio;/usr/lib/arm-linux-gnueabihf/libtiff.so;vtkFiltersAMR;vtkIOXML;vtkParallelCore;vtkFiltersFlowPaths;vtkFiltersGeneric;vtkFiltersHybrid;vtkImagingSources;vtkFiltersHyperTree;vtkFiltersImaging;vtkImagingGeneral;vtkFiltersModeling;vtkFiltersParallel;vtkFiltersParallelDIY2;vtkParallelMPI;vtkFiltersParallelFlowPaths;vtkFiltersParallelGeometry;vtkFiltersParallelImaging;vtkFiltersParallelMPI;vtkFiltersParallelStatistics;vtkFiltersPoints;vtkFiltersProgrammable;vtkFiltersPython;/usr/lib/arm-linux-gnueabihf/libpython3.7m.so;vtkWrappingPythonCore;vtkWrappingTools;vtkFiltersReebGraph;vtkFiltersSMP;vtkFiltersSelection;vtkFiltersTexture;vtkFiltersVerdict;verdict;vtkGUISupportQt;vtkInteractionStyle;vtkGUISupportQtSQL;vtkIOSQL;sqlite3;vtkGeovisCore;vtkInfovisLayout;vtkImagingHybrid;vtkInteractionWidgets;vtkImagingColor;vtkRenderingAnnotation;vtkRenderingVolume;vtkViewsCore;vtkproj4;vtkIOAMR;/usr/lib/arm-linux-gnueabihf/hdf5/openmpi/libhdf5.so;/usr/lib/arm-linux-gnueabihf/libsz.so;/usr/lib/arm-linux-gnueabihf/libdl.so;/usr/lib/arm-linux-gnueabihf/libm.so;/usr/lib/arm-linux-gnueabihf/hdf5/openmpi/libhdf5_hl.so;vtkIOEnSight;vtkIOExodus;vtkexoIIc;/usr/lib/arm-linux-gnueabihf/libnetcdf_c++.so;vtkIOExport;vtkRenderingGL2PSOpenGL2;/usr/lib/arm-linux-gnueabihf/libgl2ps.so;vtkIOFFMPEG;vtkIOMovie;/usr/lib/arm-linux-gnueabihf/libtheoraenc.so;/usr/lib/arm-linux-gnueabihf/libtheoradec.so;/usr/lib/arm-linux-gnueabihf/libogg.so;vtkIOGDAL;vtkIOGeoJSON;/usr/lib/arm-linux-gnueabihf/libjsoncpp.so;vtkIOGeometry;vtkIOImport;vtkIOInfovis;/usr/lib/arm-linux-gnueabihf/libxml2.so;vtkIOLSDyna;vtkIOMINC;vtkIOMPIImage;vtkIOMPIParallel;vtkIOParallel;vtkIONetCDF;vtkIOMySQL;vtkIOODBC;vtkIOPLY;vtkIOParallelExodus;vtkIOParallelLSDyna;vtkIOParallelNetCDF;vtkIOParallelXML;vtkIOPostgreSQL;vtkIOTecplotTable;vtkIOVPIC;VPIC;vtkIOVideo;vtkIOXdmf2;vtkxdmf2;vtkImagingMath;vtkImagingMorphological;vtkImagingStatistics;vtkImagingStencil;vtkInfovisBoostGraphAlgorithms;vtkInteractionImage;vtkLocalExample;vtkParallelMPI4Py;vtkPythonInterpreter;vtkRenderingContextOpenGL2;vtkRenderingExternal;vtkRenderingFreeTypeFontConfig;vtkRenderingImage;vtkRenderingLICOpenGL2;vtkRenderingLOD;vtkRenderingLabel;vtkRenderingMatplotlib;vtkRenderingParallel;vtkRenderingParallelLIC;vtkRenderingSceneGraph;vtkRenderingVolumeAMR;vtkRenderingVolumeOpenGL2;vtkTestingGenericBridge;vtkTestingIOSQL;vtkTestingRendering;vtkViewsContext2D;vtkViewsGeovis;vtkViewsInfovis;vtkWrappingJava;/usr/lib/arm-linux-gnueabihf/libcurl.so;-Wl,-rpath,/usr/lib/arm-linux-gnueabihf;-lkim-api;m;poems;atc;awpmd;h5md;gpu
-- Using mpi with headers in /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi;/usr/lib/arm-linux-gnueabihf/openmpi/include and /usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi_cxx.so;/usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi.so
-- GPU Api: OPENCL
-- OCL Tune: GENERIC
-- GPU Precision: MIXED
-- Using FFTW3 as primary FFT library
-- Using double precision FFTs
-- Configuring done
-- Generating done
CMake Warning:
Manually-specified variables were not used by the project:
CMAKE_EXPORT_NO_PACKAGE_REGISTRY
-- Build files have been written to: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build
make[1]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1'
dh_auto_build -a -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-20191120\+dfsg1/debian/build
cd debian/build && make -j4 "INSTALL=install --strip-program=true"
make[1]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
/usr/bin/cmake -S/<<BUILDDIR>>/lammps-20191120+dfsg1/cmake -B/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/CMakeFiles /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[2]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
make -f CMakeFiles/h5md.dir/build.make CMakeFiles/h5md.dir/depend
make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/depend
make -f CMakeFiles/awpmd.dir/build.make CMakeFiles/awpmd.dir/depend
make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
cd /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/lammps-20191120+dfsg1/cmake /<<BUILDDIR>>/lammps-20191120+dfsg1/cmake /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/CMakeFiles/h5md.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
cd /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/lammps-20191120+dfsg1/cmake /<<BUILDDIR>>/lammps-20191120+dfsg1/cmake /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/CMakeFiles/awpmd.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
cd /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/lammps-20191120+dfsg1/cmake /<<BUILDDIR>>/lammps-20191120+dfsg1/cmake /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/CMakeFiles/atc.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
cd /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/lammps-20191120+dfsg1/cmake /<<BUILDDIR>>/lammps-20191120+dfsg1/cmake /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/CMakeFiles/gpu.dir/DependInfo.cmake --color=
Scanning dependencies of target awpmd
make[3]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
make -f CMakeFiles/awpmd.dir/build.make CMakeFiles/awpmd.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
Scanning dependencies of target h5md
make[3]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
make -f CMakeFiles/h5md.dir/build.make CMakeFiles/h5md.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
[ 0%] Building CXX object CMakeFiles/awpmd.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/src/logexc.cpp.o
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/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/awpmd.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact/TCP/wpmd.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact/TCP/wpmd.cpp
Scanning dependencies of target poems
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/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/body.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/body.cpp
Scanning dependencies of target atc
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[ 1%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Coupling.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Coupling.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Coupling.cpp
[ 1%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/body23joint.cpp.o
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[ 2%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_answer.cpp.o
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[ 2%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/colmatmap.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/colmatmap.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/colmatmap.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_answer.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_answer.cpp:16:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 2%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/colmatrix.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/colmatrix.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/colmatrix.cpp
[ 2%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.cpp
[ 2%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/eulerparameters.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/eulerparameters.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/eulerparameters.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.cpp:16:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 2%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/fastmatrixops.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/fastmatrixops.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/fastmatrixops.cpp
[ 2%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.cpp
[ 2%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/fixedpoint.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/fixedpoint.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/fixedpoint.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.cpp:16:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 2%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/freebodyjoint.cpp.o
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[ 2%] Building CXX object CMakeFiles/awpmd.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact/TCP/wpmd_split.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/awpmd.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact/TCP/wpmd_split.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact/TCP/wpmd_split.cpp
[ 2%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/inertialframe.cpp.o
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[ 3%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/joint.cpp.o
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[ 3%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/mat3x3.cpp.o
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[ 3%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.cpp
[ 3%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/mat4x4.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/mat4x4.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/mat4x4.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.cpp:17:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 3%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/mat6x6.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/mat6x6.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/mat6x6.cpp
[ 3%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/matrix.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/matrix.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/matrix.cpp
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact/TCP/wpmd.h:145,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact/TCP/wpmd_split.h:65,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact/TCP/wpmd_split.cpp:1:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Vector_Nt<double, 2>&}; _Tp = Vector_Nt<double, 2>; _Alloc = std::allocator<Vector_Nt<double, 2> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Vector_Nt<double, 2> >::iterator' {aka '__gnu_cxx::__normal_iterator<Vector_Nt<double, 2>*, std::vector<Vector_Nt<double, 2> > >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
[ 3%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/matrixfun.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/matrixfun.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/matrixfun.cpp
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Coupling.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Coupling.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Coupling.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Coupling.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Coupling.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Coupling.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Coupling.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Coupling.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 3%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/mixedjoint.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/mixedjoint.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/mixedjoint.cpp
[ 3%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_dipole.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_dipole.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_dipole.cpp
[ 3%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/norm.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/norm.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/norm.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_dipole.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_dipole.cpp:17:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {WavePacket}; _Tp = WavePacket; _Alloc = std::allocator<WavePacket>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<WavePacket>::iterator' {aka '__gnu_cxx::__normal_iterator<WavePacket*, std::vector<WavePacket> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'int AWPMD_split::add_split(Vector_3&, Vector_3&, double&, double&, Vector_2&, double, double, int)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<WavePacket*, std::vector<WavePacket> >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact/TCP/wpmd.h:145,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact/TCP/wpmd_split.h:65,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact/TCP/wpmd_split.cpp:1:
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Vector_Nt<double, 2>*, std::vector<Vector_Nt<double, 2> > >' changed in GCC 7.1
1195 | _M_realloc_insert(end(), __x);
| ^~~~~~~~~~~~~~~~~
[ 3%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/onbody.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/onbody.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/onbody.cpp
[ 3%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/onfunctions.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/onfunctions.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/onfunctions.cpp
[ 3%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/onsolver.cpp.o
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[ 3%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/particle.cpp.o
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[ 3%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_dpd.cpp.o
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[ 3%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/poemsobject.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/poemsobject.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/poemsobject.cpp
[ 3%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/poemstreenode.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/poemstreenode.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/poemstreenode.cpp
[ 3%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/point.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/point.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/point.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_dpd.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_dpd.cpp:17:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 4%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/prismaticjoint.cpp.o
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[ 4%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/revolutejoint.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/revolutejoint.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/revolutejoint.cpp
[ 4%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_CouplingEnergy.cpp.o
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[ 4%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/rigidbody.cpp.o
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[ 4%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/rowmatrix.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/rowmatrix.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/rowmatrix.cpp
[ 4%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_ellipsoid.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_ellipsoid.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_ellipsoid.cpp
[ 4%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/solver.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/solver.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/solver.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_ellipsoid.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_ellipsoid.cpp:16:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 4%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/sphericaljoint.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/sphericaljoint.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/sphericaljoint.cpp
[ 4%] Linking CXX static library libawpmd.a
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/usr/bin/ar qc libawpmd.a CMakeFiles/awpmd.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/src/logexc.cpp.o CMakeFiles/awpmd.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact/TCP/wpmd.cpp.o CMakeFiles/awpmd.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact/TCP/wpmd_split.cpp.o
/usr/bin/ranlib libawpmd.a
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make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/depend
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cd /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/lammps-20191120+dfsg1/cmake /<<BUILDDIR>>/lammps-20191120+dfsg1/cmake /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/CMakeFiles/ocl_get_devices.dir/DependInfo.cmake --color=
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[ 4%] Building CXX object CMakeFiles/ocl_get_devices.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ucl_get_devices.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DUCL_OPENCL -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIE -o CMakeFiles/ocl_get_devices.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ucl_get_devices.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ucl_get_devices.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_device.h:35,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ucl_get_devices.cpp:25:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 4%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/system.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/system.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/system.cpp
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_device.h:28,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ucl_get_devices.cpp:25:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ucl_opencl::OCLProperties&}; _Tp = ucl_opencl::OCLProperties; _Alloc = std::allocator<ucl_opencl::OCLProperties>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ucl_opencl::OCLProperties>::iterator' {aka '__gnu_cxx::__normal_iterator<ucl_opencl::OCLProperties*, std::vector<ucl_opencl::OCLProperties> >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_device.h:28,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ucl_get_devices.cpp:25:
/usr/include/c++/9/bits/stl_vector.h: In member function 'void ucl_opencl::UCL_Device::add_properties(cl_device_id)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ucl_opencl::OCLProperties*, std::vector<ucl_opencl::OCLProperties> >' changed in GCC 7.1
1195 | _M_realloc_insert(end(), __x);
| ^~~~~~~~~~~~~~~~~
[ 4%] Linking CXX executable ocl_get_devices
/usr/bin/cmake -E cmake_link_script CMakeFiles/ocl_get_devices.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -rdynamic CMakeFiles/ocl_get_devices.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ucl_get_devices.cpp.o -o ocl_get_devices -lOpenCL
make[3]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
[ 4%] Built target ocl_get_devices
[ 4%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/vect3.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/vect3.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/vect3.cpp
[ 4%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_CouplingMass.cpp.o
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[ 4%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/vect4.cpp.o
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[ 4%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/vect6.cpp.o
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[ 4%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_three.cpp.o
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[ 4%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/virtualcolmatrix.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/virtualcolmatrix.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/virtualcolmatrix.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_three.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_three.cpp:16:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 4%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/virtualmatrix.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/virtualmatrix.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/virtualmatrix.cpp
[ 4%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/virtualrowmatrix.cpp.o
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[ 4%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_CouplingMomentum.cpp.o
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[ 4%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems/workspace.cpp.o
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/usr/bin/ranlib libpoems.a
make[3]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
[ 5%] Built target poems
[ 5%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_beck_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_beck_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_beck_ext.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_beck.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_beck.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_beck.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_beck_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 5%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_CouplingMomentumEnergy.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_CouplingMomentumEnergy.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_CouplingMomentumEnergy.cpp
[ 5%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born.cpp
[ 5%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Coupling.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_CouplingMomentum.h:7,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_CouplingMomentum.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Coupling.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_CouplingMomentum.h:7,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_CouplingMomentum.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Coupling.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_CouplingMomentum.h:7,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_CouplingMomentum.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 5%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_long.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_long.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_long.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_long.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_long.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 5%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_long_cs.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_long_cs.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_long_cs.cpp
[ 5%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Transfer.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Transfer.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Transfer.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_long.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_long_cs.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_long_cs.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 5%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_long_cs_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_long_cs_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_long_cs_ext.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_long.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_long_cs.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_long_cs_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Coupling.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_CouplingMomentumEnergy.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_CouplingMomentumEnergy.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Coupling.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_CouplingMomentumEnergy.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_CouplingMomentumEnergy.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Coupling.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_CouplingMomentumEnergy.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_CouplingMomentumEnergy.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 5%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_long_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_long_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_long_ext.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_long.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_long_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 6%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_wolf.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_wolf.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_wolf.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_wolf.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_wolf.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 6%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_wolf_cs.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_wolf_cs.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_wolf_cs.cpp
[ 6%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TransferKernel.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TransferKernel.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TransferKernel.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_wolf.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_wolf_cs.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_wolf_cs.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 6%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_wolf_cs_ext.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_wolf.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_wolf_cs.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_wolf_cs_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 6%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_wolf_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_wolf_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_wolf_ext.cpp
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_wolf.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_coul_wolf_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 6%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_ext.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_born_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Transfer.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TransferKernel.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TransferKernel.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void ATC_matrix::SparseMatrix<T>::add(ATC_matrix::INDEX, ATC_matrix::INDEX, T) [with T = double]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Transfer.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TransferKernel.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TransferKernel.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Transfer.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TransferKernel.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TransferKernel.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Transfer.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TransferKernel.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TransferKernel.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 6%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_buck.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_buck.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_buck.cpp
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Transfer.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Transfer.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Transfer.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Transfer.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Transfer.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Transfer.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 6%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TransferPartitionOfUnity.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TransferPartitionOfUnity.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TransferPartitionOfUnity.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_buck.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_buck.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 6%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_buck_coul.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_buck_coul.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_buck_coul.cpp
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Transfer.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Transfer.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void ATC_matrix::SparseMatrix<T>::set(ATC_matrix::INDEX, ATC_matrix::INDEX, T) [with T = double]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_buck_coul.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_buck_coul.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 6%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomToMoleculeTransfer.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomToMoleculeTransfer.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomToMoleculeTransfer.cpp
[ 6%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_buck_coul_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_buck_coul_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_buck_coul_ext.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_buck_coul.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_buck_coul_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 6%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_buck_coul_long.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_buck_coul_long.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_buck_coul_long.cpp
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Transfer.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TransferPartitionOfUnity.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TransferPartitionOfUnity.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Transfer.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TransferPartitionOfUnity.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TransferPartitionOfUnity.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Method.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_Transfer.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TransferPartitionOfUnity.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TransferPartitionOfUnity.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 6%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomicRegulator.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomicRegulator.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomicRegulator.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_buck_coul_long.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_buck_coul_long.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 6%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/BodyForce.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/BodyForce.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/BodyForce.cpp
[ 6%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_buck_coul_long_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_buck_coul_long_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_buck_coul_long_ext.cpp
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LammpsInterface.h:25,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantity.h:7,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantityLibrary.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TransferOperator.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomToMoleculeTransfer.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomToMoleculeTransfer.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LammpsInterface.h:25,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantity.h:7,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantityLibrary.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TransferOperator.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomToMoleculeTransfer.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomToMoleculeTransfer.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LammpsInterface.h:25,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantity.h:7,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantityLibrary.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TransferOperator.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomToMoleculeTransfer.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomToMoleculeTransfer.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_buck_coul_long.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_buck_coul_long_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 6%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/CBLattice.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/CBLattice.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/CBLattice.cpp
[ 6%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_buck_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_buck_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_buck_ext.cpp
[ 6%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/CauchyBorn.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/CauchyBorn.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/CauchyBorn.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_buck.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_buck_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 6%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_charmm_long.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_charmm_long.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_charmm_long.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_charmm_long.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_charmm_long.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/CBLattice.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/CBLattice.cpp:1:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ^~~~~~~~~~~~~~~~~
[ 6%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_charmm_long_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_charmm_long_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_charmm_long_ext.cpp
[ 6%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_colloid.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_colloid.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_colloid.cpp
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomicRegulator.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomicRegulator.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_charmm_long.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_charmm_long_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_colloid.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_colloid.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomicRegulator.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomicRegulator.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomicRegulator.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomicRegulator.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomicRegulator.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomicRegulator.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 7%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/CbPotential.cpp.o
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[ 8%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_colloid_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_colloid_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_colloid_ext.cpp
[ 8%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_colloid.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_colloid_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 8%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ChargeRegulator.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ChargeRegulator.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ChargeRegulator.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 8%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ConcentrationRegulator.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ConcentrationRegulator.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ConcentrationRegulator.cpp
[ 8%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_debye.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_debye.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_debye.cpp
[ 8%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ElasticTimeIntegrator.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ElasticTimeIntegrator.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ElasticTimeIntegrator.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_debye.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_debye.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 8%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_debye_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_debye_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_debye_ext.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_debye.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_debye_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 8%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_dsf.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_dsf.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_dsf.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_dsf.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_dsf.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 8%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_dsf_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_dsf_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_dsf_ext.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_dsf.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_dsf_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 8%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ElectronChargeDensity.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ElectronChargeDensity.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ElectronChargeDensity.cpp
[ 8%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_ext.cpp
In file included from /usr/include/c++/9/set:60,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomicRegulator.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ChargeRegulator.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ChargeRegulator.cpp:1:
/usr/include/c++/9/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const int&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> >; _KeyOfValue = std::_Select1st<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> >, std::_Select1st<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > >, std::less<int>, std::allocator<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > >'} changed in GCC 7.1
2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Matrix.h:3,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/DenseMatrix.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixLibrary.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TimeIntegrator.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ElasticTimeIntegrator.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ElasticTimeIntegrator.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Matrix.h:3,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/DenseMatrix.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixLibrary.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TimeIntegrator.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ElasticTimeIntegrator.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ElasticTimeIntegrator.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Matrix.h:3,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/DenseMatrix.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixLibrary.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TimeIntegrator.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ElasticTimeIntegrator.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ElasticTimeIntegrator.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomicRegulator.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ChargeRegulator.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ChargeRegulator.cpp:1:
/usr/include/c++/9/bits/stl_map.h: In member function 'virtual void ATC::ChargeRegulatorMethodEffectiveCharge::initialize()':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> >, std::_Select1st<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > >, std::less<int>, std::allocator<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > >'} changed in GCC 7.1
499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomicRegulator.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ChargeRegulator.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ChargeRegulator.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomicRegulator.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ChargeRegulator.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ChargeRegulator.cpp:1:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomicRegulator.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ChargeRegulator.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ChargeRegulator.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 8%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_long.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_long.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_long.cpp
[ 8%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ElectronDragPower.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ElectronDragPower.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ElectronDragPower.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_long.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_long.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 8%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ElectronFlux.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ElectronFlux.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ElectronFlux.cpp
[ 8%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_long_cs.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_long_cs.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_long_cs.cpp
[ 8%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ElectronHeatCapacity.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ElectronHeatCapacity.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ElectronHeatCapacity.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_long.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_long_cs.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_long_cs.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 8%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ElectronHeatFlux.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ElectronHeatFlux.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ElectronHeatFlux.cpp
[ 8%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_long_cs_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_long_cs_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_long_cs_ext.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_long.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_long_cs.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_long_cs_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 8%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_long_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_long_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_long_ext.cpp
[ 8%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ElectronPhononExchange.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ElectronPhononExchange.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ElectronPhononExchange.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_long.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_coul_long_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 8%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModel.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModel.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModel.cpp
[ 8%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.cpp:16:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 8%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelDriftDiffusion.cpp
[ 8%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelElectrostatic.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelElectrostatic.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelElectrostatic.cpp
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_device.h:28,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:28,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.cpp:16:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ucl_opencl::OCLProperties&}; _Tp = ucl_opencl::OCLProperties; _Alloc = std::allocator<ucl_opencl::OCLProperties>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ucl_opencl::OCLProperties>::iterator' {aka '__gnu_cxx::__normal_iterator<ucl_opencl::OCLProperties*, std::vector<ucl_opencl::OCLProperties> >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_device.h:28,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:28,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.cpp:16:
/usr/include/c++/9/bits/stl_vector.h: In member function 'void ucl_opencl::UCL_Device::add_properties(cl_device_id)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ucl_opencl::OCLProperties*, std::vector<ucl_opencl::OCLProperties> >' changed in GCC 7.1
1195 | _M_realloc_insert(end(), __x);
| ^~~~~~~~~~~~~~~~~
[ 8%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelTwoTemperature.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelTwoTemperature.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelTwoTemperature.cpp
[ 8%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dipole_lj.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dipole_lj.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dipole_lj.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_dipole.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dipole_lj.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dipole_lj.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModel.h:8,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelTwoTemperature.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelDriftDiffusion.h:8,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelDriftDiffusion.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModel.h:8,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelTwoTemperature.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelDriftDiffusion.h:8,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelDriftDiffusion.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModel.h:8,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelTwoTemperature.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelDriftDiffusion.h:8,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelDriftDiffusion.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 8%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dipole_lj_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dipole_lj_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dipole_lj_ext.cpp
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelDriftDiffusion.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelDriftDiffusion.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_dipole.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dipole_lj.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dipole_lj_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 8%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dipole_lj_sf.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dipole_lj_sf.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dipole_lj_sf.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_dipole.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dipole_lj_sf.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dipole_lj_sf.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModel.h:8,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelTwoTemperature.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelTwoTemperature.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModel.h:8,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelTwoTemperature.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelTwoTemperature.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModel.h:8,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelTwoTemperature.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelTwoTemperature.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 8%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FE_Element.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FE_Element.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FE_Element.cpp
In file included from /usr/include/c++/9/map:60,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModel.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelElectrostatic.h:7,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelElectrostatic.cpp:2:
/usr/include/c++/9/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const int&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> >; _KeyOfValue = std::_Select1st<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> >, std::_Select1st<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > >, std::less<int>, std::allocator<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > >'} changed in GCC 7.1
2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 9%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dipole_lj_sf_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dipole_lj_sf_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dipole_lj_sf_ext.cpp
In file included from /usr/include/c++/9/map:61,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModel.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelElectrostatic.h:7,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelElectrostatic.cpp:2:
/usr/include/c++/9/bits/stl_map.h: In member function 'void ATC::ExtrinsicModelElectrostatic::add_charged_surface(const string&, double)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> >, std::_Select1st<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > >, std::less<int>, std::allocator<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > >'} changed in GCC 7.1
499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 9%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dipole_long_lj.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dipole_long_lj.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dipole_long_lj.cpp
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModel.h:8,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelElectrostatic.h:7,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelElectrostatic.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModel.h:8,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelElectrostatic.h:7,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelElectrostatic.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModel.h:8,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelElectrostatic.h:7,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ExtrinsicModelElectrostatic.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_dipole.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dipole_lj_sf.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dipole_lj_sf_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_dipole.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dipole_long_lj.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dipole_long_lj.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 10%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FE_Engine.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FE_Engine.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FE_Engine.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dipole_long_lj_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dipole_long_lj_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dipole_long_lj_ext.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_dipole.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dipole_long_lj.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dipole_long_lj_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dpd.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dpd.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dpd.cpp
[ 10%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FE_Interpolate.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FE_Interpolate.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FE_Interpolate.cpp
[ 10%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FE_Mesh.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FE_Mesh.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FE_Mesh.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_dpd.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dpd.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dpd.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dpd_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dpd_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dpd_ext.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_dpd.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dpd.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_dpd_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_eam.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_eam.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_eam.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_eam.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_eam.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FE_Element.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FE_Mesh.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ^~~~~~~~~~~~~~~~~
[ 10%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_eam_alloy_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_eam_alloy_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_eam_alloy_ext.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_eam.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_eam_alloy_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 10%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FieldEulerIntegrator.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FieldEulerIntegrator.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FieldEulerIntegrator.cpp
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FE_Engine.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FE_Engine.cpp:1:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
[ 10%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_eam_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_eam_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_eam_ext.cpp
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FE_Engine.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FE_Engine.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_eam.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_eam_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FE_Engine.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FE_Engine.cpp:1:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FE_Engine.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FE_Engine.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 10%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_eam_fs_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_eam_fs_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_eam_fs_ext.cpp
In file included from /usr/include/c++/9/vector:67,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FE_Element.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FE_Mesh.cpp:2:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void ATC::FE_Rectangular3DMesh::partition_mesh()':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1195 | _M_realloc_insert(end(), __x);
| ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1195 | _M_realloc_insert(end(), __x);
| ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1195 | _M_realloc_insert(end(), __x);
| ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void ATC::FE_Uniform3DMesh::partition_mesh()':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1195 | _M_realloc_insert(end(), __x);
| ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1195 | _M_realloc_insert(end(), __x);
| ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1195 | _M_realloc_insert(end(), __x);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_eam.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_eam_fs_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_gauss.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_gauss.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_gauss.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_gauss.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_gauss.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_gauss_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_gauss_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_gauss_ext.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_gayberne.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_gayberne.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_gayberne.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_gauss.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_gauss_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_ellipsoid.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_gayberne.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_gayberne.cpp:27:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:17,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array2D.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FieldEulerIntegrator.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FieldEulerIntegrator.cpp:1:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void ATC_matrix::SparseMatrix<T>::set(ATC_matrix::INDEX, ATC_matrix::INDEX, T) [with T = double]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array2D.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FieldEulerIntegrator.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FieldEulerIntegrator.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array2D.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FieldEulerIntegrator.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FieldEulerIntegrator.cpp:1:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array2D.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FieldEulerIntegrator.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FieldEulerIntegrator.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 10%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FieldManager.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FieldManager.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FieldManager.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_gayberne_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_gayberne_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_gayberne_ext.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj.cpp
[ 10%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Function.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Function.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Function.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_ellipsoid.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_gayberne.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_gayberne_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj96.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj96.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj96.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj96.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj96.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj96_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj96_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj96_ext.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj96.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj96_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_class2_long.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_class2_long.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_class2_long.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_class2_long_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_class2_long_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_class2_long_ext.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul.cpp.o
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In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_class2_long.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_class2_long.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_class2_long.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_class2_long_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FieldManager.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FieldManager.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FieldManager.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FieldManager.cpp:1:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
[ 11%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FundamentalAtomicQuantity.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FundamentalAtomicQuantity.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FundamentalAtomicQuantity.cpp
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FieldManager.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FieldManager.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 11%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/GhostManager.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/GhostManager.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/GhostManager.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_debye.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_debye.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_debye.cpp
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FieldManager.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/FieldManager.cpp:1:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_debye.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_debye.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_debye_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_debye_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_debye_ext.cpp
[ 11%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ImplicitSolveOperator.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ImplicitSolveOperator.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ImplicitSolveOperator.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_debye.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_debye_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_ext.cpp
[ 11%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/InterscaleOperators.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/InterscaleOperators.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/InterscaleOperators.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_long.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_long.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_long.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_long.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_long.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:17,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Matrix.h:3,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/DenseMatrix.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixLibrary.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/GhostManager.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/GhostManager.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ^~~~~~~~~~~~~~~~~
[ 11%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_long_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_long_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_long_ext.cpp
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Matrix.h:3,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/DenseMatrix.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixLibrary.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/GhostManager.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/GhostManager.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(std::pair<int, double>, std::pair<int, double>)>]':
/usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
78 | __move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b,
| ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(std::pair<int, double>, std::pair<int, double>)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(std::pair<int, double>, std::pair<int, double>)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Matrix.h:3,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/DenseMatrix.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixLibrary.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/GhostManager.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/GhostManager.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >; _Distance = int; _Tp = std::pair<int, double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(std::pair<int, double>, std::pair<int, double>)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Matrix.h:3,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/DenseMatrix.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixLibrary.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/GhostManager.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/GhostManager.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(std::pair<int, double>, std::pair<int, double>)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1920:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
1920 | std::__move_median_to_first(__first, __first + 1, __mid, __last - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1921 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1920:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'int ATC::GhostModifierDampedHarmonicLayers::find_layers()':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_long.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_long_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_msm.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_msm.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_msm.cpp
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array2D.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ImplicitSolveOperator.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ImplicitSolveOperator.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array2D.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ImplicitSolveOperator.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ImplicitSolveOperator.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array2D.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ImplicitSolveOperator.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ImplicitSolveOperator.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 11%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_msm_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_msm_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_msm_ext.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_msm.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_msm.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_msm.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_coul_msm_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_cubic.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_cubic.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_cubic.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_cubic_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_cubic_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_cubic_ext.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_dsf.cpp.o
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In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_cubic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_cubic.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_cubic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_cubic_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_dsf.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_dsf.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_dsf_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_dsf_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_dsf_ext.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_expand.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_expand.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_expand.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_dsf.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_dsf_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_expand_coul_long.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_expand_coul_long.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_expand_coul_long.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_expand.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_expand.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_expand_coul_long_ext.cpp
[ 12%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KD_Tree.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KD_Tree.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KD_Tree.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_expand_coul_long.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_expand_coul_long.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_expand_coul_long.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_expand_coul_long_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_expand_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_expand_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_expand_ext.cpp
[ 12%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KernelFunction.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KernelFunction.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KernelFunction.cpp
[ 12%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KinetoThermostat.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KinetoThermostat.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KinetoThermostat.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_expand.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_expand_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:17,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array2D.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KD_Tree.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KD_Tree.cpp:1:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Node&}; _Tp = Node; _Alloc = std::allocator<Node>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Node>::iterator' {aka '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {Node}; _Tp = Node; _Alloc = std::allocator<Node>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Node>::iterator' {aka '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array2D.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KD_Tree.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KD_Tree.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function '_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Node*, std::vector<Node> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const Node>]':
/usr/include/c++/9/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
112 | __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last,
| ^~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Node*, std::vector<Node> >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(Node, Node)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Node*, std::vector<Node> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(Node, Node)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array2D.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KD_Tree.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KD_Tree.cpp:1:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Node*, std::vector<Node> >; _Distance = int; _Tp = Node; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(Node, Node)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array2D.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KD_Tree.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KD_Tree.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Node*, std::vector<Node> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(Node, Node)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In constructor 'KD_Tree::KD_Tree(std::vector<Node>*, std::vector<std::pair<int, std::vector<Node> > >*, int)':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
161 | return __find_if(__first, __last, __pred,
| ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
162 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:17,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array2D.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KD_Tree.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KD_Tree.cpp:1:
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
1195 | _M_realloc_insert(end(), __x);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array2D.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KD_Tree.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KD_Tree.cpp:1:
/usr/include/c++/9/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
161 | return __find_if(__first, __last, __pred,
| ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
162 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:17,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array2D.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KD_Tree.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KD_Tree.cpp:1:
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
1195 | _M_realloc_insert(end(), __x);
| ^~~~~~~~~~~~~~~~~
[ 12%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_ext.cpp
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:17,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array2D.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KD_Tree.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KD_Tree.cpp:1:
/usr/include/c++/9/bits/vector.tcc: In static member function 'static KD_Tree* KD_Tree::create_KD_tree(int, int, const DENS_MAT*, int, const ATC_matrix::Array2D<int>&)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:17,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array2D.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KD_Tree.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KD_Tree.cpp:1:
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
1195 | _M_realloc_insert(end(), __x);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_gromacs.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_gromacs.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_gromacs.cpp
[ 12%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Kinetostat.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Kinetostat.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Kinetostat.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_gromacs.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_gromacs.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_gromacs_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_gromacs_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_gromacs_ext.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_gromacs.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_gromacs_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 12%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LammpsInterface.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LammpsInterface.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LammpsInterface.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_sdk.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_sdk.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_sdk.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_sdk.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_sdk.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_sdk_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_sdk_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_sdk_ext.cpp
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomicRegulator.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KinetoThermostat.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KinetoThermostat.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomicRegulator.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KinetoThermostat.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KinetoThermostat.cpp:1:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomicRegulator.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KinetoThermostat.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/KinetoThermostat.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_sdk.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_sdk_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_sdk_long.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_sdk_long.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_sdk_long.cpp
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LammpsInterface.h:25,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LammpsInterface.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LammpsInterface.h:25,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LammpsInterface.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LammpsInterface.h:25,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LammpsInterface.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LammpsInterface.h:25,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LammpsInterface.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 12%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_sdk_long_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_sdk_long_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_sdk_long_ext.cpp
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_sdk_long.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_sdk_long.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_charge.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_sdk_long.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_lj_sdk_long_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 13%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LinearSolver.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LinearSolver.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LinearSolver.cpp
[ 13%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_mie.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_mie.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_mie.cpp
[ 13%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MPI_Wrappers.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MPI_Wrappers.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MPI_Wrappers.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_mie.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_mie.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_mie_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_mie_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_mie_ext.cpp
[ 13%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_morse.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_morse.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_morse.cpp
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomicRegulator.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Kinetostat.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Kinetostat.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomicRegulator.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Kinetostat.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Kinetostat.cpp:1:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomicRegulator.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Kinetostat.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Kinetostat.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_mie.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_mie_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_morse.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_morse.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LinearSolver.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LinearSolver.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ^~~~~~~~~~~~~~~~~
[ 13%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Material.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Material.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Material.cpp
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LinearSolver.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LinearSolver.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LinearSolver.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LinearSolver.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LinearSolver.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LinearSolver.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 14%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_morse_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_morse_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_morse_ext.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_morse.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_morse_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_neighbor.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_neighbor.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_neighbor.cpp
[ 14%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Matrix.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Matrix.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Matrix.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_neighbor.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_neighbor.cpp:18:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 14%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MeshReader.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MeshReader.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MeshReader.cpp
[ 14%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MoleculeSet.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MoleculeSet.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MoleculeSet.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_neighbor_shared.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_neighbor_shared.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_neighbor_shared.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_device.h:35,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_kernel.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_neighbor_shared.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_neighbor_shared.cpp:17:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_pppm.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_pppm.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_pppm.cpp
[ 14%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/NonLinearSolver.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/NonLinearSolver.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/NonLinearSolver.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_pppm.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_pppm.cpp:25:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_pppm_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_pppm_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_pppm_ext.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_re_squared.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_re_squared.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_re_squared.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_pppm.h:20,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_pppm_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_ellipsoid.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_re_squared.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_re_squared.cpp:27:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/NonLinearSolver.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/NonLinearSolver.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
[ 14%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/OutputManager.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/OutputManager.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/OutputManager.cpp
/usr/include/c++/9/bits/vector.tcc: In member function 'void ATC_matrix::SparseMatrix<T>::set(ATC_matrix::INDEX, ATC_matrix::INDEX, T) [with T = double]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/NonLinearSolver.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/NonLinearSolver.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/NonLinearSolver.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/NonLinearSolver.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/NonLinearSolver.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/NonLinearSolver.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 14%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_re_squared_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_re_squared_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_re_squared_ext.cpp
[ 14%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PaqAtcUtility.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PaqAtcUtility.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PaqAtcUtility.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_soft.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_soft.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_soft.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_ellipsoid.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_re_squared.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_re_squared_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/OutputManager.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/OutputManager.cpp:5:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_soft.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_soft.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_soft_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_soft_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_soft_ext.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_soft.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_soft_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_sw.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_sw.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_sw.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_sw_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_sw_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_sw_ext.cpp
[ 14%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ParDiagonalMatrix.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ParDiagonalMatrix.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ParDiagonalMatrix.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_three.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_sw.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_sw.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/c++/9/vector:67,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/OutputManager.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/OutputManager.cpp:5:
/usr/include/c++/9/bits/stl_vector.h: In member function 'void ATC::OutputManager::write_data(double, ATC::OUTPUT_LIST*, const int*)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1195 | _M_realloc_insert(end(), __x);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_three.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_sw.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_sw_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_table.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_table.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_table.cpp
[ 14%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ParSparseMatrix.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ParSparseMatrix.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ParSparseMatrix.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_table_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_table_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_table_ext.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_table.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_table.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 14%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantityLibrary.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantityLibrary.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantityLibrary.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_table.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_table_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 14%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerPairQuantity.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerPairQuantity.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerPairQuantity.cpp
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Matrix.h:3,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/DenseMatrix.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixLibrary.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/SparseMatrix.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ParSparseMatrix.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ParSparseMatrix.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Matrix.h:3,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/DenseMatrix.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixLibrary.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/SparseMatrix.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ParSparseMatrix.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ParSparseMatrix.cpp:1:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Matrix.h:3,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/DenseMatrix.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixLibrary.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/SparseMatrix.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ParSparseMatrix.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ParSparseMatrix.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 14%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_tersoff.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_tersoff.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_tersoff.cpp
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:17,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Matrix.h:3,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/DenseMatrix.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixLibrary.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/SparseMatrix.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ParSparseMatrix.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ParSparseMatrix.cpp:1:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void ATC_matrix::SparseMatrix<T>::set(ATC_matrix::INDEX, ATC_matrix::INDEX, T) [with T = double]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ^~~~~~~~~~~~~~~~~
[ 14%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_tersoff_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_tersoff_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_tersoff_ext.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_three.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_tersoff.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_tersoff.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_three.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_tersoff.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_tersoff_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LammpsInterface.h:25,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerPairQuantity.h:7,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerPairQuantity.cpp:1:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LammpsInterface.h:25,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerPairQuantity.h:7,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerPairQuantity.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
[ 15%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_tersoff_mod.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_tersoff_mod.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_tersoff_mod.cpp
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LammpsInterface.h:25,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerPairQuantity.h:7,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerPairQuantity.cpp:1:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LammpsInterface.h:25,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerPairQuantity.h:7,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerPairQuantity.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_three.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_tersoff_mod.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_tersoff_mod.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_tersoff_mod_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_tersoff_mod_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_tersoff_mod_ext.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_three.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_tersoff_mod.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_tersoff_mod_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 15%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PhysicsModel.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PhysicsModel.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PhysicsModel.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PoissonSolver.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PoissonSolver.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PoissonSolver.cpp
[ 16%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_tersoff_zbl.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_tersoff_zbl.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_tersoff_zbl.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_three.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_tersoff_zbl.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_tersoff_zbl.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_tersoff_zbl_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_tersoff_zbl_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_tersoff_zbl_ext.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_three.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_tersoff_zbl.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_tersoff_zbl_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array2D.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PoissonSolver.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PoissonSolver.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array2D.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PoissonSolver.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PoissonSolver.cpp:1:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array2D.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PoissonSolver.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PoissonSolver.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 16%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_ufm.cpp.o
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LammpsInterface.h:25,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantity.h:7,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantityLibrary.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantityLibrary.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_ufm.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_ufm.cpp
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LammpsInterface.h:25,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantity.h:7,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantityLibrary.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantityLibrary.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LammpsInterface.h:25,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantity.h:7,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantityLibrary.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantityLibrary.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LammpsInterface.h:25,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantity.h:7,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantityLibrary.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantityLibrary.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:17,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array2D.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PoissonSolver.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PoissonSolver.cpp:1:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void ATC_matrix::SparseMatrix<T>::set(ATC_matrix::INDEX, ATC_matrix::INDEX, T) [with T = double]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_ufm.h:21,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_ufm.cpp:26:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_ufm_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_ufm_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_ufm_ext.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PolynomialSolver.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PolynomialSolver.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PolynomialSolver.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_ufm.h:21,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_ufm_ext.cpp:22:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array2D.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PhysicsModel.h:7,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PhysicsModel.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array2D.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PhysicsModel.h:7,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PhysicsModel.cpp:1:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array2D.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PhysicsModel.h:7,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PhysicsModel.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 16%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_vashishta.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_vashishta.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_vashishta.cpp
[ 16%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_vashishta_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_vashishta_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_vashishta_ext.cpp
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PhysicsModel.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PhysicsModel.cpp:1:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void ATC_matrix::SparseMatrix<T>::set(ATC_matrix::INDEX, ATC_matrix::INDEX, T) [with T = double]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_three.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_vashishta.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_vashishta.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_three.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_vashishta.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_vashishta_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_yukawa.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_yukawa.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_yukawa.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PrescribedDataManager.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PrescribedDataManager.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PrescribedDataManager.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Quadrature.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Quadrature.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Quadrature.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_yukawa.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_yukawa.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_yukawa_colloid.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_yukawa_colloid.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_yukawa_colloid.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_yukawa_colloid.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_yukawa_colloid.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 16%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/SchrodingerSolver.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/SchrodingerSolver.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/SchrodingerSolver.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/SpeciesTimeIntegrator.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/SpeciesTimeIntegrator.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/SpeciesTimeIntegrator.cpp
[ 16%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_yukawa_colloid_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_yukawa_colloid_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_yukawa_colloid_ext.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_yukawa_colloid.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_yukawa_colloid_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_yukawa_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_yukawa_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_yukawa_ext.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_yukawa.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_yukawa_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_zbl.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_zbl.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_zbl.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Stress.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Stress.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Stress.cpp
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_zbl.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_zbl.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
[ 16%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ThermalTimeIntegrator.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ThermalTimeIntegrator.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ThermalTimeIntegrator.cpp
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:17,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array2D.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/SchrodingerSolver.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/SchrodingerSolver.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void ATC_matrix::SparseMatrix<T>::set(ATC_matrix::INDEX, ATC_matrix::INDEX, T) [with T = double]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ^~~~~~~~~~~~~~~~~
[ 16%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_zbl_ext.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/gpu -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_zbl_ext.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_zbl_ext.cpp
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array2D.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/SchrodingerSolver.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/SchrodingerSolver.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array2D.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/SchrodingerSolver.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/SchrodingerSolver.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array2D.h:9,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/SchrodingerSolver.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/SchrodingerSolver.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_atom.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_device.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_base_atomic.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_zbl.h:19,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/gpu/lal_zbl_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
| ^
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 16%] Linking CXX static library libgpu.a
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[ 16%] Built target gpu
[ 16%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Thermostat.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Thermostat.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Thermostat.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TimeFilter.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TimeFilter.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TimeFilter.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TimeIntegrator.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TimeIntegrator.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TimeIntegrator.cpp
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Matrix.h:3,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/DenseMatrix.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixLibrary.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TimeIntegrator.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ThermalTimeIntegrator.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ThermalTimeIntegrator.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Matrix.h:3,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/DenseMatrix.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixLibrary.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TimeIntegrator.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ThermalTimeIntegrator.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ThermalTimeIntegrator.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Matrix.h:3,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/DenseMatrix.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixLibrary.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TimeIntegrator.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ThermalTimeIntegrator.h:5,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ThermalTimeIntegrator.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 16%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TransferLibrary.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TransferLibrary.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TransferLibrary.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TransferOperator.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TransferOperator.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TransferOperator.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Vector.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Vector.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Vector.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ViscousStress.cpp.o
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In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomicRegulator.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Thermostat.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Thermostat.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomicRegulator.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Thermostat.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Thermostat.cpp:1:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
[ 17%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/WeakEquationChargeDiffusion.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/WeakEquationChargeDiffusion.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/WeakEquationChargeDiffusion.cpp
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/AtomicRegulator.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Thermostat.h:4,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Thermostat.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LammpsInterface.h:25,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantity.h:7,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantityLibrary.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TransferOperator.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TransferOperator.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LammpsInterface.h:25,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantity.h:7,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantityLibrary.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TransferOperator.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TransferOperator.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LammpsInterface.h:25,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantity.h:7,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantityLibrary.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TransferOperator.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TransferOperator.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 17%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/WeakEquationDiffusion.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/WeakEquationDiffusion.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/WeakEquationDiffusion.cpp
[ 17%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/WeakEquationElectronContinuity.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/WeakEquationElectronContinuity.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/WeakEquationElectronContinuity.cpp
[ 17%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/WeakEquationElectronMomentum.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/WeakEquationElectronMomentum.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/WeakEquationElectronMomentum.cpp
[ 17%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/WeakEquationElectronTemperature.cpp.o
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[ 17%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/WeakEquationMassDiffusion.cpp.o
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In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TransferLibrary.h:8,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TransferLibrary.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LammpsInterface.h:25,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantity.h:7,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantityLibrary.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TransferOperator.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TransferLibrary.h:11,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TransferLibrary.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1820 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LammpsInterface.h:25,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantity.h:7,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantityLibrary.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TransferOperator.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TransferLibrary.h:11,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TransferLibrary.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Utility.h:15,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/MatrixDef.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/Array.h:10,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/ATC_TypeDefs.h:14,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/LammpsInterface.h:25,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantity.h:7,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/PerAtomQuantityLibrary.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TransferOperator.h:6,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TransferLibrary.h:11,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/TransferLibrary.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1939 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1967 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1968 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1969 | __comp);
| ~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
1889 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 17%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/WeakEquationMomentum.cpp.o
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[ 17%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/WeakEquationPhononTemperature.cpp.o
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[ 17%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc/WeakEquationPoisson.cpp.o
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[ 17%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/atom_map.cpp.o
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[ 17%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/atom_vec.cpp.o
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[ 17%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/atom_vec_atomic.cpp.o
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[ 17%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/atom_vec_body.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 17%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/atom_vec_charge.cpp.o
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[ 17%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/atom_vec_ellipsoid.cpp.o
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[ 17%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/atom_vec_hybrid.cpp.o
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[ 18%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/atom_vec_line.cpp.o
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[ 18%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/atom_vec_sphere.cpp.o
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[ 18%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/atom_vec_tri.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/atom_vec_tri.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/atom_vec_tri.cpp
[ 18%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/balance.cpp.o
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[ 18%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/body.cpp.o
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[ 18%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/bond.cpp.o
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[ 18%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/bond_deprecated.cpp.o
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[ 18%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/bond_hybrid.cpp.o
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[ 18%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/bond_zero.cpp.o
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[ 18%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/change_box.cpp.o
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[ 18%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/citeme.cpp.o
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[ 18%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/comm.cpp.o
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[ 18%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/comm_brick.cpp.o
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[ 18%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/comm_tiled.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 19%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute.cpp.o
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[ 19%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_adf.cpp.o
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[ 19%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_aggregate_atom.cpp.o
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[ 19%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_angle.cpp.o
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[ 19%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_angle_local.cpp.o
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[ 19%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_angmom_chunk.cpp.o
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[ 19%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_bond.cpp.o
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[ 19%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_bond_local.cpp.o
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[ 19%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_centro_atom.cpp.o
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[ 19%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_centroid_stress_atom.cpp.o
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[ 19%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_chunk_atom.cpp.o
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[ 19%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_chunk_spread_atom.cpp.o
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[ 19%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_cluster_atom.cpp.o
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[ 19%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_cna_atom.cpp.o
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[ 19%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_com.cpp.o
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[ 20%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_com_chunk.cpp.o
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[ 20%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_contact_atom.cpp.o
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[ 20%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_coord_atom.cpp.o
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[ 20%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_deprecated.cpp.o
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[ 20%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_dihedral.cpp.o
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[ 20%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_dihedral_local.cpp.o
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[ 20%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_dipole_chunk.cpp.o
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[ 20%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_displace_atom.cpp.o
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[ 20%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_erotate_sphere.cpp.o
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[ 20%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_erotate_sphere_atom.cpp.o
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[ 20%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_fragment_atom.cpp.o
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[ 20%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_global_atom.cpp.o
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[ 20%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_group_group.cpp.o
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[ 20%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_gyration.cpp.o
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[ 20%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_gyration_chunk.cpp.o
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[ 21%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_heat_flux.cpp.o
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[ 21%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_hexorder_atom.cpp.o
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[ 21%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_improper.cpp.o
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[ 21%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_improper_local.cpp.o
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[ 21%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_inertia_chunk.cpp.o
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[ 21%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_ke.cpp.o
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[ 21%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_ke_atom.cpp.o
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[ 21%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_msd.cpp.o
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[ 21%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_msd_chunk.cpp.o
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[ 21%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_omega_chunk.cpp.o
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[ 21%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_orientorder_atom.cpp.o
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[ 21%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_pair.cpp.o
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[ 21%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_pair_local.cpp.o
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[ 21%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_pe.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_pe.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_pe.cpp
[ 21%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_pe_atom.cpp.o
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[ 22%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_pressure.cpp.o
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[ 22%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_property_atom.cpp.o
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[ 22%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_property_chunk.cpp.o
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[ 22%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_property_local.cpp.o
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[ 22%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_rdf.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 22%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_reduce.cpp.o
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[ 22%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_reduce_chunk.cpp.o
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[ 22%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_reduce_region.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 22%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_slice.cpp.o
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[ 22%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_stress_atom.cpp.o
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[ 22%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_temp.cpp.o
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[ 22%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_temp_chunk.cpp.o
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[ 22%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_temp_com.cpp.o
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[ 22%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_temp_deform.cpp.o
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[ 23%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_temp_partial.cpp.o
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[ 23%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_temp_profile.cpp.o
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[ 23%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_temp_ramp.cpp.o
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[ 23%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_temp_region.cpp.o
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[ 23%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_temp_sphere.cpp.o
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[ 23%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_torque_chunk.cpp.o
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[ 23%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_vacf.cpp.o
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[ 23%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/compute_vcm_chunk.cpp.o
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[ 23%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/create_atoms.cpp.o
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[ 23%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/create_bonds.cpp.o
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[ 23%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/create_box.cpp.o
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[ 23%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/delete_bonds.cpp.o
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[ 23%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/deprecated.cpp.o
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[ 23%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/dihedral.cpp.o
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[ 24%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/dihedral_deprecated.cpp.o
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[ 24%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/dihedral_hybrid.cpp.o
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[ 24%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/dihedral_zero.cpp.o
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[ 24%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/displace_atoms.cpp.o
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[ 24%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/domain.cpp.o
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[ 24%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/dump.cpp.o
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[ 24%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/dump_atom.cpp.o
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[ 24%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/dump_cfg.cpp.o
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[ 24%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/dump_custom.cpp.o
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[ 24%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/dump_dcd.cpp.o
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[ 24%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/dump_deprecated.cpp.o
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[ 24%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/dump_image.cpp.o
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[ 24%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/dump_local.cpp.o
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[ 24%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/dump_movie.cpp.o
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[ 24%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/dump_xyz.cpp.o
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[ 25%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/error.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 25%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/finish.cpp.o
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[ 25%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix.cpp.o
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[ 25%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_adapt.cpp.o
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[ 25%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_addforce.cpp.o
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[ 25%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_ave_atom.cpp.o
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[ 25%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_ave_chunk.cpp.o
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[ 25%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_ave_correlate.cpp.o
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[ 25%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_ave_histo.cpp.o
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[ 25%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_ave_histo_weight.cpp.o
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[ 25%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_ave_time.cpp.o
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[ 25%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_aveforce.cpp.o
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[ 25%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_balance.cpp.o
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[ 25%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_box_relax.cpp.o
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[ 25%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_controller.cpp.o
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[ 26%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_deform.cpp.o
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[ 26%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_deprecated.cpp.o
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[ 26%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_drag.cpp.o
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[ 26%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_dt_reset.cpp.o
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[ 26%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_enforce2d.cpp.o
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[ 26%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_external.cpp.o
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[ 26%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_gravity.cpp.o
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[ 26%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_group.cpp.o
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[ 26%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_halt.cpp.o
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[ 26%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_heat.cpp.o
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[ 26%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_indent.cpp.o
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[ 26%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_langevin.cpp.o
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[ 26%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_lineforce.cpp.o
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[ 26%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_minimize.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 27%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_momentum.cpp.o
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[ 27%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_move.cpp.o
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[ 27%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_neigh_history.cpp.o
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[ 27%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_nh.cpp.o
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[ 27%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_nh_sphere.cpp.o
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[ 27%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_nph.cpp.o
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[ 27%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_nph_sphere.cpp.o
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[ 27%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_npt.cpp.o
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[ 27%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_npt_sphere.cpp.o
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[ 27%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_nve.cpp.o
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[ 27%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_nve_limit.cpp.o
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[ 27%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_nve_noforce.cpp.o
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[ 27%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_nve_sphere.cpp.o
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[ 27%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_nvt.cpp.o
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[ 28%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_nvt_sllod.cpp.o
[ 28%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_nvt_sphere.cpp.o
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[ 28%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_planeforce.cpp.o
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[ 28%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_press_berendsen.cpp.o
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[ 28%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_print.cpp.o
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[ 28%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_property_atom.cpp.o
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[ 28%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_read_restart.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_read_restart.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_read_restart.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_recenter.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 28%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_respa.cpp.o
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[ 28%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_restrain.cpp.o
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[ 28%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_setforce.cpp.o
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[ 28%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_spring.cpp.o
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[ 28%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_spring_chunk.cpp.o
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[ 28%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_spring_rg.cpp.o
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[ 28%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_spring_self.cpp.o
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[ 28%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_store.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 29%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_store_force.cpp.o
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[ 29%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_store_state.cpp.o
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[ 29%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_temp_berendsen.cpp.o
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[ 29%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_temp_csld.cpp.o
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[ 29%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_temp_csvr.cpp.o
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[ 29%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_temp_rescale.cpp.o
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[ 29%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_tmd.cpp.o
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[ 29%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_vector.cpp.o
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[ 29%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_viscous.cpp.o
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[ 29%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_wall.cpp.o
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[ 29%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_wall_harmonic.cpp.o
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[ 29%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_wall_lj1043.cpp.o
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[ 29%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_wall_lj126.cpp.o
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[ 29%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_wall_lj93.cpp.o
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[ 30%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_wall_morse.cpp.o
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[ 30%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_wall_reflect.cpp.o
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[ 30%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix_wall_region.cpp.o
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[ 30%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/force.cpp.o
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[ 30%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/group.cpp.o
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[ 30%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/hashlittle.cpp.o
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[ 30%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/image.cpp.o
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[ 30%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/imbalance.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 30%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/imbalance_group.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 30%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/imbalance_neigh.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem 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[ 30%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/imbalance_store.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 30%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/imbalance_time.cpp.o
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[ 30%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/imbalance_var.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 30%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/improper.cpp.o
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[ 30%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/improper_deprecated.cpp.o
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[ 31%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/improper_hybrid.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 31%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/improper_zero.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/improper_zero.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/improper_zero.cpp
[ 31%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/info.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/info.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/info.cpp
[ 31%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/input.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/input.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/input.cpp
[ 31%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/integrate.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/integrate.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/integrate.cpp
[ 31%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/irregular.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 31%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/kspace.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/kspace.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/kspace.cpp
[ 31%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/kspace_deprecated.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 31%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/lammps.cpp.o
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[ 31%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/lattice.cpp.o
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[ 31%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/library.cpp.o
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[ 31%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/lmppython.cpp.o
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[ 31%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/math_extra.cpp.o
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[ 31%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/math_special.cpp.o
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[ 31%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/memory.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/memory.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/memory.cpp
[ 32%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/min.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 32%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/min_cg.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/min_cg.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/min_cg.cpp
[ 32%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/min_fire.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem 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[ 32%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/min_hftn.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 32%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/min_linesearch.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/min_linesearch.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/min_linesearch.cpp
[ 32%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/min_quickmin.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 32%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/min_sd.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/min_sd.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/min_sd.cpp
[ 32%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/minimize.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 32%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/modify.cpp.o
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[ 32%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/molecule.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF 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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/molecule.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/molecule.cpp
[ 32%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/nbin.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 32%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/nbin_standard.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/nbin_standard.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/nbin_standard.cpp
[ 32%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/neigh_list.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/neigh_list.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/neigh_list.cpp
[ 32%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/neigh_request.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/neigh_request.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/neigh_request.cpp
[ 32%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/neighbor.cpp.o
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[ 33%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair.cpp.o
[ 33%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_copy.cpp.o
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[ 33%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_full_bin.cpp.o
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[ 33%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_full_bin_atomonly.cpp.o
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[ 33%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_full_bin_ghost.cpp.o
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[ 33%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_full_multi.cpp.o
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[ 33%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_full_nsq.cpp.o
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[ 33%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_full_nsq_ghost.cpp.o
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[ 33%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_half_bin_atomonly_newton.cpp.o
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[ 33%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_half_bin_newtoff.cpp.o
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[ 33%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_half_bin_newtoff_ghost.cpp.o
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[ 33%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_half_bin_newton.cpp.o
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[ 33%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_half_bin_newton_tri.cpp.o
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[ 33%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_half_multi_newtoff.cpp.o
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[ 34%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_half_multi_newton.cpp.o
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[ 34%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_half_multi_newton_tri.cpp.o
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[ 34%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_half_nsq_newtoff.cpp.o
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[ 34%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_half_nsq_newtoff_ghost.cpp.o
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[ 34%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_half_nsq_newton.cpp.o
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[ 34%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_half_respa_bin_newtoff.cpp.o
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[ 34%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_half_respa_bin_newton.cpp.o
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[ 34%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_half_respa_bin_newton_tri.cpp.o
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[ 34%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_half_respa_nsq_newtoff.cpp.o
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[ 34%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_half_respa_nsq_newton.cpp.o
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[ 34%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_half_size_bin_newtoff.cpp.o
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[ 34%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_half_size_bin_newton.cpp.o
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[ 34%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_half_size_bin_newton_tri.cpp.o
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[ 34%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_half_size_nsq_newtoff.cpp.o
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[ 34%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_half_size_nsq_newton.cpp.o
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[ 35%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_halffull_newtoff.cpp.o
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[ 35%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_halffull_newton.cpp.o
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[ 35%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_skip.cpp.o
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[ 35%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_skip_respa.cpp.o
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[ 35%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_skip_size.cpp.o
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[ 35%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_skip_size_off2on.cpp.o
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[ 35%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/npair_skip_size_off2on_oneside.cpp.o
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[ 35%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/nstencil.cpp.o
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[ 35%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/nstencil_full_bin_2d.cpp.o
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[ 35%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/nstencil_full_bin_3d.cpp.o
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[ 35%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/nstencil_full_ghost_bin_2d.cpp.o
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[ 35%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/nstencil_full_ghost_bin_3d.cpp.o
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[ 35%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/nstencil_full_multi_2d.cpp.o
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[ 35%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/nstencil_full_multi_3d.cpp.o
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[ 35%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/nstencil_half_bin_2d_newtoff.cpp.o
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[ 36%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/nstencil_half_bin_2d_newton.cpp.o
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[ 36%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/nstencil_half_bin_2d_newton_tri.cpp.o
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[ 36%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/nstencil_half_bin_3d_newtoff.cpp.o
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[ 36%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/nstencil_half_ghost_bin_2d_newtoff.cpp.o
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[ 36%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/nstencil_half_ghost_bin_3d_newtoff.cpp.o
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[ 36%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/nstencil_half_multi_2d_newtoff.cpp.o
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[ 36%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/nstencil_half_multi_2d_newton.cpp.o
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[ 36%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/nstencil_half_multi_3d_newtoff.cpp.o
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[ 36%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/nstencil_half_multi_3d_newton.cpp.o
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[ 36%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ntopo.cpp.o
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[ 37%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ntopo_angle_partial.cpp.o
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[ 37%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ntopo_angle_template.cpp.o
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[ 37%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ntopo_bond_all.cpp.o
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[ 37%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ntopo_bond_partial.cpp.o
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[ 37%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ntopo_bond_template.cpp.o
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[ 37%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ntopo_dihedral_all.cpp.o
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[ 37%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ntopo_dihedral_partial.cpp.o
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[ 37%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ntopo_dihedral_template.cpp.o
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[ 37%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ntopo_improper_all.cpp.o
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[ 37%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ntopo_improper_partial.cpp.o
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[ 37%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ntopo_improper_template.cpp.o
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[ 37%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/output.cpp.o
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[ 37%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair.cpp
[ 37%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_beck.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 38%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_born.cpp.o
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[ 38%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_born_coul_dsf.cpp.o
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[ 38%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_born_coul_wolf.cpp.o
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[ 38%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_buck.cpp.o
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[ 38%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_buck_coul_cut.cpp.o
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[ 38%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_coul_cut.cpp.o
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[ 38%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_coul_debye.cpp.o
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[ 38%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_coul_dsf.cpp.o
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[ 38%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_coul_streitz.cpp.o
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[ 38%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_coul_wolf.cpp.o
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[ 38%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_deprecated.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_deprecated.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_deprecated.cpp
[ 38%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_dpd.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 38%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_dpd_tstat.cpp.o
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[ 38%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_gauss.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_gauss.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_gauss.cpp
[ 38%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_hybrid.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_hybrid.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_hybrid.cpp
[ 39%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_hybrid_overlay.cpp.o
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[ 39%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_lj96_cut.cpp.o
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[ 39%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_lj_cubic.cpp.o
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[ 39%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_lj_cut.cpp.o
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[ 39%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_lj_cut_coul_cut.cpp.o
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[ 39%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_lj_cut_coul_debye.cpp.o
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[ 39%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_lj_cut_coul_dsf.cpp.o
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[ 39%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_lj_cut_coul_wolf.cpp.o
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[ 39%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_lj_expand.cpp.o
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[ 39%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_lj_gromacs.cpp.o
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[ 39%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_lj_gromacs_coul_gromacs.cpp.o
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[ 39%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_lj_smooth.cpp.o
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[ 39%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_lj_smooth_linear.cpp.o
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[ 39%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_mie_cut.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem 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[ 39%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_morse.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 40%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_soft.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_soft.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_soft.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_table.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem 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[ 40%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_ufm.cpp.o
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[ 40%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_yukawa.cpp.o
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-DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE 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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_yukawa.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_yukawa.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_zbl.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 40%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_zero.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_zero.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/pair_zero.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/procmap.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem 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[ 40%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/random_mars.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 40%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/random_park.cpp.o
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[ 40%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/rcb.cpp.o
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[ 40%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/read_data.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/read_data.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/read_data.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/read_dump.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/read_dump.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/read_dump.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/read_restart.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 40%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/reader.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/reader.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/reader.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/reader_native.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/reader_native.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/reader_native.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/reader_xyz.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/reader_xyz.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/reader_xyz.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/region.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/region.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/region.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/region_block.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/region_block.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/region_block.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/region_cone.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/region_cone.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/region_cone.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/region_cylinder.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 41%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/region_deprecated.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/region_deprecated.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/region_deprecated.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/region_intersect.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF 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[ 41%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/region_plane.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/region_plane.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/region_plane.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/region_prism.cpp.o
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[ 41%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/region_sphere.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 41%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/region_union.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/region_union.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/region_union.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/replicate.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/replicate.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/replicate.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/rerun.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/rerun.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/rerun.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/reset_ids.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/reset_ids.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/reset_ids.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/respa.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/respa.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/respa.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/run.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/run.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/run.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/set.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 42%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/special.cpp.o
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[ 42%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/thermo.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/thermo.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/thermo.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/timer.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 42%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/universe.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/universe.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/universe.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/update.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 42%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/utils.cpp.o
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[ 42%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/variable.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/variable.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/variable.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/velocity.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/velocity.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/velocity.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/verlet.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/verlet.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/verlet.cpp
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::next(int, char**)':
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/variable.cpp:686:13: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
686 | fscanf(fp,"%d",&nextindex);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/write_coeff.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/write_coeff.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/write_coeff.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/write_data.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/write_data.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/write_data.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/write_dump.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/write_dump.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/write_dump.cpp
[ 43%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/write_restart.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 43%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE/compute_erotate_asphere.cpp.o
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[ 43%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE/compute_temp_asphere.cpp.o
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[ 43%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE/fix_nh_asphere.cpp.o
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[ 43%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE/fix_nph_asphere.cpp.o
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[ 43%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE/fix_npt_asphere.cpp.o
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[ 43%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE/fix_nve_asphere.cpp.o
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[ 43%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE/fix_nve_asphere_noforce.cpp.o
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[ 43%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE/fix_nve_line.cpp.o
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[ 43%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE/fix_nve_tri.cpp.o
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[ 43%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE/fix_nvt_asphere.cpp.o
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[ 43%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE/pair_gayberne.cpp.o
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[ 43%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE/pair_line_lj.cpp.o
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[ 43%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE/pair_resquared.cpp.o
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[ 43%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE/pair_tri_lj.cpp.o
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[ 44%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY/body_nparticle.cpp.o
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[ 44%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY/body_rounded_polygon.cpp.o
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[ 44%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY/body_rounded_polyhedron.cpp.o
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[ 44%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY/compute_body_local.cpp.o
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[ 44%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY/compute_temp_body.cpp.o
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[ 44%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY/fix_nh_body.cpp.o
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[ 44%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY/fix_nph_body.cpp.o
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[ 44%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY/fix_npt_body.cpp.o
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[ 44%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY/fix_nve_body.cpp.o
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[ 44%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY/fix_nvt_body.cpp.o
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[ 44%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY/fix_wall_body_polygon.cpp.o
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[ 44%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY/fix_wall_body_polyhedron.cpp.o
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[ 44%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY/pair_body_nparticle.cpp.o
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[ 44%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY/pair_body_rounded_polygon.cpp.o
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[ 44%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY/pair_body_rounded_polyhedron.cpp.o
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[ 45%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2/angle_class2.cpp.o
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[ 45%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2/bond_class2.cpp.o
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[ 45%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2/pair_lj_class2.cpp.o
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[ 45%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2/pair_lj_class2_coul_cut.cpp.o
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[ 45%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2/pair_lj_class2_coul_long.cpp.o
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[ 45%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID/fix_wall_colloid.cpp.o
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[ 45%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID/pair_brownian.cpp.o
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[ 45%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID/pair_brownian_poly.cpp.o
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[ 45%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID/pair_colloid.cpp.o
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[ 45%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID/pair_lubricate.cpp.o
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[ 45%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID/pair_lubricateU.cpp.o
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[ 45%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID/pair_lubricateU_poly.cpp.o
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[ 46%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID/pair_lubricate_poly.cpp.o
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[ 46%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID/pair_yukawa_colloid.cpp.o
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[ 46%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS/dump_atom_gz.cpp.o
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[ 46%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS/dump_cfg_gz.cpp.o
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[ 46%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS/dump_custom_gz.cpp.o
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[ 46%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS/dump_local_gz.cpp.o
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[ 46%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS/dump_xyz_gz.cpp.o
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[ 46%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL/compute_temp_cs.cpp.o
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[ 46%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL/pair_born_coul_long_cs.cpp.o
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[ 46%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL/pair_born_coul_wolf_cs.cpp.o
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[ 46%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL/pair_buck_coul_long_cs.cpp.o
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[ 46%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL/pair_coul_long_cs.cpp.o
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[ 46%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL/pair_coul_wolf_cs.cpp.o
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[ 46%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp.o
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[ 47%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE/atom_vec_dipole.cpp.o
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[ 47%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE/pair_lj_cut_dipole_cut.cpp.o
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[ 47%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE/pair_lj_cut_dipole_long.cpp.o
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[ 47%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE/pair_lj_long_dipole_long.cpp.o
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[ 47%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR/fix_freeze.cpp.o
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[ 47%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR/fix_pour.cpp.o
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[ 47%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR/fix_wall_gran.cpp.o
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[ 47%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR/fix_wall_gran_region.cpp.o
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[ 47%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR/pair_gran_hertz_history.cpp.o
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[ 47%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR/pair_gran_hooke.cpp.o
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[ 47%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR/pair_gran_hooke_history.cpp.o
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[ 47%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR/pair_granular.cpp.o
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[ 47%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/ewald.cpp.o
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[ 47%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/ewald_dipole.cpp.o
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[ 47%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/ewald_dipole_spin.cpp.o
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[ 48%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/ewald_disp.cpp.o
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[ 48%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/fft3d.cpp.o
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[ 48%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/fft3d_wrap.cpp.o
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[ 48%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/fix_tune_kspace.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 48%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/gridcomm.cpp.o
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[ 48%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/msm.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/msm.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/msm.cpp
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/fix_tune_kspace.cpp: In member function 'virtual void LAMMPS_NS::FixTuneKspace::pre_exchange()':
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/fix_tune_kspace.cpp:155:35: warning: '/long' directive output may be truncated writing 5 bytes into a region of size between 1 and 64 [-Wformat-truncation=]
155 | snprintf(new_pair_style,64,"%s/long",base_pair_style);
| ^~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/c++/9/cstdio:42,
from /usr/include/c++/9/ext/string_conversions.h:43,
from /usr/include/c++/9/bits/basic_string.h:6493,
from /usr/include/c++/9/string:55,
from /usr/include/c++/9/stdexcept:39,
from /usr/include/c++/9/array:39,
from /usr/include/c++/9/tuple:39,
from /usr/include/c++/9/bits/stl_map.h:63,
from /usr/include/c++/9/map:61,
from /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h:42,
from /usr/lib/arm-linux-gnueabihf/openmpi/include/mpi.h:2868,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/pointers.h:25,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix.h:17,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/fix_tune_kspace.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/fix_tune_kspace.cpp:18:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 6 and 69 bytes into a destination of size 64
67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
68 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/fix_tune_kspace.cpp:160:37: warning: '/msm' directive output may be truncated writing 4 bytes into a region of size between 1 and 64 [-Wformat-truncation=]
160 | snprintf(new_pair_style,64,"%s/msm",base_pair_style);
| ^~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/c++/9/cstdio:42,
from /usr/include/c++/9/ext/string_conversions.h:43,
from /usr/include/c++/9/bits/basic_string.h:6493,
from /usr/include/c++/9/string:55,
from /usr/include/c++/9/stdexcept:39,
from /usr/include/c++/9/array:39,
from /usr/include/c++/9/tuple:39,
from /usr/include/c++/9/bits/stl_map.h:63,
from /usr/include/c++/9/map:61,
from /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h:42,
from /usr/lib/arm-linux-gnueabihf/openmpi/include/mpi.h:2868,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/pointers.h:25,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix.h:17,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/fix_tune_kspace.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/fix_tune_kspace.cpp:18:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 68 bytes into a destination of size 64
67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
68 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/fix_tune_kspace.cpp:144:35: warning: '/msm' directive output may be truncated writing 4 bytes into a region of size between 1 and 64 [-Wformat-truncation=]
144 | snprintf(new_pair_style,64,"%s/msm",base_pair_style);
| ^~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/c++/9/cstdio:42,
from /usr/include/c++/9/ext/string_conversions.h:43,
from /usr/include/c++/9/bits/basic_string.h:6493,
from /usr/include/c++/9/string:55,
from /usr/include/c++/9/stdexcept:39,
from /usr/include/c++/9/array:39,
from /usr/include/c++/9/tuple:39,
from /usr/include/c++/9/bits/stl_map.h:63,
from /usr/include/c++/9/map:61,
from /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h:42,
from /usr/lib/arm-linux-gnueabihf/openmpi/include/mpi.h:2868,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/pointers.h:25,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix.h:17,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/fix_tune_kspace.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/fix_tune_kspace.cpp:18:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 68 bytes into a destination of size 64
67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
68 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/fix_tune_kspace.cpp:137:35: warning: '/long' directive output may be truncated writing 5 bytes into a region of size between 1 and 64 [-Wformat-truncation=]
137 | snprintf(new_pair_style,64,"%s/long",base_pair_style);
| ^~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/c++/9/cstdio:42,
from /usr/include/c++/9/ext/string_conversions.h:43,
from /usr/include/c++/9/bits/basic_string.h:6493,
from /usr/include/c++/9/string:55,
from /usr/include/c++/9/stdexcept:39,
from /usr/include/c++/9/array:39,
from /usr/include/c++/9/tuple:39,
from /usr/include/c++/9/bits/stl_map.h:63,
from /usr/include/c++/9/map:61,
from /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h:42,
from /usr/lib/arm-linux-gnueabihf/openmpi/include/mpi.h:2868,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/pointers.h:25,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix.h:17,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/fix_tune_kspace.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/fix_tune_kspace.cpp:18:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 6 and 69 bytes into a destination of size 64
67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
68 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/fix_tune_kspace.cpp:130:35: warning: '/long' directive output may be truncated writing 5 bytes into a region of size between 1 and 64 [-Wformat-truncation=]
130 | snprintf(new_pair_style,64,"%s/long",base_pair_style);
| ^~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/c++/9/cstdio:42,
from /usr/include/c++/9/ext/string_conversions.h:43,
from /usr/include/c++/9/bits/basic_string.h:6493,
from /usr/include/c++/9/string:55,
from /usr/include/c++/9/stdexcept:39,
from /usr/include/c++/9/array:39,
from /usr/include/c++/9/tuple:39,
from /usr/include/c++/9/bits/stl_map.h:63,
from /usr/include/c++/9/map:61,
from /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h:42,
from /usr/lib/arm-linux-gnueabihf/openmpi/include/mpi.h:2868,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/pointers.h:25,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix.h:17,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/fix_tune_kspace.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/fix_tune_kspace.cpp:18:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 6 and 69 bytes into a destination of size 64
67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
68 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 48%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/msm_cg.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD 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[ 48%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/pair_born_coul_long.cpp.o
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[ 48%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/pair_born_coul_msm.cpp.o
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[ 48%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/pair_buck_coul_long.cpp.o
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[ 48%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/pair_buck_coul_msm.cpp.o
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[ 48%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/pair_buck_long_coul_long.cpp.o
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[ 48%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/pair_coul_long.cpp.o
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[ 48%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/pair_coul_msm.cpp.o
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[ 48%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/pair_lj_charmm_coul_long.cpp.o
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[ 49%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o
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[ 49%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o
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[ 49%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/pair_lj_cut_coul_long.cpp.o
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[ 49%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/pair_lj_cut_coul_msm.cpp.o
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[ 49%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o
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[ 49%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/pair_lj_long_coul_long.cpp.o
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[ 49%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/pair_lj_long_tip4p_long.cpp.o
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[ 49%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/pair_tip4p_long.cpp.o
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[ 49%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/pppm.cpp.o
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[ 49%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/pppm_cg.cpp.o
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[ 49%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/pppm_dipole.cpp.o
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[ 49%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/pppm_dipole_spin.cpp.o
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[ 49%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/pppm_disp.cpp.o
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[ 49%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/pppm_disp_tip4p.cpp.o
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[ 50%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/pppm_stagger.cpp.o
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[ 50%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/pppm_tip4p.cpp.o
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[ 50%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/remap.cpp.o
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[ 50%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE/remap_wrap.cpp.o
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[ 50%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY/fix_qeq_comb.cpp.o
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[ 50%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY/pair_adp.cpp.o
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[ 50%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY/pair_airebo.cpp.o
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[ 50%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY/pair_airebo_morse.cpp.o
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[ 50%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY/pair_atm.cpp.o
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[ 50%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY/pair_bop.cpp.o
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[ 50%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY/pair_comb.cpp.o
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[ 50%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY/pair_comb3.cpp.o
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[ 50%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY/pair_eam.cpp.o
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[ 50%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY/pair_eam_alloy.cpp.o
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[ 50%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY/pair_eam_cd.cpp.o
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[ 51%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY/pair_eam_fs.cpp.o
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[ 51%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY/pair_eim.cpp.o
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[ 51%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY/pair_gw.cpp.o
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[ 51%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY/pair_gw_zbl.cpp.o
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[ 51%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY/pair_lcbop.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem 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[ 51%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY/pair_nb3b_harmonic.cpp.o
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[ 51%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY/pair_polymorphic.cpp.o
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[ 51%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY/pair_rebo.cpp.o
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[ 51%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY/pair_sw.cpp.o
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[ 51%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY/pair_tersoff.cpp.o
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[ 51%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY/pair_tersoff_mod.cpp.o
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[ 51%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY/pair_tersoff_mod_c.cpp.o
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[ 51%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY/pair_tersoff_zbl.cpp.o
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[ 51%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY/pair_vashishta.cpp.o
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[ 51%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY/pair_vashishta_table.cpp.o
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[ 52%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC/fix_atom_swap.cpp.o
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[ 52%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC/fix_bond_break.cpp.o
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[ 52%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC/fix_bond_create.cpp.o
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[ 52%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC/fix_bond_swap.cpp.o
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[ 52%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC/fix_gcmc.cpp.o
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[ 52%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC/fix_tfmc.cpp.o
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[ 52%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC/pair_dsmc.cpp.o
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[ 52%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC/compute_msd_nongauss.cpp.o
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[ 52%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC/compute_ti.cpp.o
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[ 52%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC/dump_xtc.cpp.o
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[ 52%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC/fix_deposit.cpp.o
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[ 52%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC/fix_efield.cpp.o
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[ 52%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC/fix_evaporate.cpp.o
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[ 52%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC/fix_gld.cpp.o
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[ 53%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC/fix_oneway.cpp.o
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[ 53%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC/fix_orient_bcc.cpp.o
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[ 53%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC/fix_orient_fcc.cpp.o
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[ 53%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC/fix_thermal_conductivity.cpp.o
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[ 53%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC/fix_ttm.cpp.o
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[ 53%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC/fix_viscosity.cpp.o
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[ 53%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC/pair_nm_cut.cpp.o
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[ 53%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC/pair_nm_cut_coul_cut.cpp.o
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[ 53%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC/pair_nm_cut_coul_long.cpp.o
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[ 53%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC/xdr_compat.cpp.o
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[ 53%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/angle_charmm.cpp.o
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[ 53%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/angle_cosine.cpp.o
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[ 53%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/angle_cosine_delta.cpp.o
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[ 53%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/angle_cosine_periodic.cpp.o
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[ 53%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/angle_cosine_squared.cpp.o
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[ 54%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/angle_harmonic.cpp.o
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[ 54%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/angle_table.cpp.o
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[ 54%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/atom_vec_angle.cpp.o
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[ 54%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/atom_vec_bond.cpp.o
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[ 54%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/atom_vec_full.cpp.o
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[ 54%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/atom_vec_molecular.cpp.o
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[ 54%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/atom_vec_template.cpp.o
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[ 54%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/bond_fene.cpp.o
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[ 54%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/bond_fene_expand.cpp.o
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[ 54%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/bond_gromos.cpp.o
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[ 54%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/bond_harmonic.cpp.o
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[ 54%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/bond_morse.cpp.o
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[ 54%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/bond_nonlinear.cpp.o
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[ 54%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/bond_quartic.cpp.o
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[ 54%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/bond_table.cpp.o
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[ 55%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/dihedral_charmm.cpp.o
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[ 55%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/dihedral_charmmfsw.cpp.o
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[ 55%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/dihedral_harmonic.cpp.o
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[ 55%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/dihedral_helix.cpp.o
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[ 55%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/dihedral_multi_harmonic.cpp.o
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[ 55%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/dihedral_opls.cpp.o
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[ 55%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/fix_cmap.cpp.o
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[ 55%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/improper_cvff.cpp.o
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[ 55%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/improper_harmonic.cpp.o
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[ 55%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/improper_umbrella.cpp.o
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[ 55%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/pair_hbond_dreiding_lj.cpp.o
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[ 55%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/pair_hbond_dreiding_morse.cpp.o
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[ 55%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp.o
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[ 55%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o
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[ 55%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp.o
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[ 56%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp.o
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[ 56%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE/pair_tip4p_cut.cpp.o
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[ 56%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI/atom_vec_peri.cpp.o
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[ 56%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI/compute_damage_atom.cpp.o
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[ 56%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI/compute_dilatation_atom.cpp.o
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[ 56%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI/compute_plasticity_atom.cpp.o
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[ 56%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI/fix_peri_neigh.cpp.o
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[ 56%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI/pair_peri_eps.cpp.o
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[ 56%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI/pair_peri_lps.cpp.o
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[ 56%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI/pair_peri_pmb.cpp.o
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[ 56%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI/pair_peri_ves.cpp.o
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[ 56%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS/fix_poems.cpp.o
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[ 56%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ/fix_qeq.cpp.o
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[ 56%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ/fix_qeq_dynamic.cpp.o
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[ 57%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ/fix_qeq_fire.cpp.o
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[ 57%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ/fix_qeq_point.cpp.o
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[ 57%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ/fix_qeq_shielded.cpp.o
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[ 57%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ/fix_qeq_slater.cpp.o
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[ 57%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA/compute_event_displace.cpp.o
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[ 57%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA/fix_event.cpp.o
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[ 57%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA/fix_event_hyper.cpp.o
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[ 57%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA/fix_event_prd.cpp.o
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[ 57%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA/fix_event_tad.cpp.o
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[ 57%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA/fix_hyper.cpp.o
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[ 57%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA/fix_hyper_global.cpp.o
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[ 57%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA/fix_hyper_local.cpp.o
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[ 57%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA/fix_neb.cpp.o
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[ 57%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA/hyper.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA/hyper.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA/hyper.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA/neb.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA/neb.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA/neb.cpp
[ 58%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA/prd.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 58%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA/tad.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA/tad.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA/tad.cpp
[ 58%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA/temper.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 58%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA/verlet_split.cpp.o
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[ 58%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID/compute_erotate_rigid.cpp.o
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[ 58%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID/compute_ke_rigid.cpp.o
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[ 58%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID/compute_rigid_local.cpp.o
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[ 58%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID/fix_ehex.cpp.o
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[ 58%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID/fix_rattle.cpp.o
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[ 58%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID/fix_rigid.cpp.o
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[ 58%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID/fix_rigid_nh.cpp.o
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[ 58%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID/fix_rigid_nh_small.cpp.o
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[ 58%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID/fix_rigid_nph.cpp.o
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[ 58%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID/fix_rigid_nph_small.cpp.o
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[ 58%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID/fix_rigid_npt.cpp.o
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[ 59%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID/fix_rigid_npt_small.cpp.o
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[ 59%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID/fix_rigid_nve.cpp.o
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[ 59%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID/fix_rigid_nve_small.cpp.o
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[ 59%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID/fix_rigid_nvt.cpp.o
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[ 59%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID/fix_rigid_nvt_small.cpp.o
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[ 59%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID/fix_rigid_small.cpp.o
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[ 59%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID/fix_shake.cpp.o
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[ 59%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK/fix_append_atoms.cpp.o
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[ 59%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK/fix_msst.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK/fix_msst.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK/fix_msst.cpp
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID/fix_rigid_small.cpp: In member function 'virtual void LAMMPS_NS::FixRigidSmall::write_restart_file(char*)':
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID/fix_rigid_small.cpp:2529:60: warning: '%s' directive output may be truncated writing up to 127 bytes into a region of size 93 [-Wformat-truncation=]
2529 | snprintf(str,128,"Cannot open fix rigid restart file %s",outfile);
| ^~ ~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/c++/9/cstdio:42,
from /usr/include/c++/9/ext/string_conversions.h:43,
from /usr/include/c++/9/bits/basic_string.h:6493,
from /usr/include/c++/9/string:55,
from /usr/include/c++/9/stdexcept:39,
from /usr/include/c++/9/array:39,
from /usr/include/c++/9/tuple:39,
from /usr/include/c++/9/bits/stl_map.h:63,
from /usr/include/c++/9/map:61,
from /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h:42,
from /usr/lib/arm-linux-gnueabihf/openmpi/include/mpi.h:2868,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/pointers.h:25,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix.h:17,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID/fix_rigid_small.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID/fix_rigid_small.cpp:14:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 36 and 163 bytes into a destination of size 128
67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
68 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 59%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK/fix_nphug.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK/fix_nphug.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK/fix_nphug.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK/fix_wall_piston.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK/fix_wall_piston.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK/fix_wall_piston.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP/compute_sna_atom.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF 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[ 59%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP/compute_snad_atom.cpp.o
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[ 59%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP/compute_snav_atom.cpp.o
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[ 59%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP/pair_snap.cpp.o
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[ 60%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP/sna.cpp.o
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[ 60%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD/fix_srd.cpp.o
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[ 60%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD/fix_wall_srd.cpp.o
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[ 60%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM/fix_store_kim.cpp.o
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[ 60%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM/kim_init.cpp.o
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[ 60%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM/kim_interactions.cpp.o
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[ 60%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM/kim_param.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem 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[ 60%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM/kim_query.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 60%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM/kim_units.cpp.o
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[ 60%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM/pair_kim.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 60%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON/fix_python_invoke.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON/fix_python_invoke.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON/fix_python_invoke.cpp
[ 60%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON/fix_python_move.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON/fix_python_move.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON/fix_python_move.cpp
In file included from /usr/include/c++/9/map:60,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM/kim_units.cpp:59:
/usr/include/c++/9/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = {anonymous}::units; _Val = std::pair<const {anonymous}::units, double>; _KeyOfValue = std::_Select1st<std::pair<const {anonymous}::units, double> >; _Compare = std::less<{anonymous}::units>; _Alloc = std::allocator<std::pair<const {anonymous}::units, double> >]':
/usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
2187 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const {anonymous}::units&>, std::tuple<>}; _Key = {anonymous}::units; _Val = std::pair<const {anonymous}::units, double>; _KeyOfValue = std::_Select1st<std::pair<const {anonymous}::units, double> >; _Compare = std::less<{anonymous}::units>; _Alloc = std::allocator<std::pair<const {anonymous}::units, double> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM/kim_units.cpp:59:
/usr/include/c++/9/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = {anonymous}::units; _Tp = double; _Compare = std::less<{anonymous}::units>; _Alloc = std::allocator<std::pair<const {anonymous}::units, double> >]':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 60%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON/pair_python.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD 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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON/pair_python.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON/pair_python.cpp
In file included from /usr/include/c++/9/map:60,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM/kim_units.cpp:59:
/usr/include/c++/9/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<{anonymous}::units&&>, std::tuple<>}; _Key = {anonymous}::units; _Val = std::pair<const {anonymous}::units, double>; _KeyOfValue = std::_Select1st<std::pair<const {anonymous}::units, double> >; _Compare = std::less<{anonymous}::units>; _Alloc = std::allocator<std::pair<const {anonymous}::units, double> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
2452 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM/kim_units.cpp:59:
/usr/include/c++/9/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = {anonymous}::units; _Tp = double; _Compare = std::less<{anonymous}::units>; _Alloc = std::allocator<std::pair<const {anonymous}::units, double> >]':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 60%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON/python_impl.cpp.o
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[ 61%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO/dump_atom_mpiio.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO/dump_atom_mpiio.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO/dump_atom_mpiio.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO/dump_cfg_mpiio.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO/dump_cfg_mpiio.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO/dump_cfg_mpiio.cpp
/usr/include/c++/9/bits/stl_map.h: In function 'double {anonymous}::get_pressure_conversion_factor({anonymous}::units, {anonymous}::units)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In function 'double {anonymous}::get_efield_conversion_factor({anonymous}::units, {anonymous}::units)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In function 'double {anonymous}::get_distance_conversion_factor({anonymous}::units, {anonymous}::units)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 61%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO/dump_custom_mpiio.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO/dump_custom_mpiio.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO/dump_custom_mpiio.cpp
/usr/include/c++/9/bits/stl_map.h: In function 'double {anonymous}::get_dipole_conversion_factor({anonymous}::units, {anonymous}::units)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In function 'double {anonymous}::get_mass_conversion_factor({anonymous}::units, {anonymous}::units)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In function 'double {anonymous}::get_density_conversion_factor({anonymous}::units, {anonymous}::units)':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 61%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO/dump_xyz_mpiio.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD 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[ 61%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO/restart_mpiio.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO/restart_mpiio.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO/restart_mpiio.cpp
/usr/include/c++/9/bits/stl_map.h: In function 'double {anonymous}::get_time_conversion_factor({anonymous}::units, {anonymous}::units)':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 61%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI/compute_voronoi_atom.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF 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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI/compute_voronoi_atom.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI/compute_voronoi_atom.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC/fix_atc.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 61%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD/atom_vec_wavepacket.cpp.o
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/usr/include/c++/9/bits/stl_map.h: In function 'double {anonymous}::get_viscosity_conversion_factor({anonymous}::units, {anonymous}::units)':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In function 'int lammps_unit_conversion(const string&, const string&, const string&, double&)':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
518 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<{anonymous}::units, std::pair<const {anonymous}::units, double>, std::_Select1st<std::pair<const {anonymous}::units, double> >, std::less<{anonymous}::units>, std::allocator<std::pair<const {anonymous}::units, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const {anonymous}::units, double> >'} changed in GCC 7.1
499 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 61%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD/fix_nve_awpmd.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD/fix_nve_awpmd.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD/fix_nve_awpmd.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD/pair_awpmd_cut.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD/pair_awpmd_cut.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD/pair_awpmd_cut.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS/compute_pressure_bocs.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 61%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS/fix_bocs.cpp.o
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[ 61%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA/bond_oxdna2_fene.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF 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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA/bond_oxdna2_fene.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA/bond_oxdna2_fene.cpp
In file included from /usr/include/c++/9/vector:72,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact/TCP/wpmd.h:145,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD/pair_awpmd_cut.cpp:39:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Vector_Nt<double, 3>&}; _Tp = Vector_Nt<double, 3>; _Alloc = std::allocator<Vector_Nt<double, 3> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Vector_Nt<double, 3> >::iterator' {aka '__gnu_cxx::__normal_iterator<Vector_Nt<double, 3>*, std::vector<Vector_Nt<double, 3> > >'} changed in GCC 7.1
[ 61%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA/bond_oxdna_fene.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA/bond_oxdna_fene.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA/bond_oxdna_fene.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA/fix_nve_dot.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA/fix_nve_dot.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA/fix_nve_dot.cpp
In file included from /usr/include/c++/9/vector:67,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact/TCP/wpmd.h:145,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD/pair_awpmd_cut.cpp:39:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void LAMMPS_NS::PairAWPMDCut::compute(int, int)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1195 | _M_realloc_insert(end(), __x);
| ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Vector_Nt<double, 3>*, std::vector<Vector_Nt<double, 3> > >' changed in GCC 7.1
1195 | _M_realloc_insert(end(), __x);
| ^~~~~~~~~~~~~~~~~
[ 62%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA/fix_nve_dotc_langevin.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA/fix_nve_dotc_langevin.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA/fix_nve_dotc_langevin.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 62%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA/pair_oxdna2_dh.cpp.o
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[ 62%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA/pair_oxdna2_excv.cpp.o
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[ 62%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA/pair_oxdna_coaxstk.cpp.o
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[ 62%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA/pair_oxdna_excv.cpp.o
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[ 62%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA/pair_oxdna_hbond.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 62%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA/pair_oxdna_stk.cpp.o
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[ 62%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA/pair_oxdna_xstk.cpp.o
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[ 62%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO/atom_vec_edpd.cpp.o
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[ 62%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO/atom_vec_mdpd.cpp.o
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[ 62%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO/atom_vec_tdpd.cpp.o
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[ 62%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO/compute_edpd_temp_atom.cpp.o
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[ 62%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO/compute_tdpd_cc_atom.cpp.o
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[ 62%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO/fix_edpd_source.cpp.o
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[ 63%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO/fix_mvv_dpd.cpp.o
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[ 63%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO/fix_mvv_edpd.cpp.o
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[ 63%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO/fix_mvv_tdpd.cpp.o
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[ 63%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO/fix_tdpd_source.cpp.o
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[ 63%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO/pair_edpd.cpp.o
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[ 63%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO/pair_mdpd.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem 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[ 63%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO/pair_mdpd_rhosum.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 63%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO/pair_tdpd.cpp.o
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[ 63%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK/angle_sdk.cpp.o
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[ 63%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK/pair_lj_sdk.cpp.o
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[ 63%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp.o
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[ 63%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK/pair_lj_sdk_coul_msm.cpp.o
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[ 63%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION/compute_saed.cpp.o
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[ 63%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION/compute_xrd.cpp.o
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[ 63%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION/fix_saed_vtk.cpp.o
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[ 64%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/atom_vec_dpd.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem 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[ 64%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/compute_dpd.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 64%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/compute_dpd_atom.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/compute_dpd_atom.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/compute_dpd_atom.cpp
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION/fix_saed_vtk.cpp: In member function 'void LAMMPS_NS::FixSAEDVTK::invoke_vector(LAMMPS_NS::bigint)':
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION/fix_saed_vtk.cpp:431:57: warning: '%s' directive output may be truncated writing up to 127 bytes into a region of size 98 [-Wformat-truncation=]
431 | snprintf(str,128,"Cannot open fix saed/vtk file %s",nName);
| ^~ ~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/c++/9/cstdio:42,
from /usr/include/c++/9/ext/string_conversions.h:43,
from /usr/include/c++/9/bits/basic_string.h:6493,
from /usr/include/c++/9/string:55,
from /usr/include/c++/9/stdexcept:39,
from /usr/include/c++/9/array:39,
from /usr/include/c++/9/tuple:39,
from /usr/include/c++/9/bits/stl_map.h:63,
from /usr/include/c++/9/map:61,
from /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h:42,
from /usr/lib/arm-linux-gnueabihf/openmpi/include/mpi.h:2868,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/pointers.h:25,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix.h:17,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION/fix_saed_vtk.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION/fix_saed_vtk.cpp:19:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 31 and 158 bytes into a destination of size 128
67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
68 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION/fix_saed_vtk.cpp: In member function 'void LAMMPS_NS::FixSAEDVTK::options(int, char**)':
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION/fix_saed_vtk.cpp:558:59: warning: '%s' directive output may be truncated writing up to 127 bytes into a region of size 98 [-Wformat-truncation=]
558 | snprintf(str,128,"Cannot open fix saed/vtk file %s",nName);
| ^~ ~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/c++/9/cstdio:42,
from /usr/include/c++/9/ext/string_conversions.h:43,
from /usr/include/c++/9/bits/basic_string.h:6493,
from /usr/include/c++/9/string:55,
from /usr/include/c++/9/stdexcept:39,
from /usr/include/c++/9/array:39,
from /usr/include/c++/9/tuple:39,
from /usr/include/c++/9/bits/stl_map.h:63,
from /usr/include/c++/9/map:61,
from /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h:42,
from /usr/lib/arm-linux-gnueabihf/openmpi/include/mpi.h:2868,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/pointers.h:25,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/fix.h:17,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION/fix_saed_vtk.h:23,
from /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION/fix_saed_vtk.cpp:19:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 31 and 158 bytes into a destination of size 128
67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
68 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 64%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/fix_dpd_energy.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/fix_dpd_energy.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/fix_dpd_energy.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/fix_eos_cv.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 64%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/fix_eos_table.cpp.o
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[ 64%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/fix_eos_table_rx.cpp.o
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[ 64%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/fix_rx.cpp.o
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[ 64%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/fix_shardlow.cpp.o
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[ 64%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/nbin_ssa.cpp.o
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[ 64%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/npair_half_bin_newton_ssa.cpp.o
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[ 64%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/nstencil_half_bin_2d_newton_ssa.cpp.o
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[ 64%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/nstencil_half_bin_3d_newton_ssa.cpp.o
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[ 64%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/pair_dpd_fdt.cpp.o
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[ 65%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/pair_dpd_fdt_energy.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem 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[ 65%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/pair_exp6_rx.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 65%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/pair_multi_lucy.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/pair_multi_lucy.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/pair_multi_lucy.cpp
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/pair_multi_lucy.cpp: In member function 'void LAMMPS_NS::PairMultiLucy::read_table(LAMMPS_NS::PairMultiLucy::Table*, char*, char*)':
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/pair_multi_lucy.cpp:370:47: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
370 | for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
| ~~~~~^~~~~~~~~~~~~~~~~
[ 65%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/pair_multi_lucy_rx.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/pair_multi_lucy_rx.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/pair_multi_lucy_rx.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/pair_table_rx.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF 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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/pair_table_rx.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD/pair_table_rx.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE/compute_temp_drude.cpp.o
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[ 65%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE/fix_drude.cpp.o
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[ 65%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE/fix_drude_transform.cpp.o
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[ 65%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE/fix_langevin_drude.cpp.o
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[ 65%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE/pair_lj_cut_thole_long.cpp.o
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[ 65%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE/pair_thole.cpp.o
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[ 65%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF/atom_vec_electron.cpp.o
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[ 65%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF/compute_ke_atom_eff.cpp.o
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[ 65%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF/compute_ke_eff.cpp.o
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[ 65%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF/compute_temp_deform_eff.cpp.o
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[ 66%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF/compute_temp_eff.cpp.o
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[ 66%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF/compute_temp_region_eff.cpp.o
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[ 66%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF/fix_langevin_eff.cpp.o
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[ 66%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF/fix_nh_eff.cpp.o
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[ 66%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF/fix_nph_eff.cpp.o
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[ 66%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF/fix_npt_eff.cpp.o
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[ 66%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF/fix_nve_eff.cpp.o
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[ 66%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF/fix_nvt_eff.cpp.o
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[ 66%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF/fix_nvt_sllod_eff.cpp.o
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[ 66%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF/fix_temp_rescale_eff.cpp.o
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[ 66%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF/pair_eff_cut.cpp.o
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[ 66%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP/compute_fep.cpp.o
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[ 66%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP/fix_adapt_fep.cpp.o
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[ 66%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP/pair_coul_cut_soft.cpp.o
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[ 66%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP/pair_coul_long_soft.cpp.o
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[ 67%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp.o
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[ 67%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp.o
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[ 67%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp.o
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[ 67%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP/pair_lj_class2_soft.cpp.o
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[ 67%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp.o
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[ 67%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp.o
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[ 67%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP/pair_lj_cut_soft.cpp.o
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[ 67%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp.o
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[ 67%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP/pair_morse_soft.cpp.o
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[ 67%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP/pair_tip4p_long_soft.cpp.o
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[ 67%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD/dump_h5md.cpp.o
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[ 67%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB/fix_lb_fluid.cpp.o
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[ 67%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB/fix_lb_momentum.cpp.o
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[ 67%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB/fix_lb_pc.cpp.o
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[ 67%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB/fix_lb_rigid_pc_sphere.cpp.o
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[ 68%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB/fix_lb_viscous.cpp.o
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[ 68%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD/fix_manifoldforce.cpp.o
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[ 68%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD/fix_nve_manifold_rattle.cpp.o
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[ 68%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD/fix_nvt_manifold_rattle.cpp.o
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[ 68%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD/manifold_cylinder.cpp.o
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[ 68%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD/manifold_cylinder_dent.cpp.o
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[ 68%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD/manifold_dumbbell.cpp.o
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[ 68%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD/manifold_ellipsoid.cpp.o
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[ 68%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD/manifold_factory.cpp.o
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[ 68%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD/manifold_gaussian_bump.cpp.o
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[ 68%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD/manifold_plane.cpp.o
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[ 68%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD/manifold_plane_wiggle.cpp.o
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[ 68%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD/manifold_spine.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD/manifold_spine.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD/manifold_spine.cpp
[ 68%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD/manifold_thylakoid.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD/manifold_thylakoid.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD/manifold_thylakoid.cpp
[ 69%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD/manifold_thylakoid_shared.cpp.o
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[ 69%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD/manifold_torus.cpp.o
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[ 69%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC/meam_dens_final.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC/meam_dens_final.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC/meam_dens_final.cpp
[ 69%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC/meam_dens_init.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC/meam_dens_init.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC/meam_dens_init.cpp
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD/manifold_thylakoid.cpp: In member function 'virtual void LAMMPS_NS::user_manifold::manifold_thylakoid::checkup()':
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD/manifold_thylakoid.cpp:62:30: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'std::vector<LAMMPS_NS::user_manifold::thyla_part*>::size_type' {aka 'unsigned int'} [-Wformat=]
62 | fprintf(screen,"I have %ld parts. They are:\n", parts.size());
| ~~^ ~~~~~~~~~~~~
| | |
| long int std::vector<LAMMPS_NS::user_manifold::thyla_part*>::size_type {aka unsigned int}
| %d
[ 69%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC/meam_force.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD 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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC/meam_force.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC/meam_force.cpp
[ 69%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC/meam_funcs.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 69%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC/meam_impl.cpp.o
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[ 69%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC/meam_setup_done.cpp.o
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[ 69%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC/meam_setup_global.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 69%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC/meam_setup_param.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC/meam_setup_param.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC/meam_setup_param.cpp
[ 69%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC/pair_meamc.cpp.o
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[ 69%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT/mgpt_linalg.cpp.o
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[ 69%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT/mgpt_readpot.cpp.o
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[ 69%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT/mgpt_splinetab.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT/mgpt_splinetab.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT/mgpt_splinetab.cpp
[ 69%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT/pair_mgpt.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT/pair_mgpt.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT/pair_mgpt.cpp
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT/mgpt_readpot.cpp: In member function 'void potdata::readpot(const char*, const char*, double)':
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT/mgpt_readpot.cpp:187:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
187 | fgets(line,sizeof(line),in);
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT/mgpt_readpot.cpp:203:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
203 | fgets(line,sizeof(line),in);
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT/mgpt_readpot.cpp:246:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
246 | fgets(line,sizeof(line),in);
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT/mgpt_readpot.cpp:306:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
306 | fgets(line,sizeof(line),in);
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT/mgpt_readpot.cpp:329:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
329 | fgets(line,sizeof(line),in);
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT/mgpt_readpot.cpp:331:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
331 | fgets(line,sizeof(line),in);
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT/mgpt_readpot.cpp:334:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
334 | fgets(line,sizeof(line),in);
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT/mgpt_readpot.cpp:343:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
343 | fgets(line,sizeof(line),in);
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT/mgpt_readpot.cpp:345:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
345 | fgets(line,sizeof(line),in);
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT/mgpt_readpot.cpp:358:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
358 | fgets(line,sizeof(line),in);
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT/mgpt_readpot.cpp: In function 'void getparmindata(const char*, int*, double*, double*, double*)':
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT/mgpt_readpot.cpp:109:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
109 | fgets(line,sizeof(line),in);
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT/mgpt_readpot.cpp:119:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
119 | fgets(line,sizeof(line),in);
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT/mgpt_readpot.cpp:123:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
123 | fgets(line,sizeof(line),in);
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~
[ 70%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/angle_cosine_shift.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/angle_cosine_shift.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/angle_cosine_shift.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/angle_cosine_shift_exp.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 70%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/angle_dipole.cpp.o
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[ 70%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/angle_fourier.cpp.o
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[ 70%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/angle_fourier_simple.cpp.o
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[ 70%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/angle_quartic.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem 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[ 70%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/bond_harmonic_shift.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 70%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/bond_harmonic_shift_cut.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/bond_harmonic_shift_cut.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/bond_harmonic_shift_cut.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/compute_ackland_atom.cpp.o
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[ 70%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/compute_basal_atom.cpp.o
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[ 70%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/compute_cnp_atom.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/compute_cnp_atom.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/compute_cnp_atom.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/compute_entropy_atom.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 70%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/compute_gyration_shape.cpp.o
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[ 70%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/compute_gyration_shape_chunk.cpp.o
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[ 70%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/compute_hma.cpp.o
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[ 71%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/compute_momentum.cpp.o
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[ 71%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/compute_pressure_cylinder.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/compute_pressure_cylinder.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/compute_pressure_cylinder.cpp
[ 71%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/compute_pressure_grem.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/compute_pressure_grem.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/compute_pressure_grem.cpp
[ 71%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/compute_stress_mop.cpp.o
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[ 71%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/compute_stress_mop_profile.cpp.o
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[ 71%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/compute_temp_rotate.cpp.o
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[ 71%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/dihedral_cosine_shift_exp.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/dihedral_cosine_shift_exp.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/dihedral_cosine_shift_exp.cpp
[ 71%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/dihedral_fourier.cpp.o
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[ 71%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/dihedral_nharmonic.cpp.o
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[ 71%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/dihedral_quadratic.cpp.o
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[ 71%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/dihedral_spherical.cpp.o
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[ 71%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/dihedral_table.cpp.o
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[ 71%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/dihedral_table_cut.cpp.o
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[ 71%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/fix_addtorque.cpp.o
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[ 71%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/fix_ave_correlate_long.cpp.o
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[ 72%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/fix_bond_react.cpp.o
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[ 72%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/fix_electron_stopping.cpp.o
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[ 72%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/fix_ffl.cpp.o
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[ 72%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/fix_filter_corotate.cpp.o
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[ 72%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/fix_flow_gauss.cpp.o
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[ 72%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/fix_gle.cpp.o
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[ 72%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/fix_grem.cpp.o
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[ 72%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/fix_imd.cpp.o
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[ 72%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/fix_ipi.cpp.o
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[ 72%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/fix_nvk.cpp.o
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[ 72%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/fix_pimd.cpp.o
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[ 72%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/fix_rhok.cpp.o
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[ 72%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/fix_smd.cpp.o
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[ 72%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/fix_srp.cpp.o
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[ 73%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/fix_ti_spring.cpp.o
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[ 73%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/fix_ttm_mod.cpp.o
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[ 73%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/fix_wall_ees.cpp.o
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[ 73%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/fix_wall_region_ees.cpp.o
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[ 73%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/improper_cossq.cpp.o
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[ 73%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/improper_distance.cpp.o
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[ 73%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/improper_fourier.cpp.o
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[ 73%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/improper_ring.cpp.o
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[ 73%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/pair_agni.cpp.o
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[ 73%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/pair_buck_mdf.cpp.o
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[ 73%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/pair_cosine_squared.cpp.o
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[ 73%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/pair_coul_diel.cpp.o
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[ 73%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/pair_coul_shield.cpp.o
[ 73%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/pair_drip.cpp.o
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[ 73%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/pair_e3b.cpp.o
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[ 74%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/pair_edip.cpp.o
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[ 74%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/pair_edip_multi.cpp.o
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[ 74%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/pair_extep.cpp.o
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[ 74%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/pair_gauss_cut.cpp.o
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[ 74%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/pair_ilp_graphene_hbn.cpp.o
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[ 74%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/pair_kolmogorov_crespi_full.cpp.o
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[ 74%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/pair_kolmogorov_crespi_z.cpp.o
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[ 74%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/pair_lebedeva_z.cpp.o
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[ 74%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/pair_lennard_mdf.cpp.o
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[ 74%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/pair_list.cpp.o
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[ 74%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/pair_lj_expand_coul_long.cpp.o
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[ 74%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/pair_lj_mdf.cpp.o
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[ 74%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/pair_lj_sf_dipole_sf.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 74%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/pair_local_density.cpp.o
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[ 74%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/pair_meam_spline.cpp.o
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[ 75%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/pair_meam_sw_spline.cpp.o
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[ 75%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/pair_momb.cpp.o
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[ 75%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/pair_morse_smooth_linear.cpp.o
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[ 75%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/pair_srp.cpp.o
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[ 75%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/pair_tersoff_table.cpp.o
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[ 75%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/temper_grem.cpp.o
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[ 75%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC/temper_npt.cpp.o
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[ 75%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF/angle_class2_p6.cpp.o
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[ 75%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF/angle_cosine_buck6d.cpp.o
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[ 75%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF/improper_inversion_harmonic.cpp.o
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[ 75%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp.o
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[ 75%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp.o
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[ 75%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE/dump_molfile.cpp.o
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[ 75%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE/molfile_interface.cpp.o
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[ 75%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE/reader_molfile.cpp.o
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[ 76%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF/dump_netcdf.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF/dump_netcdf.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF/dump_netcdf.cpp
[ 76%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF/dump_netcdf_mpiio.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF/dump_netcdf_mpiio.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF/dump_netcdf_mpiio.cpp
[ 76%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON/dynamical_matrix.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON/dynamical_matrix.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON/dynamical_matrix.cpp
[ 76%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON/fix_phonon.cpp.o
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[ 76%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON/third_order.cpp.o
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[ 76%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB/fix_qbmsst.cpp.o
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[ 76%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB/fix_qtb.cpp.o
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[ 76%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/atom_vec_smd.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/atom_vec_smd.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/atom_vec_smd.cpp
[ 76%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/compute_smd_contact_radius.cpp.o
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[ 76%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/compute_smd_damage.cpp.o
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[ 76%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/compute_smd_hourglass_error.cpp.o
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[ 76%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/compute_smd_internal_energy.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/compute_smd_internal_energy.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/compute_smd_internal_energy.cpp
[ 76%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/compute_smd_plastic_strain.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/compute_smd_plastic_strain.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/compute_smd_plastic_strain.cpp
[ 76%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/compute_smd_plastic_strain_rate.cpp.o
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[ 77%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/compute_smd_rho.cpp.o
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[ 77%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/compute_smd_tlsph_defgrad.cpp.o
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[ 77%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/compute_smd_tlsph_dt.cpp.o
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[ 77%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/compute_smd_tlsph_num_neighs.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 77%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/compute_smd_tlsph_shape.cpp.o
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[ 77%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/compute_smd_tlsph_strain.cpp.o
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[ 77%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/compute_smd_tlsph_strain_rate.cpp.o
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[ 77%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/compute_smd_tlsph_stress.cpp.o
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[ 77%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/compute_smd_triangle_vertices.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 77%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/compute_smd_ulsph_effm.cpp.o
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[ 77%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/compute_smd_ulsph_num_neighs.cpp.o
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[ 77%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/compute_smd_ulsph_strain.cpp.o
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[ 77%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/compute_smd_ulsph_strain_rate.cpp.o
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[ 77%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/compute_smd_ulsph_stress.cpp.o
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[ 77%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/compute_smd_vol.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/compute_smd_vol.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/compute_smd_vol.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/fix_smd_adjust_dt.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/fix_smd_adjust_dt.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/fix_smd_adjust_dt.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/fix_smd_integrate_tlsph.cpp.o
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[ 78%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/fix_smd_integrate_ulsph.cpp.o
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[ 78%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/fix_smd_move_triangulated_surface.cpp.o
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[ 78%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/fix_smd_setvel.cpp.o
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[ 78%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/fix_smd_tlsph_reference_configuration.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 78%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/fix_smd_wall_surface.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/fix_smd_wall_surface.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/fix_smd_wall_surface.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/pair_smd_hertz.cpp.o
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[ 78%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/pair_smd_tlsph.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/pair_smd_tlsph.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/pair_smd_tlsph.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/pair_smd_triangulated_surface.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD 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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/pair_smd_triangulated_surface.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/pair_smd_triangulated_surface.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/pair_smd_ulsph.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/pair_smd_ulsph.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/pair_smd_ulsph.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/smd_material_models.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/smd_material_models.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD/smd_material_models.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'virtual void LAMMPS_NS::PairSMTBQ::read_file(char*)':
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:434:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
434 | fgets(ptr,MAXLINE,fp);
| ~~~~~^~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:437:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
437 | fgets(ptr,MAXLINE,fp);
| ~~~~~^~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:488:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
488 | fgets(ptr,MAXLINE,fp); if (verbose) printf ("%s",ptr);
| ~~~~~^~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:492:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
492 | fgets( ptr, MAXLINE, fp);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:500:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
500 | fgets( ptr, MAXLINE, fp);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:509:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
509 | fgets( ptr, MAXLINE, fp);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:527:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
527 | fgets( ptr, MAXLINE, fp);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:541:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
541 | fgets( ptr, MAXLINE, fp);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:564:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
564 | fgets(ptr,MAXLINE,fp); if (verbose) printf ("%s",ptr);
| ~~~~~^~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:567:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
567 | fgets( ptr, MAXLINE, fp);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:620:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
620 | fgets( ptr, MAXLINE, fp);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:632:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
632 | fgets( ptr, MAXLINE, fp);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:654:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
654 | fgets( ptr, MAXLINE, fp);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:667:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
667 | fgets( ptr, MAXLINE, fp);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:674:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
674 | fgets( ptr, MAXLINE, fp);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:694:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
694 | fgets(ptr,MAXLINE,fp);
| ~~~~~^~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:697:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
697 | fgets( ptr, MAXLINE, fp);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:707:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
707 | fgets( ptr, MAXLINE, fp);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:718:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
718 | fgets( ptr, MAXLINE, fp);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:721:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
721 | fgets( ptr, MAXLINE, fp);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:726:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
726 | fgets( ptr, MAXLINE, fp);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:734:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
734 | fgets( ptr, MAXLINE, fp);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:737:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
737 | fgets( ptr, MAXLINE, fp);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:744:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
744 | fgets( ptr, MAXLINE, fp);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:747:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
747 | fgets( ptr, MAXLINE, fp);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:757:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
757 | fgets( ptr, MAXLINE, fp);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:760:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
760 | fgets( ptr, MAXLINE, fp);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:765:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
765 | fgets( ptr, MAXLINE, fp);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:791:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
791 | fgets( ptr, MAXLINE, fp);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:794:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
794 | fgets( ptr, MAXLINE, fp);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:802:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
802 | fgets( ptr, MAXLINE, fp);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ/pair_smtbq.cpp:812:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
812 | fgets( ptr, MAXLINE, fp);
| ~~~~~^~~~~~~~~~~~~~~~~~~
[ 78%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH/atom_vec_meso.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH/atom_vec_meso.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH/atom_vec_meso.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH/compute_meso_e_atom.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH/compute_meso_e_atom.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH/compute_meso_e_atom.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH/compute_meso_rho_atom.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 79%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH/compute_meso_t_atom.cpp.o
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[ 79%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH/fix_meso.cpp.o
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[ 79%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH/fix_meso_stationary.cpp.o
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[ 79%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH/pair_sph_heatconduction.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH/pair_sph_heatconduction.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH/pair_sph_heatconduction.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH/pair_sph_idealgas.cpp.o
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[ 79%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH/pair_sph_lj.cpp.o
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[ 79%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH/pair_sph_rhosum.cpp.o
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[ 79%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH/pair_sph_taitwater.cpp.o
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[ 79%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH/pair_sph_taitwater_morris.cpp.o
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[ 79%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY/compute_force_tally.cpp.o
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[ 79%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY/compute_heat_flux_tally.cpp.o
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[ 79%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY/compute_pe_mol_tally.cpp.o
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[ 79%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY/compute_pe_tally.cpp.o
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[ 80%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY/compute_stress_tally.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 80%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF/compute_pressure_uef.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF/compute_pressure_uef.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF/compute_pressure_uef.cpp
[ 80%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF/compute_temp_uef.cpp.o
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[ 80%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF/dump_cfg_uef.cpp.o
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[ 80%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF/fix_nh_uef.cpp.o
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[ 80%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF/fix_npt_uef.cpp.o
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[ 80%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF/fix_nvt_uef.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF/fix_nvt_uef.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF/fix_nvt_uef.cpp
[ 80%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF/uef_utils.cpp.o
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[ 80%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK/dump_vtk.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK/dump_vtk.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK/dump_vtk.cpp
[ 80%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/thr_data.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem 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[ 80%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/thr_omp.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 80%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/fix_omp.cpp.o
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[ 80%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/fix_nh_omp.cpp.o
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[ 80%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/fix_nh_sphere_omp.cpp.o
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[ 80%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/domain_omp.cpp.o
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[ 81%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/angle_class2_omp.cpp.o
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[ 81%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/angle_charmm_omp.cpp.o
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[ 81%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/angle_cosine_omp.cpp.o
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[ 81%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/angle_cosine_delta_omp.cpp.o
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[ 81%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/angle_cosine_periodic_omp.cpp.o
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[ 81%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/angle_cosine_squared_omp.cpp.o
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[ 81%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/angle_harmonic_omp.cpp.o
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[ 81%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/angle_table_omp.cpp.o
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[ 81%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/angle_sdk_omp.cpp.o
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[ 81%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/angle_cosine_shift_omp.cpp.o
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[ 81%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/angle_cosine_shift_exp_omp.cpp.o
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[ 81%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/angle_dipole_omp.cpp.o
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[ 81%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/angle_fourier_omp.cpp.o
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[ 81%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/angle_fourier_simple_omp.cpp.o
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[ 81%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/angle_quartic_omp.cpp.o
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[ 82%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/bond_class2_omp.cpp.o
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[ 82%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/bond_fene_omp.cpp.o
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[ 82%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/bond_fene_expand_omp.cpp.o
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[ 82%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/bond_gromos_omp.cpp.o
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[ 82%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/bond_harmonic_omp.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem 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[ 82%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/bond_morse_omp.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/bond_morse_omp.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/bond_morse_omp.cpp
[ 82%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/bond_nonlinear_omp.cpp.o
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[ 82%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/bond_quartic_omp.cpp.o
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[ 82%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/bond_table_omp.cpp.o
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[ 82%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/bond_harmonic_shift_omp.cpp.o
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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem 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[ 82%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/bond_harmonic_shift_cut_omp.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 82%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/dihedral_class2_omp.cpp.o
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[ 82%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/dihedral_charmm_omp.cpp.o
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[ 82%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/dihedral_harmonic_omp.cpp.o
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[ 82%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/dihedral_helix_omp.cpp.o
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[ 83%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/dihedral_multi_harmonic_omp.cpp.o
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[ 83%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/dihedral_opls_omp.cpp.o
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[ 83%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/dihedral_cosine_shift_exp_omp.cpp.o
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[ 83%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/dihedral_fourier_omp.cpp.o
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[ 83%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/dihedral_nharmonic_omp.cpp.o
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[ 83%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/dihedral_quadratic_omp.cpp.o
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[ 83%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/dihedral_table_omp.cpp.o
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[ 83%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/fix_gravity_omp.cpp.o
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[ 83%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/fix_neigh_history_omp.cpp.o
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[ 83%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/fix_nph_omp.cpp.o
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[ 83%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/fix_nph_sphere_omp.cpp.o
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[ 83%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/fix_npt_omp.cpp.o
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[ 83%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/fix_npt_sphere_omp.cpp.o
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[ 83%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/fix_nve_omp.cpp.o
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[ 84%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/fix_nve_sphere_omp.cpp.o
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[ 84%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/fix_nvt_omp.cpp.o
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[ 84%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/fix_nvt_sllod_omp.cpp.o
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[ 84%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/fix_nvt_sphere_omp.cpp.o
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[ 84%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/fix_nph_asphere_omp.cpp.o
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[ 84%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/fix_npt_asphere_omp.cpp.o
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[ 84%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/fix_nvt_asphere_omp.cpp.o
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[ 84%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/fix_qeq_comb_omp.cpp.o
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[ 84%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/fix_peri_neigh_omp.cpp.o
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[ 84%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/fix_rigid_omp.cpp.o
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[ 84%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/fix_rigid_nph_omp.cpp.o
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[ 84%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/fix_rigid_npt_omp.cpp.o
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[ 84%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/fix_rigid_nve_omp.cpp.o
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[ 84%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/fix_rigid_nvt_omp.cpp.o
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[ 84%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/fix_rigid_small_omp.cpp.o
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[ 85%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/improper_class2_omp.cpp.o
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[ 85%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/improper_cvff_omp.cpp.o
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[ 85%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/improper_harmonic_omp.cpp.o
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[ 85%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/improper_umbrella_omp.cpp.o
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[ 85%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/improper_cossq_omp.cpp.o
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[ 85%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/improper_fourier_omp.cpp.o
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[ 85%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/improper_ring_omp.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 85%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/respa_omp.cpp.o
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[ 85%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/ewald_omp.cpp.o
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[ 85%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/msm_omp.cpp.o
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[ 85%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/msm_cg_omp.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 85%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pppm_omp.cpp.o
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[ 85%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pppm_cg_omp.cpp.o
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[ 85%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pppm_disp_omp.cpp.o
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[ 85%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pppm_disp_tip4p_omp.cpp.o
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[ 86%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pppm_tip4p_omp.cpp.o
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[ 86%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/npair_full_bin_omp.cpp.o
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[ 86%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/npair_full_bin_atomonly_omp.cpp.o
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[ 86%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/npair_full_bin_ghost_omp.cpp.o
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[ 86%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/npair_full_multi_omp.cpp.o
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[ 86%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/npair_full_nsq_omp.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 86%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/npair_full_nsq_ghost_omp.cpp.o
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[ 86%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp.o
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[ 86%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/npair_half_bin_newtoff_omp.cpp.o
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[ 86%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp.o
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[ 86%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/npair_half_bin_newton_omp.cpp.o
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[ 86%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp.o
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[ 86%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/npair_half_multi_newtoff_omp.cpp.o
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[ 86%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/npair_half_multi_newton_omp.cpp.o
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[ 86%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp.o
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[ 87%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp.o
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[ 87%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp.o
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[ 87%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/npair_half_nsq_newton_omp.cpp.o
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[ 87%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp.o
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[ 87%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp.o
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[ 87%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp.o
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[ 87%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp.o
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[ 87%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/npair_half_size_bin_newton_omp.cpp.o
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[ 87%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp.o
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[ 87%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/npair_half_size_nsq_newtoff_omp.cpp.o
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[ 87%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/npair_half_size_nsq_newton_omp.cpp.o
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[ 87%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/npair_halffull_newtoff_omp.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/npair_halffull_newton_omp.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_beck_omp.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_born_omp.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_born_coul_wolf_omp.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_buck_omp.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_buck_coul_cut_omp.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_coul_cut_omp.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_coul_debye_omp.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_coul_dsf_omp.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_coul_wolf_omp.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_dpd_omp.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_dpd_tstat_omp.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_gauss_omp.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj96_cut_omp.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_cubic_omp.cpp.o
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[ 89%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_cut_omp.cpp.o
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[ 89%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp.o
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[ 89%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp.o
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[ 89%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp.o
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[ 89%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp.o
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[ 89%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_expand_omp.cpp.o
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[ 89%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_gromacs_omp.cpp.o
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[ 89%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp.o
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[ 89%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_smooth_omp.cpp.o
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[ 89%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_smooth_linear_omp.cpp.o
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[ 89%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_morse_omp.cpp.o
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[ 89%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_soft_omp.cpp.o
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[ 89%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_table_omp.cpp.o
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[ 89%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_ufm_omp.cpp.o
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[ 89%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_yukawa_omp.cpp.o
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[ 90%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_zbl_omp.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem 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[ 90%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_gayberne_omp.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 90%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_resquared_omp.cpp.o
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[ 90%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_class2_omp.cpp.o
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[ 90%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp.o
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[ 90%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp.o
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[ 90%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_brownian_omp.cpp.o
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[ 90%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_brownian_poly_omp.cpp.o
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[ 90%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_colloid_omp.cpp.o
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[ 90%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lubricate_omp.cpp.o
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[ 90%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lubricate_poly_omp.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lubricate_poly_omp.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lubricate_poly_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_yukawa_colloid_omp.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_yukawa_colloid_omp.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_yukawa_colloid_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp.o
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[ 90%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_gran_hertz_history_omp.cpp.o
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[ 90%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_gran_hooke_omp.cpp.o
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[ 91%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_gran_hooke_history_omp.cpp.o
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[ 91%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_born_coul_long_omp.cpp.o
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[ 91%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_born_coul_msm_omp.cpp.o
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[ 91%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_buck_coul_long_omp.cpp.o
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[ 91%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_buck_coul_msm_omp.cpp.o
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[ 91%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_buck_long_coul_long_omp.cpp.o
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[ 91%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_coul_long_omp.cpp.o
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[ 91%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_coul_msm_omp.cpp.o
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[ 91%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp.o
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[ 91%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp.o
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[ 91%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp.o
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[ 91%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp.o
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[ 91%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp.o
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[ 91%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_long_coul_long_omp.cpp.o
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[ 92%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp.o
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[ 92%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_tip4p_long_omp.cpp.o
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[ 92%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_adp_omp.cpp.o
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[ 92%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_airebo_omp.cpp.o
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[ 92%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_airebo_morse_omp.cpp.o
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[ 92%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_comb_omp.cpp.o
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[ 92%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_eam_omp.cpp.o
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[ 92%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_eam_alloy_omp.cpp.o
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[ 92%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_eam_cd_omp.cpp.o
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[ 92%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_eam_fs_omp.cpp.o
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[ 92%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_eim_omp.cpp.o
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[ 92%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_rebo_omp.cpp.o
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[ 92%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_sw_omp.cpp.o
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[ 92%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_tersoff_omp.cpp.o
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[ 92%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_tersoff_mod_omp.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" 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[ 93%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_tersoff_mod_c_omp.cpp.o
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[ 93%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_tersoff_zbl_omp.cpp.o
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[ 93%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_vashishta_omp.cpp.o
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[ 93%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_vashishta_table_omp.cpp.o
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[ 93%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_nm_cut_omp.cpp.o
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[ 93%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp.o
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[ 93%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp.o
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[ 93%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp.o
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[ 93%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp.o
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[ 93%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp.o
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[ 93%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp.o
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[ 93%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp.o
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[ 93%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_tip4p_cut_omp.cpp.o
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[ 93%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_peri_lps_omp.cpp.o
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[ 93%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_peri_pmb_omp.cpp.o
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[ 94%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_sdk_omp.cpp.o
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[ 94%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp.o
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[ 94%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp.o
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[ 94%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp.o
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[ 94%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_coul_cut_soft_omp.cpp.o
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[ 94%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_coul_long_soft_omp.cpp.o
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[ 94%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_charmm_coul_long_soft_omp.cpp.o
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[ 94%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp.o
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[ 94%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp.o
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[ 94%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp.o
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[ 94%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_tip4p_long_soft_omp.cpp.o
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[ 94%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_agni_omp.cpp.o
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[ 94%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_coul_diel_omp.cpp.o
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[ 94%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_edip_omp.cpp.o
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[ 95%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_gauss_cut_omp.cpp.o
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[ 95%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp.o
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[ 95%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_meam_spline_omp.cpp.o
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[ 95%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_morse_smooth_linear_omp.cpp.o
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[ 95%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/pair_tersoff_table_omp.cpp.o
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[ 95%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/fix_nh_asphere_omp.cpp.o
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[ 95%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP/fix_rigid_nh_omp.cpp.o
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[ 95%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT/pair_lj_cut_opt.cpp.o
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[ 95%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT/pair_morse_opt.cpp.o
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[ 95%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT/pair_ufm_opt.cpp.o
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[ 95%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT/pair_lj_charmm_coul_long_opt.cpp.o
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[ 95%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT/pair_lj_cut_coul_long_opt.cpp.o
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[ 95%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT/pair_lj_cut_tip4p_long_opt.cpp.o
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[ 95%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT/pair_lj_long_coul_long_opt.cpp.o
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[ 96%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT/pair_eam_alloy_opt.cpp.o
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[ 96%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT/pair_eam_fs_opt.cpp.o
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[ 96%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/fix_gpu.cpp.o
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[ 96%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pppm_gpu.cpp.o
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[ 96%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_beck_gpu.cpp.o
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[ 96%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_born_gpu.cpp.o
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[ 96%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_born_coul_wolf_gpu.cpp.o
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[ 96%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_buck_gpu.cpp.o
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[ 96%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_buck_coul_cut_gpu.cpp.o
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[ 96%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_coul_cut_gpu.cpp.o
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[ 96%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_coul_debye_gpu.cpp.o
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[ 96%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_coul_dsf_gpu.cpp.o
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[ 96%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_dpd_gpu.cpp.o
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[ 96%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_dpd_tstat_gpu.cpp.o
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[ 97%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_gauss_gpu.cpp.o
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[ 97%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_lj96_cut_gpu.cpp.o
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[ 97%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_lj_cubic_gpu.cpp.o
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[ 97%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_lj_cut_gpu.cpp.o
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[ 97%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o
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[ 97%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_lj_gromacs_gpu.cpp.o
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[ 97%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_mie_cut_gpu.cpp.o
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[ 97%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_morse_gpu.cpp.o
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[ 97%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_soft_gpu.cpp.o
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[ 97%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_table_gpu.cpp.o
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[ 97%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_ufm_gpu.cpp.o
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[ 97%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_yukawa_gpu.cpp.o
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[ 98%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_zbl_gpu.cpp.o
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[ 98%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_gayberne_gpu.cpp.o
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[ 98%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_resquared_gpu.cpp.o
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[ 98%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_lj_class2_gpu.cpp.o
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[ 98%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o
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[ 98%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_colloid_gpu.cpp.o
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[ 98%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_yukawa_colloid_gpu.cpp.o
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[ 98%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_born_coul_long_cs_gpu.cpp.o
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[ 98%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_born_coul_wolf_cs_gpu.cpp.o
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[ 98%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_coul_long_cs_gpu.cpp.o
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[ 98%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o
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[ 98%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_lj_cut_dipole_long_gpu.cpp.o
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[ 98%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_born_coul_long_gpu.cpp.o
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[ 98%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_buck_coul_long_gpu.cpp.o
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[ 98%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_coul_long_gpu.cpp.o
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[ 99%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o
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[ 99%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o
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[ 99%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o
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[ 99%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_eam_gpu.cpp.o
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[ 99%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_eam_alloy_gpu.cpp.o
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[ 99%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_eam_fs_gpu.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_eam_fs_gpu.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_eam_fs_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_sw_gpu.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE 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-I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem 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[ 99%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_tersoff_gpu.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_tersoff_gpu.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_tersoff_gpu.cpp
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_eam_fs_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFSGPU::read_file(char*)':
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_eam_fs_gpu.cpp:376:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
376 | fgets(line,MAXLINE,fptr);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_eam_fs_gpu.cpp:377:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
377 | fgets(line,MAXLINE,fptr);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_eam_fs_gpu.cpp:378:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
378 | fgets(line,MAXLINE,fptr);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_eam_fs_gpu.cpp:379:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
379 | fgets(line,MAXLINE,fptr);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_eam_fs_gpu.cpp:404:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
404 | fgets(line,MAXLINE,fptr);
| ~~~~~^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_eam_fs_gpu.cpp:426:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
426 | fgets(line,MAXLINE,fptr);
| ~~~~~^~~~~~~~~~~~~~~~~~~
[ 99%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_tersoff_mod_gpu.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-BOCS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGDNA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MESO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-CGSDK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DIFFRACTION -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DPD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-DRUDE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-EFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-FEP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-H5MD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-LB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MANIFOLD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MEAMC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MGPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOFFF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-MOLFILE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-NETCDF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-PHONON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-QTB -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SMTBQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-SPH -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-TALLY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-UEF -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-VTK -I/usr/include/hdf5/serial -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-OMP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/OPT -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU -I/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/molfile -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/poems -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/atc -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/systems/interact -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/awpmd/ivutils/include -I/<<BUILDDIR>>/lammps-20191120+dfsg1/lib/h5md/include -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_tersoff_mod_gpu.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_tersoff_mod_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_tersoff_zbl_gpu.cpp.o
/usr/bin/c++ -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_KIM_CURL -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -Dlammps_EXPORTS -DvtkDomainsChemistry_AUTOINIT="1(vtkDomainsChemistryOpenGL2)" -DvtkFiltersCore_AUTOINIT="1(vtkFiltersParallelDIY2)" -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL2)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLICOpenGL2_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingOpenGL2_AUTOINIT="1(vtkRenderingGL2PSOpenGL2)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL2)" -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python3.8 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-7.1 -I/usr/include/freetype2 -I/usr/include/python3.7m -I/usr/include/hdf5/openmpi -I/usr/include/jsoncpp -I/usr/include/libxml2 -I/usr/include/tcl -I/usr/include/kim-api -I/usr/lib/arm-linux-gnueabihf/kim-api/mod -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/ASPHERE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/BODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CLASS2 -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COLLOID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/COMPRESS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/CORESHELL -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/DIPOLE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GRANULAR -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KSPACE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MANYBODY -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MISC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MOLECULE -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PERI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/POEMS -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/QEQ -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/REPLICA -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/RIGID -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SHOCK -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SNAP -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/SRD -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/KIM -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/PYTHON -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/MPIIO -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/VORONOI -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-ATC -I/<<BUILDDIR>>/lammps-20191120+dfsg1/src/USER-AWPMD 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/usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -o CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_tersoff_zbl_gpu.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_tersoff_zbl_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_vashishta_gpu.cpp.o
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[ 99%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_lj_sdk_gpu.cpp.o
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[ 99%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_lj_sdk_coul_long_gpu.cpp.o
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[ 99%] Building CXX object CMakeFiles/lammps.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/GPU/pair_lj_expand_coul_long_gpu.cpp.o
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/usr/bin/cmake -E cmake_symlink_library liblammps.so.0 liblammps.so.0 liblammps.so
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[100%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/main.cpp.o
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/usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIE -fPIC -o CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/main.cpp.o -c /<<BUILDDIR>>/lammps-20191120+dfsg1/src/main.cpp
[100%] Linking CXX executable lmp
/usr/bin/cmake -E cmake_link_script CMakeFiles/lmp.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-20191120+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -rdynamic CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-20191120+dfsg1/src/main.cpp.o -o lmp -Wl,-rpath,/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build:/usr/lib/arm-linux-gnueabihf/openmpi/lib:/usr/lib/arm-linux-gnueabihf/hdf5/openmpi:/usr/lib/arm-linux-gnueabihf/hdf5/serial: liblammps.so.0 -ljpeg -lpng -lfftw3 -lpython3.8 -lvoro++ -lexpat /usr/lib/arm-linux-gnueabihf/libvtkDomainsChemistryOpenGL2-7.1.so.7.1p.1 /usr/lib/arm-linux-gnueabihf/libvtkDomainsChemistry-7.1.so.7.1p.1 -ltiff /usr/lib/arm-linux-gnueabihf/libvtkFiltersGeneric-7.1.so.7.1p.1 /usr/lib/arm-linux-gnueabihf/libvtkFiltersHyperTree-7.1.so.7.1p.1 /usr/lib/arm-linux-gnueabihf/libvtkFiltersParallelDIY2-7.1.so.7.1p.1 /usr/lib/arm-linux-gnueabihf/libvtkFiltersParallelFlowPaths-7.1.so.7.1p.1 /usr/lib/arm-linux-gnueabihf/libvtkFiltersFlowPaths-7.1.so.7.1p.1 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/usr/lib/arm-linux-gnueabihf/libvtkCommonColor-7.1.so.7.1p.1 /usr/lib/arm-linux-gnueabihf/libvtkFiltersGeometry-7.1.so.7.1p.1 /usr/lib/arm-linux-gnueabihf/libvtkFiltersSources-7.1.so.7.1p.1 /usr/lib/arm-linux-gnueabihf/libvtkFiltersGeneral-7.1.so.7.1p.1 /usr/lib/arm-linux-gnueabihf/libvtkCommonComputationalGeometry-7.1.so.7.1p.1 /usr/lib/arm-linux-gnueabihf/libvtkFiltersCore-7.1.so.7.1p.1 /usr/lib/arm-linux-gnueabihf/libvtkCommonExecutionModel-7.1.so.7.1p.1 /usr/lib/arm-linux-gnueabihf/libvtkCommonDataModel-7.1.so.7.1p.1 /usr/lib/arm-linux-gnueabihf/libvtkCommonTransforms-7.1.so.7.1p.1 /usr/lib/arm-linux-gnueabihf/libvtkCommonMisc-7.1.so.7.1p.1 /usr/lib/arm-linux-gnueabihf/libvtkCommonMath-7.1.so.7.1p.1 /usr/lib/arm-linux-gnueabihf/libvtkCommonSystem-7.1.so.7.1p.1 /usr/lib/arm-linux-gnueabihf/libvtksys-7.1.so.7.1p.1 -ldl -lfreetype /usr/lib/arm-linux-gnueabihf/libvtkWrappingJava-7.1.so.7.1p.1 /usr/lib/arm-linux-gnueabihf/libvtkCommonCore-7.1.so.7.1p.1 -lcurl -Wl,-rpath,/usr/lib/arm-linux-gnueabihf -lkim-api -lm libpoems.a libatc.a libawpmd.a -llapack -lblas libh5md.a /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lz -lsz -ldl -lm libgpu.a -lOpenCL
make[3]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
[100%] Built target lmp
make[2]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
/usr/bin/cmake -E cmake_progress_start /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/CMakeFiles 0
make[1]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
debian/rules override_dh_auto_test-arch
make[1]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1'
mkdir test; cp examples/crack/* test/
cd test; /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/lmp < in.crack
No protocol specified
LAMMPS (20 Nov 2019)
Lattice spacing in x,y,z = 1.11428 1.92998 1.11428
Created orthogonal box = (0 0 -0.278569) to (111.428 77.1994 0.278569)
1 by 1 by 1 MPI processor grid
Created 8141 atoms
create_atoms CPU = 0.00639956 secs
302 atoms in group lower
302 atoms in group upper
604 atoms in group boundary
7537 atoms in group mobile
841 atoms in group leftupper
841 atoms in group leftlower
Setting atom values ...
841 settings made for type
Setting atom values ...
841 settings made for type
Setting atom values ...
302 settings made for type
Setting atom values ...
302 settings made for type
WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:485)
Neighbor list info ...
update every 1 steps, delay 5 steps, check yes
max neighbors/atom: 2000, page size: 100000
master list distance cutoff = 2.8
ghost atom cutoff = 2.8
binsize = 1.4, bins = 80 56 1
1 neighbor lists, perpetual/occasional/extra = 1 0 0
(1) pair lj/cut, perpetual
attributes: half, newton on
pair build: half/bin/atomonly/newton
stencil: half/bin/2d/newton
bin: standard
Setting up Verlet run ...
Unit style : lj
Current step : 0
Time step : 0.003
Per MPI rank memory allocation (min/avg/max) = 2.8 | 2.8 | 2.8 Mbytes
Step Temp E_pair E_mol TotEng Press Volume
0 0.065651733 -3.2595015 0 -3.1987287 -0.036239172 8605.5917
200 0.060086376 -3.2531936 0 -3.1975725 -0.23125026 8638.8101
400 0.060533553 -3.2509973 0 -3.1949623 -0.4305406 8679.2464
600 0.06082965 -3.2466949 0 -3.1903858 -0.6028531 8716.7569
800 0.061677224 -3.2413215 0 -3.1842278 -0.7482749 8756.226
1000 0.062383731 -3.2349273 0 -3.1771796 -0.87425132 8793.1116
1200 0.063709246 -3.2276094 0 -3.1686347 -0.98020161 8828.8863
1400 0.065404552 -3.2196608 0 -3.1591168 -1.0695384 8866.4893
1600 0.067579602 -3.2110378 0 -3.1484804 -1.1456387 8900.6772
1800 0.069324241 -3.2018536 0 -3.1376812 -1.2020999 8933.017
2000 0.071014927 -3.1921108 0 -3.1263733 -1.2430105 8963.9853
2200 0.072992881 -3.1818701 0 -3.1143017 -1.2701297 9004.4136
2400 0.075000723 -3.1712313 0 -3.1018043 -1.2830866 9034.9991
2600 0.076843477 -3.1601004 0 -3.0889675 -1.27924 9072.1325
2800 0.078671706 -3.1487747 0 -3.0759495 -1.2659604 9103.9526
3000 0.080713586 -3.1373277 0 -3.0626123 -1.2440673 9134.552
3200 0.08309469 -3.1260242 0 -3.0491047 -1.214547 9169.0003
3400 0.085424766 -3.1146623 0 -3.0355859 -1.1839326 9206.909
3600 0.087396485 -3.1029493 0 -3.0220477 -1.143412 9233.783
3800 0.089007987 -3.090822 0 -3.0084286 -1.1000791 9259.0348
4000 0.089813071 -3.0794078 0 -2.9962692 -1.062847 9281.82
4200 0.08584753 -3.0668559 0 -2.9873882 -1.037972 9308.8113
4400 0.086197517 -3.0559678 0 -2.9761761 -1.028843 9328.9666
4600 0.086766447 -3.0437627 0 -2.9634443 -1.0208785 9361.9925
4800 0.088195149 -3.0328502 0 -2.9512093 -1.0272063 9395.6122
5000 0.089415266 -3.0228825 0 -2.9401122 -1.0215336 9436.1637
Loop time of 43.6959 on 1 procs for 5000 steps with 8141 atoms
Performance: 29659.525 tau/day, 114.427 timesteps/s
99.7% CPU use with 1 MPI tasks x no OpenMP threads
MPI task timing breakdown:
Section | min time | avg time | max time |%varavg| %total
---------------------------------------------------------------
Pair | 36.643 | 36.643 | 36.643 | 0.0 | 83.86
Neigh | 1.9658 | 1.9658 | 1.9658 | 0.0 | 4.50
Comm | 0.064076 | 0.064076 | 0.064076 | 0.0 | 0.15
Output | 0.0063992 | 0.0063992 | 0.0063992 | 0.0 | 0.01
Modify | 3.9555 | 3.9555 | 3.9555 | 0.0 | 9.05
Other | | 1.061 | | | 2.43
Nlocal: 8141 ave 8141 max 8141 min
Histogram: 1 0 0 0 0 0 0 0 0 0
Nghost: 0 ave 0 max 0 min
Histogram: 1 0 0 0 0 0 0 0 0 0
Neighs: 71389 ave 71389 max 71389 min
Histogram: 1 0 0 0 0 0 0 0 0 0
Total # of neighbors = 71389
Ave neighs/atom = 8.76907
Neighbor list builds = 100
Dangerous builds = 0
Total wall time: 0:00:43
rm -rf test
make[1]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1'
create-stamp debian/debhelper-build-stamp
fakeroot debian/rules binary-arch
dh binary-arch --with python3,sphinxdoc --sourcedirectory=cmake --builddirectory=/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build
dh_testroot -a -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-20191120\+dfsg1/debian/build
dh_prep -a -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-20191120\+dfsg1/debian/build
dh_auto_install -a -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-20191120\+dfsg1/debian/build
cd debian/build && make -j4 install DESTDIR=/<<BUILDDIR>>/lammps-20191120\+dfsg1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true"
make[1]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
/usr/bin/cmake -S/<<BUILDDIR>>/lammps-20191120+dfsg1/cmake -B/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/CMakeFiles /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[2]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
make -f CMakeFiles/h5md.dir/build.make CMakeFiles/h5md.dir/depend
make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/depend
make -f CMakeFiles/awpmd.dir/build.make CMakeFiles/awpmd.dir/depend
make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
cd /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/lammps-20191120+dfsg1/cmake /<<BUILDDIR>>/lammps-20191120+dfsg1/cmake /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/CMakeFiles/h5md.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
cd /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/lammps-20191120+dfsg1/cmake /<<BUILDDIR>>/lammps-20191120+dfsg1/cmake /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/CMakeFiles/awpmd.dir/DependInfo.cmake --color=
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make -f CMakeFiles/awpmd.dir/build.make CMakeFiles/awpmd.dir/build
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make[3]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
make -f CMakeFiles/h5md.dir/build.make CMakeFiles/h5md.dir/build
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make[3]: Nothing to be done for 'CMakeFiles/h5md.dir/build'.
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[ 0%] Built target awpmd
make -f CMakeFiles/gitversion.dir/build.make CMakeFiles/gitversion.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
cd /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/lammps-20191120+dfsg1/cmake /<<BUILDDIR>>/lammps-20191120+dfsg1/cmake /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/CMakeFiles/gitversion.dir/DependInfo.cmake --color=
[ 1%] Built target h5md
make -f CMakeFiles/poems.dir/build.make CMakeFiles/poems.dir/depend
make[3]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
make -f CMakeFiles/gitversion.dir/build.make CMakeFiles/gitversion.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
cd /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/lammps-20191120+dfsg1/cmake /<<BUILDDIR>>/lammps-20191120+dfsg1/cmake /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/CMakeFiles/atc.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
/usr/bin/cmake -DCMAKE_CURRENT_SOURCE_DIR="/<<BUILDDIR>>/lammps-20191120+dfsg1/cmake" -DGIT_EXECUTABLE="GIT_EXECUTABLE-NOTFOUND" -DGIT_FOUND="FALSE" -DLAMMPS_STYLE_HEADERS_DIR="/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/styles" -P /<<BUILDDIR>>/lammps-20191120+dfsg1/cmake/Modules/generate_lmpgitversion.cmake
make[3]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
cd /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/lammps-20191120+dfsg1/cmake /<<BUILDDIR>>/lammps-20191120+dfsg1/cmake /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/CMakeFiles/poems.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
-- Generating lmpgitversion.h...
cd /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/lammps-20191120+dfsg1/cmake /<<BUILDDIR>>/lammps-20191120+dfsg1/cmake /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/CMakeFiles/gpu.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
make -f CMakeFiles/poems.dir/build.make CMakeFiles/poems.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
make[3]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
make[3]: Nothing to be done for 'CMakeFiles/poems.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
[ 1%] Built target gitversion
make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/depend
make[3]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/build
[ 4%] Built target poems
make[3]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
cd /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/lammps-20191120+dfsg1/cmake /<<BUILDDIR>>/lammps-20191120+dfsg1/cmake /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/CMakeFiles/ocl_get_devices.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
make[3]: Nothing to be done for 'CMakeFiles/ocl_get_devices.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
[ 4%] Built target ocl_get_devices
make[3]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
make[3]: Nothing to be done for 'CMakeFiles/atc.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
[ 9%] Built target atc
make[3]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
make[3]: Nothing to be done for 'CMakeFiles/gpu.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
[ 17%] Built target gpu
make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
cd /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/lammps-20191120+dfsg1/cmake /<<BUILDDIR>>/lammps-20191120+dfsg1/cmake /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/CMakeFiles/lammps.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
make[3]: Nothing to be done for 'CMakeFiles/lammps.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
[100%] Built target lammps
make -f CMakeFiles/lmp.dir/build.make CMakeFiles/lmp.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
cd /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/lammps-20191120+dfsg1/cmake /<<BUILDDIR>>/lammps-20191120+dfsg1/cmake /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/CMakeFiles/lmp.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
make -f CMakeFiles/lmp.dir/build.make CMakeFiles/lmp.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
make[3]: Nothing to be done for 'CMakeFiles/lmp.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
[100%] Built target lmp
make[2]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
/usr/bin/cmake -E cmake_progress_start /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build/CMakeFiles 0
make -f CMakeFiles/Makefile2 preinstall
make[2]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
make[2]: Nothing to be done for 'preinstall'.
make[2]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/lib/arm-linux-gnueabihf/liblammps.so.0
-- Set runtime path of "/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/lib/arm-linux-gnueabihf/liblammps.so.0" to ""
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/lib/arm-linux-gnueabihf/liblammps.so
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/library.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/angle.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/atom.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/bond.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/citeme.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/comm.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/compute.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/dihedral.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/domain.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/error.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/fix.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/force.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/group.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/improper.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/input.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/kspace.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/lammps.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/lattice.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/lmppython.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/memory.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/modify.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/neighbor.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/neigh_list.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/output.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/pair.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/pointers.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/region.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/timer.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/universe.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/update.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/include/lammps/variable.h
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig/liblammps.pc
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/cmake/Modules/FindLAMMPS.cmake
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/bin/lmp
-- Set runtime path of "/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/bin/lmp" to ""
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/man/man1/lmp.1
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Ag_u3.eam
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/AlCu.adp
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/AlCu.bop.table
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/AlCu.eam.alloy
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/AlFe_mm.eam.fs
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/AlO.eam.alloy
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/AlO.streitz
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/AlSiMgCuFe.meam
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Al_jnp.eam
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Al_jpc.agni
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Al_mm.eam.fs
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Al_prb.agni
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Al_zhou.eam.alloy
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Au_u3.eam
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/BN.extep
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/BNC.tersoff
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/BNCH-old.ILP
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/BNCH.ILP
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/C.drip
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/C.lcbop
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/CC.KC
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/CC.KC-full
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/CC.Lebedeva
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/CCu_v2.bop.table
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/CH.KC
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/CH.airebo
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/CH.airebo-m
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/CH.rebo
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/CH_taper.KC
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/CdTe.bop.table
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/CdTe.sw
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/CdTeSe.bop.table
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/CdTeZnSeHgS0.sw
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/CdZnTe_v1.bop.table
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/CdZnTe_v2.bop.table
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/CoAl.eam.alloy
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Cu.meam
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/CuH.bop.table
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/CuNi.eam.alloy
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/CuTa.eam.alloy
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/CuTa_eam.poly
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/CuZr_mm.eam.fs
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Cu_mishin1.eam.alloy
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Cu_smf7.eam
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Cu_u3.eam
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Cu_u6.eam
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Cu_zhou.eam.alloy
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/FeCr.cdeam
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/FeP_mm.eam.fs
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Fe_mm.eam.fs
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/GaAs.bop.table
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/GaN.sw
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/GaN.tersoff
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/GaN_sw.poly
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/GaN_tersoff.poly
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Ge.tersoff
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/He_He_JW2013.table
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/InP.vashishta
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/MOH.nb3b.harmonic
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Mg_mm.eam.fs
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Mo5.2.mgpt.README
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Mo5.2.mgpt.parmin
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Mo5.2.mgpt.potin
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Mo_Chen_PRM2017.snap
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Mo_Chen_PRM2017.snapcoeff
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Mo_Chen_PRM2017.snapparam
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Ni.adp
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Ni.meam
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/NiAlH_jea.eam.alloy
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/NiAlH_jea.eam.fs
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Ni_smf7.eam
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Ni_u3.eam
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Pd_u3.eam
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Pt_u3.eam
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/README
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/README.reax
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Si.b.meam.sw.spline
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Si.edip
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Si.sw
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Si.tersoff
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Si.tersoff.mod
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Si.tersoff.modc
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/SiC.edip
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/SiC.gw
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/SiC.gw.zbl
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/SiC.meam
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/SiC.tersoff
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/SiC.tersoff.zbl
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/SiC.vashishta
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/SiCGe.tersoff
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/SiC_1989.tersoff
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/SiC_1990.tersoff
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/SiC_1994.tersoff
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/SiC_Erhart-Albe.tersoff
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/SiO.1990.vashishta
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/SiO.1994.vashishta
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/SiO.1997.vashishta
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/SiO.tersoff
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Si_1.meam.spline
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Si_2.meam.spline
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Ta06A.snap
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Ta06A.snapcoeff
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Ta06A.snapparam
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Ta4.mgpt.README
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Ta4.mgpt.parmin
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Ta4.mgpt.potin
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Ta6.8x.mgpt.README
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Ta6.8x.mgpt.parmin
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Ta6.8x.mgpt.potin
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Ti.meam.spline
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Ti.meam.sw.spline
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/TiO.meam.spline
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/V6.1.mgpt.README
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/V6.1.mgpt.parmin
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/V6.1.mgpt.potin
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/VFe_mm.eam.fs
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/WBe_Wood_PRB2019.snap
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/WBe_Wood_PRB2019.snapcoeff
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/WBe_Wood_PRB2019.snapparam
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/WL.meam
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/W_2940_2017_2.snap
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/W_2940_2017_2.snapcoeff
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/W_2940_2017_2.snapparam
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/W_2940_2017_2_He_JW2013.snap
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/W_He_JW2013.table
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/W_zhou.eam.alloy
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/Zr_mm.eam.fs
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/charmm22.cmap
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/charmm36.cmap
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/ci-reaxFF_ZBL.dat
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/ffield.ci-reax.CH
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/ffield.comb
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/ffield.comb3
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/ffield.eim
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/ffield.reax.AB
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/ffield.reax.AuO
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/ffield.reax.FC
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/ffield.reax.Fe_O_C_H
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/ffield.reax.V_O_C_H
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/ffield.reax.ZnOH
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/ffield.reax.budzien
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/ffield.reax.cho
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/ffield.reax.lg
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/ffield.reax.mattsson
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/ffield.reax.rdx
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/ffield.smtbq.Al
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/ffield.smtbq.Al2O3
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/ffield.smtbq.TiO2
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/lib.comb3
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/share/lammps/potentials/library.meam
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/etc/profile.d/lammps.sh
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/etc/profile.d/lammps.csh
-- Installing: /<<BUILDDIR>>/lammps-20191120+dfsg1/debian/tmp/usr/lib/python3/dist-packages/lammps.py
make[1]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1/debian/build'
debian/rules override_dh_install
make[1]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1'
dh_install -X.gitignore
make[1]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1'
dh_installdocs -a -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-20191120\+dfsg1/debian/build
dh_sphinxdoc -a -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-20191120\+dfsg1/debian/build
dh_sphinxdoc: warning: Sphinx documentation not found
dh_installchangelogs -a -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-20191120\+dfsg1/debian/build
debian/rules override_dh_installexamples
make[1]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1'
dh_installexamples -X.gitignore
make[1]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1'
dh_installman -a -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-20191120\+dfsg1/debian/build
dh_python3 -a -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-20191120\+dfsg1/debian/build
dh_installinit -a -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-20191120\+dfsg1/debian/build
dh_installsystemduser -a -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-20191120\+dfsg1/debian/build
dh_perl -a -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-20191120\+dfsg1/debian/build
dh_link -a -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-20191120\+dfsg1/debian/build
dh_strip_nondeterminism -a -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-20191120\+dfsg1/debian/build
dh_compress -a -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-20191120\+dfsg1/debian/build
dh_fixperms -a -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-20191120\+dfsg1/debian/build
dh_missing -a -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-20191120\+dfsg1/debian/build
debian/rules override_dh_dwz
make[1]: Entering directory '/<<BUILDDIR>>/lammps-20191120+dfsg1'
dh_dwz -Xliblammps.so.0
make[1]: Leaving directory '/<<BUILDDIR>>/lammps-20191120+dfsg1'
dh_strip -a -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-20191120\+dfsg1/debian/build
dh_makeshlibs -a -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-20191120\+dfsg1/debian/build
dh_shlibdeps -a -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-20191120\+dfsg1/debian/build
dpkg-shlibdeps: warning: debian/lammps/usr/bin/lmp contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/lammps/usr/bin/lmp was not linked against libpython3.7m.so.1.0 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/liblammps0/usr/lib/arm-linux-gnueabihf/liblammps.so.0 found in none of the libraries
dh_installdeb -a -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-20191120\+dfsg1/debian/build
dh_gencontrol -a -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-20191120\+dfsg1/debian/build
dpkg-gencontrol: warning: Depends field of package liblammps-dev: substitution variable ${shlibs:Depends} used, but is not defined
dpkg-gencontrol: warning: Depends field of package python3-lammps: substitution variable ${shlibs:Depends} used, but is not defined
dh_md5sums -a -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-20191120\+dfsg1/debian/build
dh_builddeb -a -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-20191120\+dfsg1/debian/build
dpkg-deb: building package 'liblammps0-dbgsym' in '../liblammps0-dbgsym_20191120+dfsg1-2+b1_armhf.deb'.
dpkg-deb: building package 'liblammps-dev' in '../liblammps-dev_20191120+dfsg1-2+b1_armhf.deb'.
dpkg-deb: building package 'lammps' in '../lammps_20191120+dfsg1-2+b1_armhf.deb'.
dpkg-deb: building package 'lammps-dbgsym' in '../lammps-dbgsym_20191120+dfsg1-2+b1_armhf.deb'.
dpkg-deb: building package 'liblammps0' in '../liblammps0_20191120+dfsg1-2+b1_armhf.deb'.
dpkg-deb: building package 'python3-lammps' in '../python3-lammps_20191120+dfsg1-2+b1_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian 2019 test autobuilder <root@raspbian.org> >../lammps_20191120+dfsg1-2+b1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2020-02-03T04:46:31Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
lammps_20191120+dfsg1-2+b1_armhf.changes:
-----------------------------------------
Format: 1.8
Date: Mon, 03 Feb 2020 03:16:28 +0000
Source: lammps (20191120+dfsg1-2)
Binary: lammps lammps-dbgsym liblammps-dev liblammps0 liblammps0-dbgsym python3-lammps
Binary-Only: yes
Architecture: armhf
Version: 20191120+dfsg1-2+b1
Distribution: bullseye-staging
Urgency: low
Maintainer: Raspbian 2019 test autobuilder <root@raspbian.org>
Changed-By: Raspbian 2019 test autobuilder <root@raspbian.org>
Description:
lammps - Molecular Dynamics Simulator
liblammps-dev - Molecular Dynamics Simulator (dev files)
liblammps0 - Molecular Dynamics Simulator (shared library)
python3-lammps - Molecular Dynamics Simulator
Changes:
lammps (20191120+dfsg1-2+b1) bullseye-staging; urgency=low, binary-only=yes
.
* Binary-only non-maintainer upload for armhf; no source changes.
* rebuild due to debcheck failure
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Files:
7a9885aca9b2f75e8a3bf7e079b35a14 31264 debug optional lammps-dbgsym_20191120+dfsg1-2+b1_armhf.deb
100df537698f1a720285aabec930964f 23421 science optional lammps_20191120+dfsg1-2+b1_armhf.buildinfo
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083ae50453994991d155034938442c93 427620 python optional python3-lammps_20191120+dfsg1-2+b1_armhf.deb
+------------------------------------------------------------------------------+
| Buildinfo |
+------------------------------------------------------------------------------+
Format: 1.0
Source: lammps (20191120+dfsg1-2)
Binary: lammps liblammps-dev liblammps0 python3-lammps lammps-doc lammps-data lammps-examples
Architecture: armhf
Version: 20191120+dfsg1-2+b1
Binary-Only-Changes:
lammps (20191120+dfsg1-2+b1) bullseye-staging; urgency=low, binary-only=yes
.
* Binary-only non-maintainer upload for armhf; no source changes.
* rebuild due to debcheck failure
.
-- Raspbian 2019 test autobuilder <root@raspbian.org> Mon, 03 Feb 2020 03:16:28 +0000
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Build-Origin: Raspbian
Build-Architecture: armhf
Build-Date: Mon, 03 Feb 2020 04:46:20 +0000
Build-Path: /<<BUILDDIR>>/lammps-20191120+dfsg1
Installed-Build-Depends:
adduser (= 3.118),
autoconf (= 2.69-11.1),
automake (= 1:1.16.1-4),
autopoint (= 0.19.8.1-10),
autotools-dev (= 20180224.1),
base-files (= 11+rpi1),
base-passwd (= 3.5.47),
bash (= 5.0-5),
binutils (= 2.33.90.20200122-2+rpi1),
binutils-arm-linux-gnueabihf (= 2.33.90.20200122-2+rpi1),
binutils-common (= 2.33.90.20200122-2+rpi1),
bsdmainutils (= 11.1.2),
bsdutils (= 1:2.34-0.1),
build-essential (= 12.8),
bzip2 (= 1.0.8-2),
ca-certificates (= 20190110),
cmake (= 3.15.4-1+rpi1),
cmake-data (= 3.15.4-1+rpi1),
coreutils (= 8.30-3),
cpp (= 4:9.2.1-3.1+rpi1),
cpp-9 (= 9.2.1-25+rpi1),
cython3 (= 0.29.14-0.1),
dash (= 0.5.10.2-6),
debconf (= 1.5.73),
debhelper (= 12.9),
debianutils (= 4.9.1),
default-libmysqlclient-dev (= 1.0.5+b5),
dh-autoreconf (= 19),
dh-python (= 4.20191017),
dh-strip-nondeterminism (= 1.6.3-2),
diffutils (= 1:3.7-3),
docutils-common (= 0.16+dfsg-1),
dpkg (= 1.19.7),
dpkg-dev (= 1.19.7),
dwz (= 0.13-5),
fdisk (= 2.34-0.1),
file (= 1:5.38-4),
findutils (= 4.7.0-1),
fontconfig (= 2.13.1-2),
fontconfig-config (= 2.13.1-2),
fonts-dejavu-core (= 2.37-1),
g++ (= 4:9.2.1-3.1+rpi1),
g++-9 (= 9.2.1-25+rpi1),
gcc (= 4:9.2.1-3.1+rpi1),
gcc-9 (= 9.2.1-25+rpi1),
gcc-9-base (= 9.2.1-25+rpi1),
gdal-data (= 3.0.3+dfsg-1),
gettext (= 0.19.8.1-10),
gettext-base (= 0.19.8.1-10),
gfortran (= 4:9.2.1-3.1+rpi1),
gfortran-9 (= 9.2.1-25+rpi1),
grep (= 3.3-1),
groff-base (= 1.22.4-4),
gzip (= 1.9-3),
hdf5-helpers (= 1.10.4+repack-10),
hostname (= 3.23),
ibverbs-providers (= 27.0-2),
icu-devtools (= 63.2-2),
init-system-helpers (= 1.57),
intltool-debian (= 0.35.0+20060710.5),
iso-codes (= 4.4-1),
libacl1 (= 2.2.53-5),
libaec-dev (= 1.0.4-1),
libaec0 (= 1.0.4-1),
libaom0 (= 1.0.0.errata1-3),
libarchive-zip-perl (= 1.67-1),
libarchive13 (= 3.4.0-1+b1),
libarmadillo-dev (= 1:9.800.4+dfsg-1),
libarmadillo9 (= 1:9.800.4+dfsg-1),
libarpack2 (= 3.7.0-3),
libarpack2-dev (= 3.7.0-3),
libasan5 (= 9.2.1-25+rpi1),
libatomic1 (= 9.2.1-25+rpi1),
libattr1 (= 1:2.4.48-5),
libaudit-common (= 1:2.8.5-2),
libaudit1 (= 1:2.8.5-2+b1),
libavahi-client3 (= 0.7-5),
libavahi-common-data (= 0.7-5),
libavahi-common3 (= 0.7-5),
libavcodec-dev (= 7:4.2.2-1),
libavcodec58 (= 7:4.2.2-1),
libavformat-dev (= 7:4.2.2-1),
libavformat58 (= 7:4.2.2-1),
libavutil-dev (= 7:4.2.2-1),
libavutil56 (= 7:4.2.2-1),
libbinutils (= 2.33.90.20200122-2+rpi1),
libblas-dev (= 3.9.0-1),
libblas3 (= 3.9.0-1),
libblkid1 (= 2.34-0.1),
libbluray2 (= 1:1.1.2-2),
libboost-dev (= 1.67.0.2+b11),
libboost1.67-dev (= 1.67.0-17),
libbrotli1 (= 1.0.7-6),
libbsd0 (= 0.10.0-1),
libbz2-1.0 (= 1.0.8-2),
libc-bin (= 2.29-7+rpi1),
libc-dev-bin (= 2.29-7+rpi1),
libc6 (= 2.29-7+rpi1),
libc6-dev (= 2.29-7+rpi1),
libcairo2 (= 1.16.0-4),
libcap-ng0 (= 0.7.9-2.1),
libcap2 (= 1:2.27-1),
libcap2-bin (= 1:2.27-1),
libcc1-0 (= 9.2.1-25+rpi1),
libcfitsio-dev (= 3.470-3),
libcfitsio8 (= 3.470-3),
libcharls-dev (= 2.0.0+dfsg-1),
libcharls2 (= 2.0.0+dfsg-1),
libchromaprint1 (= 1.4.3-3),
libclang1-8 (= 1:8.0.1-7+rpi1),
libcodec2-0.9 (= 0.9.2-2),
libcom-err2 (= 1.45.5-2),
libcroco3 (= 0.6.13-1),
libcrypt-dev (= 1:4.4.10-10+b5),
libcrypt1 (= 1:4.4.10-10+b5),
libctf-nobfd0 (= 2.33.90.20200122-2+rpi1),
libctf0 (= 2.33.90.20200122-2+rpi1),
libcups2 (= 2.3.1-4),
libcurl3-gnutls (= 7.67.0-2),
libcurl4-gnutls-dev (= 7.67.0-2),
libdap-dev (= 3.20.4-1),
libdap25 (= 3.20.4-1),
libdapclient6v5 (= 3.20.4-1),
libdapserver7v5 (= 3.20.4-1),
libdatrie1 (= 0.2.12-3+b1),
libdb5.3 (= 5.3.28+dfsg1-0.6),
libdbus-1-3 (= 1.12.16-2+b1),
libdebconfclient0 (= 0.250),
libdebhelper-perl (= 12.9),
libdouble-conversion3 (= 3.1.5-5),
libdpkg-perl (= 1.19.7),
libdrm-amdgpu1 (= 2.4.100-4+rpi1),
libdrm-common (= 2.4.100-4+rpi1),
libdrm-nouveau2 (= 2.4.100-4+rpi1),
libdrm-radeon1 (= 2.4.100-4+rpi1),
libdrm2 (= 2.4.100-4+rpi1),
libedit2 (= 3.1-20191231-1),
libegl-dev (= 1.3.0-7),
libegl-mesa0 (= 19.3.2-1),
libegl1 (= 1.3.0-7),
libeigen3-dev (= 3.3.7-1),
libelf1 (= 0.176-1.1),
libepsilon-dev (= 0.9.2+dfsg-4),
libepsilon1 (= 0.9.2+dfsg-4),
libevdev2 (= 1.8.0+dfsg-2),
libevent-2.1-7 (= 2.1.11-stable-1),
libevent-core-2.1-7 (= 2.1.11-stable-1),
libevent-dev (= 2.1.11-stable-1),
libevent-extra-2.1-7 (= 2.1.11-stable-1),
libevent-openssl-2.1-7 (= 2.1.11-stable-1),
libevent-pthreads-2.1-7 (= 2.1.11-stable-1),
libexpat1 (= 2.2.9-1),
libexpat1-dev (= 2.2.9-1),
libfdisk1 (= 2.34-0.1),
libffi7 (= 3.3-3),
libfftw3-bin (= 3.3.8-2),
libfftw3-dev (= 3.3.8-2),
libfftw3-double3 (= 3.3.8-2),
libfftw3-single3 (= 3.3.8-2),
libfile-stripnondeterminism-perl (= 1.6.3-2),
libfontconfig1 (= 2.13.1-2),
libfontconfig1-dev (= 2.13.1-2),
libfreetype-dev (= 2.10.1-2),
libfreetype6 (= 2.10.1-2),
libfreetype6-dev (= 2.10.1-2),
libfreexl-dev (= 1.0.5-3),
libfreexl1 (= 1.0.5-3),
libfribidi0 (= 1.0.7-1.1),
libfyba-dev (= 4.1.1-6),
libfyba0 (= 4.1.1-6),
libgbm1 (= 19.3.2-1),
libgcc-9-dev (= 9.2.1-25+rpi1),
libgcc1 (= 1:9.2.1-25+rpi1),
libgcrypt20 (= 1.8.5-3),
libgdal-dev (= 3.0.3+dfsg-1+b1),
libgdal26 (= 3.0.3+dfsg-1+b1),
libgdbm-compat4 (= 1.18.1-5),
libgdbm6 (= 1.18.1-5),
libgdk-pixbuf2.0-0 (= 2.40.0+dfsg-2+rpi1),
libgdk-pixbuf2.0-common (= 2.40.0+dfsg-2+rpi1),
libgeos-3.8.0 (= 3.8.0-1),
libgeos-c1v5 (= 3.8.0-1),
libgeos-dev (= 3.8.0-1),
libgeotiff-dev (= 1.5.1-2),
libgeotiff5 (= 1.5.1-2),
libgfortran-9-dev (= 9.2.1-25+rpi1),
libgfortran5 (= 9.2.1-25+rpi1),
libgif-dev (= 5.1.9-1),
libgif7 (= 5.1.9-1),
libgl-dev (= 1.3.0-7),
libgl1 (= 1.3.0-7),
libgl1-mesa-dev (= 19.3.2-1),
libgl1-mesa-dri (= 19.3.2-1),
libgl2ps-dev (= 1.4.0+dfsg1-2),
libgl2ps1.4 (= 1.4.0+dfsg1-2),
libglapi-mesa (= 19.3.2-1),
libgles-dev (= 1.3.0-7),
libgles1 (= 1.3.0-7),
libgles2 (= 1.3.0-7),
libglew-dev (= 2.1.0-4),
libglew2.1 (= 2.1.0-4),
libglib2.0-0 (= 2.62.4-1+rpi1),
libglu1-mesa (= 9.0.1-1),
libglu1-mesa-dev (= 9.0.1-1),
libglvnd0 (= 1.3.0-7),
libglx-dev (= 1.3.0-7),
libglx-mesa0 (= 19.3.2-1),
libglx0 (= 1.3.0-7),
libgme0 (= 0.6.2-1),
libgmp-dev (= 2:6.1.2+dfsg-4),
libgmp10 (= 2:6.1.2+dfsg-4),
libgmpxx4ldbl (= 2:6.1.2+dfsg-4),
libgnutls-dane0 (= 3.6.11.1-2),
libgnutls-openssl27 (= 3.6.11.1-2),
libgnutls28-dev (= 3.6.11.1-2),
libgnutls30 (= 3.6.11.1-2),
libgnutlsxx28 (= 3.6.11.1-2),
libgomp1 (= 9.2.1-25+rpi1),
libgpg-error0 (= 1.36-7),
libgraphite2-3 (= 1.3.13-11),
libgsm1 (= 1.0.18-2),
libgssapi-krb5-2 (= 1.17-6+b1),
libgstreamer-plugins-base1.0-0 (= 1.16.2-2),
libgstreamer1.0-0 (= 1.16.2-2),
libgudev-1.0-0 (= 233-1),
libharfbuzz0b (= 2.6.4-1+rpi1),
libhdf4-0-alt (= 4.2.14-1+b6),
libhdf4-alt-dev (= 4.2.14-1+b6),
libhdf5-103 (= 1.10.4+repack-10),
libhdf5-cpp-103 (= 1.10.4+repack-10),
libhdf5-dev (= 1.10.4+repack-10),
libhdf5-mpi-dev (= 1.10.4+repack-10),
libhdf5-openmpi-103 (= 1.10.4+repack-10),
libhdf5-openmpi-dev (= 1.10.4+repack-10),
libhogweed5 (= 3.5.1+really3.5.1-2),
libhwloc-dev (= 2.1.0+dfsg-3+rpi1),
libhwloc-plugins (= 2.1.0+dfsg-3+rpi1),
libhwloc15 (= 2.1.0+dfsg-3+rpi1),
libhyphen0 (= 2.8.8-7),
libibverbs-dev (= 27.0-2),
libibverbs1 (= 27.0-2),
libice-dev (= 2:1.0.9-2),
libice6 (= 2:1.0.9-2),
libicu-dev (= 63.2-2),
libicu63 (= 63.2-2),
libidn2-0 (= 2.2.0-2),
libidn2-dev (= 2.2.0-2),
libinput-bin (= 1.14.3-1),
libinput10 (= 1.14.3-1),
libisl22 (= 0.22-2),
libjbig-dev (= 2.1-3.1+b2),
libjbig0 (= 2.1-3.1+b2),
libjpeg-dev (= 1:1.5.2-2),
libjpeg62-turbo (= 1:1.5.2-2+b1),
libjpeg62-turbo-dev (= 1:1.5.2-2+b1),
libjs-jquery (= 3.3.1~dfsg-3),
libjs-sphinxdoc (= 1.8.5-5),
libjs-underscore (= 1.9.1~dfsg-1),
libjson-c-dev (= 0.13.1+dfsg-6),
libjson-c4 (= 0.13.1+dfsg-6),
libjsoncpp-dev (= 1.7.4-3.1),
libjsoncpp1 (= 1.7.4-3.1),
libk5crypto3 (= 1.17-6+b1),
libkeyutils1 (= 1.6-6),
libkim-api-dev (= 2.1.3-5),
libkim-api2 (= 2.1.3-5),
libkml-dev (= 1.3.0-8),
libkmlbase1 (= 1.3.0-8),
libkmlconvenience1 (= 1.3.0-8),
libkmldom1 (= 1.3.0-8),
libkmlengine1 (= 1.3.0-8),
libkmlregionator1 (= 1.3.0-8),
libkmlxsd1 (= 1.3.0-8),
libkrb5-3 (= 1.17-6+b1),
libkrb5support0 (= 1.17-6+b1),
liblapack-dev (= 3.9.0-1),
liblapack3 (= 3.9.0-1),
liblcms2-2 (= 2.9-3),
libldap-2.4-2 (= 2.4.48+dfsg-1+b2),
libldap-common (= 2.4.48+dfsg-1),
libllvm8 (= 1:8.0.1-7+rpi1),
libllvm9 (= 1:9.0.1-8+rpi1),
libltdl-dev (= 2.4.6-11),
libltdl7 (= 2.4.6-11),
liblz4-1 (= 1.9.2-2),
liblzma-dev (= 5.2.4-1),
liblzma5 (= 5.2.4-1),
libmagic-mgc (= 1:5.38-4),
libmagic1 (= 1:5.38-4),
libmariadb-dev (= 1:10.3.22-1),
libmariadb-dev-compat (= 1:10.3.22-1),
libmariadb3 (= 1:10.3.22-1),
libminizip-dev (= 1.1-8+b1),
libminizip1 (= 1.1-8+b1),
libmount1 (= 2.34-0.1),
libmp3lame0 (= 3.100-3),
libmpc3 (= 1.1.0-1),
libmpdec2 (= 2.4.2-2),
libmpfr6 (= 4.0.2-1),
libmpg123-0 (= 1.25.13-1),
libmtdev1 (= 1.1.5-1.1),
libncurses6 (= 6.1+20191019-1),
libncursesw6 (= 6.1+20191019-1),
libnetcdf-c++4 (= 4.2-11+b1),
libnetcdf-cxx-legacy-dev (= 4.2-11+b1),
libnetcdf-dev (= 1:4.7.3-1),
libnetcdf15 (= 1:4.7.3-1),
libnettle7 (= 3.5.1+really3.5.1-2),
libnghttp2-14 (= 1.40.0-1+b2),
libnl-3-200 (= 3.4.0-1),
libnl-3-dev (= 3.4.0-1),
libnl-route-3-200 (= 3.4.0-1),
libnl-route-3-dev (= 3.4.0-1),
libnspr4 (= 2:4.24-1),
libnss3 (= 2:3.49.1-1),
libodbc1 (= 2.3.6-0.1+b1),
libogdi-dev (= 4.1.0+ds-1),
libogdi4.1 (= 4.1.0+ds-1),
libogg-dev (= 1.3.2-1+b2),
libogg0 (= 1.3.2-1+b2),
libopenjp2-7 (= 2.3.1-1),
libopenjp2-7-dev (= 2.3.1-1),
libopenmpi-dev (= 4.0.2-5+rpi1),
libopenmpi3 (= 4.0.2-5+rpi1),
libopenmpt0 (= 0.4.11-1),
libopus0 (= 1.3-1),
liborc-0.4-0 (= 1:0.4.31-1),
libp11-kit-dev (= 0.23.18.1-2+b1),
libp11-kit0 (= 0.23.18.1-2+b1),
libpam-modules (= 1.3.1-5),
libpam-modules-bin (= 1.3.1-5),
libpam-runtime (= 1.3.1-5),
libpam0g (= 1.3.1-5),
libpango-1.0-0 (= 1.42.4-7+b1),
libpangocairo-1.0-0 (= 1.42.4-7+b1),
libpangoft2-1.0-0 (= 1.42.4-7+b1),
libpciaccess0 (= 0.14-1),
libpcre16-3 (= 2:8.39-12),
libpcre2-16-0 (= 10.34-7),
libpcre2-8-0 (= 10.34-7),
libpcre3 (= 2:8.39-12),
libpcre3-dev (= 2:8.39-12),
libpcre32-3 (= 2:8.39-12),
libpcrecpp0v5 (= 2:8.39-12),
libperl5.30 (= 5.30.0-9),
libpipeline1 (= 1.5.2-2),
libpixman-1-0 (= 0.36.0-1),
libpmix2 (= 3.1.4-1+b1),
libpng-dev (= 1.6.37-1),
libpng16-16 (= 1.6.37-1),
libpoppler-dev (= 0.71.0-6),
libpoppler-private-dev (= 0.71.0-6),
libpoppler82 (= 0.71.0-6),
libpopt0 (= 1.16-14),
libpq-dev (= 12.1-2),
libpq5 (= 12.1-2),
libprocps7 (= 2:3.3.15-2),
libproj-dev (= 6.3.0-1),
libproj15 (= 6.3.0-1),
libpsl5 (= 0.20.2-2),
libpthread-stubs0-dev (= 0.4-1),
libpython3-all-dev (= 3.7.5-3),
libpython3-dev (= 3.7.5-3),
libpython3-stdlib (= 3.7.5-3),
libpython3.7 (= 3.7.6-1+b1),
libpython3.7-dev (= 3.7.6-1+b1),
libpython3.7-minimal (= 3.7.6-1+b1),
libpython3.7-stdlib (= 3.7.6-1+b1),
libpython3.8 (= 3.8.1-2+b1),
libpython3.8-dev (= 3.8.1-2+b1),
libpython3.8-minimal (= 3.8.1-2+b1),
libpython3.8-stdlib (= 3.8.1-2+b1),
libqhull-dev (= 2015.2-4),
libqhull-r7 (= 2015.2-4),
libqhull7 (= 2015.2-4),
libqt5concurrent5 (= 5.12.5+dfsg-7+rpi1),
libqt5core5a (= 5.12.5+dfsg-7+rpi1),
libqt5dbus5 (= 5.12.5+dfsg-7+rpi1),
libqt5designer5 (= 5.12.5-2),
libqt5designercomponents5 (= 5.12.5-2),
libqt5gui5 (= 5.12.5+dfsg-7+rpi1),
libqt5help5 (= 5.12.5-2),
libqt5network5 (= 5.12.5+dfsg-7+rpi1),
libqt5opengl5 (= 5.12.5+dfsg-7+rpi1),
libqt5opengl5-dev (= 5.12.5+dfsg-7+rpi1),
libqt5positioning5 (= 5.12.5+dfsg-2),
libqt5printsupport5 (= 5.12.5+dfsg-7+rpi1),
libqt5qml5 (= 5.12.5-5),
libqt5quick5 (= 5.12.5-5),
libqt5quickparticles5 (= 5.12.5-5),
libqt5quickshapes5 (= 5.12.5-5),
libqt5quicktest5 (= 5.12.5-5),
libqt5quickwidgets5 (= 5.12.5-5),
libqt5sensors5 (= 5.12.5-2),
libqt5sql5 (= 5.12.5+dfsg-7+rpi1),
libqt5sql5-sqlite (= 5.12.5+dfsg-7+rpi1),
libqt5test5 (= 5.12.5+dfsg-7+rpi1),
libqt5webchannel5 (= 5.12.5-2),
libqt5webkit5 (= 5.212.0~alpha3-6+rpi1),
libqt5webkit5-dev (= 5.212.0~alpha3-6+rpi1),
libqt5widgets5 (= 5.12.5+dfsg-7+rpi1),
libqt5x11extras5 (= 5.12.5-1),
libqt5xml5 (= 5.12.5+dfsg-7+rpi1),
libreadline8 (= 8.0-3),
librhash0 (= 1.3.9-1),
librsvg2-2 (= 2.46.4-1),
librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b1),
libsasl2-2 (= 2.1.27+dfsg-2),
libsasl2-modules-db (= 2.1.27+dfsg-2),
libseccomp2 (= 2.4.2-2+rpi1),
libselinux1 (= 3.0-1),
libsemanage-common (= 3.0-1),
libsemanage1 (= 3.0-1),
libsensors-config (= 1:3.6.0-2),
libsensors5 (= 1:3.6.0-2),
libsepol1 (= 3.0-1),
libshine3 (= 3.1.1-2+b1),
libsigsegv2 (= 2.12-2),
libsm-dev (= 2:1.2.3-1),
libsm6 (= 2:1.2.3-1),
libsmartcols1 (= 2.34-0.1),
libsnappy1v5 (= 1.1.8-1),
libsodium23 (= 1.0.18-1),
libsoxr0 (= 0.1.3-1+rpi1),
libspatialite-dev (= 4.3.0a-6+b2),
libspatialite7 (= 4.3.0a-6+b2),
libspeex1 (= 1.2~rc1.2-1.1),
libsqlite3-0 (= 3.31.0+really3.30.1+fossil191229-1),
libsqlite3-dev (= 3.31.0+really3.30.1+fossil191229-1),
libssh-gcrypt-4 (= 0.9.3-2),
libssh2-1 (= 1.8.0-2.1),
libssl1.1 (= 1.1.1d-2),
libstdc++-9-dev (= 9.2.1-25+rpi1),
libstdc++6 (= 9.2.1-25+rpi1),
libsub-override-perl (= 0.09-2),
libsuperlu-dev (= 5.2.1+dfsg1-4),
libsuperlu5 (= 5.2.1+dfsg1-4),
libswresample-dev (= 7:4.2.2-1),
libswresample3 (= 7:4.2.2-1),
libswscale-dev (= 7:4.2.2-1),
libswscale5 (= 7:4.2.2-1),
libsymspg-dev (= 1.14.1-5),
libsymspg1 (= 1.14.1-5),
libsystemd0 (= 244.1-1+rpi1),
libsz2 (= 1.0.4-1),
libtasn1-6 (= 4.15.0-2),
libtasn1-6-dev (= 4.15.0-2),
libtcl8.6 (= 8.6.10+dfsg-1),
libthai-data (= 0.1.28-3),
libthai0 (= 0.1.28-3),
libtheora-dev (= 1.1.1+dfsg.1-15),
libtheora0 (= 1.1.1+dfsg.1-15),
libtiff-dev (= 4.1.0+git191117-2),
libtiff5 (= 4.1.0+git191117-2),
libtiffxx5 (= 4.1.0+git191117-2),
libtinfo5 (= 6.1+20191019-1),
libtinfo6 (= 6.1+20191019-1),
libtk8.6 (= 8.6.10-1),
libtool (= 2.4.6-11),
libtwolame0 (= 0.4.0-2),
libubsan1 (= 9.2.1-25+rpi1),
libuchardet0 (= 0.0.6-3),
libudev1 (= 244.1-1+rpi1),
libunbound8 (= 1.9.6-1),
libunistring2 (= 0.9.10-2),
liburiparser-dev (= 0.9.3-2),
liburiparser1 (= 0.9.3-2),
libuuid1 (= 2.34-0.1),
libuv1 (= 1.33.1-2),
libva-drm2 (= 2.6.1-1),
libva-x11-2 (= 2.6.1-1),
libva2 (= 2.6.1-1),
libvdpau1 (= 1.3-1+b3),
libvorbis0a (= 1.3.6-2),
libvorbisenc2 (= 1.3.6-2),
libvorbisfile3 (= 1.3.6-2),
libvoro++1 (= 0.4.6+dfsg1-3),
libvpx6 (= 1.8.2-1),
libvtk7-dev (= 7.1.1+dfsg2-1+b2),
libvtk7-java (= 7.1.1+dfsg2-1+b2),
libvtk7-jni (= 7.1.1+dfsg2-1+b2),
libvtk7-qt-dev (= 7.1.1+dfsg2-1+b2),
libvtk7.1p (= 7.1.1+dfsg2-1+b2),
libvtk7.1p-qt (= 7.1.1+dfsg2-1+b2),
libvulkan-dev (= 1.1.126.0-2),
libvulkan1 (= 1.1.126.0-2),
libwacom-common (= 1.1-2),
libwacom2 (= 1.1-2),
libwavpack1 (= 5.2.0-1),
libwayland-client0 (= 1.17.0-1+b1),
libwayland-server0 (= 1.17.0-1+b1),
libwebp-dev (= 0.6.1-2),
libwebp6 (= 0.6.1-2),
libwebpdemux2 (= 0.6.1-2),
libwebpmux3 (= 0.6.1-2),
libwoff1 (= 1.0.2-1),
libx11-6 (= 2:1.6.8-1),
libx11-data (= 2:1.6.8-1),
libx11-dev (= 2:1.6.8-1),
libx11-xcb1 (= 2:1.6.8-1),
libx264-155 (= 2:0.155.2917+git0a84d98-2+rpi1),
libx265-179 (= 3.2.1-1),
libxau-dev (= 1:1.0.8-1+b2),
libxau6 (= 1:1.0.8-1+b2),
libxcb-dri2-0 (= 1.13.1-2),
libxcb-dri3-0 (= 1.13.1-2),
libxcb-glx0 (= 1.13.1-2),
libxcb-icccm4 (= 0.4.1-1.1),
libxcb-image0 (= 0.4.0-1+b2),
libxcb-keysyms1 (= 0.4.0-1+b2),
libxcb-present0 (= 1.13.1-2),
libxcb-randr0 (= 1.13.1-2),
libxcb-render-util0 (= 0.3.9-1+b1),
libxcb-render0 (= 1.13.1-2),
libxcb-shape0 (= 1.13.1-2),
libxcb-shm0 (= 1.13.1-2),
libxcb-sync1 (= 1.13.1-2),
libxcb-util0 (= 0.3.8-3+b2),
libxcb-xfixes0 (= 1.13.1-2),
libxcb-xinerama0 (= 1.13.1-2),
libxcb-xinput0 (= 1.13.1-2),
libxcb-xkb1 (= 1.13.1-2),
libxcb1 (= 1.13.1-2),
libxcb1-dev (= 1.13.1-2),
libxdamage1 (= 1:1.1.5-1),
libxdmcp-dev (= 1:1.1.2-3),
libxdmcp6 (= 1:1.1.2-3),
libxerces-c-dev (= 3.2.2+debian-1+b1),
libxerces-c3.2 (= 3.2.2+debian-1+b1),
libxext-dev (= 2:1.3.3-1+b2),
libxext6 (= 2:1.3.3-1+b2),
libxfixes3 (= 1:5.0.3-1),
libxft-dev (= 2.3.2-2),
libxft2 (= 2.3.2-2),
libxkbcommon-x11-0 (= 0.9.1-1),
libxkbcommon0 (= 0.9.1-1),
libxml2 (= 2.9.4+dfsg1-8),
libxml2-dev (= 2.9.4+dfsg1-8),
libxnvctrl0 (= 435.21-1),
libxrender-dev (= 1:0.9.10-1),
libxrender1 (= 1:0.9.10-1),
libxshmfence1 (= 1.3-1),
libxslt1.1 (= 1.1.32-2.2),
libxss-dev (= 1:1.2.3-1),
libxss1 (= 1:1.2.3-1),
libxt-dev (= 1:1.1.5-1+b3),
libxt6 (= 1:1.1.5-1+b3),
libxvidcore4 (= 2:1.3.6-1),
libxxf86vm1 (= 1:1.1.4-1+b2),
libz3-4 (= 4.8.7-4),
libzstd-dev (= 1.4.4+dfsg-1+rpi1),
libzstd1 (= 1.4.4+dfsg-1+rpi1),
libzvbi-common (= 0.2.35-16),
libzvbi0 (= 0.2.35-16),
linux-libc-dev (= 5.2.17-1+rpi1+b2),
login (= 1:4.8-1),
lsb-base (= 11.1.0+rpi1),
m4 (= 1.4.18-4),
make (= 4.2.1-1.2),
man-db (= 2.9.0-2),
mariadb-common (= 1:10.3.22-1),
mawk (= 1.3.4.20200120-1),
mime-support (= 3.64),
mpi-default-bin (= 1.13),
mpi-default-dev (= 1.13),
mysql-common (= 5.8+1.0.5),
ncurses-base (= 6.1+20191019-1),
ncurses-bin (= 6.1+20191019-1),
nettle-dev (= 3.5.1+really3.5.1-2),
ocl-icd-libopencl1 (= 2.2.12-2),
ocl-icd-opencl-dev (= 2.2.12-2),
odbcinst (= 2.3.6-0.1+b1),
odbcinst1debian2 (= 2.3.6-0.1+b1),
opencl-c-headers (= 2.2~2019.08.06-g0d5f18c-1),
openmpi-bin (= 4.0.2-5+rpi1),
openmpi-common (= 4.0.2-5+rpi1),
openssh-client (= 1:8.1p1-5),
openssl (= 1.1.1d-2),
passwd (= 1:4.8-1),
patch (= 2.7.6-6),
perl (= 5.30.0-9),
perl-base (= 5.30.0-9),
perl-modules-5.30 (= 5.30.0-9),
pkg-config (= 0.29-6),
po-debconf (= 1.0.21),
procps (= 2:3.3.15-2),
proj-data (= 6.3.0-1),
python-babel-localedata (= 2.6.0+dfsg.1-1),
python3 (= 3.7.5-3),
python3-alabaster (= 0.7.8-1),
python3-all (= 3.7.5-3),
python3-all-dev (= 3.7.5-3),
python3-asn1crypto (= 0.24.0-1),
python3-attr (= 18.2.0-1),
python3-autobahn (= 17.10.1+dfsg1-6+rvt),
python3-automat (= 0.6.0-1),
python3-babel (= 2.6.0+dfsg.1-1),
python3-cbor (= 1.0.0-1.1),
python3-certifi (= 2019.11.28-1),
python3-cffi-backend (= 1.13.2-1+b2),
python3-chardet (= 3.0.4-4),
python3-constantly (= 15.1.0-1),
python3-cryptography (= 2.6.1-4),
python3-dev (= 3.7.5-3),
python3-distutils (= 3.8.0-1),
python3-docutils (= 0.16+dfsg-1),
python3-hyperlink (= 19.0.0-1),
python3-idna (= 2.6-2),
python3-imagesize (= 1.2.0-1),
python3-incremental (= 16.10.1-3.1),
python3-jinja2 (= 2.10.1-1),
python3-lib2to3 (= 3.8.0-1),
python3-lz4 (= 3.0.2+dfsg-1),
python3-markupsafe (= 1.1.0-1+b1),
python3-minimal (= 3.7.5-3),
python3-mpi4py (= 3.0.3-4),
python3-nacl (= 1.3.0-4),
python3-openssl (= 19.0.0-1),
python3-packaging (= 19.1-2),
python3-pkg-resources (= 44.0.0-1),
python3-pyasn1 (= 0.4.2-3),
python3-pyasn1-modules (= 0.2.1-0.2),
python3-pygments (= 2.3.1+dfsg-1),
python3-pyparsing (= 2.4.2-1),
python3-pyqrcode (= 1.2.1-4),
python3-requests (= 2.22.0-2),
python3-roman (= 2.0.0-3),
python3-service-identity (= 18.1.0-5),
python3-six (= 1.14.0-2),
python3-snappy (= 0.5.3-1.1),
python3-sphinx (= 1.8.5-5),
python3-trie (= 0.2+ds-2),
python3-twisted (= 18.9.0-3),
python3-twisted-bin (= 18.9.0-3),
python3-txaio (= 2.10.0-2),
python3-tz (= 2019.3-1),
python3-u-msgpack (= 2.1-1),
python3-ubjson (= 0.14.0-2),
python3-urllib3 (= 1.25.6-5),
python3-vtk7 (= 7.1.1+dfsg2-1+b2),
python3-wsaccel (= 0.6.2-2+rpi1),
python3-zope.interface (= 4.6.0-4),
python3.7 (= 3.7.6-1+b1),
python3.7-dev (= 3.7.6-1+b1),
python3.7-minimal (= 3.7.6-1+b1),
python3.8 (= 3.8.1-2+b1),
python3.8-dev (= 3.8.1-2+b1),
python3.8-minimal (= 3.8.1-2+b1),
qdoc-qt5 (= 5.12.5-2),
qhelpgenerator-qt5 (= 5.12.5-2),
qt5-assistant (= 5.12.5-2),
qt5-qmake (= 5.12.5+dfsg-7+rpi1),
qt5-qmake-bin (= 5.12.5+dfsg-7+rpi1),
qt5-qmltooling-plugins (= 5.12.5-5),
qtattributionsscanner-qt5 (= 5.12.5-2),
qtbase5-dev (= 5.12.5+dfsg-7+rpi1),
qtbase5-dev-tools (= 5.12.5+dfsg-7+rpi1),
qtchooser (= 66-2),
qtdeclarative5-dev (= 5.12.5-5),
qtdeclarative5-dev-tools (= 5.12.5-5),
qttools5-dev (= 5.12.5-2),
qttools5-dev-tools (= 5.12.5-2),
qttools5-private-dev (= 5.12.5-2),
readline-common (= 8.0-3),
sed (= 4.7-1),
sensible-utils (= 0.0.12+nmu1),
sgml-base (= 1.29.1),
shared-mime-info (= 1.10-1),
sphinx-common (= 1.8.5-5),
sysvinit-utils (= 2.96-2.1),
tar (= 1.30+dfsg-6),
tcl (= 8.6.9+1),
tcl-dev (= 8.6.9+1),
tcl-vtk7 (= 7.1.1+dfsg2-1+b2),
tcl8.6 (= 8.6.10+dfsg-1),
tcl8.6-dev (= 8.6.10+dfsg-1),
tk (= 8.6.9+1),
tk-dev (= 8.6.9+1),
tk8.6 (= 8.6.10-1),
tk8.6-dev (= 8.6.10-1),
tzdata (= 2019c-3),
ucf (= 3.0038+nmu1),
unixodbc-dev (= 2.3.6-0.1+b1),
util-linux (= 2.34-0.1),
uuid-dev (= 2.34-0.1),
voro++-dev (= 0.4.6+dfsg1-3),
vtk7 (= 7.1.1+dfsg2-1+b2),
x11-common (= 1:7.7+20),
x11proto-core-dev (= 2018.4-4),
x11proto-dev (= 2018.4-4),
x11proto-scrnsaver-dev (= 2018.4-4),
x11proto-xext-dev (= 2018.4-4),
xkb-data (= 2.26-2),
xml-core (= 0.18+nmu1),
xorg-sgml-doctools (= 1:1.11-1),
xtrans-dev (= 1.3.5-1),
xz-utils (= 5.2.4-1),
zlib1g (= 1:1.2.11.dfsg-1),
zlib1g-dev (= 1:1.2.11.dfsg-1)
Environment:
DEB_BUILD_OPTIONS="parallel=4"
LANG="en_GB.UTF-8"
LC_ALL="POSIX"
SOURCE_DATE_EPOCH="1580699788"
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
lammps-dbgsym_20191120+dfsg1-2+b1_armhf.deb
-------------------------------------------
new Debian package, version 2.0.
size 31264 bytes: control archive=544 bytes.
415 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: lammps-dbgsym
Source: lammps (20191120+dfsg1-2)
Version: 20191120+dfsg1-2+b1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
Installed-Size: 44
Depends: lammps (= 20191120+dfsg1-2+b1)
Section: debug
Priority: optional
Description: debug symbols for lammps
Build-Ids: 90648b8bdf4ca1e964c9dc34679394beb19fea23
drwxr-xr-x root/root 0 2020-02-03 03:16 ./
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/lib/
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/lib/debug/
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/lib/debug/.build-id/90/
-rw-r--r-- root/root 33900 2020-02-03 03:16 ./usr/lib/debug/.build-id/90/648b8bdf4ca1e964c9dc34679394beb19fea23.debug
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/share/
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/share/doc/
lrwxrwxrwx root/root 0 2020-02-03 03:16 ./usr/share/doc/lammps-dbgsym -> lammps
lammps_20191120+dfsg1-2+b1_armhf.deb
------------------------------------
new Debian package, version 2.0.
size 17520 bytes: control archive=1192 bytes.
51 bytes, 2 lines conffiles
1201 bytes, 24 lines control
399 bytes, 6 lines md5sums
Package: lammps
Source: lammps (20191120+dfsg1-2)
Version: 20191120+dfsg1-2+b1
Architecture: armhf
Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
Installed-Size: 46
Depends: lammps-data, libc6 (>= 2.4), libfftw3-double3 (>= 3.3.5), liblammps0 (>= 20191120+dfsg1), libopenmpi3 (>= 4.0.2), libpython3.7 (>= 3.7.0), libstdc++6 (>= 5), mpi-default-bin
Recommends: lammps-doc
Suggests: python3, openkim-models
Section: science
Priority: optional
Homepage: https://lammps.sandia.gov/
Description: Molecular Dynamics Simulator
LAMMPS is a classical molecular dynamics code, and an acronym for Large-scale
Atomic/Molecular Massively Parallel Simulator.
.
LAMMPS has potentials for soft materials (biomolecules, polymers) and
solid-state materials (metals, semiconductors) and coarse-grained or
mesoscopic systems. It can be used to model atoms or, more generically, as a
parallel particle simulator at the atomic, meso, or continuum scale.
.
LAMMPS runs on single processors or in parallel using message-passing
techniques and a spatial-decomposition of the simulation domain. The code is
designed to be easy to modify or extend with new functionality.
drwxr-xr-x root/root 0 2020-02-03 03:16 ./
drwxr-xr-x root/root 0 2020-02-03 03:16 ./etc/
drwxr-xr-x root/root 0 2020-02-03 03:16 ./etc/profile.d/
-rw-r--r-- root/root 266 2020-02-03 03:16 ./etc/profile.d/lammps.csh
-rw-r--r-- root/root 267 2020-02-03 03:16 ./etc/profile.d/lammps.sh
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/
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drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/share/
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-rw-r--r-- root/root 224 2020-02-03 03:16 ./usr/share/doc/lammps/changelog.Debian.armhf.gz
-rw-r--r-- root/root 3902 2020-02-03 03:16 ./usr/share/doc/lammps/changelog.Debian.gz
-rw-r--r-- root/root 14935 2020-01-15 20:46 ./usr/share/doc/lammps/copyright
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/share/man/
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/share/man/man1/
-rw-r--r-- root/root 4255 2020-02-03 03:16 ./usr/share/man/man1/lmp.1.gz
liblammps-dev_20191120+dfsg1-2+b1_armhf.deb
-------------------------------------------
new Debian package, version 2.0.
size 53268 bytes: control archive=1972 bytes.
1177 bytes, 26 lines control
2406 bytes, 37 lines md5sums
Package: liblammps-dev
Source: lammps (20191120+dfsg1-2)
Version: 20191120+dfsg1-2+b1
Architecture: armhf
Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
Installed-Size: 274
Depends: liblammps0 (= 20191120+dfsg1-2+b1), mpi-default-dev
Recommends: lammps-doc
Section: science
Priority: optional
Homepage: https://lammps.sandia.gov/
Description: Molecular Dynamics Simulator (dev files)
LAMMPS is a classical molecular dynamics code, and an acronym for Large-scale
Atomic/Molecular Massively Parallel Simulator.
.
LAMMPS has potentials for soft materials (biomolecules, polymers) and
solid-state materials (metals, semiconductors) and coarse-grained or
mesoscopic systems. It can be used to model atoms or, more generically, as a
parallel particle simulator at the atomic, meso, or continuum scale.
.
LAMMPS runs on single processors or in parallel using message-passing
techniques and a spatial-decomposition of the simulation domain. The code is
designed to be easy to modify or extend with new functionality.
.
This package contains development files and headers to build applications
using the LAMMPS shared library.
drwxr-xr-x root/root 0 2020-02-03 03:16 ./
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/include/
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-rw-r--r-- root/root 2842 2019-11-20 17:04 ./usr/include/lammps/angle.h
-rw-r--r-- root/root 15223 2019-11-20 17:04 ./usr/include/lammps/atom.h
-rw-r--r-- root/root 3146 2019-11-20 17:04 ./usr/include/lammps/bond.h
-rw-r--r-- root/root 1382 2019-11-20 17:04 ./usr/include/lammps/citeme.h
-rw-r--r-- root/root 10224 2019-11-20 17:04 ./usr/include/lammps/comm.h
-rw-r--r-- root/root 7631 2019-11-20 17:04 ./usr/include/lammps/compute.h
-rw-r--r-- root/root 2848 2019-11-20 17:04 ./usr/include/lammps/dihedral.h
-rw-r--r-- root/root 11251 2019-11-20 17:04 ./usr/include/lammps/domain.h
-rw-r--r-- root/root 1574 2019-11-20 17:04 ./usr/include/lammps/error.h
-rw-r--r-- root/root 12344 2019-11-20 17:04 ./usr/include/lammps/fix.h
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-rw-r--r-- root/root 11213 2019-11-20 17:04 ./usr/include/lammps/input.h
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-rw-r--r-- root/root 3540 2019-11-20 17:04 ./usr/include/lammps/lattice.h
-rw-r--r-- root/root 4766 2019-11-20 17:04 ./usr/include/lammps/library.h
-rw-r--r-- root/root 3491 2019-11-20 17:04 ./usr/include/lammps/lmppython.h
-rw-r--r-- root/root 21968 2019-11-20 17:04 ./usr/include/lammps/memory.h
-rw-r--r-- root/root 8109 2019-11-20 17:04 ./usr/include/lammps/modify.h
-rw-r--r-- root/root 4843 2019-11-20 17:04 ./usr/include/lammps/neigh_list.h
-rw-r--r-- root/root 14929 2019-11-20 17:04 ./usr/include/lammps/neighbor.h
-rw-r--r-- root/root 6487 2019-11-20 17:04 ./usr/include/lammps/output.h
-rw-r--r-- root/root 13890 2019-11-20 17:04 ./usr/include/lammps/pair.h
-rw-r--r-- root/root 2713 2019-11-20 17:04 ./usr/include/lammps/pointers.h
-rw-r--r-- root/root 5272 2019-11-20 17:04 ./usr/include/lammps/region.h
-rw-r--r-- root/root 3531 2019-11-20 17:04 ./usr/include/lammps/timer.h
-rw-r--r-- root/root 2319 2019-11-20 17:04 ./usr/include/lammps/universe.h
-rw-r--r-- root/root 3728 2019-11-20 17:04 ./usr/include/lammps/update.h
-rw-r--r-- root/root 13616 2019-11-20 17:04 ./usr/include/lammps/variable.h
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/lib/
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/lib/arm-linux-gnueabihf/
lrwxrwxrwx root/root 0 2020-02-03 03:16 ./usr/lib/arm-linux-gnueabihf/liblammps.so -> liblammps.so.0
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/lib/arm-linux-gnueabihf/pkgconfig/
-rw-r--r-- root/root 1070 2020-02-03 03:16 ./usr/lib/arm-linux-gnueabihf/pkgconfig/liblammps.pc
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/share/
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/share/cmake/
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/share/cmake/Modules/
-rw-r--r-- root/root 1978 2020-02-03 03:16 ./usr/share/cmake/Modules/FindLAMMPS.cmake
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/share/doc/
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/share/doc/liblammps-dev/
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-rw-r--r-- root/root 224 2020-02-03 03:16 ./usr/share/doc/liblammps-dev/changelog.Debian.armhf.gz
-rw-r--r-- root/root 3902 2020-02-03 03:16 ./usr/share/doc/liblammps-dev/changelog.Debian.gz
-rw-r--r-- root/root 14935 2020-01-15 20:46 ./usr/share/doc/liblammps-dev/copyright
liblammps0-dbgsym_20191120+dfsg1-2+b1_armhf.deb
-----------------------------------------------
new Debian package, version 2.0.
size 80094720 bytes: control archive=564 bytes.
447 bytes, 13 lines control
106 bytes, 1 lines md5sums
Package: liblammps0-dbgsym
Source: lammps (20191120+dfsg1-2)
Version: 20191120+dfsg1-2+b1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
Installed-Size: 82421
Depends: liblammps0 (= 20191120+dfsg1-2+b1)
Section: debug
Priority: optional
Multi-Arch: same
Description: debug symbols for liblammps0
Build-Ids: 474ebf455599207a3ede160c0462ca003100889a
drwxr-xr-x root/root 0 2020-02-03 03:16 ./
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/lib/
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/lib/debug/
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/lib/debug/.build-id/
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drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/share/doc/
lrwxrwxrwx root/root 0 2020-02-03 03:16 ./usr/share/doc/liblammps0-dbgsym -> liblammps0
liblammps0_20191120+dfsg1-2+b1_armhf.deb
----------------------------------------
new Debian package, version 2.0.
size 5179304 bytes: control archive=1408 bytes.
1603 bytes, 25 lines control
384 bytes, 5 lines md5sums
43 bytes, 1 lines shlibs
65 bytes, 2 lines triggers
Package: liblammps0
Source: lammps (20191120+dfsg1-2)
Version: 20191120+dfsg1-2+b1
Architecture: armhf
Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
Installed-Size: 22023
Depends: libblas3 | libblas.so.3, libc6 (>= 2.29), libcurl3-gnutls (>= 7.16.2), libfftw3-double3 (>= 3.3.5), libgcc1 (>= 1:4.0), libhdf5-openmpi-103 (>= 1.8.14), libjpeg62-turbo (>= 1.3.1), libkim-api2 (>= 2.1.3), liblapack3 | liblapack.so.3, libnetcdf15 (>= 4.0.1), libopenmpi3 (>= 4.0.2), libpng16-16 (>= 1.6.2-1), libpython3.8 (>= 3.8.0~a1), libstdc++6 (>= 9), libvoro++1 (>= 0.4.6), libvtk7.1p, ocl-icd-libopencl1 | libopencl1, ocl-icd-libopencl1 (>= 1.0) | libopencl-1.2-1, ocl-icd-libopencl1 (>= 2.2.0) | libopencl-2.0-1, zlib1g (>= 1:1.1.4)
Section: science
Priority: optional
Multi-Arch: same
Homepage: https://lammps.sandia.gov/
Description: Molecular Dynamics Simulator (shared library)
LAMMPS is a classical molecular dynamics code, and an acronym for Large-scale
Atomic/Molecular Massively Parallel Simulator.
.
LAMMPS has potentials for soft materials (biomolecules, polymers) and
solid-state materials (metals, semiconductors) and coarse-grained or
mesoscopic systems. It can be used to model atoms or, more generically, as a
parallel particle simulator at the atomic, meso, or continuum scale.
.
LAMMPS runs on single processors or in parallel using message-passing
techniques and a spatial-decomposition of the simulation domain. The code is
designed to be easy to modify or extend with new functionality.
.
This package provides the LAMMPS shared library.
drwxr-xr-x root/root 0 2020-02-03 03:16 ./
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/lib/
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/lib/arm-linux-gnueabihf/
-rw-r--r-- root/root 22519232 2020-02-03 03:16 ./usr/lib/arm-linux-gnueabihf/liblammps.so.0
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/share/
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-rw-r--r-- root/root 214 2018-09-05 21:13 ./usr/share/doc/liblammps0/NEWS.Debian.gz
-rw-r--r-- root/root 224 2020-02-03 03:16 ./usr/share/doc/liblammps0/changelog.Debian.armhf.gz
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-rw-r--r-- root/root 14935 2020-01-15 20:46 ./usr/share/doc/liblammps0/copyright
python3-lammps_20191120+dfsg1-2+b1_armhf.deb
--------------------------------------------
new Debian package, version 2.0.
size 427620 bytes: control archive=2400 bytes.
1114 bytes, 25 lines control
3827 bytes, 44 lines md5sums
254 bytes, 12 lines * postinst #!/bin/sh
403 bytes, 12 lines * prerm #!/bin/sh
Package: python3-lammps
Source: lammps (20191120+dfsg1-2)
Version: 20191120+dfsg1-2+b1
Architecture: armhf
Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
Installed-Size: 815
Depends: liblammps0, python3:any, mpi-default-bin
Recommends: python3-mpi4py, lammps-doc
Section: python
Priority: optional
Homepage: https://lammps.sandia.gov/
Description: Molecular Dynamics Simulator
LAMMPS is a classical molecular dynamics code, and an acronym for Large-scale
Atomic/Molecular Massively Parallel Simulator.
.
LAMMPS has potentials for soft materials (biomolecules, polymers) and
solid-state materials (metals, semiconductors) and coarse-grained or
mesoscopic systems. It can be used to model atoms or, more generically, as a
parallel particle simulator at the atomic, meso, or continuum scale.
.
LAMMPS runs on single processors or in parallel using message-passing
techniques and a spatial-decomposition of the simulation domain. The code is
designed to be easy to modify or extend with new functionality.
.
This package provides the Python module for LAMMPS.
drwxr-xr-x root/root 0 2020-02-03 03:16 ./
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/lib/
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/lib/python3/
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/lib/python3/dist-packages/
-rw-r--r-- root/root 38632 2020-02-03 03:16 ./usr/lib/python3/dist-packages/lammps.py
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drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/share/doc/
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/share/doc/python3-lammps/
-rw-r--r-- root/root 214 2018-09-05 21:13 ./usr/share/doc/python3-lammps/NEWS.Debian.gz
-rw-r--r-- root/root 224 2020-02-03 03:16 ./usr/share/doc/python3-lammps/changelog.Debian.armhf.gz
-rw-r--r-- root/root 3902 2020-02-03 03:16 ./usr/share/doc/python3-lammps/changelog.Debian.gz
-rw-r--r-- root/root 14935 2020-01-15 20:46 ./usr/share/doc/python3-lammps/copyright
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/share/doc/python3-lammps/examples/
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drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/share/doc/python3-lammps/examples/pizza/
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-rw-r--r-- root/root 12703 2019-11-20 17:04 ./usr/share/doc/python3-lammps/examples/pizza/gnu.py
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-rw-r--r-- root/root 547 2019-11-20 17:04 ./usr/share/doc/python3-lammps/examples/pylammps/README
drwxr-xr-x root/root 0 2020-02-03 03:16 ./usr/share/doc/python3-lammps/examples/pylammps/dihedrals/
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-rw-r--r-- root/root 9845 2019-11-20 17:04 ./usr/share/doc/python3-lammps/examples/pylammps/interface_usage.ipynb
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drwxr-xr-x root/root 0 2019-11-20 17:04 ./usr/share/doc/python3-lammps/examples/pylammps/montecarlo/
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+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build Type: any
Build-Space: 1837740
Build-Time: 5402
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 3059
Job: lammps_20191120+dfsg1-2
Machine Architecture: armhf
Package: lammps
Package-Time: 8581
Source-Version: 20191120+dfsg1-2
Space: 1837740
Status: successful
Version: 20191120+dfsg1-2+b1
--------------------------------------------------------------------------------
Finished at 2020-02-03T04:46:31Z
Build needed 02:23:01, 1837740k disk space