Raspbian Package Auto-Building

Build log for lammps (0~20181211.gitad1b1897d+dfsg1-2+b1) on armhf

lammps → 0~20181211.gitad1b1897d+dfsg1-2+b1 → armhf → 2019-09-07 09:00:27 

sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testbuildd

+==============================================================================+
| lammps 0~20181211.gitad1b1897d+dfsg1-2+b1 (armhf) Sat, 07 Sep 2019 06:39:35 +0000 |
+==============================================================================+

Package: lammps
Version: 0~20181211.gitad1b1897d+dfsg1-2+b1
Source Version: 0~20181211.gitad1b1897d+dfsg1-2
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-2842f677-552a-4fd3-83a0-69ab2123955d' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.5 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [13.0 MB]
Fetched 24.5 MB in 31s (787 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'lammps' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/science-team/lammps.git
Please use:
git clone https://salsa.debian.org/science-team/lammps.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 81.6 MB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main lammps 0~20181211.gitad1b1897d+dfsg1-2 (dsc) [2494 B]
Get:2 http://172.17.0.1/private bullseye-staging/main lammps 0~20181211.gitad1b1897d+dfsg1-2 (tar) [81.6 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main lammps 0~20181211.gitad1b1897d+dfsg1-2 (diff) [12.0 kB]
Fetched 81.6 MB in 30s (2694 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/lammps-J663QL/lammps-0~20181211.gitad1b1897d+dfsg1' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/lammps-J663QL' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install build-essential                                                      |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-SWWC1Y/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-SWWC1Y/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-SWWC1Y/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg:               imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg:              unchanged: 1
gpg:       secret keys read: 1
gpg:   secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-SWWC1Y/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-SWWC1Y/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-SWWC1Y/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-SWWC1Y/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-SWWC1Y/apt_archive ./ Packages [432 B]
Fetched 2108 B in 1s (2600 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install core build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
  netbase
Use 'apt autoremove' to remove it.
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 96 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-SWWC1Y/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12050 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any all)

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper (>= 11~), libeigen3-dev, cmake, gfortran | fortran-compiler, libfftw3-dev, libjpeg-dev, mpi-default-bin, mpi-default-dev, libpython-dev, libsymspg-dev, libavcodec-dev, libnetcdf-dev, libvtk6-dev, voro++-dev, ocl-icd-opencl-dev
Filtered Build-Depends: debhelper (>= 11~), libeigen3-dev, cmake, gfortran, libfftw3-dev, libjpeg-dev, mpi-default-bin, mpi-default-dev, libpython-dev, libsymspg-dev, libavcodec-dev, libnetcdf-dev, libvtk6-dev, voro++-dev, ocl-icd-opencl-dev
dpkg-deb: building package 'sbuild-build-depends-lammps-dummy' in '/<<BUILDDIR>>/resolver-SWWC1Y/apt_archive/sbuild-build-depends-lammps-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy sbuild-build-depends-lammps-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-SWWC1Y/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-SWWC1Y/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-SWWC1Y/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-SWWC1Y/apt_archive ./ Sources [599 B]
Get:5 copy:/<<BUILDDIR>>/resolver-SWWC1Y/apt_archive ./ Packages [671 B]
Fetched 2603 B in 1s (3515 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install lammps build dependencies (apt-based resolver)
------------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
  netbase
Use 'apt autoremove' to remove it.
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev binutils
  binutils-arm-linux-gnueabihf binutils-common bsdmainutils cmake cmake-data
  cpp cpp-9 cython debhelper default-libmysqlclient-dev dh-autoreconf
  dh-strip-nondeterminism dwz file fontconfig fontconfig-config
  fonts-dejavu-core g++ g++-9 gcc gcc-9 gcc-9-base gdal-data gettext
  gettext-base gfortran gfortran-9 groff-base hdf5-helpers ibverbs-providers
  icu-devtools intltool-debian iso-codes libaec-dev libaec0 libaom0
  libarchive-zip-perl libarchive13 libarmadillo-dev libarmadillo9 libarpack2
  libarpack2-dev libasan5 libatomic1 libavahi-client3 libavahi-common-data
  libavahi-common3 libavcodec-dev libavcodec58 libavformat-dev libavformat58
  libavutil-dev libavutil56 libbinutils libblas-dev libblas3 libbluray2
  libboost-dev libboost1.67-dev libbrotli1 libbsd0 libcairo2 libcap2
  libcap2-bin libcc1-0 libcharls-dev libcharls2 libchromaprint1
  libcodec2-0.8.1 libcroco3 libcups2 libcurl3-gnutls libcurl4
  libcurl4-gnutls-dev libdap-dev libdap25 libdapclient6v5 libdapserver7v5
  libdatrie1 libdbus-1-3 libdouble-conversion3 libdrm-amdgpu1 libdrm-common
  libdrm-dev libdrm-etnaviv1 libdrm-exynos1 libdrm-freedreno1 libdrm-nouveau2
  libdrm-omap1 libdrm-radeon1 libdrm-tegra0 libdrm2 libedit2 libegl-mesa0
  libegl1 libeigen3-dev libelf1 libepsilon-dev libepsilon1 libevdev2
  libevent-2.1-6 libevent-core-2.1-6 libevent-pthreads-2.1-6 libexpat1
  libexpat1-dev libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-single3
  libfile-stripnondeterminism-perl libfontconfig1 libfontconfig1-dev
  libfreetype6 libfreetype6-dev libfreexl-dev libfreexl1 libfribidi0
  libfyba-dev libfyba0 libgbm1 libgcc-9-dev libgcc1 libgdal-dev libgdal20
  libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgeos-3.7.2 libgeos-c1v5
  libgeos-dev libgeotiff-dev libgeotiff5 libgfortran-9-dev libgfortran5
  libgif-dev libgif7 libgl1 libgl1-mesa-dev libgl1-mesa-dri libgl2ps-dev
  libgl2ps1.4 libglapi-mesa libgles1 libgles2 libglib2.0-0 libglu1-mesa
  libglu1-mesa-dev libglvnd-core-dev libglvnd-dev libglvnd0 libglx-mesa0
  libglx0 libgme0 libgmp-dev libgmpxx4ldbl libgnutls-dane0 libgnutls-openssl27
  libgnutls28-dev libgnutls30 libgnutlsxx28 libgomp1 libgraphite2-3 libgsm1
  libgssapi-krb5-2 libgstreamer-plugins-base1.0-0 libgstreamer1.0-0
  libgudev-1.0-0 libharfbuzz0b libhdf4-0-alt libhdf4-alt-dev libhdf5-103
  libhdf5-cpp-103 libhdf5-dev libhdf5-mpi-dev libhdf5-openmpi-103
  libhdf5-openmpi-dev libhwloc-dev libhwloc-plugins libhwloc5 libhyphen0
  libibverbs-dev libibverbs1 libice-dev libice6 libicu-dev libicu63 libidn2-0
  libidn2-dev libinput-bin libinput10 libjbig-dev libjbig0 libjpeg-dev
  libjpeg62-turbo libjpeg62-turbo-dev libjs-jquery libjs-sphinxdoc
  libjs-underscore libjson-c-dev libjson-c4 libjsoncpp-dev libjsoncpp1
  libk5crypto3 libkeyutils1 libkml-dev libkmlbase1 libkmlconvenience1
  libkmldom1 libkmlengine1 libkmlregionator1 libkmlxsd1 libkrb5-3
  libkrb5support0 liblapack-dev liblapack3 liblcms2-2 libllvm8 libltdl-dev
  libltdl7 liblzma-dev libmagic-mgc libmagic1 libmariadb-dev
  libmariadb-dev-compat libmariadb3 libminizip-dev libminizip1 libmp3lame0
  libmpg123-0 libmtdev1 libncurses6 libncursesw6 libnetcdf-c++4
  libnetcdf-cxx-legacy-dev libnetcdf-dev libnetcdf13 libnghttp2-14 libnl-3-200
  libnl-3-dev libnl-route-3-200 libnl-route-3-dev libnspr4 libnss3 libodbc1
  libogdi-dev libogdi4.1 libogg-dev libogg0 libopengl0 libopenjp2-7
  libopenjp2-7-dev libopenmpi-dev libopenmpi3 libopenmpt0 libopus0
  liborc-0.4-0 libp11-kit-dev libp11-kit0 libpango-1.0-0 libpangocairo-1.0-0
  libpangoft2-1.0-0 libpciaccess0 libpcre16-3 libpcre2-16-0 libpcre3-dev
  libpcre32-3 libpcrecpp0v5 libpipeline1 libpixman-1-0 libpmix2 libpng-dev
  libpng16-16 libpoppler-dev libpoppler-private-dev libpoppler82 libpopt0
  libpq-dev libpq5 libprocps7 libproj-dev libproj15 libpsl5
  libpthread-stubs0-dev libpython-dev libpython-stdlib libpython2-dev
  libpython2-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal
  libpython2.7-stdlib libqhull-dev libqhull-r7 libqhull7 libqt5core5a
  libqt5dbus5 libqt5gui5 libqt5network5 libqt5opengl5 libqt5positioning5
  libqt5printsupport5 libqt5qml5 libqt5quick5 libqt5sensors5 libqt5webchannel5
  libqt5webkit5 libqt5widgets5 libreadline8 librhash0 librsvg2-2 librtmp1
  libsensors-config libsensors5 libshine3 libsigsegv2 libsm-dev libsm6
  libsnappy1v5 libsodium23 libsoxr0 libspatialite-dev libspatialite7 libspeex1
  libsqlite3-0 libsqlite3-dev libssh-gcrypt-4 libssh2-1 libssl1.1
  libstdc++-9-dev libstdc++6 libsub-override-perl libsuperlu-dev libsuperlu5
  libswresample-dev libswresample3 libswscale-dev libswscale5 libsymspg-dev
  libsymspg1 libsz2 libtasn1-6 libtasn1-6-dev libthai-data libthai0
  libtheora-dev libtheora0 libtiff-dev libtiff5 libtiffxx5 libtinfo5 libtinfo6
  libtool libtwolame0 libubsan1 libuchardet0 libunbound8 liburiparser-dev
  liburiparser1 libuuid1 libuv1 libva-drm2 libva-x11-2 libva2 libvdpau1
  libvorbis0a libvorbisenc2 libvorbisfile3 libvoro++1 libvpx6 libvtk6-dev
  libvtk6.3 libvtk6.3-qt libwacom-common libwacom2 libwavpack1
  libwayland-client0 libwayland-server0 libwebp-dev libwebp6 libwebpdemux2
  libwebpmux3 libwoff1 libx11-6 libx11-data libx11-dev libx11-xcb-dev
  libx11-xcb1 libx264-155 libx265-176 libxau-dev libxau6 libxcb-dri2-0
  libxcb-dri2-0-dev libxcb-dri3-0 libxcb-dri3-dev libxcb-glx0 libxcb-glx0-dev
  libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present-dev
  libxcb-present0 libxcb-randr0 libxcb-randr0-dev libxcb-render-util0
  libxcb-render0 libxcb-render0-dev libxcb-shape0 libxcb-shape0-dev
  libxcb-shm0 libxcb-sync-dev libxcb-sync1 libxcb-util0 libxcb-xfixes0
  libxcb-xfixes0-dev libxcb-xinerama0 libxcb-xkb1 libxcb1 libxcb1-dev
  libxdamage-dev libxdamage1 libxdmcp-dev libxdmcp6 libxerces-c-dev
  libxerces-c3.2 libxext-dev libxext6 libxfixes-dev libxfixes3 libxft-dev
  libxft2 libxi6 libxkbcommon-x11-0 libxkbcommon0 libxml2 libxml2-dev
  libxrender-dev libxrender1 libxshmfence-dev libxshmfence1 libxslt1.1
  libxss-dev libxss1 libxt-dev libxt6 libxvidcore4 libxxf86vm-dev libxxf86vm1
  libzstd-dev libzstd1 libzvbi-common libzvbi0 m4 man-db mariadb-common
  mesa-common-dev mime-support mpi-default-bin mpi-default-dev
  multiarch-support mysql-common nettle-dev ocl-icd-libopencl1
  ocl-icd-opencl-dev odbcinst odbcinst1debian2 opencl-c-headers openmpi-bin
  openmpi-common openssh-client pkg-config po-debconf procps proj-data python
  python-asn1crypto python-attr python-autobahn python-automat python-cbor
  python-cffi-backend python-concurrent.futures python-configparser
  python-constantly python-cryptography python-enum34 python-future
  python-hyperlink python-incremental python-ipaddress python-lz4
  python-minimal python-mpi4py python-nacl python-openssl python-pkg-resources
  python-pyasn1 python-pyasn1-modules python-pyqrcode python-service-identity
  python-six python-snappy python-trie python-trollius python-twisted
  python-twisted-bin python-twisted-core python-txaio python-u-msgpack
  python-ubjson python-vtk6 python-wsaccel python-zope.interface python2
  python2-minimal python2.7 python2.7-minimal sensible-utils shared-mime-info
  ucf unixodbc-dev uuid-dev voro++-dev x11-common x11proto-core-dev
  x11proto-damage-dev x11proto-dev x11proto-fixes-dev x11proto-scrnsaver-dev
  x11proto-xext-dev x11proto-xf86vidmode-dev xkb-data xorg-sgml-doctools
  xtrans-dev zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc binutils-doc wamerican
  | wordlist whois vacation cmake-doc ninja-build cpp-doc gcc-9-locales
  cython-doc dh-make gcc-9-doc libstdc++6-9-dbg gcc-multilib manpages-dev flex
  bison gdb gcc-doc libgcc1-dbg libgomp1-dbg libitm1-dbg libatomic1-dbg
  libasan5-dbg liblsan0-dbg libtsan0-dbg libubsan1-dbg libquadmath0-dbg
  gettext-doc libasprintf-dev libgettextpo-dev gfortran-doc gfortran-9-doc
  libgfortran5-dbg libcoarrays-dev groff isoquery lrzip libitpp-dev
  liblapack-doc libbluray-bdj libboost-doc libboost1.67-doc
  libboost-atomic1.67-dev libboost-chrono1.67-dev libboost-container1.67-dev
  libboost-context1.67-dev libboost-coroutine1.67-dev
  libboost-date-time1.67-dev libboost-exception1.67-dev libboost-fiber1.67-dev
  libboost-filesystem1.67-dev libboost-graph1.67-dev
  libboost-graph-parallel1.67-dev libboost-iostreams1.67-dev
  libboost-locale1.67-dev libboost-log1.67-dev libboost-math1.67-dev
  libboost-mpi1.67-dev libboost-mpi-python1.67-dev libboost-numpy1.67-dev
  libboost-program-options1.67-dev libboost-python1.67-dev
  libboost-random1.67-dev libboost-regex1.67-dev
  libboost-serialization1.67-dev libboost-signals1.67-dev
  libboost-stacktrace1.67-dev libboost-system1.67-dev libboost-test1.67-dev
  libboost-thread1.67-dev libboost-timer1.67-dev libboost-type-erasure1.67-dev
  libboost-wave1.67-dev libboost1.67-tools-dev libmpfrc++-dev libntl-dev
  cups-common libcurl4-doc libidn11-dev libkrb5-dev libldap2-dev librtmp-dev
  libssh2-1-dev libeigen3-doc libfftw3-doc freetype2-doc libgdal-doc
  libgeotiff-epsg geotiff-bin gdal-bin gmp-doc libgmp10-doc libmpfr-dev
  dns-root-data gnutls-bin gnutls-doc krb5-doc krb5-user libvisual-0.4-plugins
  gstreamer1.0-tools libhdf4-doc hdf4-tools libhdf5-doc
  libhwloc-contrib-plugins libice-doc icu-doc liblcms2-utils libtool-doc
  liblzma-doc netcdf-bin netcdf-doc libmyodbc odbc-postgresql tdsodbc
  unixodbc-bin ogdi-bin openmpi-doc opus-tools pciutils postgresql-doc-11
  proj-bin qt5-image-formats-plugins qtwayland5 qt5-qmltooling-plugins
  librsvg2-bin lm-sensors libsm-doc speex sqlite3-doc libstdc++-9-doc
  libsuperlu-doc gcj-jdk libx11-doc libxcb-doc libxerces-c-doc libxext-doc
  libxt-doc m4-doc apparmor less www-browser opencl-icd keychain libpam-ssh
  monkeysphere ssh-askpass libmail-box-perl python-doc python-tk
  python-attr-doc python-cryptography-doc python-cryptography-vectors
  python-enum34-doc python-future-doc python-numpy python-nacl-doc
  python-openssl-doc python-openssl-dbg python-setuptools python-trie-doc
  python-twisted-bin-dbg python-gtk2 python-glade2 python-pampy python-qt3
  python-serial python-wxgtk3.0 python-txaio-doc mayavi2 python2-doc
  python2.7-doc binfmt-support
Recommended packages:
  python-dev curl | wget | lynx libaacs0 libpam-cap ca-certificates dbus
  libarchive-cpio-perl proj-bin libgdk-pixbuf2.0-bin libglib2.0-data
  xdg-user-dirs gstreamer1.0-plugins-base javascript-common krb5-locales
  libgpm2 libcoarrays-openmpi-dev libpng-tools poppler-data publicsuffix
  qttranslations5-l10n libqt5svg5 qt5-gtk-platformtheme geoclue-2.0
  librsvg2-common libtasn1-doc uuid-runtime va-driver-all | va-driver
  vdpau-driver-all | vdpau-driver libwacom-bin xauth libmail-sendmail-perl
  psmisc python-click python-png python-idna
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data
  cpp-9 cython debhelper default-libmysqlclient-dev dh-autoreconf
  dh-strip-nondeterminism dwz file fontconfig fontconfig-config
  fonts-dejavu-core g++-9 gcc-9 gcc-9-base gdal-data gettext gettext-base
  gfortran gfortran-9 groff-base hdf5-helpers ibverbs-providers icu-devtools
  intltool-debian iso-codes libaec-dev libaec0 libaom0 libarchive-zip-perl
  libarchive13 libarmadillo-dev libarmadillo9 libarpack2 libarpack2-dev
  libavahi-client3 libavahi-common-data libavahi-common3 libavcodec-dev
  libavcodec58 libavformat-dev libavformat58 libavutil-dev libavutil56
  libblas-dev libblas3 libbluray2 libboost-dev libboost1.67-dev libbrotli1
  libbsd0 libcairo2 libcap2 libcap2-bin libcharls-dev libcharls2
  libchromaprint1 libcodec2-0.8.1 libcroco3 libcups2 libcurl3-gnutls libcurl4
  libcurl4-gnutls-dev libdap-dev libdap25 libdapclient6v5 libdapserver7v5
  libdatrie1 libdbus-1-3 libdouble-conversion3 libdrm-amdgpu1 libdrm-common
  libdrm-dev libdrm-etnaviv1 libdrm-exynos1 libdrm-freedreno1 libdrm-nouveau2
  libdrm-omap1 libdrm-radeon1 libdrm-tegra0 libdrm2 libedit2 libegl-mesa0
  libegl1 libeigen3-dev libelf1 libepsilon-dev libepsilon1 libevdev2
  libevent-2.1-6 libevent-core-2.1-6 libevent-pthreads-2.1-6 libexpat1
  libexpat1-dev libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-single3
  libfile-stripnondeterminism-perl libfontconfig1 libfontconfig1-dev
  libfreetype6 libfreetype6-dev libfreexl-dev libfreexl1 libfribidi0
  libfyba-dev libfyba0 libgbm1 libgcc-9-dev libgdal-dev libgdal20
  libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgeos-3.7.2 libgeos-c1v5
  libgeos-dev libgeotiff-dev libgeotiff5 libgfortran-9-dev libgfortran5
  libgif-dev libgif7 libgl1 libgl1-mesa-dev libgl1-mesa-dri libgl2ps-dev
  libgl2ps1.4 libglapi-mesa libgles1 libgles2 libglib2.0-0 libglu1-mesa
  libglu1-mesa-dev libglvnd-core-dev libglvnd-dev libglvnd0 libglx-mesa0
  libglx0 libgme0 libgmp-dev libgmpxx4ldbl libgnutls-dane0 libgnutls-openssl27
  libgnutls28-dev libgnutlsxx28 libgraphite2-3 libgsm1 libgssapi-krb5-2
  libgstreamer-plugins-base1.0-0 libgstreamer1.0-0 libgudev-1.0-0
  libharfbuzz0b libhdf4-0-alt libhdf4-alt-dev libhdf5-103 libhdf5-cpp-103
  libhdf5-dev libhdf5-mpi-dev libhdf5-openmpi-103 libhdf5-openmpi-dev
  libhwloc-dev libhwloc-plugins libhwloc5 libhyphen0 libibverbs-dev
  libibverbs1 libice-dev libice6 libicu-dev libicu63 libidn2-dev libinput-bin
  libinput10 libjbig-dev libjbig0 libjpeg-dev libjpeg62-turbo
  libjpeg62-turbo-dev libjs-jquery libjs-sphinxdoc libjs-underscore
  libjson-c-dev libjson-c4 libjsoncpp-dev libjsoncpp1 libk5crypto3
  libkeyutils1 libkml-dev libkmlbase1 libkmlconvenience1 libkmldom1
  libkmlengine1 libkmlregionator1 libkmlxsd1 libkrb5-3 libkrb5support0
  liblapack-dev liblapack3 liblcms2-2 libllvm8 libltdl-dev libltdl7
  liblzma-dev libmagic-mgc libmagic1 libmariadb-dev libmariadb-dev-compat
  libmariadb3 libminizip-dev libminizip1 libmp3lame0 libmpg123-0 libmtdev1
  libncurses6 libnetcdf-c++4 libnetcdf-cxx-legacy-dev libnetcdf-dev
  libnetcdf13 libnghttp2-14 libnl-3-200 libnl-3-dev libnl-route-3-200
  libnl-route-3-dev libnspr4 libnss3 libodbc1 libogdi-dev libogdi4.1
  libogg-dev libogg0 libopengl0 libopenjp2-7 libopenjp2-7-dev libopenmpi-dev
  libopenmpi3 libopenmpt0 libopus0 liborc-0.4-0 libp11-kit-dev libpango-1.0-0
  libpangocairo-1.0-0 libpangoft2-1.0-0 libpciaccess0 libpcre16-3
  libpcre2-16-0 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1
  libpixman-1-0 libpmix2 libpng-dev libpng16-16 libpoppler-dev
  libpoppler-private-dev libpoppler82 libpopt0 libpq-dev libpq5 libprocps7
  libproj-dev libproj15 libpsl5 libpthread-stubs0-dev libpython-dev
  libpython-stdlib libpython2-dev libpython2-stdlib libpython2.7
  libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libqhull-dev
  libqhull-r7 libqhull7 libqt5core5a libqt5dbus5 libqt5gui5 libqt5network5
  libqt5opengl5 libqt5positioning5 libqt5printsupport5 libqt5qml5 libqt5quick5
  libqt5sensors5 libqt5webchannel5 libqt5webkit5 libqt5widgets5 libreadline8
  librhash0 librsvg2-2 librtmp1 libsensors-config libsensors5 libshine3
  libsigsegv2 libsm-dev libsm6 libsnappy1v5 libsodium23 libsoxr0
  libspatialite-dev libspatialite7 libspeex1 libsqlite3-dev libssh-gcrypt-4
  libssh2-1 libssl1.1 libstdc++-9-dev libsub-override-perl libsuperlu-dev
  libsuperlu5 libswresample-dev libswresample3 libswscale-dev libswscale5
  libsymspg-dev libsymspg1 libsz2 libtasn1-6-dev libthai-data libthai0
  libtheora-dev libtheora0 libtiff-dev libtiff5 libtiffxx5 libtinfo5 libtool
  libtwolame0 libuchardet0 libunbound8 liburiparser-dev liburiparser1 libuv1
  libva-drm2 libva-x11-2 libva2 libvdpau1 libvorbis0a libvorbisenc2
  libvorbisfile3 libvoro++1 libvpx6 libvtk6-dev libvtk6.3 libvtk6.3-qt
  libwacom-common libwacom2 libwavpack1 libwayland-client0 libwayland-server0
  libwebp-dev libwebp6 libwebpdemux2 libwebpmux3 libwoff1 libx11-6 libx11-data
  libx11-dev libx11-xcb-dev libx11-xcb1 libx264-155 libx265-176 libxau-dev
  libxau6 libxcb-dri2-0 libxcb-dri2-0-dev libxcb-dri3-0 libxcb-dri3-dev
  libxcb-glx0 libxcb-glx0-dev libxcb-icccm4 libxcb-image0 libxcb-keysyms1
  libxcb-present-dev libxcb-present0 libxcb-randr0 libxcb-randr0-dev
  libxcb-render-util0 libxcb-render0 libxcb-render0-dev libxcb-shape0
  libxcb-shape0-dev libxcb-shm0 libxcb-sync-dev libxcb-sync1 libxcb-util0
  libxcb-xfixes0 libxcb-xfixes0-dev libxcb-xinerama0 libxcb-xkb1 libxcb1
  libxcb1-dev libxdamage-dev libxdamage1 libxdmcp-dev libxdmcp6
  libxerces-c-dev libxerces-c3.2 libxext-dev libxext6 libxfixes-dev libxfixes3
  libxft-dev libxft2 libxi6 libxkbcommon-x11-0 libxkbcommon0 libxml2
  libxml2-dev libxrender-dev libxrender1 libxshmfence-dev libxshmfence1
  libxslt1.1 libxss-dev libxss1 libxt-dev libxt6 libxvidcore4 libxxf86vm-dev
  libxxf86vm1 libzstd-dev libzvbi-common libzvbi0 m4 man-db mariadb-common
  mesa-common-dev mime-support mpi-default-bin mpi-default-dev
  multiarch-support mysql-common nettle-dev ocl-icd-libopencl1
  ocl-icd-opencl-dev odbcinst odbcinst1debian2 opencl-c-headers openmpi-bin
  openmpi-common openssh-client pkg-config po-debconf procps proj-data python
  python-asn1crypto python-attr python-autobahn python-automat python-cbor
  python-cffi-backend python-concurrent.futures python-configparser
  python-constantly python-cryptography python-enum34 python-future
  python-hyperlink python-incremental python-ipaddress python-lz4
  python-minimal python-mpi4py python-nacl python-openssl python-pkg-resources
  python-pyasn1 python-pyasn1-modules python-pyqrcode python-service-identity
  python-six python-snappy python-trie python-trollius python-twisted
  python-twisted-bin python-twisted-core python-txaio python-u-msgpack
  python-ubjson python-vtk6 python-wsaccel python-zope.interface python2
  python2-minimal python2.7 python2.7-minimal
  sbuild-build-depends-lammps-dummy sensible-utils shared-mime-info ucf
  unixodbc-dev uuid-dev voro++-dev x11-common x11proto-core-dev
  x11proto-damage-dev x11proto-dev x11proto-fixes-dev x11proto-scrnsaver-dev
  x11proto-xext-dev x11proto-xf86vidmode-dev xkb-data xorg-sgml-doctools
  xtrans-dev zlib1g-dev
The following packages will be upgraded:
  binutils binutils-arm-linux-gnueabihf binutils-common cpp g++ gcc libasan5
  libatomic1 libbinutils libcc1-0 libgcc1 libgnutls30 libgomp1 libidn2-0
  libncursesw6 libp11-kit0 libsqlite3-0 libstdc++6 libtasn1-6 libtinfo6
  libubsan1 libuuid1 libzstd1
23 upgraded, 517 newly installed, 0 to remove and 73 not upgraded.
Need to get 301 MB of archives.
After this operation, 1541 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-SWWC1Y/apt_archive ./ sbuild-build-depends-lammps-dummy 0.invalid.0 [956 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libbsd0 armhf 0.10.0-1 [112 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf libtinfo5 armhf 6.1+20190803-1 [314 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf gcc-9-base armhf 9.2.1-4+rpi1 [192 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf libgcc1 armhf 1:9.2.1-4+rpi1 [36.9 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libstdc++6 armhf 9.2.1-4+rpi1 [413 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-3 [782 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.1-2 [26.6 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.8.7-3 [1254 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf multiarch-support armhf 2.28-10+rpi1 [215 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf libmtdev1 armhf 1.1.5-1 [20.9 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf libogg0 armhf 1.3.2-1 [17.2 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf libatomic1 armhf 9.2.1-4+rpi1 [8148 B]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf libglvnd0 armhf 1.1.0-1 [54.5 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf libdrm-common all 2.4.99-1+rpi1 [14.1 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf libdrm2 armhf 2.4.99-1+rpi1 [36.3 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf libexpat1 armhf 2.2.7-1 [77.2 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf libwayland-server0 armhf 1.17.0-1 [26.2 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf libgbm1 armhf 19.1.4-1 [65.2 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf libglapi-mesa armhf 19.1.4-1 [74.7 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf libwayland-client0 armhf 1.17.0-1 [21.3 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf libx11-xcb1 armhf 2:1.6.7-1 [190 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf libxcb1 armhf 1.13.1-2 [132 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf libxcb-dri2-0 armhf 1.13.1-2 [100 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf libxcb-dri3-0 armhf 1.13.1-2 [100 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf libxcb-present0 armhf 1.13.1-2 [99.1 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf libxcb-sync1 armhf 1.13.1-2 [102 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf libxcb-xfixes0 armhf 1.13.1-2 [103 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf libxshmfence1 armhf 1.3-1 [8636 B]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf libegl-mesa0 armhf 19.1.4-1 [118 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf libegl1 armhf 1.1.0-1 [27.6 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf libgles2 armhf 1.1.0-1 [20.6 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.60.6-2 [1109 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf libcap2 armhf 1:2.25-2 [16.5 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf libcap2-bin armhf 1:2.25-2 [28.4 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf libgstreamer1.0-0 armhf 1.16.0-2.1 [2052 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf liborc-0.4-0 armhf 1:0.4.28-3.1 [116 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf iso-codes all 4.3-1 [2742 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf libgstreamer-plugins-base1.0-0 armhf 1.14.4-2 [1853 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf libhyphen0 armhf 2.8.8-7 [30.0 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf libicu63 armhf 63.2-2 [7974 kB]
Get:46 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo armhf 1:1.5.2-2+b1 [110 kB]
Get:47 http://172.17.0.1/private bullseye-staging/main armhf libpng16-16 armhf 1.6.37-1 [274 kB]
Get:48 http://172.17.0.1/private bullseye-staging/main armhf libdouble-conversion3 armhf 3.1.5-2 [39.1 kB]
Get:49 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-16-0 armhf 10.32-5 [175 kB]
Get:50 http://172.17.0.1/private bullseye-staging/main armhf libqt5core5a armhf 5.11.3+dfsg1-4+rpi1 [1646 kB]
Get:51 http://172.17.0.1/private bullseye-staging/main armhf libfreetype6 armhf 2.9.1-4 [317 kB]
Get:52 http://172.17.0.1/private bullseye-staging/main armhf libuuid1 armhf 2.34-0.1 [77.4 kB]
Get:53 http://172.17.0.1/private bullseye-staging/main armhf sensible-utils all 0.0.12 [15.8 kB]
Get:54 http://172.17.0.1/private bullseye-staging/main armhf ucf all 3.0038+nmu1 [69.0 kB]
Get:55 http://172.17.0.1/private bullseye-staging/main armhf fonts-dejavu-core all 2.37-1 [1068 kB]
Get:56 http://172.17.0.1/private bullseye-staging/main armhf fontconfig-config all 2.13.1-2 [280 kB]
Get:57 http://172.17.0.1/private bullseye-staging/main armhf libfontconfig1 armhf 2.13.1-2 [327 kB]
Get:58 http://172.17.0.1/private bullseye-staging/main armhf fontconfig armhf 2.13.1-2 [404 kB]
Get:59 http://172.17.0.1/private bullseye-staging/main armhf libgraphite2-3 armhf 1.3.13-8 [70.5 kB]
Get:60 http://172.17.0.1/private bullseye-staging/main armhf libharfbuzz0b armhf 2.6.1-2 [1271 kB]
Get:61 http://172.17.0.1/private bullseye-staging/main armhf x11-common all 1:7.7+19 [251 kB]
Get:62 http://172.17.0.1/private bullseye-staging/main armhf libice6 armhf 2:1.0.9-2 [51.6 kB]
Get:63 http://172.17.0.1/private bullseye-staging/main armhf libevdev2 armhf 1.8.0+dfsg-1 [26.7 kB]
Get:64 http://172.17.0.1/private bullseye-staging/main armhf libgudev-1.0-0 armhf 232-2+rpi1 [11.8 kB]
Get:65 http://172.17.0.1/private bullseye-staging/main armhf libwacom-common all 0.32-1 [39.1 kB]
Get:66 http://172.17.0.1/private bullseye-staging/main armhf libwacom2 armhf 0.32-1 [16.1 kB]
Get:67 http://172.17.0.1/private bullseye-staging/main armhf libinput-bin armhf 1.14.0-1 [16.9 kB]
Get:68 http://172.17.0.1/private bullseye-staging/main armhf libinput10 armhf 1.14.0-1 [96.2 kB]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf libdbus-1-3 armhf 1.12.16-1+b1 [189 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf libqt5dbus5 armhf 5.11.3+dfsg1-4+rpi1 [197 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf libssl1.1 armhf 1.1.1c-1 [1259 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf libqt5network5 armhf 5.11.3+dfsg1-4+rpi1 [558 kB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf libsm6 armhf 2:1.2.3-1 [32.9 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf libx11-data all 2:1.6.7-1 [298 kB]
Get:75 http://172.17.0.1/private bullseye-staging/main armhf libx11-6 armhf 2:1.6.7-1 [689 kB]
Get:76 http://172.17.0.1/private bullseye-staging/main armhf libxcb-icccm4 armhf 0.4.1-1.1 [26.3 kB]
Get:77 http://172.17.0.1/private bullseye-staging/main armhf libxcb-shm0 armhf 1.13.1-2 [99.3 kB]
Get:78 http://172.17.0.1/private bullseye-staging/main armhf libxcb-util0 armhf 0.3.8-3 [21.5 kB]
Get:79 http://172.17.0.1/private bullseye-staging/main armhf libxcb-image0 armhf 0.4.0-1+b2 [23.3 kB]
Get:80 http://172.17.0.1/private bullseye-staging/main armhf libxcb-keysyms1 armhf 0.4.0-1+b2 [15.9 kB]
Get:81 http://172.17.0.1/private bullseye-staging/main armhf libxcb-randr0 armhf 1.13.1-2 [109 kB]
Get:82 http://172.17.0.1/private bullseye-staging/main armhf libxcb-render0 armhf 1.13.1-2 [108 kB]
Get:83 http://172.17.0.1/private bullseye-staging/main armhf libxcb-render-util0 armhf 0.3.9-1+b1 [17.3 kB]
Get:84 http://172.17.0.1/private bullseye-staging/main armhf libxcb-shape0 armhf 1.13.1-2 [99.5 kB]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf libxcb-xinerama0 armhf 1.13.1-2 [98.8 kB]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf libxcb-xkb1 armhf 1.13.1-2 [120 kB]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf libxext6 armhf 2:1.3.3-1+b2 [47.8 kB]
Get:88 http://172.17.0.1/private bullseye-staging/main armhf libxi6 armhf 2:1.7.9-1 [77.8 kB]
Get:89 http://172.17.0.1/private bullseye-staging/main armhf xkb-data all 2.26-2 [681 kB]
Get:90 http://172.17.0.1/private bullseye-staging/main armhf libxkbcommon0 armhf 0.8.2-1 [110 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf libxkbcommon-x11-0 armhf 0.8.2-1 [38.1 kB]
Get:92 http://172.17.0.1/private bullseye-staging/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get:93 http://172.17.0.1/private bullseye-staging/main armhf libqt5gui5 armhf 5.11.3+dfsg1-4+rpi1 [2187 kB]
Get:94 http://172.17.0.1/private bullseye-staging/main armhf libqt5positioning5 armhf 5.11.3+dfsg-2 [159 kB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf libavahi-common-data armhf 0.7-4+b2 [122 kB]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf libavahi-common3 armhf 0.7-4+b2 [51.0 kB]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf libavahi-client3 armhf 0.7-4+b2 [54.1 kB]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf libtasn1-6 armhf 4.14-2 [48.2 kB]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf libidn2-0 armhf 2.2.0-1 [80.0 kB]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf libp11-kit0 armhf 0.23.16.1-2 [297 kB]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf libgnutls30 armhf 3.6.9-4 [1081 kB]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf libkeyutils1 armhf 1.6-6 [14.0 kB]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf libkrb5support0 armhf 1.17-6+b1 [61.5 kB]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf libk5crypto3 armhf 1.17-6+b1 [112 kB]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf libkrb5-3 armhf 1.17-6+b1 [316 kB]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf libgssapi-krb5-2 armhf 1.17-6+b1 [134 kB]
Get:107 http://172.17.0.1/private bullseye-staging/main armhf libcups2 armhf 2.2.12-2+rpi1 [292 kB]
Get:108 http://172.17.0.1/private bullseye-staging/main armhf libqt5widgets5 armhf 5.11.3+dfsg1-4+rpi1 [1935 kB]
Get:109 http://172.17.0.1/private bullseye-staging/main armhf libqt5printsupport5 armhf 5.11.3+dfsg1-4+rpi1 [196 kB]
Get:110 http://172.17.0.1/private bullseye-staging/main armhf libqt5qml5 armhf 5.11.3-4 [1001 kB]
Get:111 http://172.17.0.1/private bullseye-staging/main armhf libqt5quick5 armhf 5.11.3-4 [1049 kB]
Get:112 http://172.17.0.1/private bullseye-staging/main armhf libqt5sensors5 armhf 5.11.3-2 [94.6 kB]
Get:113 http://172.17.0.1/private bullseye-staging/main armhf libqt5webchannel5 armhf 5.11.3-2 [41.5 kB]
Get:114 http://172.17.0.1/private bullseye-staging/main armhf libsqlite3-0 armhf 3.29.0-2 [556 kB]
Get:115 http://172.17.0.1/private bullseye-staging/main armhf libwebp6 armhf 0.6.1-2 [228 kB]
Get:116 http://172.17.0.1/private bullseye-staging/main armhf libbrotli1 armhf 1.0.7-2 [269 kB]
Get:117 http://172.17.0.1/private bullseye-staging/main armhf libwoff1 armhf 1.0.2-1 [36.1 kB]
Get:118 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.4+dfsg1-7+b2 [571 kB]
Get:119 http://172.17.0.1/private bullseye-staging/main armhf libxslt1.1 armhf 1.1.32-2.1 [215 kB]
Get:120 http://172.17.0.1/private bullseye-staging/main armhf libqt5webkit5 armhf 5.212.0~alpha2-21+rpi1 [8306 kB]
Get:121 http://172.17.0.1/private bullseye-staging/main armhf libspeex1 armhf 1.2~rc1.2-1 [51.2 kB]
Get:122 http://172.17.0.1/private bullseye-staging/main armhf libpython2.7-minimal armhf 2.7.16-3 [395 kB]
Get:123 http://172.17.0.1/private bullseye-staging/main armhf python2.7-minimal armhf 2.7.16-3 [1090 kB]
Get:124 http://172.17.0.1/private bullseye-staging/main armhf python2-minimal armhf 2.7.16-1 [41.4 kB]
Get:125 http://172.17.0.1/private bullseye-staging/main armhf python-minimal armhf 2.7.16-1 [21.0 kB]
Get:126 http://172.17.0.1/private bullseye-staging/main armhf mime-support all 3.63 [37.7 kB]
Get:127 http://172.17.0.1/private bullseye-staging/main armhf libtinfo6 armhf 6.1+20190803-1 [318 kB]
Get:128 http://172.17.0.1/private bullseye-staging/main armhf libncursesw6 armhf 6.1+20190803-1 [104 kB]
Get:129 http://172.17.0.1/private bullseye-staging/main armhf libreadline8 armhf 8.0-3 [138 kB]
Get:130 http://172.17.0.1/private bullseye-staging/main armhf libpython2.7-stdlib armhf 2.7.16-3 [1845 kB]
Get:131 http://172.17.0.1/private bullseye-staging/main armhf python2.7 armhf 2.7.16-3 [305 kB]
Get:132 http://172.17.0.1/private bullseye-staging/main armhf libpython2-stdlib armhf 2.7.16-1 [20.8 kB]
Get:133 http://172.17.0.1/private bullseye-staging/main armhf libpython-stdlib armhf 2.7.16-1 [20.8 kB]
Get:134 http://172.17.0.1/private bullseye-staging/main armhf python2 armhf 2.7.16-1 [41.6 kB]
Get:135 http://172.17.0.1/private bullseye-staging/main armhf python armhf 2.7.16-1 [22.8 kB]
Get:136 http://172.17.0.1/private bullseye-staging/main armhf libzstd1 armhf 1.4.3+dfsg-1+rpi1 [205 kB]
Get:137 http://172.17.0.1/private bullseye-staging/main armhf libncurses6 armhf 6.1+20190803-1 [79.3 kB]
Get:138 http://172.17.0.1/private bullseye-staging/main armhf libprocps7 armhf 2:3.3.15-2 [58.9 kB]
Get:139 http://172.17.0.1/private bullseye-staging/main armhf procps armhf 2:3.3.15-2 [235 kB]
Get:140 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.37-5 [253 kB]
Get:141 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.37-5 [111 kB]
Get:142 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.37-5 [66.2 kB]
Get:143 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-9 [117 kB]
Get:144 http://172.17.0.1/private bullseye-staging/main armhf libevent-2.1-6 armhf 2.1.8-stable-4 [156 kB]
Get:145 http://172.17.0.1/private bullseye-staging/main armhf libedit2 armhf 3.1-20190324-1 [78.9 kB]
Get:146 http://172.17.0.1/private bullseye-staging/main armhf openssh-client armhf 1:8.0p1-6 [692 kB]
Get:147 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:148 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-2 [185 kB]
Get:149 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:150 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:151 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.1-4 [771 kB]
Get:152 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-9 [434 kB]
Get:153 http://172.17.0.1/private bullseye-staging/main armhf binutils-arm-linux-gnueabihf armhf 2.32.51.20190821-2+rpi1 [1672 kB]
Get:154 http://172.17.0.1/private bullseye-staging/main armhf libbinutils armhf 2.32.51.20190821-2+rpi1 [308 kB]
Get:155 http://172.17.0.1/private bullseye-staging/main armhf binutils armhf 2.32.51.20190821-2+rpi1 [57.5 kB]
Get:156 http://172.17.0.1/private bullseye-staging/main armhf binutils-common armhf 2.32.51.20190821-2+rpi1 [2082 kB]
Get:157 http://172.17.0.1/private bullseye-staging/main armhf cmake-data all 3.13.4-1 [1476 kB]
Get:158 http://172.17.0.1/private bullseye-staging/main armhf libarchive13 armhf 3.3.3-4 [270 kB]
Get:159 http://172.17.0.1/private bullseye-staging/main armhf libnghttp2-14 armhf 1.39.2-1 [71.3 kB]
Get:160 http://172.17.0.1/private bullseye-staging/main armhf libpsl5 armhf 0.20.2-2 [52.6 kB]
Get:161 http://172.17.0.1/private bullseye-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2 [54.0 kB]
Get:162 http://172.17.0.1/private bullseye-staging/main armhf libssh2-1 armhf 1.8.0-2.1 [126 kB]
Get:163 http://172.17.0.1/private bullseye-staging/main armhf libcurl4 armhf 7.65.3-1 [300 kB]
Get:164 http://172.17.0.1/private bullseye-staging/main armhf libjsoncpp1 armhf 1.7.4-3 [66.2 kB]
Get:165 http://172.17.0.1/private bullseye-staging/main armhf librhash0 armhf 1.3.8-1 [132 kB]
Get:166 http://172.17.0.1/private bullseye-staging/main armhf libuv1 armhf 1.30.1-1 [102 kB]
Get:167 http://172.17.0.1/private bullseye-staging/main armhf cmake armhf 3.13.4-1 [2559 kB]
Get:168 http://172.17.0.1/private bullseye-staging/main armhf cpp-9 armhf 9.2.1-4+rpi1 [6942 kB]
Get:169 http://172.17.0.1/private bullseye-staging/main armhf libcc1-0 armhf 9.2.1-4+rpi1 [38.1 kB]
Get:170 http://172.17.0.1/private bullseye-staging/main armhf libgomp1 armhf 9.2.1-4+rpi1 [73.8 kB]
Get:171 http://172.17.0.1/private bullseye-staging/main armhf libasan5 armhf 9.2.1-4+rpi1 [347 kB]
Get:172 http://172.17.0.1/private bullseye-staging/main armhf libubsan1 armhf 9.2.1-4+rpi1 [112 kB]
Get:173 http://172.17.0.1/private bullseye-staging/main armhf libgcc-9-dev armhf 9.2.1-4+rpi1 [640 kB]
Get:174 http://172.17.0.1/private bullseye-staging/main armhf gcc-9 armhf 9.2.1-4+rpi1 [7302 kB]
Get:175 http://172.17.0.1/private bullseye-staging/main armhf g++ armhf 4:9.2.1-3+rpi1 [1636 B]
Get:176 http://172.17.0.1/private bullseye-staging/main armhf gcc armhf 4:9.2.1-3+rpi1 [5208 B]
Get:177 http://172.17.0.1/private bullseye-staging/main armhf libstdc++-9-dev armhf 9.2.1-4+rpi1 [1705 kB]
Get:178 http://172.17.0.1/private bullseye-staging/main armhf g++-9 armhf 9.2.1-4+rpi1 [7654 kB]
Get:179 http://172.17.0.1/private bullseye-staging/main armhf cpp armhf 4:9.2.1-3+rpi1 [19.7 kB]
Get:180 http://172.17.0.1/private bullseye-staging/main armhf cython armhf 0.29.2-2 [1277 kB]
Get:181 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-9 [547 kB]
Get:182 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:183 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.64-1 [96.8 kB]
Get:184 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:185 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.5.0-1 [22.8 kB]
Get:186 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.5.0-1 [14.1 kB]
Get:187 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.176-1.1 [158 kB]
Get:188 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-1 [69.7 kB]
Get:189 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:190 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-9 [1219 kB]
Get:191 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:192 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:193 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 12.5.4 [1035 kB]
Get:194 http://172.17.0.1/private bullseye-staging/main armhf mysql-common all 5.8+1.0.5 [7324 B]
Get:195 http://172.17.0.1/private bullseye-staging/main armhf mariadb-common all 1:10.3.17-1 [31.6 kB]
Get:196 http://172.17.0.1/private bullseye-staging/main armhf libmariadb3 armhf 1:10.3.17-1 [157 kB]
Get:197 http://172.17.0.1/private bullseye-staging/main armhf libunbound8 armhf 1.9.3-1 [411 kB]
Get:198 http://172.17.0.1/private bullseye-staging/main armhf libgnutls-dane0 armhf 3.6.9-4 [329 kB]
Get:199 http://172.17.0.1/private bullseye-staging/main armhf libgnutls-openssl27 armhf 3.6.9-4 [329 kB]
Get:200 http://172.17.0.1/private bullseye-staging/main armhf libgnutlsxx28 armhf 3.6.9-4 [11.8 kB]
Get:201 http://172.17.0.1/private bullseye-staging/main armhf libidn2-dev armhf 2.2.0-1 [81.3 kB]
Get:202 http://172.17.0.1/private bullseye-staging/main armhf libp11-kit-dev armhf 0.23.16.1-2 [196 kB]
Get:203 http://172.17.0.1/private bullseye-staging/main armhf libtasn1-6-dev armhf 4.14-2 [99.2 kB]
Get:204 http://172.17.0.1/private bullseye-staging/main armhf libgmpxx4ldbl armhf 2:6.1.2+dfsg-4 [21.8 kB]
Get:205 http://172.17.0.1/private bullseye-staging/main armhf libgmp-dev armhf 2:6.1.2+dfsg-4 [570 kB]
Get:206 http://172.17.0.1/private bullseye-staging/main armhf nettle-dev armhf 3.4.1-1 [1079 kB]
Get:207 http://172.17.0.1/private bullseye-staging/main armhf libgnutls28-dev armhf 3.6.9-4 [1024 kB]
Get:208 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-1 [206 kB]
Get:209 http://172.17.0.1/private bullseye-staging/main armhf libmariadb-dev armhf 1:10.3.17-1 [993 kB]
Get:210 http://172.17.0.1/private bullseye-staging/main armhf libmariadb-dev-compat armhf 1:10.3.17-1 [30.8 kB]
Get:211 http://172.17.0.1/private bullseye-staging/main armhf default-libmysqlclient-dev armhf 1.0.5 [3764 B]
Get:212 http://172.17.0.1/private bullseye-staging/main armhf gdal-data all 2.4.2+dfsg-1 [748 kB]
Get:213 http://172.17.0.1/private bullseye-staging/main armhf libgfortran5 armhf 9.2.1-4+rpi1 [231 kB]
Get:214 http://172.17.0.1/private bullseye-staging/main armhf libgfortran-9-dev armhf 9.2.1-4+rpi1 [279 kB]
Get:215 http://172.17.0.1/private bullseye-staging/main armhf gfortran-9 armhf 9.2.1-4+rpi1 [7477 kB]
Get:216 http://172.17.0.1/private bullseye-staging/main armhf gfortran armhf 4:9.2.1-3+rpi1 [1432 B]
Get:217 http://172.17.0.1/private bullseye-staging/main armhf hdf5-helpers armhf 1.10.4+repack-10 [35.2 kB]
Get:218 http://172.17.0.1/private bullseye-staging/main armhf libnl-3-200 armhf 3.4.0-1 [55.0 kB]
Get:219 http://172.17.0.1/private bullseye-staging/main armhf libnl-route-3-200 armhf 3.4.0-1 [132 kB]
Get:220 http://172.17.0.1/private bullseye-staging/main armhf libibverbs1 armhf 24.0-2 [44.1 kB]
Get:221 http://172.17.0.1/private bullseye-staging/main armhf ibverbs-providers armhf 24.0-2 [20.5 kB]
Get:222 http://172.17.0.1/private bullseye-staging/main armhf icu-devtools armhf 63.2-2 [163 kB]
Get:223 http://172.17.0.1/private bullseye-staging/main armhf libaec0 armhf 1.0.4-1 [20.0 kB]
Get:224 http://172.17.0.1/private bullseye-staging/main armhf libsz2 armhf 1.0.4-1 [6664 B]
Get:225 http://172.17.0.1/private bullseye-staging/main armhf libaec-dev armhf 1.0.4-1 [17.8 kB]
Get:226 http://172.17.0.1/private bullseye-staging/main armhf libaom0 armhf 1.0.0.errata1-2 [796 kB]
Get:227 http://172.17.0.1/private bullseye-staging/main armhf libblas3 armhf 3.8.0-2 [103 kB]
Get:228 http://172.17.0.1/private bullseye-staging/main armhf liblapack3 armhf 3.8.0-2 [1493 kB]
Get:229 http://172.17.0.1/private bullseye-staging/main armhf libarpack2 armhf 3.7.0-2 [83.1 kB]
Get:230 http://172.17.0.1/private bullseye-staging/main armhf libsuperlu5 armhf 5.2.1+dfsg1-4 [126 kB]
Get:231 http://172.17.0.1/private bullseye-staging/main armhf libarmadillo9 armhf 1:9.600.5+dfsg-1 [91.3 kB]
Get:232 http://172.17.0.1/private bullseye-staging/main armhf libblas-dev armhf 3.8.0-2 [113 kB]
Get:233 http://172.17.0.1/private bullseye-staging/main armhf liblapack-dev armhf 3.8.0-2 [1551 kB]
Get:234 http://172.17.0.1/private bullseye-staging/main armhf libarpack2-dev armhf 3.7.0-2 [90.0 kB]
Get:235 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-103 armhf 1.10.4+repack-10 [1259 kB]
Get:236 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo-dev armhf 1:1.5.2-2+b1 [179 kB]
Get:237 http://172.17.0.1/private bullseye-staging/main armhf libjpeg-dev all 1:1.5.2-2 [57.5 kB]
Get:238 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-cpp-103 armhf 1.10.4+repack-10 [121 kB]
Get:239 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-dev armhf 1.10.4+repack-10 [2221 kB]
Get:240 http://172.17.0.1/private bullseye-staging/main armhf libsuperlu-dev armhf 5.2.1+dfsg1-4 [18.4 kB]
Get:241 http://172.17.0.1/private bullseye-staging/main armhf libarmadillo-dev armhf 1:9.600.5+dfsg-1 [372 kB]
Get:242 http://172.17.0.1/private bullseye-staging/main armhf libva2 armhf 2.5.0-1 [53.0 kB]
Get:243 http://172.17.0.1/private bullseye-staging/main armhf libva-drm2 armhf 2.5.0-1 [16.5 kB]
Get:244 http://172.17.0.1/private bullseye-staging/main armhf libxfixes3 armhf 1:5.0.3-1 [20.6 kB]
Get:245 http://172.17.0.1/private bullseye-staging/main armhf libva-x11-2 armhf 2.5.0-1 [19.9 kB]
Get:246 http://172.17.0.1/private bullseye-staging/main armhf libvdpau1 armhf 1.2-1 [41.1 kB]
Get:247 http://172.17.0.1/private bullseye-staging/main armhf libavutil56 armhf 7:4.1.4-1+b3 [235 kB]
Get:248 http://172.17.0.1/private bullseye-staging/main armhf libpixman-1-0 armhf 0.36.0-1 [458 kB]
Get:249 http://172.17.0.1/private bullseye-staging/main armhf libcairo2 armhf 1.16.0-4 [599 kB]
Get:250 http://172.17.0.1/private bullseye-staging/main armhf libcodec2-0.8.1 armhf 0.8.1-2 [214 kB]
Get:251 http://172.17.0.1/private bullseye-staging/main armhf libgsm1 armhf 1.0.18-2 [26.7 kB]
Get:252 http://172.17.0.1/private bullseye-staging/main armhf libmp3lame0 armhf 3.100-2 [348 kB]
Get:253 http://172.17.0.1/private bullseye-staging/main armhf libopenjp2-7 armhf 2.3.0-2 [138 kB]
Get:254 http://172.17.0.1/private bullseye-staging/main armhf libopus0 armhf 1.3-1 [169 kB]
Get:255 http://172.17.0.1/private bullseye-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:256 http://172.17.0.1/private bullseye-staging/main armhf libtiff5 armhf 4.0.10+git190818-1 [240 kB]
Get:257 http://172.17.0.1/private bullseye-staging/main armhf shared-mime-info armhf 1.10-1 [762 kB]
Get:258 http://172.17.0.1/private bullseye-staging/main armhf libgdk-pixbuf2.0-common all 2.38.1+dfsg-1 [316 kB]
Get:259 http://172.17.0.1/private bullseye-staging/main armhf libgdk-pixbuf2.0-0 armhf 2.38.1+dfsg-1 [157 kB]
Get:260 http://172.17.0.1/private bullseye-staging/main armhf libfribidi0 armhf 1.0.5-3.1 [62.1 kB]
Get:261 http://172.17.0.1/private bullseye-staging/main armhf libthai-data all 0.1.28-3 [170 kB]
Get:262 http://172.17.0.1/private bullseye-staging/main armhf libdatrie1 armhf 0.2.12-3 [36.1 kB]
Get:263 http://172.17.0.1/private bullseye-staging/main armhf libthai0 armhf 0.1.28-3 [51.0 kB]
Get:264 http://172.17.0.1/private bullseye-staging/main armhf libpango-1.0-0 armhf 1.42.4-7 [168 kB]
Get:265 http://172.17.0.1/private bullseye-staging/main armhf libpangoft2-1.0-0 armhf 1.42.4-7 [61.9 kB]
Get:266 http://172.17.0.1/private bullseye-staging/main armhf libpangocairo-1.0-0 armhf 1.42.4-7 [51.6 kB]
Get:267 http://172.17.0.1/private bullseye-staging/main armhf librsvg2-2 armhf 2.44.14-1 [924 kB]
Get:268 http://172.17.0.1/private bullseye-staging/main armhf libshine3 armhf 3.1.1-2+b1 [22.0 kB]
Get:269 http://172.17.0.1/private bullseye-staging/main armhf libsnappy1v5 armhf 1.1.7-1 [15.4 kB]
Get:270 http://172.17.0.1/private bullseye-staging/main armhf libsoxr0 armhf 0.1.2-3 [49.4 kB]
Get:271 http://172.17.0.1/private bullseye-staging/main armhf libswresample3 armhf 7:4.1.4-1+b3 [90.4 kB]
Get:272 http://172.17.0.1/private bullseye-staging/main armhf libtheora0 armhf 1.1.1+dfsg.1-15 [148 kB]
Get:273 http://172.17.0.1/private bullseye-staging/main armhf libtwolame0 armhf 0.3.13-4 [44.9 kB]
Get:274 http://172.17.0.1/private bullseye-staging/main armhf libvorbis0a armhf 1.3.6-2 [82.4 kB]
Get:275 http://172.17.0.1/private bullseye-staging/main armhf libvorbisenc2 armhf 1.3.6-2 [74.0 kB]
Get:276 http://172.17.0.1/private bullseye-staging/main armhf libvpx6 armhf 1.8.1-2 [1129 kB]
Get:277 http://172.17.0.1/private bullseye-staging/main armhf libwavpack1 armhf 5.1.0-7 [74.1 kB]
Get:278 http://172.17.0.1/private bullseye-staging/main armhf libwebpmux3 armhf 0.6.1-2 [94.2 kB]
Get:279 http://172.17.0.1/private bullseye-staging/main armhf libx264-155 armhf 2:0.155.2917+git0a84d98-2+rpi1 [713 kB]
Get:280 http://172.17.0.1/private bullseye-staging/main armhf libx265-176 armhf 3.1.1-2 [527 kB]
Get:281 http://172.17.0.1/private bullseye-staging/main armhf libxvidcore4 armhf 2:1.3.5-1 [197 kB]
Get:282 http://172.17.0.1/private bullseye-staging/main armhf libzvbi-common all 0.2.35-16 [64.3 kB]
Get:283 http://172.17.0.1/private bullseye-staging/main armhf libzvbi0 armhf 0.2.35-16 [237 kB]
Get:284 http://172.17.0.1/private bullseye-staging/main armhf libavcodec58 armhf 7:4.1.4-1+b3 [4374 kB]
Get:285 http://172.17.0.1/private bullseye-staging/main armhf libavutil-dev armhf 7:4.1.4-1+b3 [354 kB]
Get:286 http://172.17.0.1/private bullseye-staging/main armhf libswresample-dev armhf 7:4.1.4-1+b3 [99.5 kB]
Get:287 http://172.17.0.1/private bullseye-staging/main armhf libavcodec-dev armhf 7:4.1.4-1+b3 [4911 kB]
Get:288 http://172.17.0.1/private bullseye-staging/main armhf libbluray2 armhf 1:1.1.2-2 [128 kB]
Get:289 http://172.17.0.1/private bullseye-staging/main armhf libchromaprint1 armhf 1.4.3-3 [36.1 kB]
Get:290 http://172.17.0.1/private bullseye-staging/main armhf libgme0 armhf 0.6.2-1 [108 kB]
Get:291 http://172.17.0.1/private bullseye-staging/main armhf libmpg123-0 armhf 1.25.12-1 [119 kB]
Get:292 http://172.17.0.1/private bullseye-staging/main armhf libvorbisfile3 armhf 1.3.6-2 [24.6 kB]
Get:293 http://172.17.0.1/private bullseye-staging/main armhf libopenmpt0 armhf 0.4.6-1 [536 kB]
Get:294 http://172.17.0.1/private bullseye-staging/main armhf libssh-gcrypt-4 armhf 0.9.0-1 [180 kB]
Get:295 http://172.17.0.1/private bullseye-staging/main armhf libavformat58 armhf 7:4.1.4-1+b3 [916 kB]
Get:296 http://172.17.0.1/private bullseye-staging/main armhf libavformat-dev armhf 7:4.1.4-1+b3 [1158 kB]
Get:297 http://172.17.0.1/private bullseye-staging/main armhf libboost1.67-dev armhf 1.67.0-13 [8386 kB]
Get:298 http://172.17.0.1/private bullseye-staging/main armhf libboost-dev armhf 1.67.0.2 [4184 B]
Get:299 http://172.17.0.1/private bullseye-staging/main armhf libcharls2 armhf 2.0.0+dfsg-1 [52.0 kB]
Get:300 http://172.17.0.1/private bullseye-staging/main armhf libcharls-dev armhf 2.0.0+dfsg-1 [8016 B]
Get:301 http://172.17.0.1/private bullseye-staging/main armhf libcurl3-gnutls armhf 7.65.3-1 [298 kB]
Get:302 http://172.17.0.1/private bullseye-staging/main armhf libcurl4-gnutls-dev armhf 7.65.3-1 [370 kB]
Get:303 http://172.17.0.1/private bullseye-staging/main armhf libdap25 armhf 3.20.4-1 [469 kB]
Get:304 http://172.17.0.1/private bullseye-staging/main armhf libdapserver7v5 armhf 3.20.4-1 [129 kB]
Get:305 http://172.17.0.1/private bullseye-staging/main armhf libdapclient6v5 armhf 3.20.4-1 [187 kB]
Get:306 http://172.17.0.1/private bullseye-staging/main armhf libicu-dev armhf 63.2-2 [8846 kB]
Get:307 http://172.17.0.1/private bullseye-staging/main armhf libxml2-dev armhf 2.9.4+dfsg1-7+b2 [641 kB]
Get:308 http://172.17.0.1/private bullseye-staging/main armhf uuid-dev armhf 2.34-0.1 [92.5 kB]
Get:309 http://172.17.0.1/private bullseye-staging/main armhf pkg-config armhf 0.29-6 [59.8 kB]
Get:310 http://172.17.0.1/private bullseye-staging/main armhf libdap-dev armhf 3.20.4-1 [769 kB]
Get:311 http://172.17.0.1/private bullseye-staging/main armhf libdrm-amdgpu1 armhf 2.4.99-1+rpi1 [26.5 kB]
Get:312 http://172.17.0.1/private bullseye-staging/main armhf libdrm-radeon1 armhf 2.4.99-1+rpi1 [28.7 kB]
Get:313 http://172.17.0.1/private bullseye-staging/main armhf libdrm-nouveau2 armhf 2.4.99-1+rpi1 [24.5 kB]
Get:314 http://172.17.0.1/private bullseye-staging/main armhf libdrm-omap1 armhf 2.4.99-1+rpi1 [16.2 kB]
Get:315 http://172.17.0.1/private bullseye-staging/main armhf libdrm-freedreno1 armhf 2.4.99-1+rpi1 [26.0 kB]
Get:316 http://172.17.0.1/private bullseye-staging/main armhf libdrm-exynos1 armhf 2.4.99-1+rpi1 [19.2 kB]
Get:317 http://172.17.0.1/private bullseye-staging/main armhf libdrm-tegra0 armhf 2.4.99-1+rpi1 [15.6 kB]
Get:318 http://172.17.0.1/private bullseye-staging/main armhf libdrm-etnaviv1 armhf 2.4.99-1+rpi1 [20.0 kB]
Get:319 http://172.17.0.1/private bullseye-staging/main armhf libdrm-dev armhf 2.4.99-1+rpi1 [143 kB]
Get:320 http://172.17.0.1/private bullseye-staging/main armhf libeigen3-dev all 3.3.7-1 [850 kB]
Get:321 http://172.17.0.1/private bullseye-staging/main armhf libpopt0 armhf 1.16-12 [46.3 kB]
Get:322 http://172.17.0.1/private bullseye-staging/main armhf libepsilon1 armhf 0.9.2+dfsg-4 [36.4 kB]
Get:323 http://172.17.0.1/private bullseye-staging/main armhf libepsilon-dev armhf 0.9.2+dfsg-4 [46.0 kB]
Get:324 http://172.17.0.1/private bullseye-staging/main armhf libevent-core-2.1-6 armhf 2.1.8-stable-4 [117 kB]
Get:325 http://172.17.0.1/private bullseye-staging/main armhf libevent-pthreads-2.1-6 armhf 2.1.8-stable-4 [47.6 kB]
Get:326 http://172.17.0.1/private bullseye-staging/main armhf libexpat1-dev armhf 2.2.7-1 [128 kB]
Get:327 http://172.17.0.1/private bullseye-staging/main armhf libfftw3-double3 armhf 3.3.8-2 [429 kB]
Get:328 http://172.17.0.1/private bullseye-staging/main armhf libfftw3-single3 armhf 3.3.8-2 [633 kB]
Get:329 http://172.17.0.1/private bullseye-staging/main armhf libfftw3-bin armhf 3.3.8-2 [43.6 kB]
Get:330 http://172.17.0.1/private bullseye-staging/main armhf libfftw3-dev armhf 3.3.8-2 [1060 kB]
Get:331 http://172.17.0.1/private bullseye-staging/main armhf libpng-dev armhf 1.6.37-1 [275 kB]
Get:332 http://172.17.0.1/private bullseye-staging/main armhf libfreetype6-dev armhf 2.9.1-4 [479 kB]
Get:333 http://172.17.0.1/private bullseye-staging/main armhf libfontconfig1-dev armhf 2.13.1-2 [943 kB]
Get:334 http://172.17.0.1/private bullseye-staging/main armhf libfreexl1 armhf 1.0.5-3 [31.8 kB]
Get:335 http://172.17.0.1/private bullseye-staging/main armhf libfreexl-dev armhf 1.0.5-3 [30.3 kB]
Get:336 http://172.17.0.1/private bullseye-staging/main armhf libfyba0 armhf 4.1.1-6 [97.8 kB]
Get:337 http://172.17.0.1/private bullseye-staging/main armhf libfyba-dev armhf 4.1.1-6 [161 kB]
Get:338 http://172.17.0.1/private bullseye-staging/main armhf libgeos-3.7.2 armhf 3.7.2-1 [638 kB]
Get:339 http://172.17.0.1/private bullseye-staging/main armhf libgeos-c1v5 armhf 3.7.2-1 [290 kB]
Get:340 http://172.17.0.1/private bullseye-staging/main armhf proj-data all 6.2.0-1 [7620 kB]
Get:341 http://172.17.0.1/private bullseye-staging/main armhf libproj15 armhf 6.2.0-1 [689 kB]
Get:342 http://172.17.0.1/private bullseye-staging/main armhf libgeotiff5 armhf 1.5.1-2 [62.7 kB]
Get:343 http://172.17.0.1/private bullseye-staging/main armhf libgif7 armhf 5.1.4-3 [41.0 kB]
Get:344 http://172.17.0.1/private bullseye-staging/main armhf libhdf4-0-alt armhf 4.2.14-1 [234 kB]
Get:345 http://172.17.0.1/private bullseye-staging/main armhf libjson-c4 armhf 0.13.1+dfsg-4 [32.7 kB]
Get:346 http://172.17.0.1/private bullseye-staging/main armhf libminizip1 armhf 1.1-8 [18.3 kB]
Get:347 http://172.17.0.1/private bullseye-staging/main armhf liburiparser1 armhf 0.9.3-2 [39.2 kB]
Get:348 http://172.17.0.1/private bullseye-staging/main armhf libkmlbase1 armhf 1.3.0-8 [41.6 kB]
Get:349 http://172.17.0.1/private bullseye-staging/main armhf libkmldom1 armhf 1.3.0-8 [150 kB]
Get:350 http://172.17.0.1/private bullseye-staging/main armhf libkmlengine1 armhf 1.3.0-8 [66.1 kB]
Get:351 http://172.17.0.1/private bullseye-staging/main armhf libkmlconvenience1 armhf 1.3.0-8 [44.0 kB]
Get:352 http://172.17.0.1/private bullseye-staging/main armhf libkmlregionator1 armhf 1.3.0-8 [22.6 kB]
Get:353 http://172.17.0.1/private bullseye-staging/main armhf libkmlxsd1 armhf 1.3.0-8 [30.4 kB]
Get:354 http://172.17.0.1/private bullseye-staging/main armhf libnetcdf13 armhf 1:4.6.2-1+b1 [352 kB]
Get:355 http://172.17.0.1/private bullseye-staging/main armhf libltdl7 armhf 2.4.6-9 [387 kB]
Get:356 http://172.17.0.1/private bullseye-staging/main armhf libodbc1 armhf 2.3.6-0.1+b1 [187 kB]
Get:357 http://172.17.0.1/private bullseye-staging/main armhf libogdi4.1 armhf 4.1.0+ds-1 [170 kB]
Get:358 http://172.17.0.1/private bullseye-staging/main armhf liblcms2-2 armhf 2.9-3 [116 kB]
Get:359 http://172.17.0.1/private bullseye-staging/main armhf libnspr4 armhf 2:4.21-2 [89.6 kB]
Get:360 http://172.17.0.1/private bullseye-staging/main armhf libnss3 armhf 2:3.45-1 [957 kB]
Get:361 http://172.17.0.1/private bullseye-staging/main armhf libpoppler82 armhf 0.71.0-5 [1356 kB]
Get:362 http://172.17.0.1/private bullseye-staging/main armhf libpq5 armhf 11.5-2 [151 kB]
Get:363 http://172.17.0.1/private bullseye-staging/main armhf libqhull7 armhf 2015.2-4 [175 kB]
Get:364 http://172.17.0.1/private bullseye-staging/main armhf libspatialite7 armhf 4.3.0a-6+b2 [1231 kB]
Get:365 http://172.17.0.1/private bullseye-staging/main armhf libxerces-c3.2 armhf 3.2.2+debian-1+b1 [707 kB]
Get:366 http://172.17.0.1/private bullseye-staging/main armhf odbcinst armhf 2.3.6-0.1+b1 [47.7 kB]
Get:367 http://172.17.0.1/private bullseye-staging/main armhf odbcinst1debian2 armhf 2.3.6-0.1+b1 [70.8 kB]
Get:368 http://172.17.0.1/private bullseye-staging/main armhf libgdal20 armhf 2.4.2+dfsg-1+b2 [5082 kB]
Get:369 http://172.17.0.1/private bullseye-staging/main armhf libgeos-dev armhf 3.7.2-1 [312 kB]
Get:370 http://172.17.0.1/private bullseye-staging/main armhf libsqlite3-dev armhf 3.29.0-2 [693 kB]
Get:371 http://172.17.0.1/private bullseye-staging/main armhf libproj-dev armhf 6.2.0-1 [882 kB]
Get:372 http://172.17.0.1/private bullseye-staging/main armhf libjbig-dev armhf 2.1-3.1+b2 [27.7 kB]
Get:373 http://172.17.0.1/private bullseye-staging/main armhf liblzma-dev armhf 5.2.4-1 [203 kB]
Get:374 http://172.17.0.1/private bullseye-staging/main armhf libtiffxx5 armhf 4.0.10+git190818-1 [108 kB]
Get:375 http://172.17.0.1/private bullseye-staging/main armhf libtiff-dev armhf 4.0.10+git190818-1 [351 kB]
Get:376 http://172.17.0.1/private bullseye-staging/main armhf libgeotiff-dev armhf 1.5.1-2 [89.5 kB]
Get:377 http://172.17.0.1/private bullseye-staging/main armhf libgif-dev armhf 5.1.4-3 [43.4 kB]
Get:378 http://172.17.0.1/private bullseye-staging/main armhf libnetcdf-dev armhf 1:4.6.2-1+b1 [83.0 kB]
Get:379 http://172.17.0.1/private bullseye-staging/main armhf libhdf4-alt-dev armhf 4.2.14-1 [311 kB]
Get:380 http://172.17.0.1/private bullseye-staging/main armhf libjson-c-dev armhf 0.13.1+dfsg-4 [51.4 kB]
Get:381 http://172.17.0.1/private bullseye-staging/main armhf libminizip-dev armhf 1.1-8 [25.6 kB]
Get:382 http://172.17.0.1/private bullseye-staging/main armhf liburiparser-dev armhf 0.9.3-2 [22.0 kB]
Get:383 http://172.17.0.1/private bullseye-staging/main armhf libkml-dev armhf 1.3.0-8 [940 kB]
Get:384 http://172.17.0.1/private bullseye-staging/main armhf libltdl-dev armhf 2.4.6-9 [159 kB]
Get:385 http://172.17.0.1/private bullseye-staging/main armhf libogdi-dev armhf 4.1.0+ds-1 [37.1 kB]
Get:386 http://172.17.0.1/private bullseye-staging/main armhf libopenjp2-7-dev armhf 2.3.0-2 [44.2 kB]
Get:387 http://172.17.0.1/private bullseye-staging/main armhf libpcre16-3 armhf 2:8.39-12 [234 kB]
Get:388 http://172.17.0.1/private bullseye-staging/main armhf libpcre32-3 armhf 2:8.39-12 [227 kB]
Get:389 http://172.17.0.1/private bullseye-staging/main armhf libpcrecpp0v5 armhf 2:8.39-12 [150 kB]
Get:390 http://172.17.0.1/private bullseye-staging/main armhf libpcre3-dev armhf 2:8.39-12 [564 kB]
Get:391 http://172.17.0.1/private bullseye-staging/main armhf libpoppler-dev armhf 0.71.0-5 [23.7 kB]
Get:392 http://172.17.0.1/private bullseye-staging/main armhf libpoppler-private-dev armhf 0.71.0-5 [187 kB]
Get:393 http://172.17.0.1/private bullseye-staging/main armhf libpq-dev armhf 11.5-2 [149 kB]
Get:394 http://172.17.0.1/private bullseye-staging/main armhf libqhull-r7 armhf 2015.2-4 [171 kB]
Get:395 http://172.17.0.1/private bullseye-staging/main armhf libqhull-dev armhf 2015.2-4 [346 kB]
Get:396 http://172.17.0.1/private bullseye-staging/main armhf libspatialite-dev armhf 4.3.0a-6+b2 [1455 kB]
Get:397 http://172.17.0.1/private bullseye-staging/main armhf libwebpdemux2 armhf 0.6.1-2 [86.7 kB]
Get:398 http://172.17.0.1/private bullseye-staging/main armhf libwebp-dev armhf 0.6.1-2 [304 kB]
Get:399 http://172.17.0.1/private bullseye-staging/main armhf libxerces-c-dev armhf 3.2.2+debian-1+b1 [1466 kB]
Get:400 http://172.17.0.1/private bullseye-staging/main armhf libzstd-dev armhf 1.4.3+dfsg-1+rpi1 [252 kB]
Get:401 http://172.17.0.1/private bullseye-staging/main armhf unixodbc-dev armhf 2.3.6-0.1+b1 [232 kB]
Get:402 http://172.17.0.1/private bullseye-staging/main armhf libgdal-dev armhf 2.4.2+dfsg-1+b2 [6614 kB]
Get:403 http://172.17.0.1/private bullseye-staging/main armhf libxcb-glx0 armhf 1.13.1-2 [114 kB]
Get:404 http://172.17.0.1/private bullseye-staging/main armhf libxdamage1 armhf 1:1.1.5-1 [15.1 kB]
Get:405 http://172.17.0.1/private bullseye-staging/main armhf libxxf86vm1 armhf 1:1.1.4-1+b2 [20.1 kB]
Get:406 http://172.17.0.1/private bullseye-staging/main armhf libllvm8 armhf 1:8.0.1~+rc4-1+rpi1 [12.1 MB]
Get:407 http://172.17.0.1/private bullseye-staging/main armhf libsensors-config all 1:3.5.0-3 [31.6 kB]
Get:408 http://172.17.0.1/private bullseye-staging/main armhf libsensors5 armhf 1:3.5.0-3 [49.5 kB]
Get:409 http://172.17.0.1/private bullseye-staging/main armhf libgl1-mesa-dri armhf 19.1.4-1 [4557 kB]
Get:410 http://172.17.0.1/private bullseye-staging/main armhf libglx-mesa0 armhf 19.1.4-1 [165 kB]
Get:411 http://172.17.0.1/private bullseye-staging/main armhf libglx0 armhf 1.1.0-1 [24.6 kB]
Get:412 http://172.17.0.1/private bullseye-staging/main armhf libgl1 armhf 1.1.0-1 [107 kB]
Get:413 http://172.17.0.1/private bullseye-staging/main armhf xorg-sgml-doctools all 1:1.11-1 [21.9 kB]
Get:414 http://172.17.0.1/private bullseye-staging/main armhf x11proto-dev all 2018.4-4 [251 kB]
Get:415 http://172.17.0.1/private bullseye-staging/main armhf x11proto-core-dev all 2018.4-4 [3128 B]
Get:416 http://172.17.0.1/private bullseye-staging/main armhf libxau-dev armhf 1:1.0.8-1+b2 [22.4 kB]
Get:417 http://172.17.0.1/private bullseye-staging/main armhf libxdmcp-dev armhf 1:1.1.2-3 [40.9 kB]
Get:418 http://172.17.0.1/private bullseye-staging/main armhf xtrans-dev all 1.3.5-1 [100 kB]
Get:419 http://172.17.0.1/private bullseye-staging/main armhf libpthread-stubs0-dev armhf 0.4-1 [5344 B]
Get:420 http://172.17.0.1/private bullseye-staging/main armhf libxcb1-dev armhf 1.13.1-2 [169 kB]
Get:421 http://172.17.0.1/private bullseye-staging/main armhf libx11-dev armhf 2:1.6.7-1 [760 kB]
Get:422 http://172.17.0.1/private bullseye-staging/main armhf mesa-common-dev armhf 19.1.4-1 [692 kB]
Get:423 http://172.17.0.1/private bullseye-staging/main armhf libglvnd-core-dev armhf 1.1.0-1 [13.2 kB]
Get:424 http://172.17.0.1/private bullseye-staging/main armhf libgles1 armhf 1.1.0-1 [13.8 kB]
Get:425 http://172.17.0.1/private bullseye-staging/main armhf libopengl0 armhf 1.1.0-1 [40.3 kB]
Get:426 http://172.17.0.1/private bullseye-staging/main armhf libglvnd-dev armhf 1.1.0-1 [5132 B]
Get:427 http://172.17.0.1/private bullseye-staging/main armhf libx11-xcb-dev armhf 2:1.6.7-1 [192 kB]
Get:428 http://172.17.0.1/private bullseye-staging/main armhf libxcb-dri3-dev armhf 1.13.1-2 [101 kB]
Get:429 http://172.17.0.1/private bullseye-staging/main armhf libxcb-render0-dev armhf 1.13.1-2 [111 kB]
Get:430 http://172.17.0.1/private bullseye-staging/main armhf libxcb-randr0-dev armhf 1.13.1-2 [113 kB]
Get:431 http://172.17.0.1/private bullseye-staging/main armhf libxcb-shape0-dev armhf 1.13.1-2 [101 kB]
Get:432 http://172.17.0.1/private bullseye-staging/main armhf libxcb-xfixes0-dev armhf 1.13.1-2 [105 kB]
Get:433 http://172.17.0.1/private bullseye-staging/main armhf libxcb-sync-dev armhf 1.13.1-2 [104 kB]
Get:434 http://172.17.0.1/private bullseye-staging/main armhf libxcb-present-dev armhf 1.13.1-2 [101 kB]
Get:435 http://172.17.0.1/private bullseye-staging/main armhf libxshmfence-dev armhf 1.3-1 [8224 B]
Get:436 http://172.17.0.1/private bullseye-staging/main armhf libxcb-dri2-0-dev armhf 1.13.1-2 [102 kB]
Get:437 http://172.17.0.1/private bullseye-staging/main armhf libxcb-glx0-dev armhf 1.13.1-2 [120 kB]
Get:438 http://172.17.0.1/private bullseye-staging/main armhf x11proto-fixes-dev all 1:2018.4-4 [3140 B]
Get:439 http://172.17.0.1/private bullseye-staging/main armhf libxfixes-dev armhf 1:5.0.3-1 [22.7 kB]
Get:440 http://172.17.0.1/private bullseye-staging/main armhf x11proto-damage-dev all 1:2018.4-4 [3140 B]
Get:441 http://172.17.0.1/private bullseye-staging/main armhf libxdamage-dev armhf 1:1.1.5-1 [15.0 kB]
Get:442 http://172.17.0.1/private bullseye-staging/main armhf x11proto-xext-dev all 2018.4-4 [3128 B]
Get:443 http://172.17.0.1/private bullseye-staging/main armhf libxext-dev armhf 2:1.3.3-1+b2 [102 kB]
Get:444 http://172.17.0.1/private bullseye-staging/main armhf x11proto-xf86vidmode-dev all 2018.4-4 [3140 B]
Get:445 http://172.17.0.1/private bullseye-staging/main armhf libxxf86vm-dev armhf 1:1.1.4-1+b2 [24.9 kB]
Get:446 http://172.17.0.1/private bullseye-staging/main armhf libgl1-mesa-dev armhf 19.1.4-1 [48.5 kB]
Get:447 http://172.17.0.1/private bullseye-staging/main armhf libgl2ps1.4 armhf 1.4.0+dfsg1-2 [34.2 kB]
Get:448 http://172.17.0.1/private bullseye-staging/main armhf libgl2ps-dev armhf 1.4.0+dfsg1-2 [14.8 kB]
Get:449 http://172.17.0.1/private bullseye-staging/main armhf libglu1-mesa armhf 9.0.0-2.1 [130 kB]
Get:450 http://172.17.0.1/private bullseye-staging/main armhf libglu1-mesa-dev armhf 9.0.0-2.1 [169 kB]
Get:451 http://172.17.0.1/private bullseye-staging/main armhf libhwloc5 armhf 1.11.13-1+rpi1 [87.4 kB]
Get:452 http://172.17.0.1/private bullseye-staging/main armhf libpciaccess0 armhf 0.14-1 [51.0 kB]
Get:453 http://172.17.0.1/private bullseye-staging/main armhf ocl-icd-libopencl1 armhf 2.2.12-2 [35.7 kB]
Get:454 http://172.17.0.1/private bullseye-staging/main armhf libhwloc-plugins armhf 1.11.13-1+rpi1 [16.1 kB]
Get:455 http://172.17.0.1/private bullseye-staging/main armhf libpmix2 armhf 3.1.4-1 [433 kB]
Get:456 http://172.17.0.1/private bullseye-staging/main armhf libopenmpi3 armhf 3.1.3-11+rpi1 [1813 kB]
Get:457 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-openmpi-103 armhf 1.10.4+repack-10 [1306 kB]
Get:458 http://172.17.0.1/private bullseye-staging/main armhf openmpi-common all 3.1.3-11+rpi1 [164 kB]
Get:459 http://172.17.0.1/private bullseye-staging/main armhf libnl-3-dev armhf 3.4.0-1 [92.4 kB]
Get:460 http://172.17.0.1/private bullseye-staging/main armhf libnl-route-3-dev armhf 3.4.0-1 [145 kB]
Get:461 http://172.17.0.1/private bullseye-staging/main armhf libibverbs-dev armhf 24.0-2 [187 kB]
Get:462 http://172.17.0.1/private bullseye-staging/main armhf libhwloc-dev armhf 1.11.13-1+rpi1 [143 kB]
Get:463 http://172.17.0.1/private bullseye-staging/main armhf openmpi-bin armhf 3.1.3-11+rpi1 [197 kB]
Get:464 http://172.17.0.1/private bullseye-staging/main armhf libopenmpi-dev armhf 3.1.3-11+rpi1 [964 kB]
Get:465 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-openmpi-dev armhf 1.10.4+repack-10 [2181 kB]
Get:466 http://172.17.0.1/private bullseye-staging/main armhf mpi-default-dev armhf 1.13 [5476 B]
Get:467 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-mpi-dev armhf 1.10.4+repack-10 [27.3 kB]
Get:468 http://172.17.0.1/private bullseye-staging/main armhf libice-dev armhf 2:1.0.9-2 [58.8 kB]
Get:469 http://172.17.0.1/private bullseye-staging/main armhf libjs-jquery all 3.3.1~dfsg-3 [332 kB]
Get:470 http://172.17.0.1/private bullseye-staging/main armhf libjs-underscore all 1.9.1~dfsg-1 [99.4 kB]
Get:471 http://172.17.0.1/private bullseye-staging/main armhf libjs-sphinxdoc all 1.8.5-3 [96.5 kB]
Get:472 http://172.17.0.1/private bullseye-staging/main armhf libnetcdf-c++4 armhf 4.2-11 [28.3 kB]
Get:473 http://172.17.0.1/private bullseye-staging/main armhf libnetcdf-cxx-legacy-dev armhf 4.2-11 [51.0 kB]
Get:474 http://172.17.0.1/private bullseye-staging/main armhf libogg-dev armhf 1.3.2-1 [195 kB]
Get:475 http://172.17.0.1/private bullseye-staging/main armhf libpython2.7 armhf 2.7.16-3 [873 kB]
Get:476 http://172.17.0.1/private bullseye-staging/main armhf libpython2.7-dev armhf 2.7.16-3 [30.9 MB]
Get:477 http://172.17.0.1/private bullseye-staging/main armhf libpython2-dev armhf 2.7.16-1 [20.9 kB]
Get:478 http://172.17.0.1/private bullseye-staging/main armhf libpython-dev armhf 2.7.16-1 [20.9 kB]
Get:479 http://172.17.0.1/private bullseye-staging/main armhf libqt5opengl5 armhf 5.11.3+dfsg1-4+rpi1 [137 kB]
Get:480 http://172.17.0.1/private bullseye-staging/main armhf libsm-dev armhf 2:1.2.3-1 [35.4 kB]
Get:481 http://172.17.0.1/private bullseye-staging/main armhf libsodium23 armhf 1.0.18-1 [143 kB]
Get:482 http://172.17.0.1/private bullseye-staging/main armhf libswscale5 armhf 7:4.1.4-1+b3 [165 kB]
Get:483 http://172.17.0.1/private bullseye-staging/main armhf libswscale-dev armhf 7:4.1.4-1+b3 [179 kB]
Get:484 http://172.17.0.1/private bullseye-staging/main armhf libsymspg1 armhf 1.13.0-1 [75.5 kB]
Get:485 http://172.17.0.1/private bullseye-staging/main armhf libsymspg-dev armhf 1.13.0-1 [83.6 kB]
Get:486 http://172.17.0.1/private bullseye-staging/main armhf libtheora-dev armhf 1.1.1+dfsg.1-15 [164 kB]
Get:487 http://172.17.0.1/private bullseye-staging/main armhf libvoro++1 armhf 0.4.6+dfsg1-3 [91.4 kB]
Get:488 http://172.17.0.1/private bullseye-staging/main armhf libjsoncpp-dev armhf 1.7.4-3 [78.6 kB]
Get:489 http://172.17.0.1/private bullseye-staging/main armhf libxt6 armhf 1:1.1.5-1 [155 kB]
Get:490 http://172.17.0.1/private bullseye-staging/main armhf libvtk6.3 armhf 6.3.0+dfsg2-3 [22.0 MB]
Get:491 http://172.17.0.1/private bullseye-staging/main armhf libxft2 armhf 2.3.2-2 [49.3 kB]
Get:492 http://172.17.0.1/private bullseye-staging/main armhf libxrender-dev armhf 1:0.9.10-1 [37.7 kB]
Get:493 http://172.17.0.1/private bullseye-staging/main armhf libxft-dev armhf 2.3.2-2 [60.3 kB]
Get:494 http://172.17.0.1/private bullseye-staging/main armhf libxss1 armhf 1:1.2.3-1 [17.3 kB]
Get:495 http://172.17.0.1/private bullseye-staging/main armhf x11proto-scrnsaver-dev all 2018.4-4 [3136 B]
Get:496 http://172.17.0.1/private bullseye-staging/main armhf libxss-dev armhf 1:1.2.3-1 [23.0 kB]
Get:497 http://172.17.0.1/private bullseye-staging/main armhf libxt-dev armhf 1:1.1.5-1 [390 kB]
Get:498 http://172.17.0.1/private bullseye-staging/main armhf libvtk6.3-qt armhf 6.3.0+dfsg2-3 [208 kB]
Get:499 http://172.17.0.1/private bullseye-staging/main armhf python-cbor armhf 1.0.0-1+b1 [19.7 kB]
Get:500 http://172.17.0.1/private bullseye-staging/main armhf python-concurrent.futures all 3.3.0-1 [39.8 kB]
Get:501 http://172.17.0.1/private bullseye-staging/main armhf python-configparser all 3.5.0b2-3 [62.6 kB]
Get:502 http://172.17.0.1/private bullseye-staging/main armhf python-future all 0.16.0-1 [348 kB]
Get:503 http://172.17.0.1/private bullseye-staging/main armhf python-lz4 armhf 2.1.10+dfsg-1 [24.5 kB]
Get:504 http://172.17.0.1/private bullseye-staging/main armhf python-cffi-backend armhf 1.12.3-1 [69.8 kB]
Get:505 http://172.17.0.1/private bullseye-staging/main armhf python-six all 1.12.0-2 [15.7 kB]
Get:506 http://172.17.0.1/private bullseye-staging/main armhf python-nacl armhf 1.3.0-2 [43.6 kB]
Get:507 http://172.17.0.1/private bullseye-staging/main armhf python-asn1crypto all 0.24.0-1 [78.1 kB]
Get:508 http://172.17.0.1/private bullseye-staging/main armhf python-enum34 all 1.1.6-2 [35.3 kB]
Get:509 http://172.17.0.1/private bullseye-staging/main armhf python-ipaddress all 1.0.17-1 [18.1 kB]
Get:510 http://172.17.0.1/private bullseye-staging/main armhf python-cryptography armhf 2.6.1-3 [183 kB]
Get:511 http://172.17.0.1/private bullseye-staging/main armhf python-openssl all 19.0.0-1 [52.0 kB]
Get:512 http://172.17.0.1/private bullseye-staging/main armhf python-pyqrcode all 1.2.1-2 [30.1 kB]
Get:513 http://172.17.0.1/private bullseye-staging/main armhf python-attr all 18.2.0-1 [37.2 kB]
Get:514 http://172.17.0.1/private bullseye-staging/main armhf python-pyasn1 all 0.4.2-3 [57.6 kB]
Get:515 http://172.17.0.1/private bullseye-staging/main armhf python-pyasn1-modules all 0.2.1-0.2 [34.4 kB]
Get:516 http://172.17.0.1/private bullseye-staging/main armhf python-service-identity all 18.1.0-5 [12.4 kB]
Get:517 http://172.17.0.1/private bullseye-staging/main armhf python-snappy armhf 0.5.3-1+b1 [16.4 kB]
Get:518 http://172.17.0.1/private bullseye-staging/main armhf python-trie all 0.2+ds-1 [7034 B]
Get:519 http://172.17.0.1/private bullseye-staging/main armhf python-trollius all 2.1~b1-5 [95.0 kB]
Get:520 http://172.17.0.1/private bullseye-staging/main armhf python-twisted-bin armhf 18.9.0-3 [21.8 kB]
Get:521 http://172.17.0.1/private bullseye-staging/main armhf python-pkg-resources all 41.1.0-1 [183 kB]
Get:522 http://172.17.0.1/private bullseye-staging/main armhf python-zope.interface armhf 4.3.2-1+b2 [88.3 kB]
Get:523 http://172.17.0.1/private bullseye-staging/main armhf python-automat all 0.6.0-1 [25.0 kB]
Get:524 http://172.17.0.1/private bullseye-staging/main armhf python-constantly all 15.1.0-1 [7902 B]
Get:525 http://172.17.0.1/private bullseye-staging/main armhf python-hyperlink all 17.3.1-2 [29.2 kB]
Get:526 http://172.17.0.1/private bullseye-staging/main armhf python-incremental all 16.10.1-3 [14.4 kB]
Get:527 http://172.17.0.1/private bullseye-staging/main armhf python-twisted-core all 18.9.0-3 [1997 kB]
Get:528 http://172.17.0.1/private bullseye-staging/main armhf python-twisted all 18.9.0-3 [13.4 kB]
Get:529 http://172.17.0.1/private bullseye-staging/main armhf python-txaio all 2.10.0-1 [18.7 kB]
Get:530 http://172.17.0.1/private bullseye-staging/main armhf python-u-msgpack all 2.1-1 [7226 B]
Get:531 http://172.17.0.1/private bullseye-staging/main armhf python-ubjson armhf 0.14.0-1 [31.4 kB]
Get:532 http://172.17.0.1/private bullseye-staging/main armhf python-wsaccel armhf 0.6.2-1+b1 [34.9 kB]
Get:533 http://172.17.0.1/private bullseye-staging/main armhf python-autobahn all 17.10.1+dfsg1-5 [163 kB]
Get:534 http://172.17.0.1/private bullseye-staging/main armhf mpi-default-bin armhf 1.13 [4672 B]
Get:535 http://172.17.0.1/private bullseye-staging/main armhf python-mpi4py armhf 3.0.2-13 [375 kB]
Get:536 http://172.17.0.1/private bullseye-staging/main armhf python-vtk6 armhf 6.3.0+dfsg2-3 [230 kB]
Get:537 http://172.17.0.1/private bullseye-staging/main armhf libvtk6-dev armhf 6.3.0+dfsg2-3 [2099 kB]
Get:538 http://172.17.0.1/private bullseye-staging/main armhf opencl-c-headers all 2.2~2019.01.17-g49f07d3-1 [31.3 kB]
Get:539 http://172.17.0.1/private bullseye-staging/main armhf ocl-icd-opencl-dev armhf 2.2.12-2 [10.7 kB]
Get:540 http://172.17.0.1/private bullseye-staging/main armhf voro++-dev armhf 0.4.6+dfsg1-3 [126 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Selecting previously unselected package libbsd0:armhf.
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Setting up libgcc1:armhf (1:9.2.1-4+rpi1) ...
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Setting up libstdc++6:armhf (9.2.1-4+rpi1) ...
Selecting previously unselected package libuchardet0:armhf.
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Setting up multiarch-support (2.28-10+rpi1) ...
Selecting previously unselected package libmtdev1:armhf.
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Setting up libuuid1:armhf (2.34-0.1) ...
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Setting up libxcb-icccm4:armhf (0.4.1-1.1) ...
Setting up binutils (2.32.51.20190821-2+rpi1) ...
Setting up libxcb-util0:armhf (0.3.8-3) ...
Setting up libepsilon1:armhf (0.9.2+dfsg-4) ...
Setting up libhwloc-plugins:armhf (1.11.13-1+rpi1) ...
Setting up libdapserver7v5:armhf (3.20.4-1) ...
Setting up python2 (2.7.16-1) ...
Setting up libqt5network5:armhf (5.11.3+dfsg1-4+rpi1) ...
Setting up libgeotiff5:armhf (1.5.1-2) ...
Setting up libxcb-xkb1:armhf (1.13.1-2) ...
Setting up libxcb-image0:armhf (0.4.0-1+b2) ...
Setting up liburiparser-dev (0.9.3-2) ...
Setting up libnl-route-3-200:armhf (3.4.0-1) ...
Setting up libxcb-present0:armhf (1.13.1-2) ...
Setting up libgcc-9-dev:armhf (9.2.1-4+rpi1) ...
Setting up libthai0:armhf (0.1.28-3) ...
Setting up libvorbisfile3:armhf (1.3.6-2) ...
Setting up libpython-stdlib:armhf (2.7.16-1) ...
Setting up libxdmcp-dev:armhf (1:1.1.2-3) ...
Setting up libxml2-dev:armhf (2.9.4+dfsg1-7+b2) ...
Setting up libblas3:armhf (3.8.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up libwebp-dev:armhf (0.6.1-2) ...
Setting up libxcb-xinerama0:armhf (1.13.1-2) ...
Setting up libunbound8:armhf (1.9.3-1) ...
Setting up x11proto-damage-dev (1:2018.4-4) ...
Setting up libfreetype6:armhf (2.9.1-4) ...
Setting up libtiff-dev:armhf (4.0.10+git190818-1) ...
Setting up libopenjp2-7-dev (2.3.0-2) ...
Setting up libxcb-sync1:armhf (1.13.1-2) ...
Setting up libqt5qml5:armhf (5.11.3-4) ...
Setting up libkmlregionator1:armhf (1.3.0-8) ...
Setting up x11proto-core-dev (2018.4-4) ...
Setting up libgeos-dev (3.7.2-1) ...
Setting up libhdf5-103:armhf (1.10.4+repack-10) ...
Setting up shared-mime-info (1.10-1) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up libxkbcommon-x11-0:armhf (0.8.2-1) ...
Setting up libproj-dev:armhf (6.2.0-1) ...
Setting up libeigen3-dev (3.3.7-1) ...
Setting up libgssapi-krb5-2:armhf (1.17-6+b1) ...
Setting up libcroco3:armhf (0.6.13-1) ...
Setting up libodbc1:armhf (2.3.6-0.1+b1) ...
Setting up libqt5webchannel5:armhf (5.11.3-2) ...
Setting up ucf (3.0038+nmu1) ...
Setting up libspatialite-dev:armhf (4.3.0a-6+b2) ...
Setting up libjs-sphinxdoc (1.8.5-3) ...
Setting up libqhull-dev:armhf (2015.2-4) ...
Setting up ocl-icd-opencl-dev:armhf (2.2.12-2) ...
Setting up autoconf (2.69-11) ...
Setting up libxcb-dri2-0:armhf (1.13.1-2) ...
Setting up x11proto-xf86vidmode-dev (2018.4-4) ...
Setting up x11proto-xext-dev (2018.4-4) ...
Setting up libdrm2:armhf (2.4.99-1+rpi1) ...
Setting up dwz (0.13-1) ...
Setting up libnl-3-dev:armhf (3.4.0-1) ...
Setting up libva-drm2:armhf (2.5.0-1) ...
Setting up groff-base (1.22.4-3) ...
Setting up libxcb-randr0:armhf (1.13.1-2) ...
Setting up cpp (4:9.2.1-3+rpi1) ...
Setting up libxslt1.1:armhf (1.1.32-2.1) ...
Setting up libcurl4:armhf (7.65.3-1) ...
Setting up libx11-6:armhf (2:1.6.7-1) ...
Setting up libharfbuzz0b:armhf (2.6.1-2) ...
Setting up libpython2-dev:armhf (2.7.16-1) ...
Setting up libdrm-omap1:armhf (2.4.99-1+rpi1) ...
Setting up libepsilon-dev:armhf (0.9.2+dfsg-4) ...
Setting up x11proto-fixes-dev (1:2018.4-4) ...
Setting up x11proto-scrnsaver-dev (2018.4-4) ...
Setting up libwacom2:armhf (0.32-1) ...
Setting up libsm6:armhf (2:1.2.3-1) ...
Setting up python (2.7.16-1) ...
Setting up python-trie (0.2+ds-1) ...
Setting up libfftw3-dev:armhf (3.3.8-2) ...
Setting up libopenmpt0:armhf (0.4.6-1) ...
Setting up libavahi-client3:armhf (0.7-4+b2) ...
Setting up libdrm-exynos1:armhf (2.4.99-1+rpi1) ...
Setting up python-incremental (16.10.1-3) ...
Setting up python-constantly (15.1.0-1) ...
Setting up libblas-dev:armhf (3.8.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode
Setting up python-hyperlink (17.3.1-2) ...
Setting up python-ipaddress (1.0.17-1) ...
Setting up libdrm-amdgpu1:armhf (2.4.99-1+rpi1) ...
Setting up python-cffi-backend (1.12.3-1) ...
Setting up libssh-gcrypt-4:armhf (0.9.0-1) ...
Setting up automake (1:1.16.1-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libllvm8:armhf (1:8.0.1~+rc4-1+rpi1) ...
Setting up libkml-dev:armhf (1.3.0-8) ...
Setting up libxcb-dri3-0:armhf (1.13.1-2) ...
Setting up python-enum34 (1.1.6-2) ...
Setting up gcc-9 (9.2.1-4+rpi1) ...
Setting up cython (0.29.2-2) ...
Setting up libibverbs1:armhf (24.0-2) ...
Setting up libgnutls-dane0:armhf (3.6.9-4) ...
Setting up liblapack3:armhf (3.8.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libdrm-nouveau2:armhf (2.4.99-1+rpi1) ...
Setting up gettext (0.19.8.1-9) ...
Setting up libdrm-etnaviv1:armhf (2.4.99-1+rpi1) ...
Setting up libxcb1-dev:armhf (1.13.1-2) ...
Setting up libstdc++-9-dev:armhf (9.2.1-4+rpi1) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up libpmix2:armhf (3.1.4-1) ...
Setting up libgbm1:armhf (19.1.4-1) ...
Setting up ibverbs-providers:armhf (24.0-2) ...
Setting up libtool (2.4.6-9) ...
Setting up python-cbor (1.0.0-1+b1) ...
Setting up libgeotiff-dev:armhf (1.5.1-2) ...
Setting up libsm-dev:armhf (2:1.2.3-1) ...
Setting up libdrm-radeon1:armhf (2.4.99-1+rpi1) ...
Setting up python-pkg-resources (41.1.0-1) ...
Setting up fontconfig-config (2.13.1-2) ...
Setting up openssh-client (1:8.0p1-6) ...
Setting up libopenmpi3:armhf (3.1.3-11+rpi1) ...
Setting up libgl1-mesa-dri:armhf (19.1.4-1) ...
Setting up python-pyqrcode (1.2.1-2) ...
Setting up libhdf5-cpp-103:armhf (1.10.4+repack-10) ...
Setting up libarpack2:armhf (3.7.0-2) ...
Setting up libpq5:armhf (11.5-2) ...
Setting up libx11-dev:armhf (2:1.6.7-1) ...
Setting up libsuperlu5:armhf (5.2.1+dfsg1-4) ...
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up libgfortran-9-dev:armhf (9.2.1-4+rpi1) ...
Setting up libxcb-dri3-dev:armhf (1.13.1-2) ...
Setting up libpq-dev (11.5-2) ...
Setting up libcurl3-gnutls:armhf (7.65.3-1) ...
Setting up libnetcdf13:armhf (1:4.6.2-1+b1) ...
Setting up python-asn1crypto (0.24.0-1) ...
Setting up libcurl4-gnutls-dev:armhf (7.65.3-1) ...
Setting up python-attr (18.2.0-1) ...
Setting up man-db (2.8.7-3) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libnetcdf-c++4 (4.2-11) ...
Setting up gcc (4:9.2.1-3+rpi1) ...
Setting up libfreetype6-dev:armhf (2.9.1-4) ...
Setting up libxxf86vm1:armhf (1:1.1.4-1+b2) ...
Setting up libinput-bin (1.14.0-1) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libpython-dev:armhf (2.7.16-1) ...
Setting up python-six (1.12.0-2) ...
Setting up libnl-route-3-dev:armhf (3.4.0-1) ...
Setting up libltdl-dev:armhf (2.4.6-9) ...
Setting up python-zope.interface (4.3.2-1+b2) ...
Setting up libegl-mesa0:armhf (19.1.4-1) ...
Setting up libxcb-dri2-0-dev:armhf (1.13.1-2) ...
Setting up libhdf5-openmpi-103:armhf (1.10.4+repack-10) ...
Setting up python-configparser (3.5.0b2-3) ...
Setting up python-wsaccel (0.6.2-1+b1) ...
Setting up python-pyasn1 (0.4.2-3) ...
Setting up libxfixes3:armhf (1:5.0.3-1) ...
Setting up python-nacl (1.3.0-2) ...
Setting up libgdk-pixbuf2.0-0:armhf (2.38.1+dfsg-1) ...
Setting up python-pyasn1-modules (0.2.1-0.2) ...
Setting up libhdf5-dev (1.10.4+repack-10) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5-serial.pc to provide /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5.pc (hdf5.pc) in auto mode
Setting up python-concurrent.futures (3.3.0-1) ...
Setting up liblapack-dev:armhf (3.8.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode
Setting up libdrm-freedreno1:armhf (2.4.99-1+rpi1) ...
Setting up libnetcdf-dev (1:4.6.2-1+b1) ...
Setting up libxcb-render0-dev:armhf (1.13.1-2) ...
Setting up libxcb-glx0-dev:armhf (1.13.1-2) ...
Setting up g++-9 (9.2.1-4+rpi1) ...
Setting up libxt6:armhf (1:1.1.5-1) ...
Setting up libdrm-tegra0:armhf (2.4.99-1+rpi1) ...
Setting up libxcb-shape0-dev:armhf (1.13.1-2) ...
Setting up libxext-dev:armhf (2:1.3.3-1+b2) ...
Setting up libcups2:armhf (2.2.12-2+rpi1) ...
Setting up g++ (4:9.2.1-3+rpi1) ...
Setting up libvdpau1:armhf (1.2-1) ...
Setting up libdapclient6v5:armhf (3.20.4-1) ...
Setting up libegl1:armhf (1.1.0-1) ...
Setting up cmake (3.13.4-1) ...
Setting up libxcb-sync-dev:armhf (1.13.1-2) ...
Setting up python-twisted-bin:armhf (18.9.0-3) ...
Setting up libhwloc-dev:armhf (1.11.13-1+rpi1) ...
Setting up libxcb-xfixes0-dev:armhf (1.13.1-2) ...
Setting up libxss1:armhf (1:1.2.3-1) ...
Setting up libfontconfig1:armhf (2.13.1-2) ...
Setting up libarmadillo9 (1:9.600.5+dfsg-1) ...
Setting up python-u-msgpack (2.1-1) ...
Setting up python-snappy (0.5.3-1+b1) ...
Setting up python-future (0.16.0-1) ...
update-alternatives: using /usr/bin/python2-futurize to provide /usr/bin/futurize (futurize) in auto mode
update-alternatives: using /usr/bin/python2-pasteurize to provide /usr/bin/pasteurize (pasteurize) in auto mode
Setting up libbluray2:armhf (1:1.1.2-2) ...
Setting up libsuperlu-dev:armhf (5.2.1+dfsg1-4) ...
Setting up python-ubjson (0.14.0-1) ...
Setting up libva-x11-2:armhf (2.5.0-1) ...
Setting up libxrender-dev:armhf (1:0.9.10-1) ...
Setting up libdap-dev:armhf (3.20.4-1) ...
Setting up openmpi-bin (3.1.3-11+rpi1) ...
update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode
update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode
Setting up libgnutls28-dev:armhf (3.6.9-4) ...
Setting up libinput10:armhf (1.14.0-1) ...
Setting up libx11-xcb-dev:armhf (2:1.6.7-1) ...
Setting up python-trollius (2.1~b1-5) ...
Setting up fontconfig (2.13.1-2) ...
Regenerating fonts cache... done.
Setting up libdrm-dev:armhf (2.4.99-1+rpi1) ...
Setting up libxft2:armhf (2.3.2-2) ...
Setting up libarpack2-dev:armhf (3.7.0-2) ...
Setting up libfontconfig1-dev:armhf (2.13.1-2) ...
Setting up libxdamage1:armhf (1:1.1.5-1) ...
Setting up libxerces-c3.2:armhf (3.2.2+debian-1+b1) ...
Setting up libxi6:armhf (2:1.7.9-1) ...
Setting up gfortran-9 (9.2.1-4+rpi1) ...
Setting up po-debconf (1.0.21) ...
Setting up python-automat (0.6.0-1) ...
Setting up libxxf86vm-dev:armhf (1:1.1.4-1+b2) ...
Setting up libpango-1.0-0:armhf (1.42.4-7) ...
Setting up libqt5gui5:armhf (5.11.3+dfsg1-4+rpi1) ...
Setting up python-cryptography (2.6.1-3) ...
Setting up mpi-default-bin (1.13) ...
Setting up libpoppler82:armhf (0.71.0-5) ...
Setting up libqt5widgets5:armhf (5.11.3+dfsg1-4+rpi1) ...
Setting up libnetcdf-cxx-legacy-dev (4.2-11) ...
Setting up libibverbs-dev:armhf (24.0-2) ...
Setting up libxss-dev:armhf (1:1.2.3-1) ...
Setting up gfortran (4:9.2.1-3+rpi1) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up libcairo2:armhf (1.16.0-4) ...
Setting up libavutil56:armhf (7:4.1.4-1+b3) ...
Setting up libarmadillo-dev (1:9.600.5+dfsg-1) ...
Setting up libxfixes-dev:armhf (1:5.0.3-1) ...
Setting up libqt5printsupport5:armhf (5.11.3+dfsg1-4+rpi1) ...
Setting up libxcb-randr0-dev:armhf (1.13.1-2) ...
Setting up libxt-dev:armhf (1:1.1.5-1) ...
Setting up libxerces-c-dev (3.2.2+debian-1+b1) ...
Setting up libxcb-present-dev:armhf (1.13.1-2) ...
Setting up libhdf4-alt-dev (4.2.14-1) ...
Setting up python-mpi4py (3.0.2-13) ...
Setting up python-lz4 (2.1.10+dfsg-1) ...
Setting up libmariadb-dev (1:10.3.17-1) ...
Setting up libqt5opengl5:armhf (5.11.3+dfsg1-4+rpi1) ...
Setting up libtheora0:armhf (1.1.1+dfsg.1-15) ...
Setting up mesa-common-dev:armhf (19.1.4-1) ...
Setting up libswscale5:armhf (7:4.1.4-1+b3) ...
Setting up libopenmpi-dev:armhf (3.1.3-11+rpi1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/openmpi/include to provide /usr/include/arm-linux-gnueabihf/mpi (mpi-arm-linux-gnueabihf) in auto mode
Setting up libpangoft2-1.0-0:armhf (1.42.4-7) ...
Setting up libhdf5-openmpi-dev (1.10.4+repack-10) ...
update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode
Setting up libqt5quick5:armhf (5.11.3-4) ...
Setting up python-openssl (19.0.0-1) ...
Setting up python-service-identity (18.1.0-5) ...
Setting up libpangocairo-1.0-0:armhf (1.42.4-7) ...
Setting up libxft-dev:armhf (2.3.2-2) ...
Setting up libxdamage-dev:armhf (1:1.1.5-1) ...
Setting up libpoppler-dev:armhf (0.71.0-5) ...
Setting up libavutil-dev:armhf (7:4.1.4-1+b3) ...
Setting up libmariadb-dev-compat:armhf (1:10.3.17-1) ...
Setting up libglx-mesa0:armhf (19.1.4-1) ...
Setting up libglx0:armhf (1.1.0-1) ...
Setting up libpoppler-private-dev:armhf (0.71.0-5) ...
Setting up libqt5webkit5:armhf (5.212.0~alpha2-21+rpi1) ...
Setting up libswresample3:armhf (7:4.1.4-1+b3) ...
Setting up librsvg2-2:armhf (2.44.14-1) ...
Setting up libgl1:armhf (1.1.0-1) ...
Setting up libtheora-dev:armhf (1.1.1+dfsg.1-15) ...
Setting up libswscale-dev:armhf (7:4.1.4-1+b3) ...
Setting up mpi-default-dev (1.13) ...
Setting up python-twisted-core (18.9.0-3) ...
Setting up libavcodec58:armhf (7:4.1.4-1+b3) ...
Setting up libglu1-mesa:armhf (9.0.0-2.1) ...
Setting up libchromaprint1:armhf (1.4.3-3) ...
Setting up default-libmysqlclient-dev:armhf (1.0.5) ...
Setting up python-twisted (18.9.0-3) ...
Setting up libswresample-dev:armhf (7:4.1.4-1+b3) ...
Setting up libavformat58:armhf (7:4.1.4-1+b3) ...
Setting up libavcodec-dev:armhf (7:4.1.4-1+b3) ...
Setting up libglvnd-dev:armhf (1.1.0-1) ...
Setting up libavformat-dev:armhf (7:4.1.4-1+b3) ...
Setting up python-txaio (2.10.0-1) ...
Setting up libgl2ps1.4 (1.4.0+dfsg1-2) ...
Setting up python-autobahn (17.10.1+dfsg1-5) ...
Setting up libhdf5-mpi-dev (1.10.4+repack-10) ...
Setting up libgl1-mesa-dev:armhf (19.1.4-1) ...
Setting up libgl2ps-dev (1.4.0+dfsg1-2) ...
Setting up libglu1-mesa-dev:armhf (9.0.0-2.1) ...
Setting up odbcinst (2.3.6-0.1+b1) ...
Setting up dh-autoreconf (19) ...
Setting up dh-strip-nondeterminism (1.5.0-1) ...
Setting up odbcinst1debian2:armhf (2.3.6-0.1+b1) ...
Setting up libgdal20 (2.4.2+dfsg-1+b2) ...
Setting up unixodbc-dev:armhf (2.3.6-0.1+b1) ...
Setting up libvtk6.3 (6.3.0+dfsg2-3) ...
Setting up debhelper (12.5.4) ...
Setting up libvtk6.3-qt (6.3.0+dfsg2-3) ...
Setting up libgdal-dev (2.4.2+dfsg-1+b2) ...
Setting up python-vtk6 (6.3.0+dfsg2-3) ...
Setting up libvtk6-dev (6.3.0+dfsg2-3) ...
Setting up sbuild-build-depends-lammps-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.28-10+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.9.0-0.bpo.6-armmp armhf (armv7l)
Toolchain package versions: binutils_2.32.51.20190821-2+rpi1 dpkg-dev_1.19.7 g++-8_8.3.0-6+rpi1 g++-9_9.2.1-4+rpi1 gcc-8_8.3.0-6+rpi1 gcc-9_9.2.1-4+rpi1 libc6-dev_2.28-10+rpi1 libstdc++-8-dev_8.3.0-6+rpi1 libstdc++-9-dev_9.2.1-4+rpi1 libstdc++6_9.2.1-4+rpi1 linux-libc-dev_4.18.20-2+rpi1
Package versions: adduser_3.118 apt_1.8.2 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.3+rpi1 base-passwd_3.5.46 bash_5.0-4 binutils_2.32.51.20190821-2+rpi1 binutils-arm-linux-gnueabihf_2.32.51.20190821-2+rpi1 binutils-common_2.32.51.20190821-2+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.33.1-0.1 build-essential_12.6 bzip2_1.0.6-9.1 cmake_3.13.4-1 cmake-data_3.13.4-1 coreutils_8.30-3 cpp_4:9.2.1-3+rpi1 cpp-8_8.3.0-6+rpi1 cpp-9_9.2.1-4+rpi1 cython_0.29.2-2 dash_0.5.10.2-5 debconf_1.5.71 debhelper_12.5.4 debianutils_4.8.6.1 default-libmysqlclient-dev_1.0.5 dh-autoreconf_19 dh-strip-nondeterminism_1.5.0-1 diffutils_1:3.7-3 dirmngr_2.2.12-1+rpi1 dpkg_1.19.7 dpkg-dev_1.19.7 dwz_0.13-1 e2fsprogs_1.44.5-1 fakeroot_1.23-1 fdisk_2.33.1-0.1 file_1:5.37-5 findutils_4.6.0+git+20190209-2 fontconfig_2.13.1-2 fontconfig-config_2.13.1-2 fonts-dejavu-core_2.37-1 g++_4:9.2.1-3+rpi1 g++-8_8.3.0-6+rpi1 g++-9_9.2.1-4+rpi1 gcc_4:9.2.1-3+rpi1 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libss2_1.44.5-1 libssh-gcrypt-4_0.9.0-1 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1c-1 libstdc++-8-dev_8.3.0-6+rpi1 libstdc++-9-dev_9.2.1-4+rpi1 libstdc++6_9.2.1-4+rpi1 libsub-override-perl_0.09-2 libsuperlu-dev_5.2.1+dfsg1-4 libsuperlu5_5.2.1+dfsg1-4 libswresample-dev_7:4.1.4-1+b3 libswresample3_7:4.1.4-1+b3 libswscale-dev_7:4.1.4-1+b3 libswscale5_7:4.1.4-1+b3 libsymspg-dev_1.13.0-1 libsymspg1_1.13.0-1 libsystemd0_241-5+rpi1 libsz2_1.0.4-1 libtasn1-6_4.14-2 libtasn1-6-dev_4.14-2 libtext-charwidth-perl_0.04-7.1+b1 libtext-iconv-perl_1.7-5+b10 libtext-wrapi18n-perl_0.06-7.1 libthai-data_0.1.28-3 libthai0_0.1.28-3 libtheora-dev_1.1.1+dfsg.1-15 libtheora0_1.1.1+dfsg.1-15 libtiff-dev_4.0.10+git190818-1 libtiff5_4.0.10+git190818-1 libtiffxx5_4.0.10+git190818-1 libtinfo5_6.1+20190803-1 libtinfo6_6.1+20190803-1 libtool_2.4.6-9 libtwolame0_0.3.13-4 libubsan1_9.2.1-4+rpi1 libuchardet0_0.0.6-3 libudev1_241-5+rpi1 libunbound8_1.9.3-1 libunistring2_0.9.10-1 liburiparser-dev_0.9.3-2 liburiparser1_0.9.3-2 libuuid1_2.34-0.1 libuv1_1.30.1-1 libva-drm2_2.5.0-1 libva-x11-2_2.5.0-1 libva2_2.5.0-1 libvdpau1_1.2-1 libvorbis0a_1.3.6-2 libvorbisenc2_1.3.6-2 libvorbisfile3_1.3.6-2 libvoro++1_0.4.6+dfsg1-3 libvpx6_1.8.1-2 libvtk6-dev_6.3.0+dfsg2-3 libvtk6.3_6.3.0+dfsg2-3 libvtk6.3-qt_6.3.0+dfsg2-3 libwacom-common_0.32-1 libwacom2_0.32-1 libwavpack1_5.1.0-7 libwayland-client0_1.17.0-1 libwayland-server0_1.17.0-1 libwebp-dev_0.6.1-2 libwebp6_0.6.1-2 libwebpdemux2_0.6.1-2 libwebpmux3_0.6.1-2 libwoff1_1.0.2-1 libx11-6_2:1.6.7-1 libx11-data_2:1.6.7-1 libx11-dev_2:1.6.7-1 libx11-xcb-dev_2:1.6.7-1 libx11-xcb1_2:1.6.7-1 libx264-155_2:0.155.2917+git0a84d98-2+rpi1 libx265-176_3.1.1-2 libxau-dev_1:1.0.8-1+b2 libxau6_1:1.0.8-1+b2 libxcb-dri2-0_1.13.1-2 libxcb-dri2-0-dev_1.13.1-2 libxcb-dri3-0_1.13.1-2 libxcb-dri3-dev_1.13.1-2 libxcb-glx0_1.13.1-2 libxcb-glx0-dev_1.13.1-2 libxcb-icccm4_0.4.1-1.1 libxcb-image0_0.4.0-1+b2 libxcb-keysyms1_0.4.0-1+b2 libxcb-present-dev_1.13.1-2 libxcb-present0_1.13.1-2 libxcb-randr0_1.13.1-2 libxcb-randr0-dev_1.13.1-2 libxcb-render-util0_0.3.9-1+b1 libxcb-render0_1.13.1-2 libxcb-render0-dev_1.13.1-2 libxcb-shape0_1.13.1-2 libxcb-shape0-dev_1.13.1-2 libxcb-shm0_1.13.1-2 libxcb-sync-dev_1.13.1-2 libxcb-sync1_1.13.1-2 libxcb-util0_0.3.8-3 libxcb-xfixes0_1.13.1-2 libxcb-xfixes0-dev_1.13.1-2 libxcb-xinerama0_1.13.1-2 libxcb-xkb1_1.13.1-2 libxcb1_1.13.1-2 libxcb1-dev_1.13.1-2 libxdamage-dev_1:1.1.5-1 libxdamage1_1:1.1.5-1 libxdmcp-dev_1:1.1.2-3 libxdmcp6_1:1.1.2-3 libxerces-c-dev_3.2.2+debian-1+b1 libxerces-c3.2_3.2.2+debian-1+b1 libxext-dev_2:1.3.3-1+b2 libxext6_2:1.3.3-1+b2 libxfixes-dev_1:5.0.3-1 libxfixes3_1:5.0.3-1 libxft-dev_2.3.2-2 libxft2_2.3.2-2 libxi6_2:1.7.9-1 libxkbcommon-x11-0_0.8.2-1 libxkbcommon0_0.8.2-1 libxml2_2.9.4+dfsg1-7+b2 libxml2-dev_2.9.4+dfsg1-7+b2 libxrender-dev_1:0.9.10-1 libxrender1_1:0.9.10-1 libxshmfence-dev_1.3-1 libxshmfence1_1.3-1 libxslt1.1_1.1.32-2.1 libxss-dev_1:1.2.3-1 libxss1_1:1.2.3-1 libxt-dev_1:1.1.5-1 libxt6_1:1.1.5-1 libxvidcore4_2:1.3.5-1 libxxf86vm-dev_1:1.1.4-1+b2 libxxf86vm1_1:1.1.4-1+b2 libzstd-dev_1.4.3+dfsg-1+rpi1 libzstd1_1.4.3+dfsg-1+rpi1 libzvbi-common_0.2.35-16 libzvbi0_0.2.35-16 linux-libc-dev_4.18.20-2+rpi1 login_1:4.5-1.1 lsb-base_10.2019051400+rpi1 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.7-3 mariadb-common_1:10.3.17-1 mawk_1.3.3-17 mesa-common-dev_19.1.4-1 mime-support_3.63 mount_2.33.1-0.1 mpi-default-bin_1.13 mpi-default-dev_1.13 multiarch-support_2.28-10+rpi1 mysql-common_5.8+1.0.5 ncurses-base_6.1+20181013-2 ncurses-bin_6.1+20181013-2 netbase_5.6 nettle-dev_3.4.1-1 ocl-icd-libopencl1_2.2.12-2 ocl-icd-opencl-dev_2.2.12-2 odbcinst_2.3.6-0.1+b1 odbcinst1debian2_2.3.6-0.1+b1 opencl-c-headers_2.2~2019.01.17-g49f07d3-1 openmpi-bin_3.1.3-11+rpi1 openmpi-common_3.1.3-11+rpi1 openssh-client_1:8.0p1-6 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-6 perl-base_5.28.1-6 perl-modules-5.28_5.28.1-6 pinentry-curses_1.1.0-2 pkg-config_0.29-6 po-debconf_1.0.21 procps_2:3.3.15-2 proj-data_6.2.0-1 python_2.7.16-1 python-asn1crypto_0.24.0-1 python-attr_18.2.0-1 python-autobahn_17.10.1+dfsg1-5 python-automat_0.6.0-1 python-cbor_1.0.0-1+b1 python-cffi-backend_1.12.3-1 python-concurrent.futures_3.3.0-1 python-configparser_3.5.0b2-3 python-constantly_15.1.0-1 python-cryptography_2.6.1-3 python-enum34_1.1.6-2 python-future_0.16.0-1 python-hyperlink_17.3.1-2 python-incremental_16.10.1-3 python-ipaddress_1.0.17-1 python-lz4_2.1.10+dfsg-1 python-minimal_2.7.16-1 python-mpi4py_3.0.2-13 python-nacl_1.3.0-2 python-openssl_19.0.0-1 python-pkg-resources_41.1.0-1 python-pyasn1_0.4.2-3 python-pyasn1-modules_0.2.1-0.2 python-pyqrcode_1.2.1-2 python-service-identity_18.1.0-5 python-six_1.12.0-2 python-snappy_0.5.3-1+b1 python-trie_0.2+ds-1 python-trollius_2.1~b1-5 python-twisted_18.9.0-3 python-twisted-bin_18.9.0-3 python-twisted-core_18.9.0-3 python-txaio_2.10.0-1 python-u-msgpack_2.1-1 python-ubjson_0.14.0-1 python-vtk6_6.3.0+dfsg2-3 python-wsaccel_0.6.2-1+b1 python-zope.interface_4.3.2-1+b2 python2_2.7.16-1 python2-minimal_2.7.16-1 python2.7_2.7.16-3 python2.7-minimal_2.7.16-3 raspbian-archive-keyring_20120528.2 readline-common_7.0-5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-lammps-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 shared-mime-info_1.10-1 sysvinit-utils_2.93-8 tar_1.30+dfsg-6 tzdata_2019a-1 ucf_3.0038+nmu1 unixodbc-dev_2.3.6-0.1+b1 util-linux_2.33.1-0.1 uuid-dev_2.34-0.1 voro++-dev_0.4.6+dfsg1-3 x11-common_1:7.7+19 x11proto-core-dev_2018.4-4 x11proto-damage-dev_1:2018.4-4 x11proto-dev_2018.4-4 x11proto-fixes-dev_1:2018.4-4 x11proto-scrnsaver-dev_2018.4-4 x11proto-xext-dev_2018.4-4 x11proto-xf86vidmode-dev_2018.4-4 xkb-data_2.26-2 xorg-sgml-doctools_1:1.11-1 xtrans-dev_1.3.5-1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1 zlib1g-dev_1:1.2.11.dfsg-1

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Fri Mar  8 06:59:52 2019 UTC
gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv:                issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./lammps_0~20181211.gitad1b1897d+dfsg1-2.dsc
dpkg-source: info: extracting lammps in /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1
dpkg-source: info: unpacking lammps_0~20181211.gitad1b1897d+dfsg1.orig.tar.xz
dpkg-source: info: unpacking lammps_0~20181211.gitad1b1897d+dfsg1-2.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying 10_enable_spglib.patch
dpkg-source: info: applying 20_set_potentials_path.patch

Check disc space
----------------

Sufficient free space for build

Hack binNMU version
-------------------

Created changelog entry for binNMU version 0~20181211.gitad1b1897d+dfsg1-2+b1

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-2842f677-552a-4fd3-83a0-69ab2123955d
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd

dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package lammps
dpkg-buildpackage: info: source version 0~20181211.gitad1b1897d+dfsg1-2+b1
dpkg-buildpackage: info: source distribution bullseye-staging
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 fakeroot debian/rules clean
dh clean --sourcedirectory=cmake --builddirectory=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1'
dh_auto_clean
rm -rf /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build
make[1]: Leaving directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1'
   dh_autoreconf_clean -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-0\~20181211.gitad1b1897d\+dfsg1/debian/build
   dh_clean -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-0\~20181211.gitad1b1897d\+dfsg1/debian/build
 debian/rules build-arch
dh build-arch --sourcedirectory=cmake --builddirectory=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build
   dh_update_autotools_config -a -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-0\~20181211.gitad1b1897d\+dfsg1/debian/build
   dh_autoreconf -a -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-0\~20181211.gitad1b1897d\+dfsg1/debian/build
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1'
dh_auto_configure -- \
	-DPKG_ASPHERE=ON \
	-DPKG_BODY=ON \
	-DPKG_CLASS2=ON \
	-DPKG_COLLOID=ON \
	-DPKG_COMPRESS=ON \
	-DPKG_CORESHELL=ON \
	-DPKG_DIPOLE=ON \
	-DPKG_GPU=ON \
	-DPKG_GRANULAR=ON \
	-DPKG_KIM=OFF \
	-DPKG_KSPACE=ON \
	-DPKG_MANYBODY=ON \
	-DPKG_MC=ON \
	-DPKG_MEAM=ON \
	-DPKG_MISC=ON \
	-DPKG_MOLECULE=ON \
	-DPKG_MPIIO=ON \
	-DPKG_OPT=ON \
	-DPKG_PERI=ON \
	-DPKG_POEMS=ON \
	-DPKG_PYTHON=ON \
	-DPKG_QEQ=ON \
	-DPKG_REAX=OFF \
	-DPKG_REPLICA=ON \
	-DPKG_RIGID=ON \
	-DPKG_SHOCK=ON \
	-DPKG_SNAP=ON \
	-DPKG_SRD=ON \
	-DPKG_USER-ATC=ON \
	-DPKG_USER-AWPMD=ON \
	-DPKG_USER-BOCS=ON \
	-DPKG_USER-CGDNA=ON \
	-DPKG_USER-CGSDK=ON \
	-DPKG_USER-DIFFRACTION=ON \
	-DPKG_USER-DPD=ON \
	-DPKG_USER-DRUDE=ON \
	-DPKG_USER-EFF=ON \
	-DPKG_USER-FEP=ON \
	-DPKG_USER-H5MD=ON \
	-DPKG_USER-LB=ON \
	-DPKG_USER-MANIFOLD=ON \
	-DPKG_USER-MEAMC=ON \
	-DPKG_USER-MESO=ON \
	-DPKG_USER-MGPT=ON \
	-DPKG_USER-MISC=ON \
	-DPKG_USER-MOFFF=ON \
	-DPKG_USER-MOLFILE=ON \
	-DPKG_USER-NETCDF=ON \
	-DPKG_USER-OMP=ON \
	-DPKG_USER-PHONON=ON \
	-DPKG_USER-QTB=ON \
	-DPKG_USER-REAXC=OFF \
	-DPKG_USER-SMD=ON \
	-DPKG_USER-SMTBQ=ON \
	-DPKG_USER-SPH=ON \
	-DPKG_USER-TALLY=ON \
	-DPKG_USER-UEF=ON \
	-DPKG_USER-VTK=ON \
	-DPKG_VORONOI=ON
	cd debian/build && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf -DPKG_ASPHERE=ON -DPKG_BODY=ON -DPKG_CLASS2=ON -DPKG_COLLOID=ON -DPKG_COMPRESS=ON -DPKG_CORESHELL=ON -DPKG_DIPOLE=ON -DPKG_GPU=ON -DPKG_GRANULAR=ON -DPKG_KIM=OFF -DPKG_KSPACE=ON -DPKG_MANYBODY=ON -DPKG_MC=ON -DPKG_MEAM=ON -DPKG_MISC=ON -DPKG_MOLECULE=ON -DPKG_MPIIO=ON -DPKG_OPT=ON -DPKG_PERI=ON -DPKG_POEMS=ON -DPKG_PYTHON=ON -DPKG_QEQ=ON -DPKG_REAX=OFF -DPKG_REPLICA=ON -DPKG_RIGID=ON -DPKG_SHOCK=ON -DPKG_SNAP=ON -DPKG_SRD=ON -DPKG_USER-ATC=ON -DPKG_USER-AWPMD=ON -DPKG_USER-BOCS=ON -DPKG_USER-CGDNA=ON -DPKG_USER-CGSDK=ON -DPKG_USER-DIFFRACTION=ON -DPKG_USER-DPD=ON -DPKG_USER-DRUDE=ON -DPKG_USER-EFF=ON -DPKG_USER-FEP=ON -DPKG_USER-H5MD=ON -DPKG_USER-LB=ON -DPKG_USER-MANIFOLD=ON -DPKG_USER-MEAMC=ON -DPKG_USER-MESO=ON -DPKG_USER-MGPT=ON -DPKG_USER-MISC=ON -DPKG_USER-MOFFF=ON -DPKG_USER-MOLFILE=ON -DPKG_USER-NETCDF=ON -DPKG_USER-OMP=ON -DPKG_USER-PHONON=ON -DPKG_USER-QTB=ON -DPKG_USER-REAXC=OFF -DPKG_USER-SMD=ON -DPKG_USER-SMTBQ=ON -DPKG_USER-SPH=ON -DPKG_USER-TALLY=ON -DPKG_USER-UEF=ON -DPKG_USER-VTK=ON -DPKG_VORONOI=ON ../../cmake
-- The CXX compiler identification is GNU 9.2.1
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Running check for auto-generated files from make-based build system
-- The Fortran compiler identification is GNU 9.2.1
-- Check for working Fortran compiler: /usr/bin/gfortran
-- Check for working Fortran compiler: /usr/bin/gfortran  -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /usr/bin/gfortran supports Fortran 90
-- Checking whether /usr/bin/gfortran supports Fortran 90 -- yes
-- The C compiler identification is GNU 9.2.1
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Found MPI_C: /usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi.so (found version "3.1") 
-- Found MPI_CXX: /usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi_cxx.so (found version "3.1") 
-- Found MPI_Fortran: /usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi_usempif08.so (found version "3.1") 
-- Found MPI: TRUE (found version "3.1")  
-- Found OpenMP_C: -fopenmp (found version "4.5") 
-- Found OpenMP_CXX: -fopenmp (found version "4.5") 
-- Found OpenMP_Fortran: -fopenmp (found version "4.5") 
-- Found OpenMP: TRUE (found version "4.5")  
-- Found PkgConfig: /usr/bin/pkg-config (found version "0.29") 
-- Checking for module 'fftw3'
--   Found fftw3, version 3.3.8
-- Found FFTW3: /usr/lib/arm-linux-gnueabihf/libfftw3.so  
-- Looking for Fortran sgemm
-- Looking for Fortran sgemm - not found
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - found
-- Found Threads: TRUE  
-- Looking for Fortran sgemm
-- Looking for Fortran sgemm - found
-- Found BLAS: /usr/lib/arm-linux-gnueabihf/libblas.so  
-- Looking for Fortran cheev
-- Looking for Fortran cheev - found
-- A library with LAPACK API found.
-- Found PythonInterp: /usr/bin/python (found version "2.7.16") 
-- Found PythonLibs: /usr/lib/arm-linux-gnueabihf/libpython2.7.so (found version "2.7.16+") 
-- Found JPEG: /usr/lib/arm-linux-gnueabihf/libjpeg.so (found version "62") 
-- Found PNG: /usr/lib/arm-linux-gnueabihf/libpng.so (found version "1.6.37") 
-- Found ZLIB: /usr/lib/arm-linux-gnueabihf/libz.so (found version "1.2.11") 
-- Found GZIP: /bin/gzip  
-- Could NOT find FFMPEG (missing: FFMPEG_EXECUTABLE) 
-- Found VORO: /usr/lib/arm-linux-gnueabihf/libvoro++.so  
-- Found NetCDF: /usr/lib/arm-linux-gnueabihf/libnetcdf.so  
-- The imported target "vtkHashSource" references the file
   "/usr/bin/vtkHashSource-6.3"
but this file does not exist.  Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
   "/usr/lib/cmake/vtk-6.3/VTKTargets.cmake"
but not all the files it references.

-- The imported target "vtkWrappingTools" references the file
   "/usr/lib/libvtkWrappingTools-6.3.a"
but this file does not exist.  Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
   "/usr/lib/cmake/vtk-6.3/VTKTargets.cmake"
but not all the files it references.

-- The imported target "vtkWrapHierarchy" references the file
   "/usr/bin/vtkWrapHierarchy-6.3"
but this file does not exist.  Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
   "/usr/lib/cmake/vtk-6.3/VTKTargets.cmake"
but not all the files it references.

-- The imported target "vtkWrapTcl" references the file
   "/usr/bin/vtkWrapTcl-6.3"
but this file does not exist.  Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
   "/usr/lib/cmake/vtk-6.3/VTKTargets.cmake"
but not all the files it references.

-- The imported target "vtkWrapTclInit" references the file
   "/usr/bin/vtkWrapTclInit-6.3"
but this file does not exist.  Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
   "/usr/lib/cmake/vtk-6.3/VTKTargets.cmake"
but not all the files it references.

-- The imported target "vtkParseJava" references the file
   "/usr/bin/vtkParseJava-6.3"
but this file does not exist.  Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
   "/usr/lib/cmake/vtk-6.3/VTKTargets.cmake"
but not all the files it references.

-- The imported target "vtkWrapJava" references the file
   "/usr/bin/vtkWrapJava-6.3"
but this file does not exist.  Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
   "/usr/lib/cmake/vtk-6.3/VTKTargets.cmake"
but not all the files it references.

-- The imported target "vtkParseOGLExt" references the file
   "/usr/bin/vtkParseOGLExt-6.3"
but this file does not exist.  Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
   "/usr/lib/cmake/vtk-6.3/VTKTargets.cmake"
but not all the files it references.

-- The imported target "vtkEncodeString" references the file
   "/usr/bin/vtkEncodeString-6.3"
but this file does not exist.  Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
   "/usr/lib/cmake/vtk-6.3/VTKTargets.cmake"
but not all the files it references.

-- Looking for C++ include math.h
-- Looking for C++ include math.h - found
-- HDF5: Using hdf5 compiler wrapper to determine C configuration
-- Found HDF5: /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so;/usr/lib/arm-linux-gnueabihf/libpthread.so;/usr/lib/arm-linux-gnueabihf/libsz.so;/usr/lib/arm-linux-gnueabihf/libz.so;/usr/lib/arm-linux-gnueabihf/libdl.so;/usr/lib/arm-linux-gnueabihf/libm.so (found version "1.10.4")  
-- Looking for CL_VERSION_2_2
-- Looking for CL_VERSION_2_2 - found
-- Found OpenCL: /usr/lib/arm-linux-gnueabihf/libOpenCL.so (found version "2.2") 
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/atom_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/beck_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/born_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/born_coul_long_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/born_coul_long_cs_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/born_coul_wolf_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/born_coul_wolf_cs_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/buck_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/buck_coul_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/buck_coul_long_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/charmm_long_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/colloid_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/coul_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/coul_debye_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/coul_dsf_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/coul_long_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/coul_long_cs_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/device_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/dipole_lj_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/dipole_lj_sf_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/dipole_long_lj_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/dpd_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/eam_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/ellipsoid_nbor_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/gauss_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/lj_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/lj96_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/lj_class2_long_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/lj_coul_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/lj_coul_debye_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/lj_coul_long_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/lj_coul_msm_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/lj_cubic_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/lj_dsf_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/lj_expand_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/lj_expand_coul_long_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/lj_gromacs_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/lj_sdk_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/lj_sdk_long_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/mie_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/morse_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/neighbor_cpu_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/neighbor_gpu_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/pppm_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/re_squared_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/re_squared_lj_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/soft_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/sw_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/table_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/tersoff_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/tersoff_mod_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/tersoff_zbl_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/ufm_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/vashishta_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/yukawa_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/yukawa_colloid_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/zbl_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/gayberne_cl.h...
Creating /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu/gayberne_lj_cl.h...
-- Generating style_angle.h...
-- Generating style_atom.h...
-- Generating style_body.h...
-- Generating style_bond.h...
-- Generating style_command.h...
-- Generating style_compute.h...
-- Generating style_dihedral.h...
-- Generating style_dump.h...
-- Generating style_fix.h...
-- Generating style_improper.h...
-- Generating style_integrate.h...
-- Generating style_kspace.h...
-- Generating style_minimize.h...
-- Generating style_nbin.h...
-- Generating style_npair.h...
-- Generating style_nstencil.h...
-- Generating style_ntopo.h...
-- Generating style_pair.h...
-- Generating style_reader.h...
-- Generating style_region.h...
-- Generating lmpinstalledpkgs.h...
-- Building package: ASPHERE
-- Building package: BODY
-- Building package: CLASS2
-- Building package: COLLOID
-- Building package: COMPRESS
-- Building package: DIPOLE
-- Building package: GRANULAR
-- Building package: KSPACE
-- Building package: MANYBODY
-- Building package: MC
-- Building package: MEAM
-- Building package: MISC
-- Building package: MOLECULE
-- Building package: PERI
-- Building package: REPLICA
-- Building package: RIGID
-- Building package: SHOCK
-- Building package: SNAP
-- Building package: SRD
-- Building package: PYTHON
-- Building package: MPIIO
-- Building package: VORONOI
-- Building package: POEMS
-- Building package: USER-ATC
-- Building package: USER-AWPMD
-- Building package: USER-BOCS
-- Building package: USER-CGDNA
-- Building package: USER-MESO
-- Building package: USER-CGSDK
-- Building package: USER-DIFFRACTION
-- Building package: USER-DPD
-- Building package: USER-DRUDE
-- Building package: USER-EFF
-- Building package: USER-FEP
-- Building package: USER-H5MD
-- Building package: USER-LB
-- Building package: USER-MANIFOLD
-- Building package: USER-MEAMC
-- Building package: USER-MGPT
-- Building package: USER-MISC
-- Building package: USER-MOFFF
-- Building package: USER-MOLFILE
-- Building package: USER-NETCDF
-- Building package: USER-PHONON
-- Building package: USER-QTB
-- Building package: USER-SMD
-- Building package: USER-SMTBQ
-- Building package: USER-SPH
-- Building package: USER-TALLY
-- Building package: USER-UEF
-- Building package: USER-VTK
-- Building package: USER-OMP
-- Building package: OPT
-- Building package: GPU
-- Building package: CORESHELL
-- Building package: QEQ
-- The following packages have been found:
 * MPI
 * OpenMP
 * PkgConfig
 * FFTW3
 * LAPACK
 * Threads
 * BLAS
 * PythonInterp
 * PythonLibs
 * JPEG
 * PNG
 * VORO
 * NetCDF
 * Eigen3
 * VTK
 * ZLIB
 * HDF5
 * OpenCL

-- <<< Build configuration >>>
   Build type       None
   Install path     /usr
   Compilers and Flags:
   C++ Compiler     /usr/bin/c++
       Type         GNU
       Version      9.2.1
   C++ Flags        -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp  
   Defines          LAMMPS_SMALLBIG;LAMMPS_MEMALIGN=64;FFT_FFTW;LMP_PYTHON;LAMMPS_JPEG;LAMMPS_PNG;LAMMPS_GZIP;LMP_HAS_NETCDF;NC_64BIT_DATA=0x0020;vtkFiltersFlowPaths_AUTOINIT=1(vtkFiltersParallelFlowPaths);vtkIOExodus_AUTOINIT=1(vtkIOParallelExodus);vtkIOGeometry_AUTOINIT=1(vtkIOMPIParallel);vtkIOImage_AUTOINIT=1(vtkIOMPIImage);vtkIOParallel_AUTOINIT=1(vtkIOMPIParallel);vtkIOSQL_AUTOINIT=2(vtkIOMySQL,vtkIOPostgreSQL);vtkRenderingContext2D_AUTOINIT=1(vtkRenderingContextOpenGL);vtkRenderingCore_AUTOINIT=3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL);vtkRenderingFreeType_AUTOINIT=2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib);vtkRenderingLIC_AUTOINIT=1(vtkRenderingParallelLIC);vtkRenderingVolume_AUTOINIT=1(vtkRenderingVolumeOpenGL);LAMMPS_VTK;LMP_MPIIO;LMP_USER_OMP
-- Fortran Compiler /usr/bin/gfortran
           Type     GNU
           Version  9.2.1
   Fortran Flags    -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong 
-- C Compiler /usr/bin/cc
     Type     GNU
     Version  9.2.1
     C Flags  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp  
-- Linker flags:
   Executable      -Wl,-z,relro 
-- Static libraries  
-- Link libraries: /usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi_cxx.so;/usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi.so;/usr/lib/arm-linux-gnueabihf/libfftw3.so;/usr/lib/arm-linux-gnueabihf/libpython2.7.so;/usr/lib/arm-linux-gnueabihf/libjpeg.so;/usr/lib/arm-linux-gnueabihf/libpng.so;/usr/lib/arm-linux-gnueabihf/libz.so;/usr/lib/arm-linux-gnueabihf/libvoro++.so;molfile;/usr/lib/arm-linux-gnueabihf/libnetcdf.so;vtkChartsCore;vtkCommonColor;vtkCommonDataModel;vtkCommonMath;vtkCommonCore;vtksys;vtkCommonMisc;vtkCommonSystem;vtkCommonTransforms;vtkInfovisCore;vtkFiltersExtraction;vtkCommonExecutionModel;vtkFiltersCore;vtkFiltersGeneral;vtkCommonComputationalGeometry;vtkFiltersStatistics;vtkImagingFourier;vtkImagingCore;vtkalglib;vtkRenderingContext2D;vtkRenderingCore;vtkFiltersGeometry;vtkFiltersSources;vtkRenderingFreeType;/usr/lib/arm-linux-gnueabihf/libfreetype.so;vtkftgl;vtkDICOMParser;vtkDomainsChemistry;vtkIOXML;vtkIOGeometry;vtkIOCore;vtkIOXMLParser;/usr/lib/arm-linux-gnueabihf/libexpat.so;vtkFiltersAMR;vtkParallelCore;vtkIOLegacy;vtkFiltersFlowPaths;vtkFiltersGeneric;vtkFiltersHybrid;vtkImagingSources;vtkFiltersHyperTree;vtkFiltersImaging;vtkImagingGeneral;vtkFiltersModeling;vtkFiltersParallel;vtkFiltersParallelFlowPaths;vtkParallelMPI;vtkFiltersParallelGeometry;vtkFiltersParallelImaging;vtkFiltersParallelMPI;vtkFiltersParallelStatistics;vtkFiltersProgrammable;vtkFiltersPython;vtkWrappingPythonCore;vtkWrappingTools;vtkFiltersReebGraph;vtkFiltersSMP;vtkFiltersSelection;vtkFiltersTexture;vtkFiltersVerdict;verdict;vtkGeovisCore;vtkInfovisLayout;vtkImagingHybrid;vtkIOImage;vtkmetaio;/usr/lib/arm-linux-gnueabihf/libtiff.so;vtkInfovisBoostGraphAlgorithms;vtkInteractionStyle;vtkInteractionWidgets;vtkRenderingAnnotation;vtkImagingColor;vtkRenderingVolume;vtkViewsCore;vtkproj4;vtkIOAMR;/usr/lib/arm-linux-gnueabihf/hdf5/openmpi/libhdf5.so;/usr/lib/arm-linux-gnueabihf/libsz.so;/usr/lib/arm-linux-gnueabihf/libdl.so;/usr/lib/arm-linux-gnueabihf/libm.so;vtkIOEnSight;vtkIOExodus;vtkexoIIc;/usr/lib/arm-linux-gnueabihf/libnetcdf_c++.so;vtkIOExport;vtkRenderingGL2PS;vtkRenderingContextOpenGL;vtkRenderingOpenGL;/usr/lib/arm-linux-gnueabihf/libgl2ps.so;vtkRenderingLabel;vtkIOFFMPEG;vtkIOMovie;/usr/lib/arm-linux-gnueabihf/libtheoraenc.so;/usr/lib/arm-linux-gnueabihf/libtheoradec.so;/usr/lib/arm-linux-gnueabihf/libogg.so;vtkIOGDAL;vtkIOGeoJSON;vtkIOImport;vtkIOInfovis;/usr/lib/arm-linux-gnueabihf/libxml2.so;vtkIOLSDyna;vtkIOMINC;vtkIOMPIImage;vtkIOMPIParallel;vtkIOParallel;vtkIONetCDF;/usr/lib/arm-linux-gnueabihf/libjsoncpp.so;vtkIOMySQL;vtkIOSQL;sqlite3;vtkIOODBC;vtkIOPLY;vtkIOParallelExodus;vtkIOParallelLSDyna;vtkIOParallelNetCDF;vtkIOParallelXML;vtkIOPostgreSQL;vtkIOVPIC;VPIC;vtkIOVideo;vtkIOXdmf2;vtkxdmf2;vtkImagingMath;vtkImagingMorphological;vtkImagingStatistics;vtkImagingStencil;vtkInteractionImage;vtkParallelMPI4Py;vtkPythonInterpreter;vtkRenderingExternal;vtkRenderingFreeTypeFontConfig;vtkRenderingImage;vtkRenderingLIC;vtkRenderingLOD;vtkRenderingMatplotlib;vtkRenderingParallel;vtkRenderingParallelLIC;vtkRenderingVolumeAMR;vtkRenderingVolumeOpenGL;vtkTestingGenericBridge;vtkTestingIOSQL;vtkTestingRendering;vtkViewsContext2D;vtkViewsGeovis;vtkViewsInfovis;m;meam;poems;atc;awpmd;h5md;gpu;gfortran;gcc_s;gcc;c
-- Using mpi with headers in /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi;/usr/lib/arm-linux-gnueabihf/openmpi/include and /usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi_cxx.so;/usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi.so
-- GPU Api: OPENCL
-- OCL Tune: GENERIC
-- GPU Precision: MIXED
-- Using FFTW3 as FFT
-- Configuring done
-- Generating done
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_EXPORT_NO_PACKAGE_REGISTRY


-- Build files have been written to: /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build
make[1]: Leaving directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1'
   dh_auto_build -a -O--sourcedirectory=cmake -O--builddirectory=/<<BUILDDIR>>/lammps-0\~20181211.gitad1b1897d\+dfsg1/debian/build
	cd debian/build && make -j4 "INSTALL=install --strip-program=true"
make[1]: Entering directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build'
/usr/bin/cmake -S"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/cmake" -B"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/CMakeFiles" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/CMakeFiles/progress.marks"
make -f CMakeFiles/Makefile2 all
make[2]: Entering directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build'
make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/depend
make -f CMakeFiles/awpmd.dir/build.make CMakeFiles/awpmd.dir/depend
make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/depend
make -f CMakeFiles/poems.dir/build.make CMakeFiles/poems.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build'
cd "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/cmake" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/cmake" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/CMakeFiles/awpmd.dir/DependInfo.cmake" --color=
make[3]: Entering directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build'
cd "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/cmake" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/cmake" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/CMakeFiles/poems.dir/DependInfo.cmake" --color=
make[3]: Entering directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build'
cd "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/cmake" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/cmake" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/CMakeFiles/atc.dir/DependInfo.cmake" --color=
make[3]: Entering directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build'
cd "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/cmake" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/cmake" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/CMakeFiles/gpu.dir/DependInfo.cmake" --color=
Scanning dependencies of target awpmd
make[3]: Leaving directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build'
make -f CMakeFiles/awpmd.dir/build.make CMakeFiles/awpmd.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build'
[  0%] Building CXX object CMakeFiles/awpmd.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/src/logexc.cpp.o
Scanning dependencies of target poems
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/awpmd.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/src/logexc.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/src/logexc.cpp"
make[3]: Leaving directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build'
make -f CMakeFiles/poems.dir/build.make CMakeFiles/poems.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build'
[  0%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/body.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/body.cpp"
[  0%] Building CXX object CMakeFiles/awpmd.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact/TCP/wpmd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/awpmd.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact/TCP/wpmd.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact/TCP/wpmd.cpp"
[  0%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/body23joint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/body23joint.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/body23joint.cpp"
Scanning dependencies of target atc
make[3]: Leaving directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build'
make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build'
[  0%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Coupling.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Coupling.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Coupling.cpp"
Scanning dependencies of target gpu
make[3]: Leaving directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build'
make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build'
[  0%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_answer.cpp.o
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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_answer.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_answer.cpp"
[  0%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/colmatmap.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/colmatmap.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/colmatmap.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_answer.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_answer.cpp:16:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  0%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/colmatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/colmatrix.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/colmatrix.cpp"
[  0%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.cpp"
[  0%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/eulerparameters.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/eulerparameters.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/eulerparameters.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.cpp:16:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  0%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/fastmatrixops.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/fastmatrixops.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/fastmatrixops.cpp"
[  0%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.cpp"
[  0%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/fixedpoint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" 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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/fixedpoint.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/fixedpoint.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.cpp:16:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  0%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/freebodyjoint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/freebodyjoint.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/freebodyjoint.cpp"
[  0%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/inertialframe.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/inertialframe.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/inertialframe.cpp"
[  1%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/joint.cpp.o
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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" 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[  1%] Building CXX object CMakeFiles/awpmd.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact/TCP/wpmd_split.cpp.o
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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I/usr/include/hdf5/serial 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[  1%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/mat3x3.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" 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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/mat3x3.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/mat3x3.cpp"
[  1%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" 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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.cpp"
[  1%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/mat4x4.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/mat4x4.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/mat4x4.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.cpp:17:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  1%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/mat6x6.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/mat6x6.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/mat6x6.cpp"
[  1%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/matrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" 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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/matrix.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/matrix.cpp"
[  1%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/matrixfun.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" 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[  1%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/mixedjoint.cpp.o
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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/mixedjoint.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/mixedjoint.cpp"
In file included from /usr/include/c++/9/vector:72,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Coupling.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Coupling.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Coupling.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Coupling.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Coupling.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Coupling.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Coupling.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Coupling.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact/TCP/wpmd.h:145,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact/TCP/wpmd_split.h:65,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact/TCP/wpmd_split.cpp:1:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Vector_Nt<double, 2>&}; _Tp = Vector_Nt<double, 2>; _Alloc = std::allocator<Vector_Nt<double, 2> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Vector_Nt<double, 2> >::iterator' {aka '__gnu_cxx::__normal_iterator<Vector_Nt<double, 2>*, std::vector<Vector_Nt<double, 2> > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[  1%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/norm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" 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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/norm.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/norm.cpp"
[  1%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dipole.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dipole.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dipole.cpp"
[  1%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/onbody.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/onbody.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/onbody.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dipole.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dipole.cpp:17:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  1%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/onfunctions.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/onfunctions.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/onfunctions.cpp"
[  1%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/onsolver.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/onsolver.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/onsolver.cpp"
[  1%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/particle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/particle.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/particle.cpp"
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {WavePacket}; _Tp = WavePacket; _Alloc = std::allocator<WavePacket>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<WavePacket>::iterator' {aka '__gnu_cxx::__normal_iterator<WavePacket*, std::vector<WavePacket> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<WavePacket>::iterator' {aka '__gnu_cxx::__normal_iterator<WavePacket*, std::vector<WavePacket> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'int AWPMD_split::add_split(Vector_3&, Vector_3&, double&, double&, Vector_2&, double, double, int)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<WavePacket*, std::vector<WavePacket> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact/TCP/wpmd.h:145,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact/TCP/wpmd_split.h:65,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact/TCP/wpmd_split.cpp:1:
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Vector_Nt<double, 2>*, std::vector<Vector_Nt<double, 2> > >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[  1%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/poemsobject.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" 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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/poemsobject.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/poemsobject.cpp"
[  1%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/poemstreenode.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" 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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/poemstreenode.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/poemstreenode.cpp"
[  1%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/point.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi 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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/point.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/point.cpp"
[  2%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/prismaticjoint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" 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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" 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[  2%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dpd.cpp.o
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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dpd.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dpd.cpp"
[  2%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/revolutejoint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/revolutejoint.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/revolutejoint.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dpd.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dpd.cpp:17:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  2%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/rigidbody.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/rigidbody.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/rigidbody.cpp"
[  2%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/rowmatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi 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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" 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[  2%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/solver.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi 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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/solver.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/solver.cpp"
[  2%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingEnergy.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" 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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" 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[  2%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/sphericaljoint.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" 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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/sphericaljoint.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/sphericaljoint.cpp"
[  2%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_ellipsoid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_ellipsoid.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_ellipsoid.cpp"
[  2%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/system.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/system.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/system.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_ellipsoid.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_ellipsoid.cpp:16:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  2%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/vect3.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/vect3.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/vect3.cpp"
[  2%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/vect4.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/vect4.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/vect4.cpp"
[  2%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/vect6.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi 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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" 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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/vect6.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/vect6.cpp"
[  2%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/virtualcolmatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" 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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" 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[  2%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/virtualmatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi 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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/virtualmatrix.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/virtualmatrix.cpp"
[  3%] Linking CXX static library libawpmd.a
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/usr/bin/ranlib libawpmd.a
make[3]: Leaving directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build'
[  3%] Built target awpmd
make -f CMakeFiles/meam.dir/build.make CMakeFiles/meam.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build'
cd "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/cmake" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/cmake" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/CMakeFiles/meam.dir/DependInfo.cmake" --color=
Scanning dependencies of target meam
make[3]: Leaving directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build'
make -f CMakeFiles/meam.dir/build.make CMakeFiles/meam.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build'
[  3%] Building Fortran object CMakeFiles/meam.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_data.F.o
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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" 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[  3%] Building C object CMakeFiles/meam.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/fm_exp.c.o
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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/meam.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/fm_exp.c.o"   -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/fm_exp.c"
/usr/bin/cmake -E cmake_copy_f90_mod meam_data.mod CMakeFiles/meam.dir/meam_data.mod.stamp GNU
[  3%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_three.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" 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[  3%] Building Fortran object CMakeFiles/meam.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_cleanup.F.o
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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" 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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong   -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_cleanup.F" -o "CMakeFiles/meam.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_cleanup.F.o"
[  3%] Building Fortran object CMakeFiles/meam.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_dens_final.F.o
/usr/bin/gfortran -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong   -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_dens_final.F" -o "CMakeFiles/meam.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_dens_final.F.o"
[  3%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/virtualrowmatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" 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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/virtualrowmatrix.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/virtualrowmatrix.cpp"
[  3%] Building Fortran object CMakeFiles/meam.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_dens_init.F.o
/usr/bin/gfortran -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong   -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_dens_init.F" -o "CMakeFiles/meam.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_dens_init.F.o"
[  3%] Building Fortran object CMakeFiles/meam.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_force.F.o
/usr/bin/gfortran -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong   -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_force.F" -o "CMakeFiles/meam.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_force.F.o"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_three.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_three.cpp:16:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  3%] Building CXX object CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/workspace.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/poems.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/workspace.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems/workspace.cpp"
[  3%] Building Fortran object CMakeFiles/meam.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_setup_done.F.o
/usr/bin/gfortran -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong   -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_setup_done.F" -o "CMakeFiles/meam.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_setup_done.F.o"
[  3%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingMass.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingMass.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingMass.cpp"
[  4%] Building Fortran object CMakeFiles/meam.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_setup_global.F.o
/usr/bin/gfortran -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong   -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_setup_global.F" -o "CMakeFiles/meam.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_setup_global.F.o"
[  4%] Building Fortran object CMakeFiles/meam.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam/meam_setup_param.F.o
/usr/bin/gfortran -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi 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make[3]: Leaving directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build'
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[  5%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingMomentum.cpp.o
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make[3]: Leaving directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build'
[  5%] Built target poems
[  5%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingMomentumEnergy.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingMomentumEnergy.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingMomentumEnergy.cpp"
[  5%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_beck.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_beck.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_beck.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_beck.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_beck.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  5%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_beck_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_beck_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_beck_ext.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_beck.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_beck_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  5%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Coupling.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingMomentum.h:7,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingMomentum.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Coupling.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingMomentum.h:7,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingMomentum.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Coupling.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingMomentum.h:7,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingMomentum.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[  5%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long.cpp"
make -f CMakeFiles/h5md.dir/build.make CMakeFiles/h5md.dir/depend
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cd "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/cmake" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/cmake" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/CMakeFiles/h5md.dir/DependInfo.cmake" --color=
Scanning dependencies of target h5md
make[3]: Leaving directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build'
make -f CMakeFiles/h5md.dir/build.make CMakeFiles/h5md.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build'
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Coupling.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingMomentumEnergy.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingMomentumEnergy.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
[  5%] Building C object CMakeFiles/h5md.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/src/ch5md.c.o
/usr/bin/cc -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/h5md.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/src/ch5md.c.o"   -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/src/ch5md.c"
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Coupling.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingMomentumEnergy.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingMomentumEnergy.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Coupling.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingMomentumEnergy.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_CouplingMomentumEnergy.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  5%] Linking C static library libh5md.a
/usr/bin/cmake -P CMakeFiles/h5md.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/h5md.dir/link.txt --verbose=1
/usr/bin/ar qc libh5md.a  "CMakeFiles/h5md.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/src/ch5md.c.o"
/usr/bin/ranlib libh5md.a
make[3]: Leaving directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build'
[  5%] Built target h5md
[  5%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.cpp"
[  5%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long_cs.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long_cs.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long_cs.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long_cs.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build'
cd "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/cmake" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/cmake" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build" "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/CMakeFiles/ocl_get_devices.dir/DependInfo.cmake" --color=
Scanning dependencies of target ocl_get_devices
make[3]: Leaving directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build'
make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build'
[  5%] Building CXX object CMakeFiles/ocl_get_devices.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ucl_get_devices.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DUCL_OPENCL -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/ocl_get_devices.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ucl_get_devices.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ucl_get_devices.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_device.h:35,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ucl_get_devices.cpp:25:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  6%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long_cs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long_cs_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long_cs_ext.cpp"
In file included from /usr/include/c++/9/vector:72,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_device.h:28,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ucl_get_devices.cpp:25:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ucl_opencl::OCLProperties&}; _Tp = ucl_opencl::OCLProperties; _Alloc = std::allocator<ucl_opencl::OCLProperties>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ucl_opencl::OCLProperties>::iterator' {aka '__gnu_cxx::__normal_iterator<ucl_opencl::OCLProperties*, std::vector<ucl_opencl::OCLProperties> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_device.h:28,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ucl_get_devices.cpp:25:
/usr/include/c++/9/bits/stl_vector.h: In member function 'void ucl_opencl::UCL_Device::add_properties(cl_device_id)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ucl_opencl::OCLProperties*, std::vector<ucl_opencl::OCLProperties> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[  6%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long_ext.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long_cs.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long_cs_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  6%] Linking CXX executable ocl_get_devices
/usr/bin/cmake -E cmake_link_script CMakeFiles/ocl_get_devices.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp   -Wl,-z,relro  -rdynamic "CMakeFiles/ocl_get_devices.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ucl_get_devices.cpp.o"  -o ocl_get_devices -lOpenCL 
make[3]: Leaving directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build'
[  6%] Built target ocl_get_devices
[  6%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Transfer.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Transfer.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Transfer.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_long_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  6%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TransferKernel.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TransferKernel.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TransferKernel.cpp"
[  6%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  6%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf_cs.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf_cs.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf_cs.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf_cs.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  6%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf_cs_ext.cpp"
In file included from /usr/include/c++/9/vector:72,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Transfer.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TransferKernel.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TransferKernel.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void ATC_matrix::SparseMatrix<T>::add(ATC_matrix::INDEX, ATC_matrix::INDEX, T) [with T = double]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Transfer.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TransferKernel.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TransferKernel.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Transfer.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TransferKernel.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TransferKernel.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Transfer.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TransferKernel.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TransferKernel.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf_cs.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf_cs_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  6%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf_ext.cpp"
[  6%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_ext.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_coul_wolf_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_born_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  6%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TransferPartitionOfUnity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TransferPartitionOfUnity.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TransferPartitionOfUnity.cpp"
[  6%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  6%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul.cpp"
In file included from /usr/include/c++/9/vector:72,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  6%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul_ext.cpp"
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Transfer.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Transfer.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Transfer.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Transfer.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Transfer.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Transfer.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Transfer.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TransferPartitionOfUnity.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TransferPartitionOfUnity.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Transfer.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TransferPartitionOfUnity.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TransferPartitionOfUnity.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Transfer.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TransferPartitionOfUnity.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TransferPartitionOfUnity.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[  6%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul_long.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul_long.cpp"
[  6%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomToMoleculeTransfer.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomToMoleculeTransfer.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomToMoleculeTransfer.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul_long.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul_long.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/c++/9/vector:72,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Method.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Transfer.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_Transfer.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void ATC_matrix::SparseMatrix<T>::set(ATC_matrix::INDEX, ATC_matrix::INDEX, T) [with T = double]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[  6%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul_long_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul_long_ext.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul_long.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_coul_long_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  6%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_ext.cpp"
[  6%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomicRegulator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomicRegulator.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomicRegulator.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_buck_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  6%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_charmm_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_charmm_long.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_charmm_long.cpp"
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LammpsInterface.h:25,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantity.h:7,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferOperator.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomToMoleculeTransfer.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomToMoleculeTransfer.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LammpsInterface.h:25,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantity.h:7,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferOperator.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomToMoleculeTransfer.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomToMoleculeTransfer.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LammpsInterface.h:25,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantity.h:7,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferOperator.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomToMoleculeTransfer.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomToMoleculeTransfer.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_charmm_long.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_charmm_long.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  6%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_charmm_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_charmm_long_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_charmm_long_ext.cpp"
[  7%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_colloid.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_colloid.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_charmm_long.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_charmm_long_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_colloid.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_colloid.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  7%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/BodyForce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/BodyForce.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/BodyForce.cpp"
[  7%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/CBLattice.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/CBLattice.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/CBLattice.cpp"
[  7%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_colloid_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_colloid_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_colloid_ext.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_colloid.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_colloid_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  7%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul.cpp"
In file included from /usr/include/c++/9/vector:72,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/CBLattice.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/CBLattice.cpp:1:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[  7%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_debye.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_debye.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_debye.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_debye.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_debye.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  7%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/CauchyBorn.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/CauchyBorn.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/CauchyBorn.cpp"
In file included from /usr/include/c++/9/vector:72,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomicRegulator.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomicRegulator.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomicRegulator.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomicRegulator.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomicRegulator.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomicRegulator.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomicRegulator.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomicRegulator.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[  8%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/CbPotential.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/CbPotential.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/CbPotential.cpp"
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[  8%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_debye_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_debye_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_debye_ext.cpp"
[  8%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ChargeRegulator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ChargeRegulator.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ChargeRegulator.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_debye.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_debye_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  8%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_dsf.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_dsf.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_dsf.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_dsf.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  8%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_dsf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_dsf_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_dsf_ext.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_dsf.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_dsf_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  8%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ConcentrationRegulator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ConcentrationRegulator.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ConcentrationRegulator.cpp"
[  8%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_ext.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  8%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long.cpp"
[  8%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElasticTimeIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElasticTimeIntegrator.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElasticTimeIntegrator.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  8%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long_cs.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long_cs.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long_cs.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long_cs.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/c++/9/set:60,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomicRegulator.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ChargeRegulator.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ChargeRegulator.cpp:1:
/usr/include/c++/9/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const int&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> >; _KeyOfValue = std::_Select1st<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> >, std::_Select1st<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > >, std::less<int>, std::allocator<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[  8%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long_cs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" 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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long_cs_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long_cs_ext.cpp"
In file included from /usr/include/c++/9/map:61,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomicRegulator.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ChargeRegulator.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ChargeRegulator.cpp:1:
/usr/include/c++/9/bits/stl_map.h: In member function 'virtual void ATC::ChargeRegulatorMethodEffectiveCharge::initialize()':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> >, std::_Select1st<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > >, std::less<int>, std::allocator<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomicRegulator.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ChargeRegulator.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ChargeRegulator.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomicRegulator.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ChargeRegulator.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ChargeRegulator.cpp:1:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomicRegulator.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ChargeRegulator.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ChargeRegulator.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long_cs.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long_cs_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[  8%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long_ext.cpp"
[  8%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElectronChargeDensity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElectronChargeDensity.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElectronChargeDensity.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_coul_long_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  8%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElectronDragPower.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElectronDragPower.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElectronDragPower.cpp"
[  8%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.cpp"
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Matrix.h:3,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/DenseMatrix.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixLibrary.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TimeIntegrator.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElasticTimeIntegrator.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElasticTimeIntegrator.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Matrix.h:3,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/DenseMatrix.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixLibrary.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TimeIntegrator.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElasticTimeIntegrator.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElasticTimeIntegrator.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Matrix.h:3,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/DenseMatrix.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixLibrary.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TimeIntegrator.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElasticTimeIntegrator.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElasticTimeIntegrator.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.cpp:16:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[  8%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElectronFlux.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElectronFlux.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElectronFlux.cpp"
[  8%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElectronHeatCapacity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" 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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElectronHeatCapacity.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElectronHeatCapacity.cpp"
[  8%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElectronHeatFlux.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElectronHeatFlux.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElectronHeatFlux.cpp"
In file included from /usr/include/c++/9/vector:72,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_device.h:28,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:28,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.cpp:16:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ucl_opencl::OCLProperties&}; _Tp = ucl_opencl::OCLProperties; _Alloc = std::allocator<ucl_opencl::OCLProperties>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ucl_opencl::OCLProperties>::iterator' {aka '__gnu_cxx::__normal_iterator<ucl_opencl::OCLProperties*, std::vector<ucl_opencl::OCLProperties> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_device.h:28,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:28,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.cpp:16:
/usr/include/c++/9/bits/stl_vector.h: In member function 'void ucl_opencl::UCL_Device::add_properties(cl_device_id)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ucl_opencl::OCLProperties*, std::vector<ucl_opencl::OCLProperties> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[  8%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElectronPhononExchange.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElectronPhononExchange.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ElectronPhononExchange.cpp"
[  8%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModel.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" 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[  8%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" 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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj.cpp"
[  8%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelDriftDiffusion.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dipole.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  9%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj_ext.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dipole.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  9%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelElectrostatic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelElectrostatic.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelElectrostatic.cpp"
[  9%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj_sf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj_sf.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj_sf.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dipole.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj_sf.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj_sf.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  9%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelTwoTemperature.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelTwoTemperature.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelTwoTemperature.cpp"
[  9%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj_sf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj_sf_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj_sf_ext.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dipole.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj_sf.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_lj_sf_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  9%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_long_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_long_lj.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_long_lj.cpp"
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModel.h:8,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelTwoTemperature.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelDriftDiffusion.h:8,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelDriftDiffusion.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModel.h:8,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelTwoTemperature.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelDriftDiffusion.h:8,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelDriftDiffusion.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModel.h:8,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelTwoTemperature.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelDriftDiffusion.h:8,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelDriftDiffusion.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dipole.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_long_lj.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_long_lj.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/c++/9/vector:72,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelDriftDiffusion.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelDriftDiffusion.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[  9%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_long_lj_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_long_lj_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_long_lj_ext.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dipole.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_long_lj.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dipole_long_lj_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[  9%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dpd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dpd.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dpd.cpp"
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModel.h:8,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelTwoTemperature.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelTwoTemperature.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModel.h:8,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelTwoTemperature.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelTwoTemperature.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
[  9%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FE_Element.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FE_Element.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FE_Element.cpp"
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModel.h:8,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelTwoTemperature.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelTwoTemperature.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dpd.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dpd.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dpd.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/c++/9/map:60,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModel.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelElectrostatic.h:7,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelElectrostatic.cpp:2:
/usr/include/c++/9/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const int&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> >; _KeyOfValue = std::_Select1st<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> >, std::_Select1st<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > >, std::less<int>, std::allocator<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 10%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FE_Engine.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FE_Engine.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FE_Engine.cpp"
In file included from /usr/include/c++/9/map:61,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModel.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelElectrostatic.h:7,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelElectrostatic.cpp:2:
/usr/include/c++/9/bits/stl_map.h: In member function 'void ATC::ExtrinsicModelElectrostatic::add_charged_surface(const string&, double)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> >, std::_Select1st<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > >, std::less<int>, std::allocator<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, std::pair<ATC_matrix::DenseVector<double>, double> > >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 10%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dpd_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dpd_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dpd_ext.cpp"
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModel.h:8,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelElectrostatic.h:7,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelElectrostatic.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModel.h:8,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelElectrostatic.h:7,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelElectrostatic.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModel.h:8,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelElectrostatic.h:7,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ExtrinsicModelElectrostatic.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_dpd.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dpd.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_dpd_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 10%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FE_Interpolate.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FE_Interpolate.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FE_Interpolate.cpp"
[ 10%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FE_Mesh.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FE_Mesh.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FE_Mesh.cpp"
[ 10%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam_alloy_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam_alloy_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam_alloy_ext.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam_alloy_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam_ext.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam_fs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam_fs_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam_fs_ext.cpp"
In file included from /usr/include/c++/9/vector:72,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FE_Element.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FE_Mesh.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_eam_fs_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gauss.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gauss.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gauss.cpp"
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gauss.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gauss.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/c++/9/vector:72,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FE_Engine.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FE_Engine.cpp:1:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 10%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FieldEulerIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FieldEulerIntegrator.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FieldEulerIntegrator.cpp"
[ 10%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gauss_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gauss_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gauss_ext.cpp"
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FE_Engine.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FE_Engine.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FE_Engine.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FE_Engine.cpp:1:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FE_Engine.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FE_Engine.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gauss.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gauss_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gayberne.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gayberne.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gayberne.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_ellipsoid.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gayberne.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gayberne.cpp:27:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/c++/9/vector:67,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FE_Element.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FE_Mesh.cpp:2:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void ATC::FE_Rectangular3DMesh::partition_mesh()':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void ATC::FE_Uniform3DMesh::partition_mesh()':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 10%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gayberne_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gayberne_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gayberne_ext.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_ellipsoid.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gayberne.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_gayberne_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj.cpp"
[ 11%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FieldManager.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FieldManager.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FieldManager.cpp"
In file included from /usr/include/c++/9/vector:72,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:17,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array2D.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FieldEulerIntegrator.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FieldEulerIntegrator.cpp:1:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void ATC_matrix::SparseMatrix<T>::set(ATC_matrix::INDEX, ATC_matrix::INDEX, T) [with T = double]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array2D.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FieldEulerIntegrator.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FieldEulerIntegrator.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array2D.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FieldEulerIntegrator.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FieldEulerIntegrator.cpp:1:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array2D.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FieldEulerIntegrator.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FieldEulerIntegrator.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj96.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj96.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj96.cpp"
[ 11%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj96_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj96_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj96_ext.cpp"
[ 11%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_class2_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_class2_long.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_class2_long.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj96.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj96.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj96.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj96_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_class2_long.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_class2_long.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 11%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Function.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Function.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Function.cpp"
[ 11%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_class2_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_class2_long_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_class2_long_ext.cpp"
[ 11%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_class2_long.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_class2_long_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_debye.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_debye.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_debye.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_debye.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_debye.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_debye_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_debye_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_debye_ext.cpp"
[ 11%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FundamentalAtomicQuantity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FundamentalAtomicQuantity.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FundamentalAtomicQuantity.cpp"
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FieldManager.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FieldManager.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FieldManager.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FieldManager.cpp:1:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_debye.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_debye_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FieldManager.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FieldManager.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 11%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_ext.cpp"
[ 11%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_long.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_long.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/c++/9/vector:72,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FieldManager.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/FieldManager.cpp:1:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_long.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_long.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_long_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_long_ext.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_long.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_long_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 11%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/GhostManager.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/GhostManager.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/GhostManager.cpp"
[ 11%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_msm.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_msm.cpp"
[ 11%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_msm_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_msm_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_msm_ext.cpp"
[ 11%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_cubic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_cubic.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_cubic.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_msm.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_msm.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_msm.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_coul_msm_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_cubic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_cubic.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 11%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ImplicitSolveOperator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ImplicitSolveOperator.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ImplicitSolveOperator.cpp"
[ 11%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/InterscaleOperators.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/InterscaleOperators.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/InterscaleOperators.cpp"
[ 12%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_cubic_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_cubic_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_cubic_ext.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_cubic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_cubic_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_dsf.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_dsf.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_dsf.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_dsf.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/c++/9/vector:72,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:17,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Matrix.h:3,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/DenseMatrix.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixLibrary.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/GhostManager.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/GhostManager.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 12%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_dsf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_dsf_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_dsf_ext.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_dsf.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_dsf_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Matrix.h:3,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/DenseMatrix.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixLibrary.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/GhostManager.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/GhostManager.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(std::pair<int, double>, std::pair<int, double>)>]':
/usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
   78 |     __move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b,
      |     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(std::pair<int, double>, std::pair<int, double>)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(std::pair<int, double>, std::pair<int, double>)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Matrix.h:3,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/DenseMatrix.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixLibrary.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/GhostManager.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/GhostManager.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >; _Distance = int; _Tp = std::pair<int, double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(std::pair<int, double>, std::pair<int, double>)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Matrix.h:3,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/DenseMatrix.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixLibrary.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/GhostManager.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/GhostManager.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(std::pair<int, double>, std::pair<int, double>)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1920:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
 1920 |       std::__move_median_to_first(__first, __first + 1, __mid, __last - 1,
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1921 |       __comp);
      |       ~~~~~~~                     
/usr/include/c++/9/bits/stl_algo.h:1920:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array2D.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ImplicitSolveOperator.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ImplicitSolveOperator.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array2D.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ImplicitSolveOperator.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ImplicitSolveOperator.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'int ATC::GhostModifierDampedHarmonicLayers::find_layers()':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array2D.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ImplicitSolveOperator.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ImplicitSolveOperator.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 12%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 12%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KD_Tree.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KD_Tree.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KD_Tree.cpp"
[ 12%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KernelFunction.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KernelFunction.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KernelFunction.cpp"
[ 12%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand_coul_long.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand_coul_long.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand_coul_long.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand_coul_long.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/c++/9/vector:72,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:17,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array2D.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KD_Tree.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KD_Tree.cpp:1:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Node&}; _Tp = Node; _Alloc = std::allocator<Node>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Node>::iterator' {aka '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {Node}; _Tp = Node; _Alloc = std::allocator<Node>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Node>::iterator' {aka '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array2D.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KD_Tree.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KD_Tree.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function '_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Node*, std::vector<Node> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const Node>]':
/usr/include/c++/9/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
  112 |     __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last,
      |     ^~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Node*, std::vector<Node> >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(Node, Node)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Node*, std::vector<Node> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(Node, Node)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array2D.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KD_Tree.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KD_Tree.cpp:1:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Node*, std::vector<Node> >; _Distance = int; _Tp = Node; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(Node, Node)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array2D.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KD_Tree.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KD_Tree.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<Node*, std::vector<Node> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(Node, Node)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In constructor 'KD_Tree::KD_Tree(std::vector<Node>*, std::vector<std::pair<int, std::vector<Node> > >*, int)':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
  161 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
  162 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:17,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array2D.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KD_Tree.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KD_Tree.cpp:1:
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array2D.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KD_Tree.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KD_Tree.cpp:1:
/usr/include/c++/9/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
  161 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
  162 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:17,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array2D.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KD_Tree.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KD_Tree.cpp:1:
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:17,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array2D.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KD_Tree.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KD_Tree.cpp:1:
/usr/include/c++/9/bits/vector.tcc: In static member function 'static KD_Tree* KD_Tree::create_KD_tree(int, int, const DENS_MAT*, int, const ATC_matrix::Array2D<int>&)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:17,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array2D.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KD_Tree.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KD_Tree.cpp:1:
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Node*, std::vector<Node> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 12%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand_coul_long_ext.cpp"
[ 12%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KinetoThermostat.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KinetoThermostat.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KinetoThermostat.cpp"
[ 12%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Kinetostat.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Kinetostat.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Kinetostat.cpp"
[ 13%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LammpsInterface.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LammpsInterface.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LammpsInterface.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand_coul_long.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand_coul_long_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand_ext.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_expand_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_ext.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_gromacs.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_gromacs.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_gromacs.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_gromacs.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_gromacs.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/c++/9/vector:72,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LammpsInterface.h:25,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LammpsInterface.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LammpsInterface.h:25,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LammpsInterface.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LammpsInterface.h:25,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LammpsInterface.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LammpsInterface.h:25,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LammpsInterface.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 13%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_gromacs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_gromacs_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_gromacs_ext.cpp"
[ 13%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_gromacs.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_gromacs_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomicRegulator.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KinetoThermostat.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KinetoThermostat.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomicRegulator.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KinetoThermostat.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KinetoThermostat.cpp:1:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomicRegulator.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KinetoThermostat.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/KinetoThermostat.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 13%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LinearSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LinearSolver.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LinearSolver.cpp"
[ 13%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk_ext.cpp"
[ 13%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MPI_Wrappers.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MPI_Wrappers.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MPI_Wrappers.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk_long.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk_long.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk_long.cpp"
[ 13%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Material.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Material.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Material.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk_long.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk_long.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomicRegulator.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Kinetostat.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Kinetostat.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomicRegulator.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Kinetostat.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Kinetostat.cpp:1:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LinearSolver.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LinearSolver.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomicRegulator.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Kinetostat.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Kinetostat.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LinearSolver.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LinearSolver.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LinearSolver.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LinearSolver.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LinearSolver.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LinearSolver.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 13%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk_long_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk_long_ext.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_charge.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk_long.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_lj_sdk_long_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_mie.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_mie.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_mie.cpp"
[ 13%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Matrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Matrix.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Matrix.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_mie.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_mie.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 13%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MeshReader.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MeshReader.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MeshReader.cpp"
[ 14%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_mie_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_mie_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_mie_ext.cpp"
[ 14%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_morse.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_morse.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_mie.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_mie_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_morse.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_morse.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 14%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MoleculeSet.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MoleculeSet.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MoleculeSet.cpp"
[ 14%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_morse_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_morse_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_morse_ext.cpp"
[ 14%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/NonLinearSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/NonLinearSolver.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/NonLinearSolver.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_morse.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_morse_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_neighbor.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_neighbor.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_neighbor.cpp"
[ 14%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_neighbor_shared.cpp.o
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-I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_neighbor_shared.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_neighbor_shared.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_neighbor.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_neighbor.cpp:18:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_device.h:35,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_kernel.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_neighbor_shared.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_neighbor_shared.cpp:17:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/c++/9/vector:72,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/NonLinearSolver.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/NonLinearSolver.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void ATC_matrix::SparseMatrix<T>::set(ATC_matrix::INDEX, ATC_matrix::INDEX, T) [with T = double]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/NonLinearSolver.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/NonLinearSolver.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/NonLinearSolver.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/NonLinearSolver.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/NonLinearSolver.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/NonLinearSolver.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 14%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/OutputManager.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/OutputManager.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/OutputManager.cpp"
[ 14%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_pppm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_pppm.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_pppm.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_pppm.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_pppm.cpp:25:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 14%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PaqAtcUtility.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PaqAtcUtility.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PaqAtcUtility.cpp"
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/OutputManager.cpp: In member function 'void ATC::OutputManager::read_restart_file(std::string, ATC::RESTART_LIST*)':
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/OutputManager.cpp:164:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  164 |         fread(&myVal,sizeof(double),1,fp);
      |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 14%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_pppm_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_pppm_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_pppm_ext.cpp"
In file included from /usr/include/c++/9/vector:72,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/OutputManager.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/OutputManager.cpp:5:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_pppm.h:20,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_pppm_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_re_squared.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_re_squared.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_re_squared.cpp"
[ 14%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ParDiagonalMatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ParDiagonalMatrix.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ParDiagonalMatrix.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_ellipsoid.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_re_squared.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_re_squared.cpp:27:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/c++/9/vector:67,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/OutputManager.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/OutputManager.cpp:5:
/usr/include/c++/9/bits/stl_vector.h: In member function 'void ATC::OutputManager::write_data(double, ATC::OUTPUT_LIST*, const int*)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 14%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_re_squared_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_re_squared_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_re_squared_ext.cpp"
[ 14%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ParSparseMatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ParSparseMatrix.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ParSparseMatrix.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_ellipsoid.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_re_squared.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_re_squared_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 14%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantityLibrary.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantityLibrary.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantityLibrary.cpp"
[ 14%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_soft.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_soft.cpp"
[ 14%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_soft_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_soft_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_soft_ext.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_soft.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_soft.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_soft.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_soft_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Matrix.h:3,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/DenseMatrix.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixLibrary.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/SparseMatrix.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ParSparseMatrix.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ParSparseMatrix.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Matrix.h:3,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/DenseMatrix.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixLibrary.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/SparseMatrix.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ParSparseMatrix.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ParSparseMatrix.cpp:1:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Matrix.h:3,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/DenseMatrix.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixLibrary.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/SparseMatrix.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ParSparseMatrix.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ParSparseMatrix.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 14%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_sw.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_sw.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_sw.cpp"
[ 14%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_sw_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_sw_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_sw_ext.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_three.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_sw.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_sw.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/c++/9/vector:72,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:17,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Matrix.h:3,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/DenseMatrix.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixLibrary.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/SparseMatrix.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ParSparseMatrix.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ParSparseMatrix.cpp:1:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void ATC_matrix::SparseMatrix<T>::set(ATC_matrix::INDEX, ATC_matrix::INDEX, T) [with T = double]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_three.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_sw.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_sw_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 14%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerPairQuantity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerPairQuantity.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerPairQuantity.cpp"
[ 14%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PhysicsModel.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PhysicsModel.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PhysicsModel.cpp"
[ 14%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_table.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_table.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_table.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_table.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_table.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/c++/9/vector:72,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LammpsInterface.h:25,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerPairQuantity.h:7,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerPairQuantity.cpp:1:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LammpsInterface.h:25,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerPairQuantity.h:7,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerPairQuantity.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LammpsInterface.h:25,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerPairQuantity.h:7,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerPairQuantity.cpp:1:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LammpsInterface.h:25,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerPairQuantity.h:7,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerPairQuantity.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 15%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_table_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_table_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_table_ext.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_table.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_table_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff.cpp"
[ 16%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PoissonSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PoissonSolver.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PoissonSolver.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_three.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array2D.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PhysicsModel.h:7,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PhysicsModel.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array2D.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PhysicsModel.h:7,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PhysicsModel.cpp:1:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array2D.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PhysicsModel.h:7,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PhysicsModel.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 16%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_ext.cpp"
In file included from /usr/include/c++/9/vector:72,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LammpsInterface.h:25,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantity.h:7,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantityLibrary.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LammpsInterface.h:25,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantity.h:7,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantityLibrary.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LammpsInterface.h:25,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantity.h:7,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantityLibrary.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PhysicsModel.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PhysicsModel.cpp:1:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LammpsInterface.h:25,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantity.h:7,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantityLibrary.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void ATC_matrix::SparseMatrix<T>::set(ATC_matrix::INDEX, ATC_matrix::INDEX, T) [with T = double]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_three.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_mod.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_mod.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_mod.cpp"
[ 16%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PolynomialSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PolynomialSolver.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PolynomialSolver.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_three.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_mod.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_mod.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_mod_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_mod_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_mod_ext.cpp"
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array2D.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PoissonSolver.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PoissonSolver.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array2D.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PoissonSolver.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PoissonSolver.cpp:1:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array2D.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PoissonSolver.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PoissonSolver.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_three.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_mod.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_mod_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/c++/9/vector:72,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:17,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array2D.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PoissonSolver.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PoissonSolver.cpp:1:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void ATC_matrix::SparseMatrix<T>::set(ATC_matrix::INDEX, ATC_matrix::INDEX, T) [with T = double]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 16%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PrescribedDataManager.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PrescribedDataManager.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PrescribedDataManager.cpp"
[ 16%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_zbl.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_zbl.cpp"
[ 16%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_zbl_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_zbl_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_zbl_ext.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_three.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_zbl.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_zbl.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 16%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Quadrature.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Quadrature.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Quadrature.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_three.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_zbl.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_tersoff_zbl_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_ufm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_ufm.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_ufm.cpp"
[ 16%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/SchrodingerSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/SchrodingerSolver.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/SchrodingerSolver.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_ufm.h:21,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_ufm.cpp:26:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_ufm_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_ufm_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_ufm_ext.cpp"
[ 16%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_vashishta.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_vashishta.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_vashishta.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_ufm.h:21,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_ufm_ext.cpp:22:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_three.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_vashishta.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_vashishta.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 16%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/SpeciesTimeIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/SpeciesTimeIntegrator.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/SpeciesTimeIntegrator.cpp"
[ 16%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_vashishta_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_vashishta_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_vashishta_ext.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_three.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_vashishta.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_vashishta_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa_colloid.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa_colloid.cpp"
In file included from /usr/include/c++/9/vector:72,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:17,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array2D.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/SchrodingerSolver.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/SchrodingerSolver.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void ATC_matrix::SparseMatrix<T>::set(ATC_matrix::INDEX, ATC_matrix::INDEX, T) [with T = double]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa_colloid.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa_colloid.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 16%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Stress.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Stress.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Stress.cpp"
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array2D.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/SchrodingerSolver.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/SchrodingerSolver.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array2D.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/SchrodingerSolver.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/SchrodingerSolver.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array2D.h:9,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/SchrodingerSolver.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/SchrodingerSolver.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 16%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa_colloid_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa_colloid_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa_colloid_ext.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa_colloid.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa_colloid_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 16%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ThermalTimeIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ThermalTimeIntegrator.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ThermalTimeIntegrator.cpp"
[ 16%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa_ext.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_yukawa_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_zbl.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_zbl.cpp"
[ 17%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Thermostat.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Thermostat.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Thermostat.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_zbl.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_zbl.cpp:24:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_zbl_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DNC_64BIT_DATA=0x0020 -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/gpu" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/gpu.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_zbl_ext.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_zbl_ext.cpp"
In file included from /usr/include/CL/cl.h:32,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_macros.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/geryon/ocl_timer.h:27,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_atom.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_device.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_base_atomic.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_zbl.h:19,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/gpu/lal_zbl_ext.cpp:20:
/usr/include/CL/cl_version.h:34:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)
   34 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 220 (OpenCL 2.2)")
      |                                                                                                        ^
[ 17%] Linking CXX static library libgpu.a
/usr/bin/cmake -P CMakeFiles/gpu.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/gpu.dir/link.txt --verbose=1
[ 17%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TimeFilter.cpp.o
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[ 17%] Built target gpu
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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TimeIntegrator.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TimeIntegrator.cpp"
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Matrix.h:3,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/DenseMatrix.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixLibrary.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TimeIntegrator.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ThermalTimeIntegrator.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ThermalTimeIntegrator.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Matrix.h:3,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/DenseMatrix.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixLibrary.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TimeIntegrator.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ThermalTimeIntegrator.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ThermalTimeIntegrator.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Matrix.h:3,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/DenseMatrix.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixLibrary.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TimeIntegrator.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ThermalTimeIntegrator.h:5,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ThermalTimeIntegrator.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 17%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferLibrary.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferLibrary.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferLibrary.cpp"
[ 17%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferOperator.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferOperator.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferOperator.cpp"
[ 17%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Vector.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Vector.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Vector.cpp"
[ 18%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ViscousStress.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ViscousStress.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ViscousStress.cpp"
[ 18%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationChargeDiffusion.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationChargeDiffusion.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationChargeDiffusion.cpp"
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomicRegulator.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Thermostat.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Thermostat.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomicRegulator.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Thermostat.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Thermostat.cpp:1:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/AtomicRegulator.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Thermostat.h:4,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Thermostat.cpp:1:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LammpsInterface.h:25,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantity.h:7,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferOperator.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferOperator.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LammpsInterface.h:25,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantity.h:7,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferOperator.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferOperator.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LammpsInterface.h:25,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantity.h:7,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferOperator.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferOperator.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 18%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationDiffusion.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationDiffusion.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationDiffusion.cpp"
[ 18%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationElectronContinuity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationElectronContinuity.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationElectronContinuity.cpp"
[ 18%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationElectronMomentum.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationElectronMomentum.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationElectronMomentum.cpp"
[ 18%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationElectronTemperature.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi 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-I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationElectronTemperature.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationElectronTemperature.cpp"
In file included from /usr/include/c++/9/vector:72,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferLibrary.h:8,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferLibrary.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > >::iterator' {aka '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ATC_matrix::TRI_COORD<double>}; _Tp = ATC_matrix::TRI_COORD<double>; _Alloc = std::allocator<ATC_matrix::TRI_COORD<double> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LammpsInterface.h:25,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantity.h:7,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferOperator.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferLibrary.h:11,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferLibrary.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LammpsInterface.h:25,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantity.h:7,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferOperator.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferLibrary.h:11,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferLibrary.cpp:2:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Distance = int; _Tp = ATC_matrix::TRI_COORD<double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Utility.h:15,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/MatrixDef.h:23,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/Array.h:10,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/ATC_TypeDefs.h:14,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/LammpsInterface.h:25,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantity.h:7,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferOperator.h:6,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferLibrary.h:11,
                 from /<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/TransferLibrary.cpp:2:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const ATC_matrix::TRI_COORD<double>&, const ATC_matrix::TRI_COORD<double>&)>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 18%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationMassDiffusion.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationMassDiffusion.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationMassDiffusion.cpp"
/usr/include/c++/9/bits/stl_algo.h: In member function 'ATC_matrix::INDEX ATC_matrix::SparseMatrix<T>::CountUniqueTriplets() [with T = double]':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ATC_matrix::TRI_COORD<double>*, std::vector<ATC_matrix::TRI_COORD<double>, std::allocator<ATC_matrix::TRI_COORD<double> > > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 18%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationMomentum.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationMomentum.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationMomentum.cpp"
[ 18%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationPhononTemperature.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationPhononTemperature.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationPhononTemperature.cpp"
[ 18%] Building CXX object CMakeFiles/atc.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc/WeakEquationPoisson.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi 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[ 18%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/main.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/angle_deprecated.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/angle_deprecated.cpp"
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/main.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/main.cpp"
[ 18%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/angle_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/angle_hybrid.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/angle_hybrid.cpp"
[ 18%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/angle_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/angle_zero.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/angle_zero.cpp"
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/angle_hybrid.cpp: In member function 'virtual void LAMMPS_NS::AngleHybrid::read_restart(FILE*)':
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/angle_hybrid.cpp:338:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  338 |   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
      |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/angle_hybrid.cpp:347:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  347 |     if (me == 0) fread(&n,sizeof(int),1,fp);
      |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/angle_hybrid.cpp:350:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  350 |     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
      |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 18%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom.cpp"
[ 18%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_map.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_map.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_map.cpp"
[ 18%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec.cpp"
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/angle_zero.cpp: In member function 'virtual void LAMMPS_NS::AngleZero::read_restart(FILE*)':
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/angle_zero.cpp:133:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  133 |     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 18%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_atomic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_atomic.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_atomic.cpp"
[ 19%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_body.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_body.cpp"
[ 19%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_charge.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_charge.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_charge.cpp"
[ 19%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_ellipsoid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_ellipsoid.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_ellipsoid.cpp"
[ 19%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_hybrid.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_hybrid.cpp"
[ 19%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_line.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_line.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_line.cpp"
[ 19%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_sphere.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_sphere.cpp"
[ 19%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_tri.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/atom_vec_tri.cpp"
[ 19%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/balance.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/balance.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/balance.cpp"
[ 19%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/body.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/body.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/body.cpp"
[ 19%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond.cpp"
[ 19%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond_deprecated.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond_deprecated.cpp"
[ 19%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond_hybrid.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond_hybrid.cpp"
[ 19%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond_zero.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond_zero.cpp"
[ 19%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/change_box.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/change_box.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/change_box.cpp"
[ 19%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/citeme.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/citeme.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/citeme.cpp"
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond_hybrid.cpp: In member function 'virtual void LAMMPS_NS::BondHybrid::read_restart(FILE*)':
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond_hybrid.cpp:339:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  339 |   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
      |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond_hybrid.cpp:348:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  348 |     if (me == 0) fread(&n,sizeof(int),1,fp);
      |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond_hybrid.cpp:351:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  351 |     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
      |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond_zero.cpp: In member function 'virtual void LAMMPS_NS::BondZero::read_restart(FILE*)':
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/bond_zero.cpp:131:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  131 |     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 20%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/comm.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/comm.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/comm.cpp"
[ 20%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/comm_brick.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/comm_brick.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/comm_brick.cpp"
[ 20%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/comm_tiled.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/comm_tiled.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/comm_tiled.cpp"
[ 20%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute.cpp"
[ 20%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_adf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_adf.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_adf.cpp"
[ 20%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_aggregate_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_aggregate_atom.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_aggregate_atom.cpp"
[ 20%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_angle.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_angle.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_angle.cpp"
[ 20%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_angle_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_angle_local.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_angle_local.cpp"
[ 20%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_angmom_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_angmom_chunk.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_angmom_chunk.cpp"
[ 20%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_bond.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_bond.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_bond.cpp"
[ 20%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_bond_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_bond_local.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_bond_local.cpp"
[ 20%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_centro_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_centro_atom.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_centro_atom.cpp"
[ 20%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_chunk_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_chunk_atom.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_chunk_atom.cpp"
[ 20%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_chunk_spread_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_chunk_spread_atom.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_chunk_spread_atom.cpp"
[ 20%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_cluster_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_cluster_atom.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_cluster_atom.cpp"
[ 21%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_cna_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_cna_atom.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_cna_atom.cpp"
[ 21%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_com.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_com.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_com.cpp"
[ 21%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_com_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_com_chunk.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_com_chunk.cpp"
[ 21%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_contact_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_contact_atom.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_contact_atom.cpp"
[ 21%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_coord_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_coord_atom.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_coord_atom.cpp"
[ 21%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_deprecated.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_deprecated.cpp"
[ 21%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_dihedral.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_dihedral.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_dihedral.cpp"
[ 21%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_dihedral_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_dihedral_local.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_dihedral_local.cpp"
[ 21%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_dipole_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_dipole_chunk.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_dipole_chunk.cpp"
[ 21%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_displace_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_displace_atom.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_displace_atom.cpp"
[ 21%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_erotate_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_erotate_sphere.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_erotate_sphere.cpp"
[ 21%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_erotate_sphere_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_erotate_sphere_atom.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_erotate_sphere_atom.cpp"
[ 21%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_fragment_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_fragment_atom.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_fragment_atom.cpp"
[ 21%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_global_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_global_atom.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_global_atom.cpp"
[ 22%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_group_group.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_group_group.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_group_group.cpp"
[ 22%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_gyration.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_gyration.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_gyration.cpp"
[ 22%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_gyration_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_gyration_chunk.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_gyration_chunk.cpp"
[ 22%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_heat_flux.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_heat_flux.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_heat_flux.cpp"
[ 22%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_hexorder_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_hexorder_atom.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_hexorder_atom.cpp"
[ 22%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_improper.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_improper.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_improper.cpp"
[ 22%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_improper_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_improper_local.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_improper_local.cpp"
[ 22%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_inertia_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_inertia_chunk.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_inertia_chunk.cpp"
[ 22%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_ke.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_ke.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_ke.cpp"
[ 22%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_ke_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_ke_atom.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_ke_atom.cpp"
[ 22%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_msd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_msd.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_msd.cpp"
[ 22%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_msd_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_msd_chunk.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_msd_chunk.cpp"
[ 22%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_omega_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_omega_chunk.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_omega_chunk.cpp"
[ 22%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_orientorder_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_orientorder_atom.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_orientorder_atom.cpp"
[ 22%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_pair.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_pair.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_pair.cpp"
[ 23%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_pair_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_pair_local.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_pair_local.cpp"
[ 23%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_pe.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_pe.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_pe.cpp"
[ 23%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_pe_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_pe_atom.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_pe_atom.cpp"
[ 23%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_pressure.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_pressure.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_pressure.cpp"
[ 23%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_property_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_property_atom.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_property_atom.cpp"
[ 23%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_property_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_property_chunk.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_property_chunk.cpp"
[ 23%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_property_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_property_local.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_property_local.cpp"
[ 23%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_rdf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_rdf.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_rdf.cpp"
[ 23%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_reduce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_reduce.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_reduce.cpp"
[ 23%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_reduce_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_reduce_chunk.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_reduce_chunk.cpp"
[ 23%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_reduce_region.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_reduce_region.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_reduce_region.cpp"
[ 23%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_slice.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_slice.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_slice.cpp"
[ 23%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_stress_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_stress_atom.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_stress_atom.cpp"
[ 23%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp.cpp"
[ 24%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_chunk.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_chunk.cpp"
[ 24%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_com.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_com.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_com.cpp"
[ 24%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_deform.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_deform.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_deform.cpp"
[ 24%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_partial.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_partial.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_partial.cpp"
[ 24%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_profile.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_profile.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_profile.cpp"
[ 24%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_ramp.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_ramp.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_ramp.cpp"
[ 24%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_region.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_region.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_region.cpp"
[ 24%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_sphere.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_temp_sphere.cpp"
[ 24%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_torque_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_torque_chunk.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_torque_chunk.cpp"
[ 24%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_vacf.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_vacf.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_vacf.cpp"
[ 24%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_vcm_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_vcm_chunk.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/compute_vcm_chunk.cpp"
[ 24%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/create_atoms.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/create_atoms.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/create_atoms.cpp"
[ 24%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/create_bonds.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/create_bonds.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/create_bonds.cpp"
[ 24%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/create_box.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/create_box.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/create_box.cpp"
[ 24%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/delete_atoms.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/delete_atoms.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/delete_atoms.cpp"
[ 25%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/delete_bonds.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/delete_bonds.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/delete_bonds.cpp"
[ 25%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/deprecated.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/deprecated.cpp"
[ 25%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dihedral.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dihedral.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dihedral.cpp"
[ 25%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dihedral_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dihedral_deprecated.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dihedral_deprecated.cpp"
[ 25%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dihedral_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dihedral_hybrid.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dihedral_hybrid.cpp"
[ 25%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dihedral_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dihedral_zero.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dihedral_zero.cpp"
[ 25%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/displace_atoms.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/displace_atoms.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/displace_atoms.cpp"
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dihedral_hybrid.cpp: In member function 'virtual void LAMMPS_NS::DihedralHybrid::read_restart(FILE*)':
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dihedral_hybrid.cpp:323:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  323 |   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
      |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dihedral_hybrid.cpp:332:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  332 |     if (me == 0) fread(&n,sizeof(int),1,fp);
      |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dihedral_hybrid.cpp:335:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  335 |     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
      |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 25%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/domain.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/domain.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/domain.cpp"
[ 25%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump.cpp"
[ 25%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_atom.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_atom.cpp"
[ 25%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_cfg.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_cfg.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_cfg.cpp"
[ 25%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_custom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_custom.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_custom.cpp"
[ 25%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_dcd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_dcd.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_dcd.cpp"
[ 25%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_deprecated.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_deprecated.cpp"
[ 26%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_image.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_image.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_image.cpp"
[ 26%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_local.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_local.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_local.cpp"
[ 26%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_movie.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_movie.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_movie.cpp"
[ 26%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_xyz.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_xyz.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/dump_xyz.cpp"
[ 26%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/error.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/error.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/error.cpp"
[ 26%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/finish.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/finish.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/finish.cpp"
[ 26%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix.cpp"
[ 26%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_adapt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_adapt.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_adapt.cpp"
[ 26%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_addforce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_addforce.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_addforce.cpp"
[ 26%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_atom.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_atom.cpp"
[ 26%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_chunk.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_chunk.cpp"
[ 26%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_correlate.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_correlate.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_correlate.cpp"
[ 26%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_histo.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_histo.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_histo.cpp"
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_chunk.cpp: In member function 'virtual void LAMMPS_NS::FixAveChunk::end_of_step()':
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_chunk.cpp:1057:33: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
 1057 |       if (fileend > 0) ftruncate(fileno(fp),fileend);
      |                        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_correlate.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelate::end_of_step()':
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_correlate.cpp:537:33: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
  537 |       if (fileend > 0) ftruncate(fileno(fp),fileend);
      |                        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_histo.cpp: In member function 'virtual void LAMMPS_NS::FixAveHisto::end_of_step()':
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_histo.cpp:828:33: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
  828 |       if (fileend > 0) ftruncate(fileno(fp),fileend);
      |                        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
[ 26%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_histo_weight.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_histo_weight.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_histo_weight.cpp"
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_histo_weight.cpp: In member function 'virtual void LAMMPS_NS::FixAveHistoWeight::end_of_step()':
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_histo_weight.cpp:499:33: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
  499 |       if (fileend > 0) ftruncate(fileno(fp),fileend);
      |                        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
[ 26%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_time.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_time.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_time.cpp"
[ 27%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_aveforce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_aveforce.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_aveforce.cpp"
[ 27%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_balance.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_balance.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_balance.cpp"
[ 27%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_box_relax.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_box_relax.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_box_relax.cpp"
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)':
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_time.cpp:700:33: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
  700 |       if (fileend > 0) ftruncate(fileno(fp),fileend);
      |                        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_vector(LAMMPS_NS::bigint)':
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_ave_time.cpp:911:33: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
  911 |       if (fileend > 0) ftruncate(fileno(fp),fileend);
      |                        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
[ 27%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_controller.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_controller.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_controller.cpp"
[ 27%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_deform.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_deform.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_deform.cpp"
[ 27%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_deprecated.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_deprecated.cpp"
[ 27%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_drag.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_drag.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_drag.cpp"
[ 27%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_dt_reset.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_dt_reset.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_dt_reset.cpp"
[ 27%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_enforce2d.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_enforce2d.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_enforce2d.cpp"
[ 27%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_external.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_external.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_external.cpp"
[ 27%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_gravity.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_gravity.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_gravity.cpp"
[ 27%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_group.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_group.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_group.cpp"
[ 27%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_halt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_halt.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_halt.cpp"
[ 27%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_heat.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_heat.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_heat.cpp"
[ 28%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_indent.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_indent.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_indent.cpp"
[ 28%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_langevin.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_langevin.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_langevin.cpp"
[ 28%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_lineforce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_lineforce.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_lineforce.cpp"
[ 28%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_minimize.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_minimize.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_minimize.cpp"
[ 28%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_momentum.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_momentum.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_momentum.cpp"
[ 28%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_move.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_move.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_move.cpp"
[ 28%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_neigh_history.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_neigh_history.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_neigh_history.cpp"
[ 28%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nh.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nh.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nh.cpp"
[ 28%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nh_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nh_sphere.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nh_sphere.cpp"
[ 28%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nph.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nph.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nph.cpp"
[ 28%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nph_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nph_sphere.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nph_sphere.cpp"
[ 28%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_npt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_npt.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_npt.cpp"
[ 28%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_npt_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_npt_sphere.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_npt_sphere.cpp"
[ 28%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nve.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nve.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nve.cpp"
[ 28%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nve_limit.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nve_limit.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nve_limit.cpp"
[ 29%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nve_noforce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nve_noforce.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nve_noforce.cpp"
[ 29%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nve_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nve_sphere.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nve_sphere.cpp"
[ 29%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nvt.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nvt.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nvt.cpp"
[ 29%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nvt_sllod.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nvt_sllod.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nvt_sllod.cpp"
[ 29%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nvt_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nvt_sphere.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_nvt_sphere.cpp"
[ 29%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_planeforce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_planeforce.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_planeforce.cpp"
[ 29%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_press_berendsen.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_press_berendsen.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_press_berendsen.cpp"
[ 29%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_print.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_print.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_print.cpp"
[ 29%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_property_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_property_atom.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_property_atom.cpp"
[ 29%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_read_restart.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_read_restart.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_read_restart.cpp"
[ 29%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_recenter.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_recenter.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_recenter.cpp"
[ 29%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_respa.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_respa.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_respa.cpp"
[ 29%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_restrain.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_restrain.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_restrain.cpp"
[ 29%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_setforce.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_setforce.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_setforce.cpp"
[ 30%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_spring.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_spring.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_spring.cpp"
[ 30%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_spring_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_spring_chunk.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_spring_chunk.cpp"
[ 30%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_spring_rg.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_spring_rg.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_spring_rg.cpp"
[ 30%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_spring_self.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_spring_self.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_spring_self.cpp"
[ 30%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_store.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_store.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_store.cpp"
[ 30%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_store_force.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_store_force.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_store_force.cpp"
[ 30%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_store_state.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_store_state.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_store_state.cpp"
[ 30%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_temp_berendsen.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_temp_berendsen.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_temp_berendsen.cpp"
[ 30%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_temp_csld.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_temp_csld.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_temp_csld.cpp"
[ 30%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_temp_csvr.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_temp_csvr.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_temp_csvr.cpp"
[ 30%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_temp_rescale.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_temp_rescale.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_temp_rescale.cpp"
[ 30%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_tmd.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_tmd.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_tmd.cpp"
[ 30%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_vector.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_vector.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_vector.cpp"
[ 30%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_viscous.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_viscous.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_viscous.cpp"
[ 30%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall.cpp"
[ 31%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall_harmonic.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall_harmonic.cpp"
[ 31%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall_lj1043.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall_lj1043.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall_lj1043.cpp"
[ 31%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall_lj126.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall_lj126.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall_lj126.cpp"
[ 31%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall_lj93.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall_lj93.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall_lj93.cpp"
[ 31%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall_reflect.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall_reflect.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall_reflect.cpp"
[ 31%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall_region.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall_region.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/fix_wall_region.cpp"
[ 31%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/force.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/force.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/force.cpp"
[ 31%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/group.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/group.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/group.cpp"
[ 31%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/image.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/image.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/image.cpp"
[ 31%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance.cpp"
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/group.cpp: In member function 'void LAMMPS_NS::Group::read_restart(FILE*)':
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/group.cpp:730:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  730 |   if (me == 0) fread(&ngroup,sizeof(int),1,fp);
      |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/group.cpp:742:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  742 |     if (me == 0) fread(&n,sizeof(int),1,fp);
      |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/group.cpp:746:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  746 |       if (me == 0) fread(names[i],sizeof(char),n,fp);
      |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 31%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance_group.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance_group.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance_group.cpp"
[ 31%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance_neigh.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance_neigh.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance_neigh.cpp"
[ 31%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance_store.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance_store.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance_store.cpp"
[ 31%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance_time.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance_time.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance_time.cpp"
[ 32%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance_var.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance_var.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/imbalance_var.cpp"
[ 32%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/improper.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/improper.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/improper.cpp"
[ 32%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/improper_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/improper_deprecated.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/improper_deprecated.cpp"
[ 32%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/improper_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/improper_hybrid.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/improper_hybrid.cpp"
[ 32%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/improper_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/improper_zero.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/improper_zero.cpp"
[ 32%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/info.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/info.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/info.cpp"
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/improper_hybrid.cpp: In member function 'virtual void LAMMPS_NS::ImproperHybrid::read_restart(FILE*)':
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/improper_hybrid.cpp:320:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  320 |   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
      |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/improper_hybrid.cpp:329:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  329 |     if (me == 0) fread(&n,sizeof(int),1,fp);
      |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/improper_hybrid.cpp:332:23: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  332 |     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
      |                  ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 32%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/input.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/input.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/input.cpp"
[ 32%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/integrate.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/integrate.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/integrate.cpp"
[ 32%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/irregular.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/irregular.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/irregular.cpp"
[ 32%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/kspace.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/kspace.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/kspace.cpp"
[ 32%] Building CXX object CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/kspace_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_VTK -DLMP_HAS_NETCDF -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DNC_64BIT_DATA=0x0020 -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src" -I/usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -I/usr/lib/arm-linux-gnueabihf/openmpi/include -I/usr/include/python2.7 -I/usr/include/voro++ -I/usr/include/eigen3 -I/usr/include/vtk-6.3 -I/usr/include/freetype2 -I/usr/include/arm-linux-gnueabihf -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/ASPHERE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/BODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CLASS2" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COLLOID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/COMPRESS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/DIPOLE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GRANULAR" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/KSPACE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MANYBODY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MEAM" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MOLECULE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PERI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/REPLICA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/RIGID" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SHOCK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SNAP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/SRD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/PYTHON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/MPIIO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/VORONOI" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/POEMS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-ATC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-AWPMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-BOCS" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGDNA" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MESO" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-CGSDK" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DIFFRACTION" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DPD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-DRUDE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-EFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-FEP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-H5MD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-LB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MANIFOLD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MEAMC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MGPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MISC" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOFFF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-MOLFILE" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-NETCDF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-PHONON" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-QTB" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMD" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SMTBQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-SPH" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-TALLY" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-UEF" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-VTK" -I/usr/include/hdf5/serial -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/CORESHELL" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/QEQ" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/USER-OMP" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/OPT" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/GPU" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build/styles" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/molfile" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/meam" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/poems" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/atc" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/systems/interact" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/awpmd/ivutils/include" -I"/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/lib/h5md/include"  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp    -o "CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/kspace_deprecated.cpp.o" -c "/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/kspace_deprecated.cpp"
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/kspace.cpp: In member function 'void LAMMPS_NS::KSpace::qsum_qsq()':
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/kspace.cpp:280:3: error: 'nlocal' not specified in enclosing 'parallel'
  280 |   for (int i = 0; i < nlocal; i++) {
      |   ^~~
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/kspace.cpp:278:9: error: enclosing 'parallel'
  278 | #pragma omp parallel for default(none) reduction(+:qsum_local,qsqsum_local)
      |         ^~~
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/kspace.cpp:281:19: error: 'q' not specified in enclosing 'parallel'
  281 |     qsum_local += q[i];
      |                   ^
/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/kspace.cpp:278:9: error: enclosing 'parallel'
  278 | #pragma omp parallel for default(none) reduction(+:qsum_local,qsqsum_local)
      |         ^~~
make[3]: *** [CMakeFiles/lmp.dir/build.make:2757: CMakeFiles/lmp.dir/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/src/kspace.cpp.o] Error 1
make[3]: *** Waiting for unfinished jobs....
make[3]: Leaving directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build'
make[2]: *** [CMakeFiles/Makefile2:229: CMakeFiles/lmp.dir/all] Error 2
make[2]: Leaving directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build'
make[1]: *** [Makefile:133: all] Error 2
make[1]: Leaving directory '/<<BUILDDIR>>/lammps-0~20181211.gitad1b1897d+dfsg1/debian/build'
dh_auto_build: cd debian/build && make -j4 "INSTALL=install --strip-program=true" returned exit code 2
make: *** [debian/rules:10: build-arch] Error 255
dpkg-buildpackage: error: debian/rules build-arch subprocess returned exit status 2
--------------------------------------------------------------------------------
Build finished at 2019-09-07T09:00:01Z

Finished
--------


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
E: Build failure (dpkg-buildpackage died)

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: armhf
Build-Space: 0
Build-Time: 2955
Distribution: bullseye-staging
Fail-Stage: build
Host Architecture: armhf
Install-Time: 5328
Job: lammps_0~20181211.gitad1b1897d+dfsg1-2
Machine Architecture: armhf
Package: lammps
Package-Time: 8426
Source-Version: 0~20181211.gitad1b1897d+dfsg1-2
Space: 0
Status: failed
Version: 0~20181211.gitad1b1897d+dfsg1-2+b1
--------------------------------------------------------------------------------
Finished at 2019-09-07T09:00:01Z
Build needed 00:00:00, 0k disc space